data_7QDF # _entry.id 7QDF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7QDF pdb_00007qdf 10.2210/pdb7qdf/pdb WWPDB D_1292119282 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-10-19 2 'Structure model' 1 1 2022-11-23 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7QDF _pdbx_database_status.recvd_initial_deposition_date 2021-11-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 3 _pdbx_contact_author.email g.towers@ucl.ac.uk _pdbx_contact_author.name_first Gregory _pdbx_contact_author.name_last Towers _pdbx_contact_author.name_mi J _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7707-0264 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Govasli, M.A.L.' 1 0000-0002-2091-3849 'Pinotsis, N.' 2 0000-0002-5096-257X 'McAlpine-Scott, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Microbiol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2058-5276 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 1762 _citation.page_last 1776 _citation.title 'Evasion of cGAS and TRIM5 defines pandemic HIV.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41564-022-01247-0 _citation.pdbx_database_id_PubMed 36289397 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zuliani-Alvarez, L.' 1 0000-0002-4682-4043 primary 'Govasli, M.L.' 2 ? primary 'Rasaiyaah, J.' 3 ? primary 'Monit, C.' 4 ? primary 'Perry, S.O.' 5 ? primary 'Sumner, R.P.' 6 ? primary 'McAlpine-Scott, S.' 7 ? primary 'Dickson, C.' 8 0000-0002-1972-4143 primary 'Rifat Faysal, K.M.' 9 ? primary 'Hilditch, L.' 10 ? primary 'Miles, R.J.' 11 ? primary 'Bibollet-Ruche, F.' 12 ? primary 'Hahn, B.H.' 13 0000-0002-9400-9887 primary 'Boecking, T.' 14 0000-0003-1165-3122 primary 'Pinotsis, N.' 15 0000-0002-5096-257X primary 'James, L.C.' 16 0000-0003-2131-0334 primary 'Jacques, D.A.' 17 0000-0002-6426-4510 primary 'Towers, G.J.' 18 0000-0002-7707-0264 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Gag polyprotein' 25787.621 1 ? R120 ? ? 2 non-polymer syn 'IODIDE ION' 126.904 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 5 ? ? ? ? 4 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 5 water nat water 18.015 14 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Pr55Gag # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW DRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTRHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKE PFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL ; _entity_poly.pdbx_seq_one_letter_code_can ;PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW DRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTRHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKE PFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL ; _entity_poly.pdbx_strand_id AAA _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 'CHLORIDE ION' CL 4 BETA-MERCAPTOETHANOL BME 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ILE n 1 3 VAL n 1 4 GLN n 1 5 ASN n 1 6 LEU n 1 7 GLN n 1 8 GLY n 1 9 GLN n 1 10 MET n 1 11 VAL n 1 12 HIS n 1 13 GLN n 1 14 ALA n 1 15 ILE n 1 16 SER n 1 17 PRO n 1 18 ARG n 1 19 THR n 1 20 LEU n 1 21 ASN n 1 22 ALA n 1 23 TRP n 1 24 VAL n 1 25 LYS n 1 26 VAL n 1 27 VAL n 1 28 GLU n 1 29 GLU n 1 30 LYS n 1 31 ALA n 1 32 PHE n 1 33 SER n 1 34 PRO n 1 35 GLU n 1 36 VAL n 1 37 ILE n 1 38 PRO n 1 39 MET n 1 40 PHE n 1 41 SER n 1 42 ALA n 1 43 LEU n 1 44 SER n 1 45 GLU n 1 46 GLY n 1 47 ALA n 1 48 THR n 1 49 PRO n 1 50 GLN n 1 51 ASP n 1 52 LEU n 1 53 ASN n 1 54 THR n 1 55 MET n 1 56 LEU n 1 57 ASN n 1 58 THR n 1 59 VAL n 1 60 GLY n 1 61 GLY n 1 62 HIS n 1 63 GLN n 1 64 ALA n 1 65 ALA n 1 66 MET n 1 67 GLN n 1 68 MET n 1 69 LEU n 1 70 LYS n 1 71 GLU n 1 72 THR n 1 73 ILE n 1 74 ASN n 1 75 GLU n 1 76 GLU n 1 77 ALA n 1 78 ALA n 1 79 GLU n 1 80 TRP n 1 81 ASP n 1 82 ARG n 1 83 LEU n 1 84 HIS n 1 85 PRO n 1 86 VAL n 1 87 HIS n 1 88 ALA n 1 89 GLY n 1 90 PRO n 1 91 ILE n 1 92 ALA n 1 93 PRO n 1 94 GLY n 1 95 GLN n 1 96 MET n 1 97 ARG n 1 98 GLU n 1 99 PRO n 1 100 ARG n 1 101 GLY n 1 102 SER n 1 103 ASP n 1 104 ILE n 1 105 ALA n 1 106 GLY n 1 107 THR n 1 108 THR n 1 109 SER n 1 110 THR n 1 111 LEU n 1 112 GLN n 1 113 GLU n 1 114 GLN n 1 115 ILE n 1 116 GLY n 1 117 TRP n 1 118 MET n 1 119 THR n 1 120 ARG n 1 121 HIS n 1 122 ASN n 1 123 PRO n 1 124 