HEADER PEPTIDE BINDING PROTEIN 14-DEC-21 7QHZ TITLE CRYSTAL STRUCTURE OF KLK6 IN COMPLEX WITH COMPOUND DKFZ917 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KALLIKREIN-6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NEUROSIN,PROTEASE M,SP59,SERINE PROTEASE 18,SERINE PROTEASE COMPND 5 9,ZYME; COMPND 6 EC: 3.4.21.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KLK6, PRSS18, PRSS9; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: EXPI293F; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PXLG KEYWDS SERINE PROTEASES, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.K.A.JAGTAP,A.BAUMANN,J.LOHBECK,D.ISAK,A.MILLER,J.HENNIG REVDAT 2 31-JAN-24 7QHZ 1 REMARK REVDAT 1 23-NOV-22 7QHZ 0 JRNL AUTH A.BAUMANN,D.ISAK,J.LOHBECK,P.K.A.JAGTAP,J.HENNIG,A.K.MILLER JRNL TITL SCALABLE SYNTHESIS AND STRUCTURAL CHARACTERIZATION OF JRNL TITL 2 REVERSIBLE KLK6 INHIBITORS. JRNL REF RSC ADV V. 12 26989 2022 JRNL REFN ESSN 2046-2069 JRNL PMID 36320846 JRNL DOI 10.1039/D2RA04670A REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.140 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 66499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.0300 - 4.3200 0.97 2781 149 0.1630 0.1829 REMARK 3 2 4.3200 - 3.4300 0.98 2792 152 0.1414 0.1810 REMARK 3 3 3.4300 - 3.0000 0.99 2865 156 0.1566 0.1918 REMARK 3 4 3.0000 - 2.7200 0.99 2862 146 0.1629 0.2518 REMARK 3 5 2.7200 - 2.5300 0.99 2813 148 0.1646 0.1810 REMARK 3 6 2.5300 - 2.3800 0.99 2884 156 0.1674 0.2456 REMARK 3 7 2.3800 - 2.2600 1.00 2830 147 0.1686 0.2187 REMARK 3 8 2.2600 - 2.1600 0.99 2873 150 0.1551 0.1869 REMARK 3 9 2.1600 - 2.0800 0.99 2819 149 0.1782 0.1935 REMARK 3 10 2.0800 - 2.0100 1.00 2860 149 0.1772 0.2340 REMARK 3 11 2.0100 - 1.9400 1.00 2865 152 0.1832 0.2157 REMARK 3 12 1.9400 - 1.8900 1.00 2872 147 0.1834 0.2338 REMARK 3 13 1.8900 - 1.8400 1.00 2834 152 0.2019 0.2439 REMARK 3 14 1.8400 - 1.7900 1.00 2868 156 0.2256 0.2374 REMARK 3 15 1.7900 - 1.7500 0.99 2824 146 0.2451 0.2779 REMARK 3 16 1.7500 - 1.7200 0.98 2770 150 0.2534 0.2858 REMARK 3 17 1.7200 - 1.6800 0.91 2660 137 0.2643 0.2936 REMARK 3 18 1.6800 - 1.6500 0.88 2484 129 0.2722 0.2925 REMARK 3 19 1.6500 - 1.6200 0.82 2429 127 0.2753 0.2694 REMARK 3 20 1.6200 - 1.5900 0.81 2276 121 0.2855 0.2866 REMARK 3 21 1.5900 - 1.5700 0.76 2164 124 0.2939 0.3163 REMARK 3 22 1.5700 - 1.5400 0.74 2137 112 0.2986 0.3329 REMARK 3 23 1.5400 - 1.5200 0.70 2010 110 0.3075 0.3836 REMARK 3 24 1.5200 - 1.5000 0.55 1577 85 0.3306 0.3325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7867 0.6861 -5.0210 REMARK 3 T TENSOR REMARK 3 T11: 0.1127 T22: 0.1250 REMARK 3 T33: 0.1282 T12: 0.0100 REMARK 3 T13: 0.0152 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.1867 L22: 2.4226 REMARK 3 L33: 1.3479 L12: 0.6183 REMARK 3 L13: -0.4064 L23: -0.5210 REMARK 3 S TENSOR REMARK 3 S11: 0.0570 S12: 0.0176 S13: -0.0064 REMARK 3 S21: 0.1071 S22: 0.0109 S23: 0.0886 REMARK 3 S31: -0.1037 S32: -0.0988 S33: -0.0584 