HEADER BLOOD CLOTTING 28-DEC-21 7QOT TITLE FACTOR XI AND PLASMA KALLIKREIN APPLE DOMAIN STRUCTURES REVEALS TITLE 2 DIFFERENT KININOGEN BOUND COMPLEXES COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAGULATION FACTOR XIA HEAVY CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: KININOGEN-1 LIGHT CHAIN; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: F11; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: KNG1, BDK, KNG; SOURCE 13 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7227 KEYWDS PLASMA KALLIKREIN (PK), HIGH MOLECULAR WEIGHT KININOGEN (HK), FACTOR KEYWDS 2 XII (FXII), FACTOR XI (FXI), FACTOR IX (FIX), BRADYKININ (BK), BLOOD KEYWDS 3 CLOTTING EXPDTA X-RAY DIFFRACTION AUTHOR C.LI,B.AWITAL,S.WONG,I.DREVENY,J.MEIJERS,J.EMSLEY REVDAT 2 31-JAN-24 7QOT 1 REMARK REVDAT 1 18-JAN-23 7QOT 0 JRNL AUTH C.LI,K.M.VOOS,M.PATHAK,G.HALL,K.R.MCCRAE,I.DREVENY,R.LI, JRNL AUTH 2 J.EMSLEY JRNL TITL PLASMA KALLIKREIN STRUCTURE REVEALS APPLE DOMAIN DISC JRNL TITL 2 ROTATED CONFORMATION COMPARED TO FACTOR XI. JRNL REF J THROMB HAEMOST V. 17 759 2019 JRNL REFN ESSN 1538-7836 JRNL PMID 30801944 JRNL DOI 10.1111/JTH.14418 REMARK 2 REMARK 2 RESOLUTION. 3.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.5 REMARK 3 NUMBER OF REFLECTIONS : 19431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.5300 - 7.8100 0.99 1786 196 0.2640 0.2721 REMARK 3 2 7.8100 - 6.2000 1.00 1623 181 0.2610 0.2985 REMARK 3 3 6.2000 - 5.4200 1.00 1569 174 0.2461 0.2843 REMARK 3 4 5.4200 - 4.9200 1.00 1574 175 0.2326 0.2673 REMARK 3 5 4.9200 - 4.5700 1.00 1544 171 0.2136 0.2421 REMARK 3 6 4.5700 - 4.3000 1.00 1548 172 0.2146 0.2337 REMARK 3 7 4.3000 - 4.0800 1.00 1518 169 0.2354 0.2877 REMARK 3 8 4.0800 - 3.9100 0.99 1529 170 0.2726 0.3106 REMARK 3 9 3.9100 - 3.7600 0.80 1199 133 0.2701 0.2936 REMARK 3 10 3.7500 - 3.6300 0.63 933 104 0.2765 0.3385 REMARK 3 11 3.6300 - 3.5100 0.53 803 89 0.2795 0.3528 REMARK 3 12 3.5100 - 3.4100 0.46 700 78 0.2979 0.3613 REMARK 3 13 3.4100 - 3.3200 0.40 602 68 0.2996 0.3506 REMARK 3 14 3.3200 - 3.2400 0.38 561 62 0.3101 0.3151 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 2 THROUGH 333 OR REMARK 3 RESID 335 THROUGH 401 OR RESID 403 REMARK 3 THROUGH 404)) REMARK 3 SELECTION : (CHAIN B AND (RESID 2 THROUGH 333 OR REMARK 3 RESID 335 THROUGH 401 OR RESID 403 REMARK 3 THROUGH 404)) REMARK 3 ATOM PAIRS NUMBER : 2156 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QOT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292119987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19451 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.240 REMARK 200 RESOLUTION RANGE LOW (A) : 75.