PRO n 1 125 ILE n 1 126 PRO n 1 127 VAL n 1 128 GLY n 1 129 GLU n 1 130 ILE n 1 131 TYR n 1 132 LYS n 1 133 ARG n 1 134 TRP n 1 135 ILE n 1 136 ILE n 1 137 LEU n 1 138 GLY n 1 139 LEU n 1 140 ASN n 1 141 LYS n 1 142 ILE n 1 143 VAL n 1 144 ARG n 1 145 MET n 1 146 TYR n 1 147 SER n 1 148 PRO n 1 149 THR n 1 150 SER n 1 151 ILE n 1 152 LEU n 1 153 ASP n 1 154 ILE n 1 155 ARG n 1 156 GLN n 1 157 GLY n 1 158 PRO n 1 159 LYS n 1 160 GLU n 1 161 PRO n 1 162 PHE n 1 163 ARG n 1 164 ASP n 1 165 TYR n 1 166 VAL n 1 167 ASP n 1 168 ARG n 1 169 PHE n 1 170 TYR n 1 171 LYS n 1 172 THR n 1 173 LEU n 1 174 ARG n 1 175 ALA n 1 176 GLU n 1 177 GLN n 1 178 ALA n 1 179 SER n 1 180 GLN n 1 181 GLU n 1 182 VAL n 1 183 LYS n 1 184 ASN n 1 185 TRP n 1 186 MET n 1 187 THR n 1 188 GLU n 1 189 THR n 1 190 LEU n 1 191 LEU n 1 192 VAL n 1 193 GLN n 1 194 ASN n 1 195 ALA n 1 196 ASN n 1 197 PRO n 1 198 ASP n 1 199 CYS n 1 200 LYS n 1 201 THR n 1 202 ILE n 1 203 LEU n 1 204 LYS n 1 205 ALA n 1 206 LEU n 1 207 GLY n 1 208 PRO n 1 209 GLY n 1 210 ALA n 1 211 THR n 1 212 LEU n 1 213 GLU n 1 214 GLU n 1 215 MET n 1 216 MET n 1 217 THR n 1 218 ALA n 1 219 CYS n 1 220 GLN n 1 221 GLY n 1 222 VAL n 1 223 GLY n 1 224 GLY n 1 225 PRO n 1 226 GLY n 1 227 HIS n 1 228 LYS n 1 229 ALA n 1 230 ARG n 1 231 VAL n 1 232 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 232 _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'isolate NY5' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus type 1 group M subtype B (isolate NY5)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11698 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant C41 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO AAA . n A 1 2 ILE 2 2 2 ILE ILE AAA . n A 1 3 VAL 3 3 3 VAL VAL AAA . n A 1 4 GLN 4 4 4 GLN GLN AAA . n A 1 5 ASN 5 5 5 ASN ASN AAA . n A 1 6 LEU 6 6 6 LEU LEU AAA . n A 1 7 GLN 7 7 7 GLN GLN AAA . n A 1 8 GLY 8 8 8 GLY GLY AAA . n A 1 9 GLN 9 9 9 GLN GLN AAA . n A 1 10 MET 10 10 10 MET MET AAA . n A 1 11 VAL 11 11 11 VAL VAL AAA . n A 1 12 HIS 12 12 12 HIS HIS AAA . n A 1 13 GLN 13 13 13 GLN GLN AAA . n A 1 14 ALA 14 14 14 ALA ALA AAA . n A 1 15 ILE 15 15 15 ILE ILE AAA . n A 1 16 SER 16 16 16 SER SER AAA . n A 1 17 PRO 17 17 17 PRO PRO AAA . n A 1 18 ARG 18 18 18 ARG ARG AAA . n A 1 19 THR 19 19 19 THR THR AAA . n A 1 20 LEU 20 20 20 LEU LEU AAA . n A 1 21 ASN 21 21 21 ASN ASN AAA . n A 1 22 ALA 22 22 22 ALA ALA AAA . n A 1 23 TRP 23 23 23 TRP TRP AAA . n A 1 24 VAL 24 24 24 VAL VAL AAA . n A 1 25 LYS 25 25 25 LYS LYS AAA . n A 1 26 VAL 26 26 26 VAL VAL AAA . n A 1 27 VAL 27 27 27 VAL VAL AAA . n A 1 28 GLU 28 28 28 GLU GLU AAA . n A 1 29 GLU 29 29 29 GLU GLU AAA . n A 1 30 LYS 30 30 30 LYS LYS AAA . n A 1 31 ALA 31 31 31 ALA ALA AAA . n A 1 32 PHE 32 32 32 PHE PHE AAA . n A 1 33 SER 33 33 33 SER SER AAA . n A 1 34 PRO 34 34 34 PRO PRO AAA . n A 1 35 GLU 35 35 35 GLU GLU AAA . n A 1 36 VAL 36 36 36 VAL VAL AAA . n A 1 37 ILE 37 37 37 ILE ILE AAA . n A 1 38 PRO 38 38 38 PRO PRO AAA . n A 1 39 MET 39 39 39 MET MET AAA . n A 1 40 PHE 40 40 40 PHE PHE AAA . n A 1 41 SER 41 41 41 SER SER AAA . n A 1 42 ALA 42 42 42 ALA ALA AAA . n A 1 43 LEU 43 43 43 LEU LEU AAA . n A 1 44 SER 44 44 44 SER SER AAA . n A 1 45 GLU 45 45 45 GLU GLU AAA . n A 1 46 GLY 46 46 46 GLY GLY AAA . n A 1 47 ALA 47 47 47 ALA ALA AAA . n A 1 48 THR 48 48 48 THR THR AAA . n A 1 49 PRO 49 49 49 PRO PRO AAA . n A 1 50 GLN 50 50 50 GLN GLN AAA . n A 1 51 ASP 51 51 51 ASP ASP AAA . n A 1 52 LEU 52 52 52 LEU LEU AAA . n A 1 53 ASN 53 53 53 ASN ASN AAA . n A 1 54 THR 54 54 54 THR THR AAA . n A 1 55 MET 55 55 55 MET MET AAA . n A 1 56 LEU 56 56 56 LEU LEU AAA . n A 1 57 ASN 57 57 57 ASN ASN AAA . n A 1 58 THR 58 58 58 THR THR AAA . n A 1 59 VAL 59 59 59 VAL VAL AAA . n A 1 60 GLY 60 60 60 GLY GLY AAA . n A 1 61 GLY 61 61 61 GLY GLY AAA . n A 1 62 HIS 62 62 62 HIS HIS AAA . n A 1 63 GLN 63 63 63 GLN GLN AAA . n A 1 64 ALA 64 64 64 ALA ALA AAA . n A 1 65 ALA 65 65 65 ALA ALA AAA . n A 1 66 MET 66 66 66 MET MET AAA . n A 1 67 GLN 67 67 67 GLN GLN AAA . n A 1 68 MET 68 68 68 MET MET AAA . n A 1 69 LEU 69 69 69 LEU LEU AAA . n A 1 70 LYS 70 70 70 LYS LYS AAA . n A 1 71 GLU 71 71 71 GLU GLU AAA . n A 1 72 THR 72 72 72 THR THR AAA . n A 1 73 ILE 73 73 73 