HEADER LIGASE 12-JAN-22 7QS1 TITLE CRYSTAL STRUCTURE OF B30.2 PRYSPRY DOMAIN OF TRIM11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE TRIM11; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN BIA1,RING FINGER PROTEIN 92,RING-TYPE E3 UBIQUITIN COMPND 5 TRANSFERASE TRIM11,TRIPARTITE MOTIF-CONTAINING PROTEIN 11; COMPND 6 EC: 2.3.2.27; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRIM11, RNF92; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: -R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGTVL2 KEYWDS E3, TRIM, TRIM11, B30.2 DOMAIN, SPRY DOMAIN, PRYSPRY DOMAIN, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 31-JAN-24 7QS1 1 REMARK REVDAT 1 04-MAY-22 7QS1 0 JRNL AUTH A.CHAIKUAD,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF B30.2 PRYSPRY DOMAIN OF TRIM11 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 26443 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1407 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1932 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.2420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2829 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.56000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.779 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2958 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2759 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3997 ; 1.459 ; 1.664 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6352 ; 1.251 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 360 ; 8.247 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;27.172 ;19.318 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 458 ;12.730 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;21.676 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 358 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3302 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 728 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 276 459 B 276 459 5076 0.130 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 276 A 381 REMARK 3 ORIGIN FOR THE GROUP (A): 73.5579 2.8289 51.6436 REMARK 3 T TENSOR REMARK 3 T11: 0.0960 T22: 0.1661 REMARK 3 T33: 0.0576 T12: -0.0162 REMARK 3 T13: -0.0099 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.3744 L22: 0.8497 REMARK 3 L33: 3.5277 L12: -0.0685 REMARK 3 L13: -0.9032 L23: 1.1905 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: 0.0458 S13: -0.0346 REMARK 3 S21: -0.0731 S22: -0.0908 S23: 0.0630 REMARK 3 S31: -0.0885 S32: -0.2521 S33: 0.1247 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 382 A 400 REMARK 3 ORIGIN FOR THE GROUP (A): 46.9558 10.5887 48.2870 REMARK 3 T TENSOR REMARK 3 T11: 0.0987 T22: 0.1332 REMARK 3 T33: 0.2384 T12: -0.0673 REMARK 3 T13: 0.0187 T23: -0.0838 REMARK 3 L TENSOR REMARK 3 L11: 4.7378 L22: 2.0143 REMARK 3 L33: 5.5174 L12: -1.4767 REMARK 3 L13: 2.9715 L23: 1.0758 REMARK 3 S TENSOR REMARK 3 S11: -0.1516 S12: -0.2642 S13: 0.4044 REMARK 3 S21: 0.0643 S22: 0.1256 S23: 0.0192 REMARK 3 S31: -0.2454 S32: 0.1696 S33: 0.0260 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 459 REMARK 3 ORIGIN FOR THE GROUP (A): 67.5320 4.6137 58.1332 REMARK 3 T TENSOR REMARK 3 T11: 0.0533 T22: 0.2499 REMARK 3 T33: 0.0242 T12: -0.0437 REMARK 3 T13: -0.0035 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 2.0922 L22: 1.1636 REMARK 3 L33: 3.0133 L12: -0.5806 REMARK 3 L13: -1.0140 L23: 0.5595 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: 0.1046 S13: -0.0429 REMARK 3 S21: 0.1089 S22: -0.1996 S23: 0.0930 REMARK 3 S31: 0.0303 S32: -0.4365 S33: 0.2144 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 276 B 380 REMARK 3 ORIGIN