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0374 5.6013 -14.0567 REMARK 3 T TENSOR REMARK 3 T11: 0.1210 T22: 0.0954 REMARK 3 T33: 0.1240 T12: 0.0126 REMARK 3 T13: 0.0144 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 3.4113 L22: 2.8672 REMARK 3 L33: 2.5744 L12: 1.5864 REMARK 3 L13: -0.2168 L23: -0.0978 REMARK 3 S TENSOR REMARK 3 S11: 0.0681 S12: 0.0176 S13: 0.1993 REMARK 3 S21: -0.0001 S22: -0.0453 S23: 0.0764 REMARK 3 S31: -0.1076 S32: -0.0462 S33: -0.0154 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6605 4.4226 -16.6973 REMARK 3 T TENSOR REMARK 3 T11: 0.1422 T22: 0.1173 REMARK 3 T33: 0.1331 T12: 0.0067 REMARK 3 T13: -0.0035 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.7263 L22: 1.1149 REMARK 3 L33: 1.2847 L12: 0.0601 REMARK 3 L13: -0.3290 L23: 0.3817 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: 0.0356 S13: 0.0701 REMARK 3 S21: -0.0531 S22: -0.0109 S23: 0.0564 REMARK 3 S31: -0.1255 S32: -0.0461 S33: -0.0013 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9531 9.8562 -9.2933 REMARK 3 T TENSOR REMARK 3 T11: 0.1625 T22: 0.1119 REMARK 3 T33: 0.1861 T12: -0.0163 REMARK 3 T13: -0.0029 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.3051 L22: 1.9027 REMARK 3 L33: 3.7915 L12: 0.0034 REMARK 3 L13: 0.1185 L23: 0.3720 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: -0.0876 S13: 0.2008 REMARK 3 S21: 0.1038 S22: 0.0421 S23: -0.0806 REMARK 3 S31: -0.4158 S32: 0.1142 S33: 0.0081 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3258 -8.0008 -5.6590 REMARK 3 T TENSOR REMARK 3 T11: 0.0853 T22: 0.0677 REMARK 3 T33: 0.0902 T12: -0.0066 REMARK 3 T13: -0.0032 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 2.5021 L22: 0.5684 REMARK 3 L33: 1.7423 L12: -0.3756 REMARK 3 L13: -0.2435 L23: -0.3193 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: -0.0747 S13: 0.0175 REMARK 3 S21: -0.0106 S22: -0.0145 S23: -0.0401 REMARK 3 S31: 0.0574 S32: -0.0172 S33: 0.0012 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9334 -19.8601 -18.7215 REMARK 3 T TENSOR REMARK 3 T11: 0.2755 T22: 0.1749 REMARK 3 T33: 0.1562 T12: 0.0401 REMARK 3 T13: 0.0341 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.8834 L22: 4.9887 REMARK 3 L33: 3.3090 L12: 0.5580 REMARK 3 L13: -0.8170 L23: -2.1521 REMARK 3 S TENSOR REMARK 3 S11: -0.1807 S12: -0.2802 S13: -0.1674 REMARK 3 S21: 0.1596 S22: -0.0496 S23: -0.2309 REMARK 3 S31: 0.5455 S32: 0.4026 S33: 0.2300 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2702 -10.2746 -9.0729 REMARK 3 T TENSOR REMARK 3 T11: 0.1254 T22: 0.1421 REMARK 3 T33: 0.1305 T12: -0.0000 REMARK 3 T13: -0.0065 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.7412 L22: 0.8874 REMARK 3 L33: 1.0746 L12: 0.1260 REMARK 3 L13: -0.4099 L23: -0.4758 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: -0.0584 S13: -0.0067 REMARK 3 S21: 0.0153 S22: 0.0327 S23: 0.0085 REMARK 3 S31: 0.0956 S32: 0.0064 S33: -0.0328 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9558 -19.0513 -11.9239 REMARK 