ILE ILE AAA . n A 1 74 ASN 74 74 74 ASN ASN AAA . n A 1 75 GLU 75 75 75 GLU GLU AAA . n A 1 76 GLU 76 76 76 GLU GLU AAA . n A 1 77 ALA 77 77 77 ALA ALA AAA . n A 1 78 ALA 78 78 78 ALA ALA AAA . n A 1 79 GLU 79 79 79 GLU GLU AAA . n A 1 80 TRP 80 80 80 TRP TRP AAA . n A 1 81 ASP 81 81 81 ASP ASP AAA . n A 1 82 ARG 82 82 82 ARG ARG AAA . n A 1 83 LEU 83 83 83 LEU LEU AAA . n A 1 84 HIS 84 84 84 HIS HIS AAA . n A 1 85 PRO 85 85 85 PRO PRO AAA . n A 1 86 VAL 86 86 86 VAL VAL AAA . n A 1 87 HIS 87 87 87 HIS HIS AAA . n A 1 88 ALA 88 88 88 ALA ALA AAA . n A 1 89 GLY 89 89 89 GLY GLY AAA . n A 1 90 PRO 90 90 90 PRO PRO AAA . n A 1 91 ILE 91 91 91 ILE ILE AAA . n A 1 92 ALA 92 92 92 ALA ALA AAA . n A 1 93 PRO 93 93 93 PRO PRO AAA . n A 1 94 GLY 94 94 94 GLY GLY AAA . n A 1 95 GLN 95 95 95 GLN GLN AAA . n A 1 96 MET 96 96 96 MET MET AAA . n A 1 97 ARG 97 97 97 ARG ARG AAA . n A 1 98 GLU 98 98 98 GLU GLU AAA . n A 1 99 PRO 99 99 99 PRO PRO AAA . n A 1 100 ARG 100 100 100 ARG ARG AAA . n A 1 101 GLY 101 101 101 GLY GLY AAA . n A 1 102 SER 102 102 102 SER SER AAA . n A 1 103 ASP 103 103 103 ASP ASP AAA . n A 1 104 ILE 104 104 104 ILE ILE AAA . n A 1 105 ALA 105 105 105 ALA ALA AAA . n A 1 106 GLY 106 106 106 GLY GLY AAA . n A 1 107 THR 107 107 107 THR THR AAA . n A 1 108 THR 108 108 108 THR THR AAA . n A 1 109 SER 109 109 109 SER SER AAA . n A 1 110 THR 110 110 110 THR THR AAA . n A 1 111 LEU 111 111 111 LEU LEU AAA . n A 1 112 GLN 112 112 112 GLN GLN AAA . n A 1 113 GLU 113 113 113 GLU GLU AAA . n A 1 114 GLN 114 114 114 GLN GLN AAA . n A 1 115 ILE 115 115 115 ILE ILE AAA . n A 1 116 GLY 116 116 116 GLY GLY AAA . n A 1 117 TRP 117 117 117 TRP TRP AAA . n A 1 118 MET 118 118 118 MET MET AAA . n A 1 119 THR 119 119 119 THR THR AAA . n A 1 120 ARG 120 120 120 ARG ARG AAA . n A 1 121 HIS 121 121 121 HIS ALA AAA . n A 1 122 ASN 122 122 122 ASN ASN AAA . n A 1 123 PRO 123 123 123 PRO PRO AAA . n A 1 124 PRO 124 124 124 PRO PRO AAA . n A 1 125 ILE 125 125 125 ILE ILE AAA . n A 1 126 PRO 126 126 126 PRO PRO AAA . n A 1 127 VAL 127 127 127 VAL VAL AAA . n A 1 128 GLY 128 128 128 GLY GLY AAA . n A 1 129 GLU 129 129 129 GLU GLU AAA . n A 1 130 ILE 130 130 130 ILE ILE AAA . n A 1 131 TYR 131 131 131 TYR TYR AAA . n A 1 132 LYS 132 132 132 LYS LYS AAA . n A 1 133 ARG 133 133 133 ARG ARG AAA . n A 1 134 TRP 134 134 134 TRP TRP AAA . n A 1 135 ILE 135 135 135 ILE ILE AAA . n A 1 136 ILE 136 136 136 ILE ILE AAA . n A 1 137 LEU 137 137 137 LEU LEU AAA . n A 1 138 GLY 138 138 138 GLY GLY AAA . n A 1 139 LEU 139 139 139 LEU LEU AAA . n A 1 140 ASN 140 140 140 ASN ASN AAA . n A 1 141 LYS 141 141 141 LYS LYS AAA . n A 1 142 ILE 142 142 142 ILE ILE AAA . n A 1 143 VAL 143 143 143 VAL VAL AAA . n A 1 144 ARG 144 144 144 ARG ARG AAA . n A 1 145 MET 145 145 145 MET MET AAA . n A 1 146 TYR 146 146 146 TYR TYR AAA . n A 1 147 SER 147 147 147 SER SER AAA . n A 1 148 PRO 148 148 148 PRO PRO AAA . n A 1 149 THR 149 149 149 THR THR AAA . n A 1 150 SER 150 150 150 SER SER AAA . n A 1 151 ILE 151 151 151 ILE ILE AAA . n A 1 152 LEU 152 152 152 LEU LEU AAA . n A 1 153 ASP 153 153 153 ASP ASP AAA . n A 1 154 ILE 154 154 154 ILE ILE AAA . n A 1 155 ARG 155 155 155 ARG ARG AAA . n A 1 156 GLN 156 156 156 GLN GLN AAA . n A 1 157 GLY 157 157 157 GLY GLY AAA . n A 1 158 PRO 158 158 158 PRO PRO AAA . n A 1 159 LYS 159 159 159 LYS LYS AAA . n A 1 160 GLU 160 160 160 GLU GLU AAA . n A 1 161 PRO 161 161 161 PRO PRO AAA . n A 1 162 PHE 162 162 162 PHE PHE AAA . n A 1 163 ARG 163 163 163 ARG ARG AAA . n A 1 164 ASP 164 164 164 ASP ASP AAA . n A 1 165 TYR 165 165 165 TYR TYR AAA . n A 1 166 VAL 166 166 166 VAL VAL AAA . n A 1 167 ASP 167 167 167 ASP ASP AAA . n A 1 168 ARG 168 168 168 ARG ARG AAA . n A 1 169 PHE 169 169 169 PHE PHE AAA . n A 1 170 TYR 170 170 170 TYR TYR AAA . n A 1 171 LYS 171 171 171 LYS LYS AAA . n A 1 172 THR 172 172 172 THR THR AAA . n A 1 173 LEU 173 173 173 LEU LEU AAA . n A 1 174 ARG 174 174 174 ARG ARG AAA . n A 1 175 ALA 175 175 175 ALA ALA AAA . n A 1 176 GLU 176 176 176 GLU GLU AAA . n A 1 177 GLN 177 177 177 GLN GLN AAA . n A 1 178 ALA 178 178 178 ALA ALA AAA . n A 1 179 SER 179 179 179 SER SER AAA . n A 1 180 GLN 180 180 180 GLN GLN AAA . n A 1 181 GLU 181 181 181 GLU GLU AAA . n A 1 182 VAL 