HEADER HYDROLASE 17-DEC-21 7QKB TITLE CRYSTAL STRUCTURE OF HUMAN CATHEPSIN L IN COMPLEX WITH COVALENTLY TITLE 2 BOUND GC376 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATHEPSIN L; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSL, CTSL1; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 644223 KEYWDS CATHEPSIN, CYSTEIN PROTEASE, DRUG DEVELOPMENT, DRUG TARGET, PEPTIDE- KEYWDS 2 LIKE INHIBITOR, LYSOSOME, PROTEIN DEGRADATION, SARS-COV-2, COVID-19, KEYWDS 3 SPIKE PROTEIN MATURATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.Y.A.REINKE,S.FALKE,J.LIESKE,W.EWERT,J.LOBODA,A.RAHMANI MASHHOUR, AUTHOR 2 M.HAUSER,K.KARNICAR,A.USENIK,N.LINDIC,M.LACH,H.BOEHLER,T.BECK,R.COX, AUTHOR 3 H.N.CHAPMAN,W.HINRICHS,D.TURK,S.GUENTHER,A.MEENTS REVDAT 4 23-OCT-24 7QKB 1 REMARK REVDAT 3 31-JAN-24 7QKB 1 REMARK REVDAT 2 01-NOV-23 7QKB 1 JRNL REVDAT 1 28-DEC-22 7QKB 0 JRNL AUTH P.Y.A.REINKE,E.E.DE SOUZA,S.GUNTHER,S.FALKE,J.LIESKE, JRNL AUTH 2 W.EWERT,J.LOBODA,A.HERRMANN,A.RAHMANI MASHHOUR,K.KARNICAR, JRNL AUTH 3 A.USENIK,N.LINDIC,A.SEKIRNIK,V.F.BOTOSSO,G.M.M.SANTELLI, JRNL AUTH 4 J.KAPRONEZAI,M.V.DE ARAUJO,T.T.SILVA-PEREIRA,A.F.S.FILHO, JRNL AUTH 5 M.S.TAVARES,L.FLOREZ-ALVAREZ,D.B.L.DE OLIVEIRA,E.L.DURIGON, JRNL AUTH 6 P.R.GIARETTA,M.B.HEINEMANN,M.HAUSER,B.SEYCHELL,H.BOHLER, JRNL AUTH 7 W.RUT,M.DRAG,T.BECK,R.COX,H.N.CHAPMAN,C.BETZEL,W.BREHM, JRNL AUTH 8 W.HINRICHS,G.EBERT,S.L.LATHAM,A.M.S.GUIMARAES,D.TURK, JRNL AUTH 9 C.WRENGER,A.MEENTS JRNL TITL CALPEPTIN IS A POTENT CATHEPSIN INHIBITOR AND DRUG CANDIDATE JRNL TITL 2 FOR SARS-COV-2 INFECTIONS. JRNL REF COMMUN BIOL V. 6 1058 2023 JRNL REFN ESSN 2399-3642 JRNL PMID 37853179 JRNL DOI 10.1038/S42003-023-05317-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION. REMARK 1 REF ACTA CRYSTALLOGR D BIOL V. 66 213 2010 REMARK 1 REF 2 CRYSTALLOGR REMARK 1 REFN ESSN 1399-0047 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18-3855_9999 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 67386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2500 - 4.3300 0.93 4786 148 0.1506 0.1827 REMARK 3 2 4.3300 - 3.4400 0.94 4835 155 0.1438 0.1583 REMARK 3 3 3.4400 - 3.0000 0.96 4965 147 0.1723 0.2207 REMARK 3 4 3.0000 - 2.7300 0.96 4934 150 0.1866 0.2319 REMARK 3 5 2.7300 - 2.5300 0.86 4465 123 0.1875 0.2651 REMARK 3 6 2.5300 - 2.3800 0.91 4669 151 0.1819 0.1989 REMARK 3 7 2.3800 - 2.2600 0.92 4730 138 0.1831 0.2331 REMARK 3 8 2.2600 - 2.1700 0.93 4805 147 0.1866 0.2300 REMARK 3 9 2.1700 - 2.0800 0.93 4799 135 0.1928 0.2279 REMARK 3 10 2.0800 - 2.0100 0.93 4830 149 0.2013 0.2287 REMARK 3 11 2.0100 - 1.9500 0.94 4814 152 0.2181 0.2430 REMARK 3 12 1.9500 - 1.8900 0.91 4671 135 0.2542 0.3162 REMARK 3 13 1.8900 - 1.8400 0.82 4212 142 0.2772 0.3262 REMARK 3 14 1.8400 - 1.8000 0.75 3891 108 0.3125 0.3862 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.216 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.649 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7169 REMARK 3 ANGLE : 0.652 9651 REMARK 3 CHIRALITY : 0.049 943 REMARK 3 PLANARITY : 0.004 1308 REMARK 3 DIHEDRAL : 20.387 2685 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 25 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1541 -8.9649 -5.5021 REMARK 3 T TENSOR REMARK 3 T11: 0.4922 T22: 0.4699 REMARK 3 T33: 0.3634 T12: -0.0069 REMARK 3 T13: 0.0831 T23: -0.1406 REMARK 3 L TENSOR REMARK 3 L11: 8.1884 L22: 2.7022 REMARK 3 L33: 2.2571 L12: 0.6375 REMARK 3 L13: 2.4145 L23: -0.0193 REMARK 3 S TENSOR REMARK 3 S11: -0.2972 S12: -0.1447 S13: 0.4964 REMARK 3 S21: -0.0401 S22: 0.1213 S23: -0.0562 REMARK 3 S31: -0.0974 S32: 0.0600 S33: 0.2085 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4474 -16.3579 -12.0571 REMARK 3 T TENSOR REMARK 3 T11: 0.4334 T22: 0.4775 REMARK 3 T33: 0.4242 T12: -0.0465 REMARK 3 T13: 0.0545 T23: -0.1116 REMARK 3 L TENSOR REMARK 3 L11: 4.7004 L22: 7.7162 REMARK 3 L33: 7.6446 L12: 5.8204 REMARK 3 L13: -5.3962 L23: -5.7488 REMARK 3 S TENSOR REMARK 3 S11: -0.1301 S12: -0.1484 S13: -0.1304 REMARK 3 S21: -0.0536 S22: 0.0783 S23: -0.2508 REMARK 3 S31: 0.2863 S32: 0.5073 S33: 0.0891 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7379 -21.9526 -15.6966 REMARK 3 T TENSOR REMARK 3 T11: 0.4338 T22: 0.3750 REMARK 3 T33: 0.3736 T12: -0.0500 REMARK 3 T13: 0.0550 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 3.5889 L22: 4.1246 REMARK 3 L33: 5.3870 L12: 1.3858 REMARK 3 L13: 0.8956 L23: 0.2887 REMARK 3 S TENSOR REMARK 3 S11: 0.0705 S12: -0.0532 S13: 0.0146 REMARK 3 S21: -0.1817 S22: 0.0435 S23: 0.1536 REMARK 3 S31: 0.0771 S32: -0.3529 S33: -0.0974 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2630 -21.2721 -3.9808 REMARK 3 T TENSOR REMARK 3 T11: 0.4017 T22: 0.4570 REMARK 3 T33: 0.5489 T12: 0.0317 REMARK 3 T13: 0.0915 T23: -0.0827 REMARK 3 L TENSOR REMARK 3 L11: 1.1499 L22: 3.0009 REMARK 3 L33: 9.9227 L12: 0.0313 REMARK 3 L13: 2.9585 L23: -0.0515 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: 0.1728 S13: -0.3534 REMARK 3 S21: 0.1843 S22: 0.2991 S23: -0.3021 REMARK 3 S31: 0.3370 S32: 0.2422 S33: -0.4521 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3528 -11.8028 5.7873 REMARK 3 T TENSOR REMARK 3 T11: 0.3737 T22: 0.4087 REMARK 3 T33: 0.3611 T12: -0.0233 REMARK 3 T13: 0.0178 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.5214 L22: 1.7956 REMARK 3 L33: 3.6413 L12: 0.5576 REMARK 3 L13: 0.3312 L23: 1.3617 REMARK 3 S TENSOR REMARK 3 S11: 0.0109 S12: -0.2273 S13: -0.1669 REMARK 3 S21: 0.2326 S22: 0.0454 S23: -0.0936 REMARK 3 S31: 0.1690 S32: -0.1511 S33: -0.0580 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.7274 5.6720 17.7221 REMARK 3 T TENSOR REMARK 3 T11: 0.2529 T22: 0.3328 REMARK 3 T33: 0.2943 T12: 0.0000 REMARK 3 T13: -0.0008 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 6.0708 L22: 8.1382 REMARK 3 L33: 6.5150 L12: 0.3056 REMARK 3 L13: -0.2219 L23: -0.7522 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: 0.0067 S13: 0.2791 REMARK 3 S21: 0.1822 S22: -0.1084 S23: -0.0520 REMARK 3 S31: -0.2294 S32: 0.1947 S33: 0.0259 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.2189 -1.3431 24.9812 REMARK 3 T TENSOR REMARK 3 T11: 0.4142 T22: 0.3737 REMARK 3 T33: 0.3609 T12: 0.0643 REMARK 3 T13: -0.0325 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 3.0452 L22: 7.5512 REMARK 3 L33: 1.4395 L12: 2.8424 REMARK 3 L13: -0.0006 L23: 1.7351 REMARK 3 S TENSOR REMARK 3 S11: -0.0209 S12: -0.2553 S13: -0.1192 REMARK 3 S21: 0.5957 S22: 0.1338 S23: -0.1664 REMARK 3 S31: 0.0247 S32: 0.0162 S33: -0.1009 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7911 -9.2702 20.8975 REMARK 3 T TENSOR REMARK 3 T11: 0.3331 T22: 0.3255 REMARK 3 T33: 0.3810 T12: 0.0336 REMARK 3 T13: -0.0145 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 5.8077 L22: 4.9837 REMARK 3 L33: 9.7964 L12: 4.3335 REMARK 3 L13: -1.8203 L23: -1.6558 REMARK 3 S TENSOR REMARK 3 S11: -0.0702 S12: 0.4898 S13: -0.3912 REMARK 3 S21: -0.3299 S22: 0.2766 S23: -0.0303 REMARK 3 S31: 0.4297 S32: -0.3830 S33: -0.2072 