FOR THE GROUP (A): 36.8741 -4.9761 44.1073 REMARK 3 T TENSOR REMARK 3 T11: 0.0621 T22: 0.1175 REMARK 3 T33: 0.0356 T12: -0.0105 REMARK 3 T13: 0.0116 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.7012 L22: 0.5912 REMARK 3 L33: 1.4867 L12: -0.1074 REMARK 3 L13: -0.3757 L23: -0.1998 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: -0.0217 S13: 0.0673 REMARK 3 S21: -0.0056 S22: -0.0357 S23: 0.0347 REMARK 3 S31: 0.0497 S32: 0.0255 S33: -0.0131 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 381 B 398 REMARK 3 ORIGIN FOR THE GROUP (A): 54.4738 -1.4409 40.2194 REMARK 3 T TENSOR REMARK 3 T11: 0.1117 T22: 0.3058 REMARK 3 T33: 0.1617 T12: -0.0224 REMARK 3 T13: 0.0133 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 7.9970 L22: 1.6181 REMARK 3 L33: 4.5097 L12: -2.9991 REMARK 3 L13: -3.9060 L23: 2.5361 REMARK 3 S TENSOR REMARK 3 S11: -0.2961 S12: 0.6179 S13: -0.1715 REMARK 3 S21: 0.1458 S22: 0.0217 S23: 0.2276 REMARK 3 S31: 0.2095 S32: 0.3872 S33: 0.2744 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 399 B 459 REMARK 3 ORIGIN FOR THE GROUP (A): 40.8914 -3.1905 51.9966 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.1444 REMARK 3 T33: 0.0125 T12: -0.0353 REMARK 3 T13: 0.0069 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.3356 L22: 1.1897 REMARK 3 L33: 1.6999 L12: -0.1003 REMARK 3 L13: -0.3154 L23: 0.1061 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: -0.1045 S13: 0.0270 REMARK 3 S21: 0.1381 S22: -0.0279 S23: 0.0198 REMARK 3 S31: 0.0349 S32: 0.1080 S33: 0.0393 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7QS1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120181. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27861 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 43.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.76400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IWG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 10% ETHYLENE GLYCOL, 0.2M REMARK 280 SODIUM SULFATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.00900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 275 REMARK 465 GLY A 460 REMARK 465 SER A 461 REMARK 465 SER B 275 REMARK 465 TYR B 387 REMARK 465 ASN B 388 REMARK 465 SER B 389 REMARK 465 SER B 390 REMARK 465 GLU B 391 REMARK 465 ARG B 392 REMARK 465 ALA B 393 REMARK 465 LEU B 394 REMARK 465 ALA B 395 REMARK 465 GLY B 460 REMARK 465 SER B 461 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 276 CG SD CE REMARK 470 MET B 276 CG SD CE REMARK 470 TYR B 386 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 326 115.65 -169.74 REMARK 500 SER A 353 114.40 -166.25 REMARK 500 SER A 390 -156.96 -131.41 REMARK 500 ALA A 393 -142.32 -138.68 REMARK 500 ASP B 326 119.02 -167.47 REMARK 500 REMARK 500 REMARK: NULL DBREF 7QS1 A 277 461 UNP Q96F44 TRI11_HUMAN 277 461 DBREF 7QS1 B 277 461 UNP Q96F44 TRI11_HUMAN 277 461 SEQADV 7QS1 SER A 275 UNP Q96F44 EXPRESSION TAG SEQADV 7QS1 MET A 276 UNP Q96F44 EXPRESSION TAG SEQADV 7QS1 SER B 275 UNP Q96F44 EXPRESSION TAG SEQADV 7QS1 MET B 276 UNP Q96F44 EXPRESSION TAG SEQRES 1 A 187 SER MET GLY LEU VAL GLU THR LEU ARG ARG PHE ARG GLY SEQRES 2 A 187 ASP VAL THR LEU ASP PRO ASP THR ALA ASN PRO GLU LEU SEQRES 3 A 187 ILE LEU SER GLU ASP ARG ARG SER VAL GLN ARG GLY ASP SEQRES 4 A 187 LEU ARG GLN ALA LEU PRO ASP SER PRO GLU ARG PHE ASP SEQRES 5 A 187 PRO GLY PRO CYS VAL LEU GLY GLN GLU ARG PHE THR SER SEQRES 6 A 187 GLY ARG HIS TYR TRP GLU VAL GLU VAL GLY ASP ARG THR SEQRES 7 A 187 SER TRP ALA LEU GLY VAL CYS ARG GLU ASN VAL ASN ARG SEQRES 8 A 187 LYS GLU LYS GLY GLU LEU SER ALA GLY ASN GLY PHE TRP SEQRES 9 A 187 ILE LEU VAL PHE LEU GLY SER TYR TYR ASN