182 182 182 VAL VAL AAA . n A 1 183 LYS 183 183 183 LYS LYS AAA . n A 1 184 ASN 184 184 184 ASN ASN AAA . n A 1 185 TRP 185 185 185 TRP TRP AAA . n A 1 186 MET 186 186 186 MET MET AAA . n A 1 187 THR 187 187 187 THR THR AAA . n A 1 188 GLU 188 188 188 GLU GLU AAA . n A 1 189 THR 189 189 189 THR THR AAA . n A 1 190 LEU 190 190 190 LEU LEU AAA . n A 1 191 LEU 191 191 191 LEU LEU AAA . n A 1 192 VAL 192 192 192 VAL VAL AAA . n A 1 193 GLN 193 193 193 GLN GLN AAA . n A 1 194 ASN 194 194 194 ASN ASN AAA . n A 1 195 ALA 195 195 195 ALA ALA AAA . n A 1 196 ASN 196 196 196 ASN ASN AAA . n A 1 197 PRO 197 197 197 PRO PRO AAA . n A 1 198 ASP 198 198 198 ASP ASP AAA . n A 1 199 CYS 199 199 199 CYS CYS AAA . n A 1 200 LYS 200 200 200 LYS LYS AAA . n A 1 201 THR 201 201 201 THR THR AAA . n A 1 202 ILE 202 202 202 ILE ILE AAA . n A 1 203 LEU 203 203 203 LEU LEU AAA . n A 1 204 LYS 204 204 204 LYS LYS AAA . n A 1 205 ALA 205 205 205 ALA ALA AAA . n A 1 206 LEU 206 206 206 LEU LEU AAA . n A 1 207 GLY 207 207 207 GLY GLY AAA . n A 1 208 PRO 208 208 208 PRO PRO AAA . n A 1 209 GLY 209 209 209 GLY GLY AAA . n A 1 210 ALA 210 210 210 ALA ALA AAA . n A 1 211 THR 211 211 211 THR THR AAA . n A 1 212 LEU 212 212 212 LEU LEU AAA . n A 1 213 GLU 213 213 213 GLU GLU AAA . n A 1 214 GLU 214 214 214 GLU GLU AAA . n A 1 215 MET 215 215 215 MET MET AAA . n A 1 216 MET 216 216 216 MET MET AAA . n A 1 217 THR 217 217 217 THR THR AAA . n A 1 218 ALA 218 218 218 ALA ALA AAA . n A 1 219 CYS 219 219 219 CYS CYS AAA . n A 1 220 GLN 220 220 220 GLN GLN AAA . n A 1 221 GLY 221 221 221 GLY GLY AAA . n A 1 222 VAL 222 222 222 VAL VAL AAA . n A 1 223 GLY 223 223 ? ? ? AAA . n A 1 224 GLY 224 224 ? ? ? AAA . n A 1 225 PRO 225 225 ? ? ? AAA . n A 1 226 GLY 226 226 ? ? ? AAA . n A 1 227 HIS 227 227 ? ? ? AAA . n A 1 228 LYS 228 228 ? ? ? AAA . n A 1 229 ALA 229 229 ? ? ? AAA . n A 1 230 ARG 230 230 ? ? ? AAA . n A 1 231 VAL 231 231 ? ? ? AAA . n A 1 232 LEU 232 232 ? ? ? AAA . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 301 301 IOD IOD AAA . C 2 IOD 1 302 302 IOD IOD AAA . D 3 CL 1 303 303 CL CL AAA . E 3 CL 1 304 304 CL CL AAA . F 3 CL 1 305 305 CL CL AAA . G 3 CL 1 306 306 CL CL AAA . H 3 CL 1 307 307 CL CL AAA . I 4 BME 1 308 501 BME BME AAA . J 5 HOH 1 401 14 HOH HOH AAA . J 5 HOH 2 402 12 HOH HOH AAA . J 5 HOH 3 403 2 HOH HOH AAA . J 5 HOH 4 404 3 HOH HOH AAA . J 5 HOH 5 405 11 HOH HOH AAA . J 5 HOH 6 406 13 HOH HOH AAA . J 5 HOH 7 407 5 HOH HOH AAA . J 5 HOH 8 408 7 HOH HOH AAA . J 5 HOH 9 409 1 HOH HOH AAA . J 5 HOH 10 410 6 HOH HOH AAA . J 5 HOH 11 411 4 HOH HOH AAA . J 5 HOH 12 412 10 HOH HOH AAA . J 5 HOH 13 413 9 HOH HOH AAA . J 5 HOH 14 414 8 HOH HOH AAA . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 AAA GLN 4 ? CG ? A GLN 4 CG 2 1 Y 1 AAA GLN 4 ? CD ? A GLN 4 CD 3 1 Y 1 AAA GLN 4 ? OE1 ? A GLN 4 OE1 4 1 Y 1 AAA GLN 4 ? NE2 ? A GLN 4 NE2 5 1 Y 1 AAA GLN 7 ? CG ? A GLN 7 CG 6 1 Y 1 AAA GLN 7 ? CD ? A GLN 7 CD 7 1 Y 1 AAA GLN 7 ? OE1 ? A GLN 7 OE1 8 1 Y 1 AAA GLN 7 ? NE2 ? A GLN 7 NE2 9 1 Y 1 AAA HIS 121 ? CG ? A HIS 121 CG 10 1 Y 1 AAA HIS 121 ? ND1 ? A HIS 121 ND1 11 1 Y 1 AAA HIS 121 ? CD2 ? A HIS 121 CD2 12 1 Y 1 AAA HIS 121 ? CE1 ? A HIS 121 CE1 13 1 Y 1 AAA HIS 121 ? NE2 ? A HIS 121 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7QDF _cell.details ? _cell.formula_units_Z ? _cell.length_a 92.360 _cell.length_a_esd ? _cell.length_b 92.360 _cell.length_b_esd ? _cell.length_c 57.440 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QDF _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7QDF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.23 _exptl_crystal.description 'hexagonal plates' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;9.5% PEG 3350 (v/v), 310 mM NaI, 100 mM Sodium Cacodylate. Crystals grew in 1 uL protein (3 mg/mL) + 1 uL crystallant. Cryoprotected in 20% (v/v) Glycerol. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER R 4M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-10-31 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0332 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0332 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7QDF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.304 _reflns.d_resolution_low 79.98 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12346 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.40 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.76 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.071 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.304 _reflns_shell.d_res_low 2.