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.9891 -9.2324 31.8008 REMARK 3 T TENSOR REMARK 3 T11: 0.4854 T22: 0.3568 REMARK 3 T33: 0.4721 T12: 0.0805 REMARK 3 T13: -0.0731 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 2.7421 L22: 2.9502 REMARK 3 L33: 7.4548 L12: -0.5692 REMARK 3 L13: -4.1849 L23: 0.4036 REMARK 3 S TENSOR REMARK 3 S11: 0.0148 S12: -0.4082 S13: -0.5118 REMARK 3 S21: 0.2638 S22: -0.1172 S23: -0.1498 REMARK 3 S31: 0.3668 S32: 0.6672 S33: 0.2109 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0878 5.5854 14.6782 REMARK 3 T TENSOR REMARK 3 T11: 0.3267 T22: 0.4027 REMARK 3 T33: 0.4404 T12: 0.0454 REMARK 3 T13: 0.0165 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.1528 L22: 3.2048 REMARK 3 L33: 5.1628 L12: -0.6392 REMARK 3 L13: 0.6424 L23: -2.1557 REMARK 3 S TENSOR REMARK 3 S11: -0.0718 S12: 0.2225 S13: 0.0574 REMARK 3 S21: -0.0464 S22: 0.1379 S23: -0.0135 REMARK 3 S31: -0.1289 S32: -0.2480 S33: -0.1224 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.4078 2.9377 4.4861 REMARK 3 T TENSOR REMARK 3 T11: 0.3174 T22: 0.4760 REMARK 3 T33: 0.3300 T12: -0.0046 REMARK 3 T13: 0.0077 T23: -0.0438 REMARK 3 L TENSOR REMARK 3 L11: 5.8303 L22: 5.5874 REMARK 3 L33: 5.7160 L12: -1.2710 REMARK 3 L13: -2.1868 L23: 0.9388 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: 0.9524 S13: 0.0091 REMARK 3 S21: -0.6201 S22: 0.0049 S23: -0.1316 REMARK 3 S31: 0.0012 S32: 0.0491 S33: -0.0549 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.5094 0.1551 12.6725 REMARK 3 T TENSOR REMARK 3 T11: 0.4093 T22: 0.4930 REMARK 3 T33: 0.4763 T12: -0.0081 REMARK 3 T13: 0.0354 T23: -0.0584 REMARK 3 L TENSOR REMARK 3 L11: 9.4055 L22: 3.5714 REMARK 3 L33: 2.1721 L12: 5.6223 REMARK 3 L13: -1.8116 L23: -0.7375 REMARK 3 S TENSOR REMARK 3 S11: -0.1392 S12: 0.7644 S13: -0.0926 REMARK 3 S21: 0.1717 S22: 0.2535 S23: -0.4901 REMARK 3 S31: -0.5535 S32: 0.5688 S33: -0.2924 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 198 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.6874 6.3994 2.3140 REMARK 3 T TENSOR REMARK 3 T11: 0.5141 T22: 0.5539 REMARK 3 T33: 0.4442 T12: 0.0441 REMARK 3 T13: 0.1585 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 8.0450 L22: 3.4363 REMARK 3 L33: 8.6152 L12: -0.5790 REMARK 3 L13: 8.3846 L23: -0.6439 REMARK 3 S TENSOR REMARK 3 S11: -0.2095 S12: 0.8157 S13: 0.0913 REMARK 3 S21: -0.2010 S22: 0.0803 S23: -0.1018 REMARK 3 S31: -0.4378 S32: 0.5657 S33: 0.1292 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 208 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.9591 2.1647 11.3147 REMARK 3 T TENSOR REMARK 3 T11: 0.3836 T22: 0.4105 REMARK 3 T33: 0.4391 T12: 0.0106 REMARK 3 T13: -0.0102 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 6.6570 L22: 2.2556 REMARK 3 L33: 3.6036 L12: -1.3540 REMARK 3 L13: -4.6354 L23: 0.5741 REMARK 3 S TENSOR REMARK 3 S11: -0.3324 S12: 0.1261 S13: -0.2738 REMARK 3 S21: 0.1514 S22: -0.0780 S23: 0.1178 REMARK 3 S31: 0.1541 S32: 0.0168 S33: 0.3746 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0022 5.1665 -12.2274 REMARK 3 T TENSOR REMARK 3 T11: 0.5231 T22: 0.4860 REMARK 3 T33: 0.2958 T12: -0.1486 REMARK 3 T13: 0.0895 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 6.1461 L22: 7.9190 REMARK 3 L33: 7.5324 L12: 2.4932 REMARK 3 L13: 2.0877 L23: 2.4636 REMARK 3 S TENSOR REMARK 3 S11: -0.1654 S12: 0.4767 S13: -0.1809 REMARK 3 S21: -0.5007 S22: 0.2133 S23: 0.1501 REMARK 3 S31: 0.4223 S32: -0.6941 S33: -0.0561 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7328 