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2F83, 4BDX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH8, 1.5M AMMONIUM SULFATE, REMARK 280 EVAPORATION, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 209.84933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 419.69867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 314.77400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 524.62333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 104.92467 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 209.84933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 419.69867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 524.62333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 314.77400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 104.92467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 LYS A 357 REMARK 465 MET A 358 REMARK 465 GLU B 1 REMARK 465 LYS B 357 REMARK 465 MET B 358 REMARK 465 SER C 565 REMARK 465 THR C 591 REMARK 465 THR C 592 REMARK 465 SER C 593 REMARK 465 PRO C 594 REMARK 465 LYS C 595 REMARK 465 SER D 565 REMARK 465 ASP D 566 REMARK 465 ASP D 567 REMARK 465 ASP D 568 REMARK 465 TRP D 569 REMARK 465 ILE D 570 REMARK 465 PRO D 571 REMARK 465 ASP D 572 REMARK 465 ILE D 573 REMARK 465 GLN D 574 REMARK 465 ILE D 575 REMARK 465 ASP D 590 REMARK 465 THR D 591 REMARK 465 THR D 592 REMARK 465 SER D 593 REMARK 465 PRO D 594 REMARK 465 LYS D 595 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASP C 566 REMARK 475 ASP C 567 REMARK 475 ASP C 568 REMARK 475 TRP C 569 REMARK 475 ILE C 570 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 8 CG CD CE REMARK 480 LYS A 103 CE REMARK 480 LYS A 113 CG CD CE NZ REMARK 480 ARG A 136 CZ REMARK 480 ARG A 159 CZ REMARK 480 LYS A 230 CG CD CE NZ REMARK 480 GLU A 231 CD REMARK 480 LYS A 252 CD CE NZ REMARK 480 LYS A 255 NZ REMARK 480 LYS A 301 CE REMARK 480 GLN A 318 C O CG REMARK 480 ALA A 319 C O REMARK 480 LYS B 8 CG CD CE REMARK 480 LYS B 26 CD REMARK 480 LYS B 103 CD REMARK 480 LYS B 113 CG CD CE NZ REMARK 480 ARG B 159 CZ REMARK 480 LYS B 230 CG CD CE NZ REMARK 480 GLU B 231 CD REMARK 480 LYS B 252 CD CE NZ REMARK 480 LYS B 255 NZ REMARK 480 LYS B 301 CE REMARK 480 GLN B 318 C O CG REMARK 480 ILE C 573 C REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 273 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 13 -71.06 -98.42 REMARK 500 GLU A 66 15.83 57.93 REMARK 500 ALA A 91 7.79 59.10 REMARK 500 SER A 110 -166.89 -119.42 REMARK 500 LEU A 177 -73.76 -107.92 REMARK 500 ASN A 179 109.67 -58.81 REMARK 500 ARG A 184 -123.21 46.33 REMARK 500 ALA A 193 79.17 -155.22 REMARK 500 CYS A 265 -86.02 -112.28 REMARK 500 ARG A 266 42.01 -141.60 REMARK 500 ILE A 269 50.16 -150.45 REMARK 500 ALA A 319 26.58 47.50 REMARK 500 LEU A 355 51.45 -112.56 REMARK 500 GLU B 66 14.04 59.81 REMARK 500 SER B 110 -166.93 -119.53 REMARK 500 LEU B 180 -78.74 -130.67 REMARK 500 ALA B 193 82.37 -158.67 REMARK 500 GLN B 263 17.94 46.28 REMARK 500 HIS B 267 -68.11 -98.97 REMARK 500 ALA B 317 58.62 -103.50 REMARK 500 GLN B 318 -118.40 61.56 REMARK 500 ASN B 322 -125.02 57.92 REMARK 500 LEU B 355 55.70 -110.00 REMARK 500 ASP C 567 -32.33 -141.87 REMARK 500 ASP C 568 136.93 -170.22 REMARK 500 ASN D 578 -162.36 -160.10 REMARK 500 SER D 581 99.34 -167.42 REMARK 500 REMARK 500 REMARK: NULL DBREF 7QOT A 1 358 UNP P03951 FA11_HUMAN 19 376 DBREF 7QOT B 1 358 UNP P03951 FA11_HUMAN 19 376 DBREF 7QOT C 565 595 UNP P01042 KNG1_HUMAN 583 613 DBREF 7QOT D 565 595 UNP P01042 KNG1_HUMAN 583 613 SEQRES 1 A 358 GLU CYS VAL THR GLN LEU LEU LYS ASP THR CYS PHE GLU SEQRES 2 A 358 GLY GLY ASP ILE THR THR VAL PHE THR PRO SER ALA LYS SEQRES 3 A 358 TYR CYS GLN VAL VAL CYS THR TYR HIS PRO ARG CYS LEU SEQRES 4 A 358 LEU PHE THR PHE THR ALA GLU SER PRO SER GLU ASP PRO SEQRES 5 A 358 THR ARG TRP PHE THR CYS VAL LEU LYS ASP SER VAL THR SEQRES 6 A 358 GLU THR LEU PRO ARG VAL ASN ARG THR ALA ALA ILE SER SEQRES 7 A 358 GLY TYR SER PHE LYS GLN CYS SER HIS GLN ILE SER ALA SEQRES 8 A 358 CYS ASN LYS ASP ILE TYR VAL ASP LEU ASP MET LYS GLY SEQRES 9 A 358 ILE ASN TYR ASN SER SER VAL ALA LYS SER ALA GLN GLU SEQRES 10 A 358 CYS GLN GLU ARG CYS THR ASP ASP VAL HIS CYS HIS PHE SEQRES 11 A 358 PHE THR TYR ALA THR ARG GLN PHE PRO SER LEU GLU HIS SEQRES 12 A 358 ARG ASN ILE CYS LEU LEU LYS HIS THR GLN THR GLY THR SEQRES 13 A 358 PRO THR ARG ILE THR LYS LEU ASP LYS VAL VAL SER GLY SEQRES 14 A 358 PHE SER LEU LYS SER CYS ALA LEU SER ASN LEU ALA CYS SEQRES 15 A 358 ILE ARG ASP ILE PHE PRO ASN THR VAL PHE ALA ASP SER SEQRES 16 A 358 ASN ILE ASP SER VAL MET ALA PRO ASP ALA PHE VAL CYS SEQRES 17 A 358 GLY ARG ILE CYS THR HIS HIS PRO GLY CYS LEU PHE PHE SEQRES 18 A 358 THR PHE PHE SER GLN GLU TRP PRO LYS GLU SER GLN ARG SEQRES 19 A 358 ASN LEU CYS LEU LEU LYS THR SER GLU SER GLY LEU PRO SEQRES 20 A 358 SER THR ARG ILE LYS LYS SER LYS ALA LEU SER GLY PHE SEQRES 21 A 358 