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1951 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.503 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -5.699 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] -5.699 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] 11.398 _refine.B_iso_max ? _refine.B_iso_mean 93.332 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.details 'Hydrogens have not been used' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7QDF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.304 _refine.ls_d_res_low 46.656 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12276 _refine.ls_number_reflns_R_free 578 _refine.ls_number_reflns_R_work 11698 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.397 _refine.ls_percent_reflns_R_free 4.708 _refine.ls_R_factor_all 0.244 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2775 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2423 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL PLUS MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4XFX _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.075 _refine.pdbx_overall_ESU_R_Free 0.054 _refine.pdbx_solvent_vdw_probe_radii 1.000 _refine.pdbx_solvent_ion_probe_radii 0.900 _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 16.695 _refine.overall_SU_ML 0.240 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1723 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 1748 _refine_hist.d_res_high 2.304 _refine_hist.d_res_low 46.656 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.012 1791 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 2.017 1.646 2437 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.430 5.000 227 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.959 23.068 88 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 20.023 15.000 310 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 24.062 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.141 0.200 241 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.020 1357 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.301 0.200 883 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.331 0.200 1252 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.235 0.200 50 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.405 0.200 80 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.449 0.200 4 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 6.147 7.436 902 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 8.903 11.120 1131 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 6.813 7.472 889 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 9.558 11.110 1306 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 14.589 135.578 7519 ? r_lrange_it ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.304 2.364 . . 34 875 99.2358 . . . 0.408 . 0.321 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.364 2.429 . . 41 835 99.5454 . . . 0.377 . 0.291 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.429 2.499 . . 41 838 99.8864 . . . 0.315 . 0.309 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.499 2.576 . . 42 786 99.3998 . . . 0.301 . 0.329 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.576 2.660 . . 43 762 99.8759 . . . 0.313 . 0.342 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.660 2.753 . . 37 756 99.7484 . . . 0.359 . 0.336 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.753 2.856 . . 21 733 99.3412 . . . 0.357 . 0.309 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.856 2.973 . . 34 696 99.5907 . . . 0.375 . 0.306 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.973 3.104 . . 34 671 98.8780 . . . 0.346 . 0.294 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.104 3.255 . . 26 637 98.5141 . . . 0.416 . 0.305 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.255 3.430 . . 30 608 98.7616 . . . 0.282 . 