8.8233 -18.2421 REMARK 3 T TENSOR REMARK 3 T11: 0.5434 T22: 0.4261 REMARK 3 T33: 0.3419 T12: -0.0822 REMARK 3 T13: 0.0544 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 4.3642 L22: 7.9749 REMARK 3 L33: 9.9170 L12: 1.1699 REMARK 3 L13: 1.1370 L23: 7.8313 REMARK 3 S TENSOR REMARK 3 S11: -0.1081 S12: 0.3956 S13: -0.2869 REMARK 3 S21: -0.4775 S22: 0.0750 S23: -0.0804 REMARK 3 S31: 0.3448 S32: -0.4077 S33: 0.0028 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 43 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8912 14.6368 -14.2059 REMARK 3 T TENSOR REMARK 3 T11: 0.4175 T22: 0.3817 REMARK 3 T33: 0.3215 T12: -0.0375 REMARK 3 T13: 0.0284 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 6.0607 L22: 6.2193 REMARK 3 L33: 4.4586 L12: 0.1631 REMARK 3 L13: -0.1546 L23: -0.0858 REMARK 3 S TENSOR REMARK 3 S11: -0.1356 S12: 0.0060 S13: -0.2030 REMARK 3 S21: -0.0311 S22: 0.0733 S23: -0.3264 REMARK 3 S31: 0.1356 S32: 0.2711 S33: 0.0582 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9823 14.3281 -23.4671 REMARK 3 T TENSOR REMARK 3 T11: 0.7035 T22: 0.6762 REMARK 3 T33: 0.3357 T12: -0.0922 REMARK 3 T13: -0.0573 T23: 0.0726 REMARK 3 L TENSOR REMARK 3 L11: 7.9431 L22: 2.6220 REMARK 3 L33: 4.3070 L12: 0.7356 REMARK 3 L13: -1.8712 L23: -0.4698 REMARK 3 S TENSOR REMARK 3 S11: -0.5054 S12: 0.8888 S13: 0.5832 REMARK 3 S21: -0.4037 S22: 0.5460 S23: 0.2655 REMARK 3 S31: 0.0894 S32: -0.8371 S33: -0.0504 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 129 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6671 12.7711 -6.5746 REMARK 3 T TENSOR REMARK 3 T11: 0.4111 T22: 0.6024 REMARK 3 T33: 0.4099 T12: -0.0089 REMARK 3 T13: 0.0423 T23: 0.0678 REMARK 3 L TENSOR REMARK 3 L11: 4.1950 L22: 3.4968 REMARK 3 L33: 6.3341 L12: 0.9674 REMARK 3 L13: -0.1692 L23: 0.0496 REMARK 3 S TENSOR REMARK 3 S11: -0.1132 S12: 0.3230 S13: 0.2567 REMARK 3 S21: 0.0352 S22: 0.2169 S23: 0.5115 REMARK 3 S31: -0.0877 S32: -1.1475 S33: -0.0768 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 198 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5332 15.5003 -14.4081 REMARK 3 T TENSOR REMARK 3 T11: 0.5027 T22: 0.8856 REMARK 3 T33: 0.4364 T12: -0.0291 REMARK 3 T13: -0.0530 T23: 0.1180 REMARK 3 L TENSOR REMARK 3 L11: 4.6391 L22: 4.2011 REMARK 3 L33: 6.1514 L12: 0.5196 REMARK 3 L13: -3.1208 L23: -1.6177 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 1.0346 S13: 0.5355 REMARK 3 S21: -0.0677 S22: 0.2856 S23: 0.4829 REMARK 3 S31: -0.1746 S32: -1.8275 S33: -0.2656 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1765 11.9603 24.2107 REMARK 3 T TENSOR REMARK 3 T11: 0.4232 T22: 0.3975 REMARK 3 T33: 0.3657 T12: 0.0389 REMARK 3 T13: 0.0599 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 3.0595 L22: 6.8892 REMARK 3 L33: 3.6152 L12: -1.2227 REMARK 3 L13: 2.1997 L23: -3.6760 REMARK 3 S TENSOR REMARK 3 S11: 0.1987 S12: -0.1545 S13: -0.0674 REMARK 3 S21: -0.0341 S22: 0.0734 S23: 0.6854 REMARK 3 S31: 0.1711 S32: -0.1980 S33: -0.3136 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 25 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7605 26.1847 27.9944 REMARK 3 T TENSOR REMARK 3 T11: 0.4139 T22: 0.3695 REMARK 3 T33: 0.4415 T12: 0.0685 REMARK 3 T13: 0.0157 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 2.6553 L22: 6.0872 REMARK 3 L33: 3.1525 L12: 2.0740 REMARK 3 L13: -0.1881 L23: -1.1924 REMARK 3 S TENSOR REMARK 3 S11: -0.0177 S12: -0.0591 S13: 0.2417 REMARK 3 S21: 0.2837 S22: -0.0161 S23: 0.0835 REMARK 3 S31: -0.2373 