SER LEU GLN SER CYS ARG HIS SER ILE PRO VAL PHE CYS SEQRES 22 A 358 HIS SER SER PHE TYR HIS ASP THR ASP PHE LEU GLY GLU SEQRES 23 A 358 GLU LEU ASP ILE VAL ALA ALA LYS SER HIS GLU ALA CYS SEQRES 24 A 358 GLN LYS LEU CYS THR ASN ALA VAL ARG CYS GLN PHE PHE SEQRES 25 A 358 THR TYR THR PRO ALA GLN ALA SER CYS ASN GLU GLY LYS SEQRES 26 A 358 GLY LYS CYS TYR LEU LYS LEU SER SER ASN GLY SER PRO SEQRES 27 A 358 THR LYS ILE LEU HIS GLY ARG GLY GLY ILE SER GLY TYR SEQRES 28 A 358 THR LEU ARG LEU CYS LYS MET SEQRES 1 B 358 GLU CYS VAL THR GLN LEU LEU LYS ASP THR CYS PHE GLU SEQRES 2 B 358 GLY GLY ASP ILE THR THR VAL PHE THR PRO SER ALA LYS SEQRES 3 B 358 TYR CYS GLN VAL VAL CYS THR TYR HIS PRO ARG CYS LEU SEQRES 4 B 358 LEU PHE THR PHE THR ALA GLU SER PRO SER GLU ASP PRO SEQRES 5 B 358 THR ARG TRP PHE THR CYS VAL LEU LYS ASP SER VAL THR SEQRES 6 B 358 GLU THR LEU PRO ARG VAL ASN ARG THR ALA ALA ILE SER SEQRES 7 B 358 GLY TYR SER PHE LYS GLN CYS SER HIS GLN ILE SER ALA SEQRES 8 B 358 CYS ASN LYS ASP ILE TYR VAL ASP LEU ASP MET LYS GLY SEQRES 9 B 358 ILE ASN TYR ASN SER SER VAL ALA LYS SER ALA GLN GLU SEQRES 10 B 358 CYS GLN GLU ARG CYS THR ASP ASP VAL HIS CYS HIS PHE SEQRES 11 B 358 PHE THR TYR ALA THR ARG GLN PHE PRO SER LEU GLU HIS SEQRES 12 B 358 ARG ASN ILE CYS LEU LEU LYS HIS THR GLN THR GLY THR SEQRES 13 B 358 PRO THR ARG ILE THR LYS LEU ASP LYS VAL VAL SER GLY SEQRES 14 B 358 PHE SER LEU LYS SER CYS ALA LEU SER ASN LEU ALA CYS SEQRES 15 B 358 ILE ARG ASP ILE PHE PRO ASN THR VAL PHE ALA ASP SER SEQRES 16 B 358 ASN ILE ASP SER VAL MET ALA PRO ASP ALA PHE VAL CYS SEQRES 17 B 358 GLY ARG ILE CYS THR HIS HIS PRO GLY CYS LEU PHE PHE SEQRES 18 B 358 THR PHE PHE SER GLN GLU TRP PRO LYS GLU SER GLN ARG SEQRES 19 B 358 ASN LEU CYS LEU LEU LYS THR SER GLU SER GLY LEU PRO SEQRES 20 B 358 SER THR ARG ILE LYS LYS SER LYS ALA LEU SER GLY PHE SEQRES 21 B 358 SER LEU GLN SER CYS ARG HIS SER ILE PRO VAL PHE CYS SEQRES 22 B 358 HIS SER SER PHE TYR HIS ASP THR ASP PHE LEU GLY GLU SEQRES 23 B 358 GLU LEU ASP ILE VAL ALA ALA LYS SER HIS GLU ALA CYS SEQRES 24 B 358 GLN LYS LEU CYS THR ASN ALA VAL ARG CYS GLN PHE PHE SEQRES 25 B 358 THR TYR THR PRO ALA GLN ALA SER CYS ASN GLU GLY LYS SEQRES 26 B 358 GLY LYS CYS TYR LEU LYS LEU SER SER ASN GLY SER PRO SEQRES 27 B 358 THR LYS ILE LEU HIS GLY ARG GLY GLY ILE SER GLY TYR SEQRES 28 B 358 THR LEU ARG LEU CYS LYS MET SEQRES 1 C 31 SER ASP ASP ASP TRP ILE PRO ASP ILE GLN ILE ASP PRO SEQRES 2 C 31 ASN GLY LEU SER PHE ASN PRO ILE SER ASP PHE PRO ASP SEQRES 