0.286 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.430 3.637 . . 28 572 98.3606 . . . 0.293 . 0.269 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.637 3.886 . . 28 537 98.2609 . . . 0.285 . 0.235 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.886 4.195 . . 23 500 97.0315 . . . 0.328 . 0.219 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.195 4.592 . . 26 451 97.1487 . . . 0.224 . 0.185 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.592 5.128 . . 23 411 97.0917 . . . 0.192 . 0.221 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.128 5.909 . . 23 360 96.7172 . . . 0.329 . 0.228 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.909 7.208 . . 24 305 94.2693 . . . 0.169 . 0.208 . . . . . . . . . . . 'X-RAY DIFFRACTION' 7.208 10.075 . . 12 232 91.3858 . . . 0.196 . 0.173 . . . . . . . . . . . 'X-RAY DIFFRACTION' 10.075 46.656 . . 8 133 83.9286 . . . 0.333 . 0.214 . . . . . . . . . . . # _struct.entry_id 7QDF _struct.title 'Hexameric HIV-1 (M-group) CA R120 mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7QDF _struct_keywords.text 'HIV-1 CAPSID PROTEIN, HEXAMER, R120 MUTANT, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GAG_HV1N5 _struct_ref.pdbx_db_accession P12493 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW DRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEP FRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVL ; _struct_ref.pdbx_align_begin 133 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7QDF _struct_ref_seq.pdbx_strand_id AAA _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P12493 _struct_ref_seq.db_align_beg 133 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 363 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 232 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7QDF _struct_ref_seq_dif.mon_id ARG _struct_ref_seq_dif.pdbx_pdb_strand_id AAA _struct_ref_seq_dif.seq_num 120 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P12493 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details insertion _struct_ref_seq_dif.pdbx_auth_seq_num 120 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 23930 ? 1 MORE -469 ? 1 'SSA (A^2)' 63850 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 16 ? ALA A 31 ? SER AAA 16 ALA AAA 31 1 ? 16 HELX_P HELX_P2 AA2 GLU A 35 ? SER A 44 ? GLU AAA 35 SER AAA 44 1 ? 10 HELX_P HELX_P3 AA3 THR A 48 ? THR A 58 ? THR AAA 48 THR AAA 58 1 ? 11 HELX_P HELX_P4 AA4 HIS A 62 ? HIS A 84 ? HIS AAA 62 HIS AAA 84 1 ? 23 HELX_P HELX_P5 AA5 ARG A 100 ? ALA A 105 ? ARG AAA 100 ALA AAA 105 1 ? 6 HELX_P HELX_P6 AA6 THR A 110 ? ARG A 120 ? THR AAA 110 ARG AAA 120 1 ? 11 HELX_P HELX_P7 AA7 PRO A 126 ? SER A 147 ? PRO AAA 126 SER AAA 147 1 ? 22 HELX_P HELX_P8 AA8 SER A 150 ? ILE A 154 ? SER AAA 150 ILE AAA 154 5 ? 5 HELX_P HELX_P9 AA9 PRO A 161 ? ALA A 175 ? PRO AAA 161 ALA AAA 175 1 ? 15 HELX_P HELX_P10 AB1 SER A 179 ? ASN A 194 ? SER AAA 179 ASN AAA 194 1 ? 16 HELX_P HELX_P11 AB2 ASN A 196 ? ALA A 205 ? ASN AAA 196 ALA AAA 205 1 ? 10 HELX_P HELX_P12 AB3 THR A 211 ? GLN A 220 ? THR AAA 211 GLN AAA 220 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 2 ? VAL A 3 ? ILE AAA 2 VAL AAA 3 AA1 2 VAL A 11 ? HIS A 12 ? VAL AAA 11 HIS AAA 12 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id VAL _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 3 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_1_auth_asym_id AAA _pdbx_struct_sheet_hbond.range_1_auth_seq_id 3 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 11 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id AAA _pdbx_struct_sheet_hbond.range_2_auth_seq_id 11 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 CL _pdbx_validate_close_contact.auth_asym_id_1 AAA _pdbx_validate_close_contact.auth_comp_id_1 CL _pdbx_validate_close_contact.auth_seq_id_1 306 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 AAA _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 410 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 AAA _pdbx_validate_symm_contact.auth_comp_id_1 GLN _pdbx_validate_symm_contact.auth_seq_id_1 63 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 B _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 AAA _pdbx_validate_symm_contact.auth_comp_id_2 ASP _pdbx_validate_symm_contact.auth_seq_id_2 167 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_555 _pdbx_validate_symm_contact.dist 1.81 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB AAA GLN 63 ? A CA AAA GLN 63 ? A C AAA GLN 63 ? A 122.77 110.40 12.37 2.00 N 2 1 NE AAA ARG 174 ? ? CZ AAA ARG 174 ? ? NH2 AAA ARG 174 ? ? 