HEADER HYDROLASE 05-JAN-22 7QPY TITLE X-RAY STRUCTURE OF THE ADDUCT OBTAINED UPON REACTION OF [CIS- TITLE 2 RH2(OCOCH3)2(OCOCF3)2] WITH RNASE A (3) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE PANCREATIC; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RNASE 1,RNASE A; COMPND 5 EC: 4.6.1.18 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913 KEYWDS PROTEIN METALATION, DIRHODIUM TETRAACETATE DERIVATIVE, HYDROLASE, KEYWDS 2 DIMETALLIC PADDLEWHEEL COMPLEXES EXPDTA X-RAY DIFFRACTION AUTHOR D.LORETO,A.MERLINO REVDAT 2 01-MAY-24 7QPY 1 REMARK REVDAT 1 16-MAR-22 7QPY 0 JRNL AUTH D.LORETO,A.ESPOSITO,N.DEMITRI,A.GUARAGNA,A.MERLINO JRNL TITL REACTIVITY OF A FLUORINE-CONTAINING DIRHODIUM JRNL TITL 2 TETRACARBOXYLATE COMPOUND WITH PROTEINS. JRNL REF DALTON TRANS V. 51 3695 2022 JRNL REFN ESSN 1477-9234 JRNL PMID 35166290 JRNL DOI 10.1039/D2DT00082B REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 44171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.239 REMARK 3 FREE R VALUE TEST SET COUNT : 2314 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2955 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1878 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 332 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02600 REMARK 3 B22 (A**2) : -0.00500 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.06600 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.194 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2075 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1771 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2859 ; 3.690 ; 1.716 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4110 ; 1.540 ; 1.588 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 262 ; 7.158 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;32.504 ;24.158 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 343 ;12.559 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;12.123 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 275 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2526 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 463 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 460 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 62 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 993 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 236 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.066 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1024 ; 2.196 ; 1.965 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1023 ; 2.196 ; 1.965 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1291 ; 3.414 ; 2.938 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1292 ; 3.413 ; 2.938 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1051 ; 2.686 ; 2.204 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1045 ; 2.678 ; 2.197 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1567 ; 4.112 ; 3.219 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1553 ; 4.018 ; 3.204 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7QPY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292120062. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROCESS REMARK 200 DATA SCALING SOFTWARE : AUTOPROCESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44454 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.115 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.52300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: !JVT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22 % PEG 4K 0.01 M SODIUM CITRATE PH REMARK 280 5.1, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.11000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 16.25000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.11000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.25000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 