S32: -0.1339 S33: 0.0242 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8206 32.4659 22.9304 REMARK 3 T TENSOR REMARK 3 T11: 0.4440 T22: 0.3650 REMARK 3 T33: 0.5923 T12: 0.0267 REMARK 3 T13: -0.0257 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 5.2667 L22: 8.8812 REMARK 3 L33: 6.5355 L12: -2.9477 REMARK 3 L13: -3.1985 L23: 4.4357 REMARK 3 S TENSOR REMARK 3 S11: 0.3307 S12: 0.3546 S13: 0.5980 REMARK 3 S21: -0.1907 S22: -0.2636 S23: 0.4740 REMARK 3 S31: -0.6315 S32: -0.5278 S33: -0.1014 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1177 16.2625 35.3934 REMARK 3 T TENSOR REMARK 3 T11: 0.5493 T22: 0.4557 REMARK 3 T33: 0.3542 T12: -0.0078 REMARK 3 T13: 0.0289 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 6.8323 L22: 2.7068 REMARK 3 L33: 1.7840 L12: -1.0164 REMARK 3 L13: 1.5449 L23: 0.1307 REMARK 3 S TENSOR REMARK 3 S11: -0.1180 S12: -0.2523 S13: 0.3086 REMARK 3 S21: 0.4972 S22: 0.1078 S23: -0.3511 REMARK 3 S31: -0.0559 S32: 0.0178 S33: 0.0188 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 129 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2153 9.2280 21.0676 REMARK 3 T TENSOR REMARK 3 T11: 0.3818 T22: 0.3375 REMARK 3 T33: 0.3401 T12: 0.0178 REMARK 3 T13: 0.0222 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.3604 L22: 2.6014 REMARK 3 L33: 2.0685 L12: -0.6275 REMARK 3 L13: -0.1121 L23: -0.2597 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.1225 S13: 0.0435 REMARK 3 S21: 0.0503 S22: -0.0748 S23: -0.1613 REMARK 3 S31: 0.1079 S32: 0.1770 S33: 0.0486 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292119766. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67386 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 44.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.13460 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.95180 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3OF9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MATURE CATHEPSIN L AT A CONCENTRATION REMARK 280 OF 7 MG/ML WAS EQUILIBRATED AGAINST 27% W/V PEG 8000, 1 MM TCEP REMARK 280 AND 0.1 M SODIUM ACETATE AT PH 4.0. CRYSTALS, WHICH GREW AT 293 REMARK 280 K TO FINAL SIZE AFTER APPROXIMATELY 3 DAYS, WERE TRANSFERRED TO REMARK 280 A COMPOUND SOAKING SOLUTION CONTAINING 22% W/V PEG 8000, 1 MM REMARK 280 TCEP AND 0.1 M SODIUM ACETATE AT PH 4.0 AS WELL AS 5% V/V DMSO REMARK 280 AND 10% V/V PEG 400., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 THR B 175 REMARK 465 GLU B 176 REMARK 465 SER B 177 REMARK 465 ASP B 178 REMARK 465 ALA C 1 REMARK 465 THR C 175 REMARK 465 GLU C 176 REMARK 465 SER C 177 REMARK 465 ASP C 178 REMARK 465 ALA D 1 REMARK 465 PRO D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 21 44.08 -97.12 REMARK 500 ASN B 180 73.65 48.60 REMARK 500 ALA B 214 58.13 -154.36 REMARK 500 GLN C 21 46.70 -95.49 REMARK 500 LYS C 147 -37.88 -133.92 REMARK 500 ALA C 214 60.57 -151.94 REMARK 500 GLN D 21 56.14 -93.56 REMARK 500 ASP D 160 77.75 -112.74 REMARK 500 SER D 174 -165.73 66.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 137 OD1 REMARK 620 2 ASP B 137 OD2 49.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 137 OD1 REMARK 620 2 ASP C 137 OD2 50.