HEADER LYASE 14-JAN-22 7QSW TITLE L8S8-COMPLEX FORMING RUBISCO DERIVED FROM ANCESTRAL SEQUENCE TITLE 2 RECONSTRUCTION OF THE LAST COMMON ANCESTOR OF SSU-BEARING FORM I TITLE 3 RUBISCOS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUBISCO LARGE SUBUNIT; COMPND 3 CHAIN: A, C, E, G; COMPND 4 EC: 4.1.1.39; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RUBISCO SMALL SUBUNIT; COMPND 8 CHAIN: B, D, F, H; COMPND 9 EC: 4.1.1.39; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: ARCTICEXPRESS (DE3); SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 12 EXPRESSION_SYSTEM_VARIANT: ARCTICEXPRESS (DE3) KEYWDS RIBULOSE 1, 5-BISPHOSPHATE CARBOXYLASE/OXYDASE, RUBISCO, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.ZARZYCKI,L.SCHULZ,T.J.ERB,G.K.A.HOCHBERG REVDAT 3 31-JAN-24 7QSW 1 REMARK REVDAT 2 26-OCT-22 7QSW 1 JRNL REVDAT 1 12-OCT-22 7QSW 0 JRNL AUTH L.SCHULZ,Z.GUO,J.ZARZYCKI,W.STEINCHEN,J.M.SCHULLER, JRNL AUTH 2 T.HEIMERL,S.PRINZ,O.MUELLER-CAJAR,T.J.ERB,G.K.A.HOCHBERG JRNL TITL EVOLUTION OF INCREASED COMPLEXITY AND SPECIFICITY AT THE JRNL TITL 2 DAWN OF FORM I RUBISCOS. JRNL REF SCIENCE V. 378 155 2022 JRNL REFN ESSN 1095-9203 JRNL PMID 36227987 JRNL DOI 10.1126/SCIENCE.ABQ1416 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.520 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 247525 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.159 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 81.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9600 - 4.3200 1.00 18399 148 0.1392 0.1368 REMARK 3 2 4.3200 - 3.4400 1.00 17821 146 0.1205 0.1430 REMARK 3 3 3.4400 - 3.0100 1.00 17631 144 0.1393 0.1704 REMARK 3 4 3.0100 - 2.7300 1.00 17588 143 0.1422 0.1516 REMARK 3 5 2.7300 - 2.5400 1.00 17532 143 0.1417 0.1615 REMARK 3 6 2.5400 - 2.3900 1.00 17503 142 0.1390 0.1603 REMARK 3 7 2.3900 - 2.2700 1.00 17422 143 0.1392 0.1550 REMARK 3 8 2.2700 - 2.1700 1.00 17416 141 0.1388 0.1732 REMARK 3 9 2.1700 - 2.0900 1.00 17444 143 0.1396 0.1626 REMARK 3 10 2.0900 - 2.0100 1.00 17395 141 0.1450 0.1578 REMARK 3 11 2.0100 - 1.9500 1.00 17360 142 0.1501 0.1978 REMARK 3 12 1.9500 - 1.8900 1.00 17346 141 0.1651 0.1853 REMARK 3 13 1.8900 - 1.8400 1.00 17327 141 0.1847 0.2015 REMARK 3 14 1.8400 - 1.8000 1.00 17342 141 0.2059 0.2345 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 78.4317 77.4245 74.0743 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.1609 REMARK 3 T33: 0.1642 T12: -0.0214 REMARK 3 T13: -0.0055 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.1248 L22: 0.1190 REMARK 3 L33: 0.2384 L12: -0.0033 REMARK 3 L13: -0.0040 L23: -0.0083 REMARK 3 S TENSOR REMARK 3 S11: 0.0007 S12: 0.0170 S13: 0.0113 REMARK 3 S21: 0.0080 S22: -0.0051 S23: -0.0483 REMARK 3 S31: -0.0344 S32: 0.0676 S33: 0.0044 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7QSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1292120046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20210323 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 247678 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.963 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12300 REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.80 REMARK 200 R MERGE FOR SHELL (I) : 1.01500 REMARK 200 R SYM FOR SHELL (I) : 1.01500 REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.18.2_3874 REMARK 200 STARTING MODEL: 6URA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PURIFIED ENZYME (1.5 MG/ML) IN 25 MM REMARK 280 TRICINE-NAOH, 75 MM NACL, PH 8.0 WAS INCUBATED AT 3% (V/V) CO2 REMARK 280 IN AIR AND 30 DEGREES C FOR 1 H IN THE PRESENCE OF 0.125 MM CABP REMARK 280 AND 2 MM MGCL2. THE ENZYME WAS THEN MIXED IN A 1:1 RATIO WITH REMARK 280 0.2 M BIS-TRIS PROPANE, 20 % (W/V) POLYETHYLENE GLYCOL 4000, PH REMARK 280 9.4. BEFORE FLASH FREEZING THE CRYSTALS IN LIQUID NITROGEN REMARK 280 PEG200 WAS ADDED TO THE MOTHER LIQUOR AS CRYOPROTECTANT TO A REMARK 280 FINAL CONCENTRATION OF 33 % (W/V)., VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 152.73150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 65.93650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 65.93650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 229.09725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 65.93650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 65.93650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.36575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 65.93650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.93650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 229.09725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 65.93650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.93650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 76.36575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 152.73150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXADECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXADECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 88420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 121520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -351.