403 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 19 REMARK 465 ALA B 20 REMARK 465 SER B 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 1 CG CD CE NZ REMARK 470 LYS B 1 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN B 69 O HOH B 308 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 20 106.94 -41.46 REMARK 500 HIS A 48 61.44 -108.93 REMARK 500 GLN A 60 -140.49 -99.88 REMARK 500 GLN A 60 -140.49 -102.81 REMARK 500 ASN A 71 39.76 -93.85 REMARK 500 SER B 16 -61.15 -20.66 REMARK 500 HIS B 48 63.47 -106.29 REMARK 500 GLN B 60 -130.85 -111.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 F5I B 202 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3I A 202 RH3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 105 NE2 REMARK 620 2 F3I A 202 O9 97.8 REMARK 620 3 F3I A 202 O12 93.0 99.5 REMARK 620 4 F3I A 202 O14 91.5 75.7 173.8 REMARK 620 5 F3I A 202 O10 88.5 171.5 74.3 110.0 REMARK 620 6 F3I A 202 RH4 170.0 90.5 80.1 95.9 82.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5T A 201 RH1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 119 ND1 REMARK 620 2 F5T A 201 O3 85.3 REMARK 620 3 F5T A 201 O7 93.0 88.6 REMARK 620 4 F5T A 201 RH2 179.0 93.8 87.4 REMARK 620 5 F5T A 201 O0 91.2 92.1 175.8 88.5 REMARK 620 6 F5T A 201 O1 93.4 177.7 89.5 87.6 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5T A 201 RH2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 317 O REMARK 620 2 F5T A 201 O4 83.5 REMARK 620 3 F5T A 201 O8 94.0 87.0 REMARK 620 4 F5T A 201 RH1 173.9 90.7 87.5 REMARK 620 5 F5T A 201 O9 89.3 95.4 176.1 89.4 REMARK 620 6 F5T A 201 O2 99.0 176.0 89.7 87.0 87.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5I B 202 RH2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 105 NE2 REMARK 620 2 F5I B 202 O8 92.9 REMARK 620 3 F5I B 202 O4 95.7 80.4 REMARK 620 4 F5I B 202 RH1 176.6 87.4 87.6 REMARK 620 5 F5I B 202 O2 82.6 103.8 175.5 94.1 REMARK 620 6 F5I B 202 O5 86.1 178.7 98.9 93.6 76.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5I B 201 RH1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 119 ND1 REMARK 620 2 F5I B 201 O7 101.2 REMARK 620 3 F5I B 201 O3 98.3 89.3 REMARK 620 4 F5I B 201 RH2 159.5 92.6 97.0 REMARK 620 5 F5I B 201 O1 85.8 88.3 175.6 79.4 REMARK 620 6 F5I B 201 O6 83.7 175.1 89.8 82.8 92.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5I B 201 RH1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 119 ND1 REMARK 620 2 F5I B 201 O7 86.0 REMARK 620 3 F5I B 201 O3 84.4 71.1 REMARK 620 4 F5I B 201 RH2 171.7 86.0 90.7 REMARK 620 5 F5I B 201 O1 90.6 82.9 153.8 90.9 REMARK 620 6 F5I B 201 O6 89.7 157.7 86.6 96.8 119.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5I B 201 RH2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 338 O REMARK 620 2 F5I B 201 O8 77.2 REMARK 620 3 F5I B 201 O4 84.3 90.6 REMARK 620 4 F5I B 201 RH1 154.5 79.2 86.4 REMARK 620 5 F5I B 201 O2 96.4 88.0 178.3 92.3 REMARK 620 6 F5I B 201 O5 112.8 169.9 88.5 90.7 92.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F5I B 201 RH2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 338 O REMARK 620 2 F5I B 201 O8 87.5 REMARK 620 3 F5I B 201 O4 92.2 129.5 REMARK 620 4 F5I B 201 RH1 165.1 93.7 98.3 REMARK 620 5 F5I B 201 O2 83.1 83.8 146.2 82.3 REMARK 620 6 F5I B 201 O5 93.1 152.2 78.2 78.9 68.7 REMARK 620 N 1 2 3 4 5 DBREF 7QPY A 1 124 UNP P61823 RNAS1_BOVIN 27 150 DBREF 7QPY B 1 124 UNP P61823 RNAS1_BOVIN 27 150 SEQRES 1 A 124 LYS GLU THR ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 A 124 ASP SER SER THR SER ALA ALA SER SER SER ASN TYR CYS SEQRES 3 A 124 ASN GLN MET MET LYS SER ARG ASN LEU THR LYS ASP ARG SEQRES 4 A 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 