3 T TENSOR REMARK 3 T11: 0.2717 T22: 0.1577 REMARK 3 T33: 0.2154 T12: -0.0651 REMARK 3 T13: -0.0237 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 6.2887 L22: 3.1746 REMARK 3 L33: 2.8876 L12: -0.8364 REMARK 3 L13: 1.0377 L23: 0.2725 REMARK 3 S TENSOR REMARK 3 S11: -0.0457 S12: 0.0300 S13: -0.5558 REMARK 3 S21: -0.3456 S22: 0.1180 S23: 0.1996 REMARK 3 S31: 0.7039 S32: -0.3463 S33: -0.0480 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 228 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5945 -1.0967 -18.8591 REMARK 3 T TENSOR REMARK 3 T11: 0.1189 T22: 0.1578 REMARK 3 T33: 0.1543 T12: -0.0219 REMARK 3 T13: 0.0045 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 2.2288 L22: 5.0088 REMARK 3 L33: 3.0090 L12: 0.3967 REMARK 3 L13: -0.9453 L23: -1.8589 REMARK 3 S TENSOR REMARK 3 S11: 0.0976 S12: -0.0260 S13: 0.1069 REMARK 3 S21: -0.0643 S22: -0.1679 S23: -0.5088 REMARK 3 S31: -0.1216 S32: 0.3353 S33: 0.0819 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QHZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1292119597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66510 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 36.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 2.753 REMARK 200 R MERGE (I) : 0.21500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.69 REMARK 200 R MERGE FOR SHELL (I) : 0.92800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3VFE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20 M TRIMETHYLAMINE N-OXIDE, 0.1 M REMARK 280 TRIS-HCL PH8.5, 20% PEG MME 2000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.25000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.19500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.11500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.19500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.25000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.11500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 110 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 113 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 102 O HOH A 401 1.91 REMARK 500 ND1 HIS A 99 O HOH A 401 1.98 REMARK 500 O HOH A 551 O HOH A 626 2.08 REMARK 500 O HOH A 475 O HOH A 609 2.10 REMARK 500 O HOH A 591 O HOH A 674 2.12 REMARK 500 O HOH A 603 O HOH A 643 2.12 REMARK 500 O HOH A 603 O HOH A 610 2.13 REMARK 500 O HOH A 455 O HOH A 633 2.15 REMARK 500 OE2 GLU A 166 O HOH A 402 2.17 REMARK 500 NE2 GLN A 241 O HOH A 403 2.17 REMARK 500 O1 GOL A 302 O HOH A 404 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 480 O HOH A 634 3554 2.07 REMARK 500 O HOH A 546 O HOH A 620 4545 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 71 -50.15 -127.50 REMARK 500 SER A 216 -58.97 -130.