112.39 120.30 -7.91 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN AAA 7 ? ? -166.38 -10.16 2 1 ALA AAA 31 ? ? 60.96 -117.75 3 1 ARG AAA 120 ? ? 63.06 -141.91 4 1 HIS AAA 121 ? ? -126.07 -83.75 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 11.9824 -8.1146 -3.0845 0.0370 ? -0.0176 ? -0.0646 ? 0.0716 ? -0.0056 ? 0.5031 ? 0.8419 ? -0.8455 ? 1.7146 ? 3.0242 ? -2.7489 ? 4.0214 ? 0.0188 ? 0.1248 ? 0.2241 ? -0.1680 ? -0.2493 ? 0.4686 ? 0.0788 ? 0.3317 ? 0.2305 ? 2 'X-RAY DIFFRACTION' ? refined 27.7638 -11.3065 -8.5127 0.0733 ? 0.0162 ? -0.0026 ? 0.1230 ? -0.0239 ? 0.2055 ? 1.8459 ? -1.0512 ? -0.2364 ? 1.2063 ? -0.3704 ? 3.0111 ? 0.1209 ? 0.2046 ? -0.1234 ? -0.1121 ? -0.3480 ? 0.1807 ? 0.1011 ? 0.2017 ? 0.2271 ? 3 'X-RAY DIFFRACTION' ? refined 22.5353 -6.9005 -19.7465 0.3513 ? -0.0483 ? 0.1014 ? 0.5787 ? -0.2193 ? 0.3878 ? 1.0904 ? 2.4814 ? 2.1888 ? 6.9514 ? 6.6911 ? 6.6754 ? -0.2739 ? 0.2966 ? -0.1917 ? -0.6434 ? -0.0374 ? 0.0816 ? -0.4617 ? -0.3509 ? 0.3112 ? 4 'X-RAY DIFFRACTION' ? refined 14.2172 -32.7127 9.1639 0.2066 ? 0.0609 ? 0.0531 ? 0.1100 ? -0.0152 ? 0.1861 ? 1.7890 ? 1.5924 ? -1.5579 ? 1.6510 ? -1.5550 ? 2.4388 ? -0.0114 ? -0.1787 ? -0.0995 ? -0.0072 ? -0.0506 ? -0.0666 ? 0.2731 ? 0.2588 ? 0.0620 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? AAA 1 ? ? ? AAA 36 ? ALL ? 2 'X-RAY DIFFRACTION' 2 ? ? AAA 37 ? ? ? AAA 110 ? ALL ? 3 'X-RAY DIFFRACTION' 3 ? ? AAA 111 ? ? ? AAA 121 ? ALL ? 4 'X-RAY DIFFRACTION' 4 ? ? AAA 122 ? ? ? AAA 222 ? ALL ? # _pdbx_entry_details.entry_id 7QDF _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 AAA GLY 223 ? A GLY 223 2 1 Y 1 AAA GLY 224 ? A GLY 224 3 1 Y 1 AAA PRO 225 ? A PRO 225 4 1 Y 1 AAA GLY 226 ? A GLY 226 5 1 Y 1 AAA HIS 227 ? A HIS 227 6 1 Y 1 AAA LYS 228 ? A LYS 228 7 1 Y 1 AAA ALA 229 ? A ALA 229 8 1 Y 1 AAA ARG 230 ? A ARG 230 9 1 Y 1 AAA VAL 231 ? A VAL 231 10 1 Y 1 AAA LEU 232 ? A LEU 232 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BME C1 C N N 74 BME C2 C N N 75 BME O1 O N N 76 BME S2 S N N 77 BME H11 H N N 78 BME H12 H N N 79 BME H21 H N N 80 BME H22 H N N 81 BME HO1 H N N 82 BME HS2 H N N 83 CL CL CL N N 84 CYS N N N N 85 CYS CA C N R 86 CYS C C N N 87 CYS O O N N 88 CYS CB C N N 89 CYS SG S N N 90 CYS OXT O N N 91 CYS H H N N 92 CYS H2 H N N 93 CYS HA H N N 94 CYS HB2 H N N 95 CYS HB3 H N N 96 CYS HG H N N 97 CYS HXT H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HIS N N N N 148 HIS CA C N S 149 HIS C C N N 150 HIS O O N N 151 HIS CB C N N 152 HIS CG C Y N 153 HIS ND1 N Y N 154 HIS CD2 C Y N 155 HIS CE1 C Y N 156 HIS NE2 N Y N 157 HIS OXT O N N 158 HIS H H N N 159 HIS H2 H N N 160 HIS HA H N N 161 HIS HB2 H N N 162 HIS HB3 H N N 163 HIS HD1 H N N 164 HIS HD2 H N N 165 HIS HE1 H N N 166 HIS HE2 H N N 167 HIS HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 IOD I I N N 194 LEU N N N N 195 LEU CA C N S 196 LEU C C N N 197 LEU O O N N 198 LEU CB C N N 199 LEU CG C N N 200 LEU CD1 C N N 201 LEU CD2 C N N 202 LEU OXT O N N 203 LEU H H N N 204 LEU H2 H N N 205 LEU HA H N N 206 LEU HB2 H N N 207 LEU HB3 H N N 208 LEU HG H N N 209 LEU HD11 H N N 210 LEU HD12 H N N 211 LEU HD13 H N N 212 LEU HD21 H N N 213 LEU HD22 H N N 214 LEU HD23 H N N 215 LEU HXT H N N 216 LYS N N N N 217 LYS CA C N S 218 LYS C C N N 219 LYS O O N N 220 LYS CB C N N 221 LYS CG C N N 222 LYS CD C N N 223 LYS CE C N N 224 LYS NZ N N N 225 LYS OXT O N N 226 LYS H H N N 227 LYS H2 H N N 228 LYS HA H N N 229 LYS HB2 H N N 230 LYS HB3 H N N 231 LYS HG2 H N N 232 LYS HG3 H N N 233 LYS HD2 H N N 234 LYS HD3 H N N 235 LYS HE2 H N N 236 LYS HE3 H N N 237 LYS HZ1 H N N 238 LYS HZ2 H N N 239 LYS HZ3 H N N 240 LYS HXT H N N 241 MET N N N N 242 MET CA C N S 243 MET C C N N 244 MET O O N N 245 MET CB C N N 246 MET CG C N N 247 MET SD S N N 248 MET CE C N N 249 MET OXT O N N 250 MET H H N N 251 MET H2 H N N 252 MET HA H N N 253 MET HB2 H N N 254 MET HB3 H N N 255 MET HG2 H N N 256 MET HG3 H N N 257 MET HE1 H N N 258 MET HE2 H N N 