SER SER GLU SEQRES 10 A 187 ARG ALA LEU ALA PRO LEU ARG ASP PRO PRO ARG ARG VAL SEQRES 11 A 187 GLY ILE PHE LEU ASP TYR GLU ALA GLY HIS LEU SER PHE SEQRES 12 A 187 TYR SER ALA THR ASP GLY SER LEU LEU PHE ILE PHE PRO SEQRES 13 A 187 GLU ILE PRO PHE SER GLY THR LEU ARG PRO LEU PHE SER SEQRES 14 A 187 PRO LEU SER SER SER PRO THR PRO MET THR ILE CYS ARG SEQRES 15 A 187 PRO LYS GLY GLY SER SEQRES 1 B 187 SER MET GLY LEU VAL GLU THR LEU ARG ARG PHE ARG GLY SEQRES 2 B 187 ASP VAL THR LEU ASP PRO ASP THR ALA ASN PRO GLU LEU SEQRES 3 B 187 ILE LEU SER GLU ASP ARG ARG SER VAL GLN ARG GLY ASP SEQRES 4 B 187 LEU ARG GLN ALA LEU PRO ASP SER PRO GLU ARG PHE ASP SEQRES 5 B 187 PRO GLY PRO CYS VAL LEU GLY GLN GLU ARG PHE THR SER SEQRES 6 B 187 GLY ARG HIS TYR TRP GLU VAL GLU VAL GLY ASP ARG THR SEQRES 7 B 187 SER TRP ALA LEU GLY VAL CYS ARG GLU ASN VAL ASN ARG SEQRES 8 B 187 LYS GLU LYS GLY GLU LEU SER ALA GLY ASN GLY PHE TRP SEQRES 9 B 187 ILE LEU VAL PHE LEU GLY SER TYR TYR ASN SER SER GLU SEQRES 10 B 187 ARG ALA LEU ALA PRO LEU ARG ASP PRO PRO ARG ARG VAL SEQRES 11 B 187 GLY ILE PHE LEU ASP TYR GLU ALA GLY HIS LEU SER PHE SEQRES 12 B 187 TYR SER ALA THR ASP GLY SER LEU LEU PHE ILE PHE PRO SEQRES 13 B 187 GLU ILE PRO PHE SER GLY THR LEU ARG PRO LEU PHE SER SEQRES 14 B 187 PRO LEU SER SER SER PRO THR PRO MET THR ILE CYS ARG SEQRES 15 B 187 PRO LYS GLY GLY SER HET SO4 A 501 5 HET SO4 A 502 5 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET SO4 B 501 5 HET EDO B 502 4 HET EDO B 503 4 HET EDO B 504 4 HET EDO B 505 4 HET EDO B 506 4 HET EDO B 507 4 HET EDO B 508 4 HET EDO B 509 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 3(O4 S 2-) FORMUL 5 EDO 11(C2 H6 O2) FORMUL 17 HOH *131(H2 O) HELIX 1 AA1 GLY A 277 ARG A 283 1 7 HELIX 2 AA2 ARG A 284 ARG A 286 5 3 HELIX 3 AA3 ASP A 292 ALA A 296 5 5 HELIX 4 AA4 SER A 372 ASN A 375 5 4 HELIX 5 AA5 GLY B 277 ARG B 283 1 7 HELIX 6 AA6 ARG B 284 ARG B 286 5 3 HELIX 7 AA7 ASP B 292 ALA B 296 5 5 HELIX 8 AA8 SER B 372 ASN B 375 5 4 SHEET 1 AA1 7 LEU A 300 LEU A 302 0 SHEET 2 AA1 7 SER A 308 ARG A 311 -1 O GLN A 310 N ILE A 301 SHEET 3 AA1 7 MET A 452 ILE A 454 -1 O MET A 452 N VAL A 309 SHEET 4 AA1 7 ARG A 341 GLU A 347 -1 N GLU A 347 O THR A 453 SHEET 5 AA1 7 ARG A 403 ASP A 409 -1 O LEU A 408 N HIS A 342 SHEET 6 AA1 7 HIS A 414 SER A 419 -1 O HIS A 414 N ASP A 409 SHEET 7 AA1 7 SER A 424 ILE A 428 -1 O LEU A 426 N PHE A 417 SHEET 1 AA2 4 VAL A 331 LEU A 332 0 SHEET 2 AA2 4 LEU A 438 PRO A 444 -1 O PHE A 442 N VAL A 331 SHEET 3 AA2 4 TRP A 354 ARG A 360 -1 N CYS A 359 O ARG A 439 SHEET 4 AA2 4 PHE A 377 PHE A 382 -1 O LEU A 380 N LEU A 356 SHEET 1 AA3 6 LEU A 394 PRO A 396 0 SHEET 2 AA3 6 GLY A 384 SER A 389 -1 N ASN A 388 O ALA A 395 SHEET 3 AA3 6 PHE B 377 GLY B 384 -1 O VAL B 381 N TYR A 387 SHEET 4 AA3 6 TRP B 354 ARG B 360 -1 N LEU B 356 O LEU B 380 SHEET 5 AA3 6 LEU B 438 PRO B 444 -1 O ARG B 439 N CYS B 359 SHEET 6 AA3 6 VAL B 331 LEU B 332 -1 N VAL B 331 O PHE B 442 SHEET 1 AA4 7 LEU B 300 LEU B 302 0 SHEET 2 AA4 7 SER B 308 ARG B 311 -1 O GLN B 310 N ILE B 301 SHEET 3 AA4 7 MET B 452 ILE B 454 -1 O MET B 452 N VAL B 309 SHEET 4 AA4 7 ARG B 341 GLY B 349 -1 N GLU B 347 O THR B 453 SHEET 5 AA4 7 PRO B 401 ASP B 409 -1 O LEU B 408 N HIS B 342 SHEET 6 AA4 7 HIS B 414 SER B 419 -1 O HIS B 414 N ASP B 409 SHEET 7 AA4 7 SER B 424 ILE B 428 -1 O LEU B 426 N PHE B 417 CISPEP 1 ASP A 326 PRO A 327 0 8.23 CISPEP 2 ASP B 326 PRO B 327 0 7.44 CRYST1 65.636 42.018 68.584 90.00 99.44 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015236 0.000000 0.002533 0.00000 SCALE2 0.000000 0.023799 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014781 0.00000