3 C 31 THR THR SER PRO LYS SEQRES 1 D 31 SER ASP ASP ASP TRP ILE PRO ASP ILE GLN ILE ASP PRO SEQRES 2 D 31 ASN GLY LEU SER PHE ASN PRO ILE SER ASP PHE PRO ASP SEQRES 3 D 31 THR THR SER PRO LYS HET NAG A 401 14 HET NAG A 402 14 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET NAG B 401 14 HET SO4 B 402 5 HET SO4 B 403 5 HET SO4 B 404 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NAG 3(C8 H15 N O6) FORMUL 7 SO4 6(O4 S 2-) HELIX 1 AA1 SER A 24 HIS A 35 1 12 HELIX 2 AA2 ASP A 51 TRP A 55 5 5 HELIX 3 AA3 SER A 114 ASP A 125 1 12 HELIX 4 AA4 LEU A 172 ALA A 176 5 5 HELIX 5 AA5 ASP A 204 HIS A 215 1 12 HELIX 6 AA6 LYS A 230 ARG A 234 5 5 HELIX 7 AA7 SER A 295 ALA A 306 1 12 HELIX 8 AA8 SER B 24 HIS B 35 1 12 HELIX 9 AA9 ASP B 51 TRP B 55 5 5 HELIX 10 AB1 SER B 114 ASP B 125 1 12 HELIX 11 AB2 ASP B 204 HIS B 215 1 12 HELIX 12 AB3 LYS B 230 ARG B 234 5 5 HELIX 13 AB4 HIS B 267 CYS B 273 1 7 HELIX 14 AB5 SER B 295 ALA B 306 1 12 SHEET 1 AA1 2 THR A 10 PHE A 12 0 SHEET 2 AA1 2 ARG A 70 ASN A 72 -1 O VAL A 71 N CYS A 11 SHEET 1 AA2 4 ASP A 16 PHE A 21 0 SHEET 2 AA2 4 THR A 57 LYS A 61 -1 O LEU A 60 N ILE A 17 SHEET 3 AA2 4 LEU A 40 THR A 44 -1 N LEU A 40 O LYS A 61 SHEET 4 AA2 4 ALA A 76 TYR A 80 -1 O ILE A 77 N PHE A 43 SHEET 1 AA3 5 ILE A 96 VAL A 98 0 SHEET 2 AA3 5 VAL A 166 PHE A 170 -1 O SER A 168 N TYR A 97 SHEET 3 AA3 5 PHE A 130 ALA A 134 -1 N TYR A 133 O VAL A 167 SHEET 4 AA3 5 ILE A 146 HIS A 151 -1 O LEU A 148 N THR A 132 SHEET 5 AA3 5 ILE A 105 VAL A 111 -1 N SER A 110 O CYS A 147 SHEET 1 AA4 2 ASP A 101 LYS A 103 0 SHEET 2 AA4 2 ARG A 159 THR A 161 -1 O THR A 161 N ASP A 101 SHEET 1 AA5 5 ILE A 186 PHE A 187 0 SHEET 2 AA5 5 ALA A 256 PHE A 260 -1 O SER A 258 N PHE A 187 SHEET 3 AA5 5 PHE A 220 PHE A 224 -1 N PHE A 223 O LEU A 257 SHEET 4 AA5 5 LEU A 236 THR A 241 -1 O LEU A 238 N THR A 222 SHEET 5 AA5 5 SER A 195 MET A 201 -1 N VAL A 200 O CYS A 237 SHEET 1 AA6 2 VAL A 191 PHE A 192 0 SHEET 2 AA6 2 ARG A 250 ILE A 251 -1 O ILE A 251 N VAL A 191 SHEET 1 AA7 2 THR A 281 PHE A 283 0 SHEET 2 AA7 2 ILE A 341 HIS A 343 -1 O LEU A 342 N ASP A 282 SHEET 1 AA8 4 GLU A 286 ALA A 293 0 SHEET 2 AA8 4 GLY A 326 LEU A 332 -1 O LEU A 332 N GLU A 286 SHEET 3 AA8 4 PHE A 311 THR A 315 -1 N PHE A 311 O LYS A 331 SHEET 4 AA8 4 ILE A 348 TYR A 351 -1 O ILE A 348 N TYR A 314 SHEET 1 AA9 2 THR B 10 PHE B 12 0 SHEET 2 AA9 2 ARG B 70 ASN B 72 -1 O VAL B 71 N CYS B 11 SHEET 1 AB1 4 ASP B 16 PHE B 21 0 SHEET 2 AB1 4 THR B 57 LYS B 61 -1 O LEU B 60 N ILE B 17 SHEET 3 AB1 4 LEU