259 MET HE3 H N N 260 MET HXT H N N 261 PHE N N N N 262 PHE CA C N S 263 PHE C C N N 264 PHE O O N N 265 PHE CB C N N 266 PHE CG C Y N 267 PHE CD1 C Y N 268 PHE CD2 C Y N 269 PHE CE1 C Y N 270 PHE CE2 C Y N 271 PHE CZ C Y N 272 PHE OXT O N N 273 PHE H H N N 274 PHE H2 H N N 275 PHE HA H N N 276 PHE HB2 H N N 277 PHE HB3 H N N 278 PHE HD1 H N N 279 PHE HD2 H N N 280 PHE HE1 H N N 281 PHE HE2 H N N 282 PHE HZ H N N 283 PHE HXT H N N 284 PRO N N N N 285 PRO CA C N S 286 PRO C C N N 287 PRO O O N N 288 PRO CB C N N 289 PRO CG C N N 290 PRO CD C N N 291 PRO OXT O N N 292 PRO H H N N 293 PRO HA H N N 294 PRO HB2 H N N 295 PRO HB3 H N N 296 PRO HG2 H N N 297 PRO HG3 H N N 298 PRO HD2 H N N 299 PRO HD3 H N N 300 PRO HXT H N N 301 SER N N N N 302 SER CA C N S 303 SER C C N N 304 SER O O N N 305 SER CB C N N 306 SER OG O N N 307 SER OXT O N N 308 SER H H N N 309 SER H2 H N N 310 SER HA H N N 311 SER HB2 H N N 312 SER HB3 H N N 313 SER HG H N N 314 SER HXT H N N 315 THR N N N N 316 THR CA C N S 317 THR C C N N 318 THR O O N N 319 THR CB C N R 320 THR OG1 O N N 321 THR CG2 C N N 322 THR OXT O N N 323 THR H H N N 324 THR H2 H N N 325 THR HA H N N 326 THR HB H N N 327 THR HG1 H N N 328 THR HG21 H N N 329 THR HG22 H N N 330 THR HG23 H N N 331 THR HXT H N N 332 TRP N N N N 333 TRP CA C N S 334 TRP C C N N 335 TRP O O N N 336 TRP CB C N N 337 TRP CG C Y N 338 TRP CD1 C Y N 339 TRP CD2 C Y N 340 TRP NE1 N Y N 341 TRP CE2 C Y N 342 TRP CE3 C Y N 343 TRP CZ2 C Y N 344 TRP CZ3 C Y N 345 TRP CH2 C Y N 346 TRP OXT O N N 347 TRP H H N N 348 TRP H2 H N N 349 TRP HA H N N 350 TRP HB2 H N N 351 TRP HB3 H N N 352 TRP HD1 H N N 353 TRP HE1 H N N 354 TRP HE3 H N N 355 TRP HZ2 H N N 356 TRP HZ3 H N N 357 TRP HH2 H N N 358 TRP HXT H N N 359 TYR N N N N 360 TYR CA C N S 361 TYR C C N N 362 TYR O O N N 363 TYR CB C N N 364 TYR CG C Y N 365 TYR CD1 C Y N 366 TYR CD2 C Y N 367 TYR CE1 C Y N 368 TYR CE2 C Y N 369 TYR CZ C Y N 370 TYR OH O N N 371 TYR OXT O N N 372 TYR H H N N 373 TYR H2 H N N 374 TYR HA H N N 375 TYR HB2 H N N 376 TYR HB3 H N N 377 TYR HD1 H N N 378 TYR HD2 H N N 379 TYR HE1 H N N 380 TYR HE2 H N N 381 TYR HH H N N 382 TYR HXT H N N 383 VAL N N N N 384 VAL CA C N S 385 VAL C C N N 386 VAL O O N N 387 VAL CB C N N 388 VAL CG1 C N N 389 VAL CG2 C N N 390 VAL OXT O N N 391 VAL H H N N 392 VAL H2 H N N 393 VAL HA H N N 394 VAL HB H N N 395 VAL HG11 H N N 396 VAL HG12 H N N 397 VAL HG13 H N N 398 VAL HG21 H N N 399 VAL HG22 H N N 400 VAL HG23 H N N 401 VAL HXT H N N 402 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BME C1 C2 sing N N 70 BME C1 O1 sing N N 71 BME C1 H11 sing N N 72 BME C1 H12 sing N N 73 BME C2 S2 sing N N 74 BME C2 H21 sing N N 75 BME C2 H22 sing N N 76 BME O1 HO1 sing N N 77 BME S2 HS2 sing N N 78 CYS N CA sing N N 79 CYS N H sing N N 80 CYS N H2 sing N N 81 CYS CA C sing N N 82 CYS CA CB sing N N 83 CYS CA HA sing N N 84 CYS C O doub N N 85 CYS C OXT sing N N 86 CYS CB SG sing N N 87 CYS CB HB2 sing N N 88 CYS CB HB3 sing N N 89 CYS SG HG sing N N 90 CYS OXT HXT sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Australian Research Council (ARC)' Australia DP180101384 1 'National Health and Medical Research Council (NHMRC, Australia)' Australia GNT1158338 2 'Wellcome Trust' 'United Kingdom' 214344/Z/18/Z 3 'Wellcome Trust' 'United Kingdom' 108183 4 'Wellcome Trust' 'United Kingdom' 220863 5 'European Research Council (ERC)' 'European Union' 339223 6 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XFX _pdbx_initial_refinement_model.details ? # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction _pdbx_reflns_twin.type _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id 1 'H, K, L' 0.9178 pseudo-merohedral 1 1 2 '-K, -H, -L' 0.0822 pseudo-merohedral 2 2 # _atom_sites.entry_id 7QDF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010827 _atom_sites.fract_transf_matrix[1][2] 0.006251 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012502 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017409 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 CL 17 17 11.460 0.010 7.196 1.166 6.255 18.519 1.645 47.778 -9.329 I 53 53 20.147 4.347 18.995 0.381 7.514 27.766 2.273 66.878 3.796 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.065 # loop_