A 124 ASP VAL GLN ALA VAL CYS SER GLN LYS ASN VAL ALA CYS SEQRES 6 A 124 LYS ASN GLY GLN THR ASN CYS TYR GLN SER TYR SER THR SEQRES 7 A 124 MET SER ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 A 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN ALA ASN LYS SEQRES 9 A 124 HIS ILE ILE VAL ALA CYS GLU GLY ASN PRO TYR VAL PRO SEQRES 10 A 124 VAL HIS PHE ASP ALA SER VAL SEQRES 1 B 124 LYS GLU THR ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 B 124 ASP SER SER THR SER ALA ALA SER SER SER ASN TYR CYS SEQRES 3 B 124 ASN GLN MET MET LYS SER ARG ASN LEU THR LYS ASP ARG SEQRES 4 B 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 B 124 ASP VAL GLN ALA VAL CYS SER GLN LYS ASN VAL ALA CYS SEQRES 6 B 124 LYS ASN GLY GLN THR ASN CYS TYR GLN SER TYR SER THR SEQRES 7 B 124 MET SER ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 B 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN ALA ASN LYS SEQRES 9 B 124 HIS ILE ILE VAL ALA CYS GLU GLY ASN PRO TYR VAL PRO SEQRES 10 B 124 VAL HIS PHE ASP ALA SER VAL HET F5T A 201 19 HET F3I A 202 14 HET F5I B 201 28 HET F5I B 202 13 HETNAM F5T CIS-BIS(MI2-ACETATO-O, O')-(MI2-TRIFLUOROACETATO-O, HETNAM 2 F5T O')-DIAQUO-DIRHODIUM (II) HETNAM F3I (MI2-ACETATO-O, O')-HEXAAQUO-DIRHODIUM (II) HETNAM F5I CIS-BIS(MI2-ACETATO-O, O')-TETRAAQUO-DIRHODIUM(II) FORMUL 3 F5T C6 H11 F3 O8 RH2 2+ FORMUL 4 F3I C2 H10 O8 RH2 2+ FORMUL 5 F5I 2(C4 H12 O8 RH2 2+) FORMUL 7 HOH *332(H2 O) HELIX 1 AA1 THR A 3 MET A 13 1 11 HELIX 2 AA2 ASN A 24 ARG A 33 1 10 HELIX 3 AA3 SER A 50 ALA A 56 1 7 HELIX 4 AA4 VAL A 57 GLN A 60 5 4 HELIX 5 AA5 THR B 3 MET B 13 1 11 HELIX 6 AA6 ASN B 24 ARG B 33 1 10 HELIX 7 AA7 SER B 50 VAL B 57 1 8 HELIX 8 AA8 CYS B 58 GLN B 60 5 3 SHEET 1 AA1 5 VAL A 43 VAL A 47 0 SHEET 2 AA1 5 MET A 79 GLU A 86 -1 O THR A 82 N PHE A 46 SHEET 3 AA1 5 TYR A 97 GLU A 111 -1 O THR A 100 N ASP A 83 SHEET 4 AA1 5 CYS A 72 GLN A 74 -1 N TYR A 73 O VAL A 108 SHEET 5 AA1 5 LYS A 61 VAL A 63 -1 N LYS A 61 O GLN A 74 SHEET 1 AA2 4 VAL A 43 VAL A 47 0 SHEET 2 AA2 4 MET A 79 GLU A 86 -1 O THR A 82 N PHE A 46 SHEET 3 AA2 4 TYR A 97 GLU A 111 -1 O THR A 100 N ASP A 83 SHEET 4 AA2 4 VAL A 116 VAL A 124 -1 O VAL A 118 N ALA A 109 SHEET 1 AA3 5 VAL B 43 VAL B 47 0 SHEET 2 AA3 5 MET B 79 GLU B 86 -1 O THR B 82 N PHE B 46 SHEET 3 AA3 5 TYR B 97 GLU B 111 -1 O THR B 100 N ASP B 83 SHEET 4 AA3 5 CYS B 72 GLN B 74 -1 N TYR B 73 O VAL B 108 SHEET 5 AA3 5 LYS B 61 VAL B 63 -1 N LYS B 61 O GLN B 74 SHEET 1 AA4 4 VAL B 43 VAL B 47 0 SHEET 2 AA4 4 MET B 79 GLU B 86 -1 O THR B 82 N PHE B 46 SHEET 3 AA4 4 TYR B 97 GLU B 111 -1 O THR B 100 N ASP B 83 SHEET 4 AA4 4 VAL B 116 VAL B 124 -1 O VAL B 118 N ALA B 109 SSBOND 1 CYS A 26 CYS A 84 1555 1555 2.03 SSBOND 2 CYS A 40 CYS A 95 1555 1555 2.02 SSBOND 3 CYS A 58 CYS A 110 1555 1555 2.06 SSBOND 4 CYS A 65 CYS A 72 1555 1555 2.08 SSBOND 5 CYS B 26 CYS B 84 1555 1555 2.02 SSBOND 6 CYS B 40 CYS B 95 1555 1555 2.05 SSBOND 7 CYS B 58 CYS B 110 1555 1555 2.07 SSBOND 8 CYS B 65 CYS B 72 1555 1555 2.04 LINK NE2 HIS A 105 RH3 F3I A 202 1555 1555 2.11 LINK ND1 HIS A 119 RH1 F5T A 201 1555 1555 2.25 LINK RH2 F5T A 201 O HOH B 317 1555 3455 2.13 LINK NE2 HIS B 105 RH2 AF5I B 202 1555 1555 2.23 LINK ND1 HIS B 119 RH1 AF5I B 201 1555 1555 2.16 LINK ND1 HIS B 119 RH1 BF5I B 201 1555 1555 2.27 LINK RH2 AF5I B 201 O HOH B 338 1555 1555 2.39 LINK RH2 BF5I B 201 O HOH B 338 1555 1555 2.40 CISPEP 1 TYR A 92 PRO A 93 0 6.32 CISPEP 2 ASN A 113 PRO A 114 0 13.54 CISPEP 3 TYR B 92 PRO B 93 0 9.47 CISPEP 4 ASN B 113 PRO B 114 0 1.69 CRYST1 100.220 32.500 72.380 90.00 90.41 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009978 0.000000 0.000071 0.00000 SCALE2 0.000000 0.030769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013816 0.00000