B 40 THR B 44 -1 N LEU B 40 O LYS B 61 SHEET 4 AB1 4 ALA B 76 TYR B 80 -1 O ILE B 77 N PHE B 43 SHEET 1 AB2 5 ILE B 96 VAL B 98 0 SHEET 2 AB2 5 VAL B 166 PHE B 170 -1 O SER B 168 N TYR B 97 SHEET 3 AB2 5 PHE B 130 ALA B 134 -1 N TYR B 133 O VAL B 167 SHEET 4 AB2 5 ILE B 146 LYS B 150 -1 O LYS B 150 N PHE B 130 SHEET 5 AB2 5 ASN B 108 VAL B 111 -1 N SER B 110 O CYS B 147 SHEET 1 AB3 2 ASP B 101 MET B 102 0 SHEET 2 AB3 2 ILE B 160 THR B 161 -1 O THR B 161 N ASP B 101 SHEET 1 AB4 5 ILE B 183 PHE B 187 0 SHEET 2 AB4 5 ALA B 256 SER B 261 -1 O PHE B 260 N ARG B 184 SHEET 3 AB4 5 PHE B 220 PHE B 224 -1 N PHE B 223 O LEU B 257 SHEET 4 AB4 5 LEU B 236 THR B 241 -1 O LEU B 238 N THR B 222 SHEET 5 AB4 5 SER B 195 MET B 201 -1 N VAL B 200 O CYS B 237 SHEET 1 AB5 2 THR B 281 PHE B 283 0 SHEET 2 AB5 2 ILE B 341 HIS B 343 -1 O LEU B 342 N ASP B 282 SHEET 1 AB6 4 GLU B 286 ALA B 293 0 SHEET 2 AB6 4 GLY B 326 LEU B 332 -1 O LEU B 330 N LEU B 288 SHEET 3 AB6 4 PHE B 311 THR B 315 -1 N PHE B 311 O LYS B 331 SHEET 4 AB6 4 ILE B 348 TYR B 351 -1 O ILE B 348 N TYR B 314 SSBOND 1 CYS A 2 CYS A 85 1555 1555 2.03 SSBOND 2 CYS A 28 CYS A 58 1555 1555 2.02 SSBOND 3 CYS A 32 CYS A 38 1555 1555 2.03 SSBOND 4 CYS A 92 CYS A 175 1555 1555 2.02 SSBOND 5 CYS A 118 CYS A 147 1555 1555 2.03 SSBOND 6 CYS A 122 CYS A 128 1555 1555 2.03 SSBOND 7 CYS A 182 CYS A 265 1555 1555 2.03 SSBOND 8 CYS A 208 CYS A 237 1555 1555 2.03 SSBOND 9 CYS A 212 CYS A 218 1555 1555 2.03 SSBOND 10 CYS A 273 CYS A 356 1555 1555 2.03 SSBOND 11 CYS A 299 CYS A 328 1555 1555 2.03 SSBOND 12 CYS A 303 CYS A 309 1555 1555 2.03 SSBOND 13 CYS A 321 CYS B 321 1555 1555 2.02 SSBOND 14 CYS B 2 CYS B 85 1555 1555 2.03 SSBOND 15 CYS B 28 CYS B 58 1555 1555 2.03 SSBOND 16 CYS B 32 CYS B 38 1555 1555 2.03 SSBOND 17 CYS B 92 CYS B 175 1555 1555 2.02 SSBOND 18 CYS B 118 CYS B 147 1555 1555 2.03 SSBOND 19 CYS B 122 CYS B 128 1555 1555 2.03 SSBOND 20 CYS B 182 CYS B 265 1555 1555 2.01 SSBOND 21 CYS B 208 CYS B 237 1555 1555 2.03 SSBOND 22 CYS B 212 CYS B 218 1555 1555 2.02 SSBOND 23 CYS B 273 CYS B 356 1555 1555 2.03 SSBOND 24 CYS B 299 CYS B 328 1555 1555 2.03 SSBOND 25 CYS B 303 CYS B 309 1555 1555 2.03 LINK ND2 ASN A 72 C1 NAG A 401 1555 1555 1.45 LINK ND2 ASN A 108 C1 NAG A 402 1555 1555 1.46 LINK ND2 ASN B 108 C1 NAG B 401 1555 1555 1.46 CRYST1 87.319 87.319 629.548 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011452 0.006612 0.000000 0.00000 SCALE2 0.000000 0.013224 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001588 0.00000