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 153 OE1 REMARK 620 2 ASP D 155 OD1 98.0 REMARK 620 3 ASP D 155 OD2 138.6 51.7 REMARK 620 4 HOH D 477 O 104.2 133.8 86.5 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7QKA RELATED DB: PDB DBREF 7QKB A 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7QKB B 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7QKB C 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7QKB D 1 220 UNP P07711 CATL1_HUMAN 114 333 SEQADV 7QKB ALA A 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7QKB ALA B 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7QKB ALA C 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7QKB ALA D 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQRES 1 A 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 A 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 A 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 A 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 A 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 A 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 A 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 A 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 A 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 A 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 A 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 A 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 A 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 A 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 A 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 A 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 A 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 B 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 B 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 B 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 B 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 B 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 B 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 B 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 B 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 B 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 B 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 B 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 B 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 B 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 B 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 B 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 B 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 B 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 C 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 C 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 C 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 C 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 C 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 C 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 C 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 C 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 C 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 C 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 C 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 C 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 C 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 C 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 C 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 C 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 C 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 D 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 D 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 D 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 D 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 D 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 D 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 D 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 D 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 D 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 D 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 D 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 D 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 D 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 D 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 D 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 D 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 D 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL HET PEG A 401 17 HET NA A 402 1 HET PGE A 403 24 HET CL A 404 1 HET PEG A 405 17 HET UED A 406 59 HET PEG B 301 17 HET PEG B 302 17 HET PEG B 303 17 HET NA B 304 1 HET PGE B 305 24 HET UED B 306 59 HET PEG C 301 17 HET PEG C 302 17 HET NA C 303 1 HET PG4 C 304 31 HET UED C 305 59 HET NA D 301 1 HET P6G D 302 45 HET UED D 303 59 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NA SODIUM ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM CL CHLORIDE ION HETNAM UED N~2~-[(BENZYLOXY)CARBONYL]-N-{(2S)-1-HYDROXY-3-[(3S)-2- HETNAM 2 UED OXOPYRROLIDIN-3-YL]PROPAN-2-YL}-L-LEUCINAMIDE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM P6G HEXAETHYLENE GLYCOL HETSYN UED GC373 BOUND FORM, GC376 BOUND FORM HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 5 PEG 7(C4 H10 O3) FORMUL 6 NA 4(NA 1+) FORMUL 7 PGE 2(C6 H14 O4) FORMUL 8 CL CL 1- FORMUL 10 UED 4(C21 H31 N3 O5) FORMUL 20 PG4 C8 H18 O5 FORMUL 23 P6G C12 H26 O7 FORMUL 25 HOH *272(H2 O) HELIX 1 AA1 ARG A 8 GLY A 11 5 4 HELIX 2 AA2 SER A 24 GLY A 43 1 20 HELIX 3 AA3 SER A 49 SER A 57 1 9 HELIX 4 AA4 GLY A 58 GLY A 61 5 4 HELIX 5 AA5 GLU A 63 GLY A 67 5 5 HELIX 6 AA6 LEU A 69 GLY A 81 1 13 HELIX 7 AA7 ASN A 101 LYS A 103 5 3 HELIX 8 AA8 GLN A 118 VAL A 129 1 12 HELIX 9 AA9 HIS A 140 PHE A 145 1 6 HELIX 10 AB1 ASN A 207 ILE A 211 5 5 HELIX 11 AB2 ARG B 8 GLY B 11 5 4 HELIX 12 AB3 SER B 24 GLY B 43 1 20 HELIX 13 AB4 SER B 49 SER B 57 1 9 HELIX 14 AB5 GLY B 58 GLY B 61 5 4 HELIX 15 AB6 GLU B 63 GLY B 67 5 5 HELIX 16 AB7 LEU B 69 GLY B 81 1 13 HELIX 17 AB8 ASN B 101 LYS B 103 5 3 HELIX 18 AB9 GLN B 118 VAL B 129 1 12 HELIX 19 AC1 HIS B 140 PHE B 145 1 6 HELIX 20 AC2 ASN B 207 ILE B 211 5 5 HELIX 21 AC3 ARG C 8 GLY C 11 5 4 HELIX 22 AC4 SER C 24 GLY C 43 1 20 HELIX 23 AC5 SER C 49 SER C 57 1 9 HELIX 24 AC6 GLY C 58 GLY C 61 5 4 HELIX 25 AC7 GLU C 63 GLY C 67 5 5 HELIX 26 AC8 LEU C 69 GLY C 81 1 13 HELIX 27 AC9 ASN C 101 LYS C 103 5 3 HELIX 28 AD1 GLN C 118 VAL C 129 1 12 HELIX 29 AD2 HIS C 140 PHE C 145 1 6 HELIX 30 AD3 ASN C 207 ILE C 211 5 5 HELIX 31 AD4 ARG D 8 GLY D 11 5 4 HELIX 32 AD5 SER D 24 GLY D 43 1 20 HELIX 33 AD6 SER D 49 SER D 57 1 9 HELIX 34 AD7 GLY D 58 GLY D 61 5 4 HELIX 35 AD8 GLU D 63 GLY D 67 5 5 HELIX 36 AD9 LEU D 69 GLY D 81 1 13 HELIX 37 AE1 ASN D 101 LYS D 103 5 3 HELIX 38 AE2 GLN D 118 VAL D 129 1 12 HELIX 39 AE3 HIS D 140 PHE D 145 1 6 HELIX 40 AE4 THR D 175 ASN D 179 5 5 HELIX 41 AE5 ASN D 207 ILE D 211 5 5 SHEET 1 AA1 3 VAL A 5 ASP A 6 0 SHEET 2 AA1 3 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA1 3 ILE A 132 ILE A 136 -1 N VAL A 134 O VAL A 165 SHEET 1 AA2 5 VAL A 5 ASP A 6 0 SHEET 2 AA2 5 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA2 5 LYS A 181 LYS A 186 -1 O LYS A 186 N LEU A 166 SHEET 