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 7QHZ A 16 247 UNP Q92876 KLK6_HUMAN 22 244 SEQADV 7QHZ GLY A 74 UNP Q92876 ARG 78 ENGINEERED MUTATION SEQADV 7QHZ GLN A 76 UNP Q92876 ARG 80 ENGINEERED MUTATION SEQADV 7QHZ GLN A 132 UNP Q92876 ASN 134 ENGINEERED MUTATION SEQRES 1 A 223 LEU VAL HIS GLY GLY PRO CYS ASP LYS THR SER HIS PRO SEQRES 2 A 223 TYR GLN ALA ALA LEU TYR THR SER GLY HIS LEU LEU CYS SEQRES 3 A 223 GLY GLY VAL LEU ILE HIS PRO LEU TRP VAL LEU THR ALA SEQRES 4 A 223 ALA HIS CYS LYS LYS PRO ASN LEU GLN VAL PHE LEU GLY SEQRES 5 A 223 LYS HIS ASN LEU GLY GLN GLN GLU SER SER GLN GLU GLN SEQRES 6 A 223 SER SER VAL VAL ARG ALA VAL ILE HIS PRO ASP TYR ASP SEQRES 7 A 223 ALA ALA SER HIS ASP GLN ASP ILE MET LEU LEU ARG LEU SEQRES 8 A 223 ALA ARG PRO ALA LYS LEU SER GLU LEU ILE GLN PRO LEU SEQRES 9 A 223 PRO LEU GLU ARG ASP CYS SER ALA GLN THR THR SER CYS SEQRES 10 A 223 HIS ILE LEU GLY TRP GLY LYS THR ALA ASP GLY ASP PHE SEQRES 11 A 223 PRO ASP THR ILE GLN CYS ALA TYR ILE HIS LEU VAL SER SEQRES 12 A 223 ARG GLU GLU CYS GLU HIS ALA TYR PRO GLY GLN ILE THR SEQRES 13 A 223 GLN ASN MET LEU CYS ALA GLY ASP GLU LYS TYR GLY LYS SEQRES 14 A 223 ASP SER CYS GLN GLY ASP SER GLY GLY PRO LEU VAL CYS SEQRES 15 A 223 GLY ASP HIS LEU ARG GLY LEU VAL SER TRP GLY ASN ILE SEQRES 16 A 223 PRO CYS GLY SER LYS GLU LYS PRO GLY VAL TYR THR ASN SEQRES 17 A 223 VAL CYS ARG TYR THR ASN TRP ILE GLN LYS THR ILE GLN SEQRES 18 A 223 ALA LYS HET CI5 A 301 31 HET GOL A 302 6 HETNAM CI5 (5~{R})-3-(4-CARBAMIMIDOYLPHENYL)-~{N}-[(1~{S})-1- HETNAM 2 CI5 NAPHTHALEN-1-YLPROPYL]-2-OXIDANYLIDENE-1,3- HETNAM 3 CI5 OXAZOLIDINE-5-CARBOXAMIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CI5 C24 H24 N4 O3 FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *281(H2 O) HELIX 1 AA1 ALA A 55 LYS A 59 5 5 HELIX 2 AA2 SER A 164 TYR A 172 1 9 HELIX 3 AA3 TYR A 236 ALA A 246 1 11 SHEET 1 AA1 8 GLY A 20 PRO A 21 0 SHEET 2 AA1 8 GLN A 156 LEU A 162 -1 O CYS A 157 N GLY A 20 SHEET 3 AA1 8 MET A 180 GLY A 184 -1 O GLY A 184 N HIS A 161 SHEET 4 AA1 8 GLY A 228 ASN A 232 -1 O TYR A 230 N LEU A 181 SHEET 5 AA1 8 HIS A 210 TRP A 217 -1 N TRP A 217 O VAL A 229 SHEET 6 AA1 8 PRO A 200 CYS A 203 -1 N LEU A 201 O ARG A 212 SHEET 7 AA1 8 SER A 135 GLY A 140 -1 N HIS A 137 O VAL A 202 SHEET 8 AA1 8 GLN A 156 LEU A 162 -1 O ILE A 160 N CYS A 136 SHEET 1 AA2 7 GLN A 30 THR A 35 0 SHEET 2 AA2 7 HIS A 39 HIS A 48 -1 O LEU A 41 N LEU A 33 SHEET 3 AA2 7 TRP A 51 THR A 54 -1 O LEU A 53 N VAL A 45 SHEET 4 AA2 7 MET A 104 LEU A 108 -1 O LEU A 106 N VAL A 52 SHEET 5 AA2 7 GLU A 81 ILE A 90 -1 N VAL A 89 O LEU A 105 SHEET 6 AA2 7 GLN A 64 LEU A 67 -1 N VAL A 65 O SER A 83 SHEET 7 AA2 7 GLN A 30 THR A 35 -1 N TYR A 34 O GLN A 64 SSBOND 1 CYS A 22 CYS A 157 1555 1555 2.05 SSBOND 2 CYS A 42 CYS A 58 1555 1555 2.03 SSBOND 3 CYS A 128 CYS A 234 1555 1555 2.04 SSBOND 4 CYS A 136 CYS A 203 1555 1555 2.07 SSBOND 5 CYS A 168 CYS A 182 1555 1555 2.02 SSBOND 6 CYS A 193 CYS A 222 1555 1555 2.10 CISPEP 1 ILE A 220 PRO A 221 0 -1.27 CRYST1 44.500 48.230 108.390 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022472 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020734 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009226 0.00000