4 AA2 5 TYR A 198 ALA A 202 -1 O MET A 201 N TRP A 183 SHEET 5 AA2 5 ILE A 150 TYR A 151 1 N TYR A 151 O LYS A 200 SHEET 1 AA3 2 LEU A 83 ASP A 84 0 SHEET 2 AA3 2 SER A 105 ALA A 107 -1 O VAL A 106 N LEU A 83 SHEET 1 AA4 2 PHE A 112 ASP A 114 0 SHEET 2 AA4 2 SER A 216 PRO A 218 -1 O TYR A 217 N VAL A 113 SHEET 1 AA5 3 VAL B 5 ASP B 6 0 SHEET 2 AA5 3 HIS B 163 PHE B 172 -1 O TYR B 170 N VAL B 5 SHEET 3 AA5 3 ILE B 132 ILE B 136 -1 N ILE B 132 O VAL B 167 SHEET 1 AA6 5 VAL B 5 ASP B 6 0 SHEET 2 AA6 5 HIS B 163 PHE B 172 -1 O TYR B 170 N VAL B 5 SHEET 3 AA6 5 LYS B 181 LYS B 186 -1 O LYS B 186 N LEU B 166 SHEET 4 AA6 5 TYR B 198 LYS B 203 -1 O MET B 201 N TRP B 183 SHEET 5 AA6 5 ILE B 150 TYR B 151 1 N TYR B 151 O LYS B 200 SHEET 1 AA7 2 LEU B 83 ASP B 84 0 SHEET 2 AA7 2 SER B 105 ALA B 107 -1 O VAL B 106 N LEU B 83 SHEET 1 AA8 2 PHE B 112 ASP B 114 0 SHEET 2 AA8 2 SER B 216 PRO B 218 -1 O TYR B 217 N VAL B 113 SHEET 1 AA9 3 VAL C 5 ASP C 6 0 SHEET 2 AA9 3 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AA9 3 ILE C 132 ILE C 136 -1 N ILE C 132 O VAL C 167 SHEET 1 AB1 5 VAL C 5 ASP C 6 0 SHEET 2 AB1 5 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AB1 5 TYR C 182 LYS C 186 -1 O LYS C 186 N LEU C 166 SHEET 4 AB1 5 TYR C 198 ALA C 202 -1 O MET C 201 N TRP C 183 SHEET 5 AB1 5 ILE C 150 TYR C 151 1 N TYR C 151 O LYS C 200 SHEET 1 AB2 2 LEU C 83 ASP C 84 0 SHEET 2 AB2 2 SER C 105 ALA C 107 -1 O VAL C 106 N LEU C 83 SHEET 1 AB3 2 PHE C 112 ASP C 114 0 SHEET 2 AB3 2 SER C 216 PRO C 218 -1 O TYR C 217 N VAL C 113 SHEET 1 AB4 3 VAL D 5 ASP D 6 0 SHEET 2 AB4 3 HIS D 163 GLU D 173 -1 O TYR D 170 N VAL D 5 SHEET 3 AB4 3 ILE D 132 ILE D 136 -1 N ILE D 136 O HIS D 163 SHEET 1 AB5 5 VAL D 5 ASP D 6 0 SHEET 2 AB5 5 HIS D 163 GLU D 173 -1 O TYR D 170 N VAL D 5 SHEET 3 AB5 5 ASN D 180 LYS D 186 -1 O LYS D 186 N LEU D 166 SHEET 4 AB5 5 TYR D 198 ALA D 202 -1 O MET D 201 N TRP D 183 SHEET 5 AB5 5 ILE D 150 TYR D 151 1 N TYR D 151 O LYS D 200 SHEET 1 AB6 2 LEU D 83 ASP D 84 0 SHEET 2 AB6 2 SER D 105 ALA D 107 -1 O VAL D 106 N LEU D 83 SHEET 1 AB7 2 PHE D 112 ASP D 114 0 SHEET 2 AB7 2 SER D 216 PRO D 218 -1 O TYR D 217 N VAL D 113 SSBOND 1 CYS A 22 CYS A 65 1555 1555 1.86 SSBOND 2 CYS A 56 CYS A 98 1555 1555 2.04 SSBOND 3 CYS A 156 CYS A 209 1555 1555 2.10 SSBOND 4 CYS B 22 CYS B 65 1555 1555 2.07 SSBOND 5 CYS B 56 CYS B 98 1555 1555 2.03 SSBOND 6 CYS B 156 CYS B 209 1555 1555 2.11 SSBOND 7 CYS C 22 CYS C 65 1555 1555 2.12 SSBOND 8 CYS C 56 CYS C 98 1555 1555 2.04 SSBOND 9 CYS C 156 CYS C 209 1555 1555 2.04 SSBOND 10 CYS D 22 CYS D 65 1555 1555 2.05 SSBOND 11 CYS D 56 CYS D 98 1555 1555 2.10 SSBOND 12 CYS D 156 CYS D 209 1555 1555 2.04 LINK SG CYS A 25 C21 UED A 406 1555 1555 1.79 LINK SG CYS B 25 C21 UED B 306 1555 1555 1.77 LINK SG CYS C 25 C21 UED C 305 1555 1555 1.77 LINK SG CYS D 25 C21 UED D 303 1555 1555 1.77 LINK OD2 ASP A 137 NA NA A 402 1555 1555 2.27 LINK OD1 ASP B 137 NA NA B 304 1555 1555 2.82 LINK OD2 ASP B 137 NA NA B 304 1555 1555 2.26 LINK OD1 ASP C 137 NA NA C 303 1555 1555 2.79 LINK OD2 ASP C 137 NA NA C 303 1555 1555 2.19 LINK OE1 GLU D 153 NA NA D 301 1555 1555 2.08 LINK OD1 ASP D 155 NA NA D 301 1555 1555 2.05 LINK OD2 ASP D 155 NA NA D 301 1555 1555 2.77 LINK NA NA D 301 O HOH D 477 1555 1555 2.20 CRYST1 57.290 62.450 67.820 105.31 93.52 115.93 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017455 0.008487 0.004042 0.00000 SCALE2 0.000000 0.017805 0.006098 0.00000 SCALE3 0.000000 0.000000 0.015615 0.00000