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 131.87300 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 131.87300 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 152.73150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 755 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 806 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 923 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 953 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 999 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 740 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 763 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 890 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 906 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 969 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 ASN A 5 REMARK 465 MET A 6 REMARK 465 SER A 7 REMARK 465 LYS A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 476 REMARK 465 HIS B 103 REMARK 465 HIS B 104 REMARK 465 HIS B 105 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 THR C 3 REMARK 465 ASN C 4 REMARK 465 ASN C 5 REMARK 465 MET C 6 REMARK 465 SER C 7 REMARK 465 LYS C 8 REMARK 465 ALA C 476 REMARK 465 HIS D 103 REMARK 465 HIS D 104 REMARK 465 HIS D 105 REMARK 465 MET E 1 REMARK 465 SER E 2 REMARK 465 THR E 3 REMARK 465 ASN E 4 REMARK 465 ASN E 5 REMARK 465 MET E 6 REMARK 465 SER E 7 REMARK 465 LYS E 8 REMARK 465 ALA E 9 REMARK 465 ALA E 476 REMARK 465 HIS F 103 REMARK 465 HIS F 104 REMARK 465 HIS F 105 REMARK 465 MET G 1 REMARK 465 SER G 2 REMARK 465 THR G 3 REMARK 465 ASN G 4 REMARK 465 ASN G 5 REMARK 465 MET G 6 REMARK 465 SER G 7 REMARK 465 LYS G 8 REMARK 465 ALA G 9 REMARK 465 ALA G 476 REMARK 465 HIS H 103 REMARK 465 HIS H 104 REMARK 465 HIS H 105 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH E 602 O HOH E 953 1.99 REMARK 500 O HOH A 965 O HOH E 875 2.03 REMARK 500 O HOH C 958 O HOH C 962 2.11 REMARK 500 O HOH C 956 O HOH C 960 2.12 REMARK 500 O HOH E 723 O HOH E 819 2.13 REMARK 500 O HOH A 945 O HOH A 957 2.13 REMARK 500 O HOH A 640 O HOH A 673 2.15 REMARK 500 O HOH C 722 O HOH C 868 2.17 REMARK 500 OE1 GLU A 253 O HOH A 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 60 -83.33 -136.00 REMARK 500 HIS A 151 -56.60 -132.73 REMARK 500 CYS A 170 122.38 -174.63 REMARK 500 ASN A 205 -90.90 -123.37 REMARK 500 MET A 210 110.42 -165.71 REMARK 500 MET A 295 -8.55 88.40 REMARK 500 VAL A 329 -49.76 71.05 REMARK 500 GLU B 4 -138.10 67.03 REMARK 500 LYS B 50 -142.99 63.51 REMARK 500 GLN B 88 71.38 55.37 REMARK 500 SER C 60 -82.60 -137.22 REMARK 500 HIS C 151 -58.36 -132.29 REMARK 500 CYS C 170 122.04 -175.81 REMARK 500 ASN C 205 -91.08 -122.58 REMARK 500 MET C 210 110.30 -165.66 REMARK 500 MET C 295 -9.81 87.14 REMARK 500 VAL C 329 -49.41 72.56 REMARK 500 GLU D 4 -136.54 65.03 REMARK 500 PHE D 6 3.50 81.23 REMARK 500 LYS D 50 -141.56 64.30 REMARK 500 GLN D 88 71.14 55.54 REMARK 500 SER E 60 -82.58 -136.36 REMARK 500 HIS E 151 -55.27 -134.84 REMARK 500 CYS E 170 124.09 -172.64 REMARK 500 ASN E 205 -91.46 -121.98 REMARK 500 MET E 210 109.99 -165.86 REMARK 500 MET E 295 -8.42 87.20 REMARK 500 VAL E 329 -51.52 71.41 REMARK 500 ASP E 355 93.98 -160.64 REMARK 500 GLU F 4 -136.34 66.38 REMARK 500 LYS F 50 -142.75 63.42 REMARK 500 GLN F 88 70.88 56.34 REMARK 500 SER G 60 -82.15 -138.11 REMARK 500 HIS G 151 -56.30 -131.93 REMARK 500 CYS G 170 122.29 -175.21 REMARK 500 ASN G 205 -90.58 -123.81 REMARK 500 MET G 210 111.68 -166.74 REMARK 500 MET G 295 -8.14 88.44 REMARK 500 VAL G 329 -50.42 71.49 REMARK 500 ASP G 355 92.26 -160.26 REMARK 500 GLU H 4 -136.13 65.32 REMARK 500 LYS H 50 -141.35 64.23 REMARK 500 GLN H 88 71.19 55.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1034 DISTANCE = 7.52 ANGSTROMS REMARK 525 HOH C1071 DISTANCE = 7.43 ANGSTROMS REMARK 525 HOH C1072 DISTANCE = 7.49 ANGSTROMS REMARK 525 HOH C1073 DISTANCE = 8.39 ANGSTROMS REMARK 525 HOH E1012 DISTANCE = 7.19 ANGSTROMS REMARK 525 HOH E1013 DISTANCE = 7.44 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 KCX A 199 OQ2 REMARK 620 2 ASP A 201 OD1 86.2 REMARK 620 3 GLU A 202 OE1 92.2 90.9 REMARK 620 4 CAP A 501 O2 94.3 105.1 163.1 REMARK 620 5 CAP A 501 O3 86.0 172.2 88.9 76.1 REMARK 620 6 CAP A 501 O7 168.5 97.7 98.5 74.2 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 KCX C 199 OQ1 REMARK 620 2 ASP C 201 OD1 85.6 REMARK 620 3 GLU C 202 OE1 94.6 92.3 REMARK 620 4 CAP C 501 O2 93.1 105.4 161.2 REMARK 620 5 CAP C 501 O3 87.9 173.4 87.1 76.1 REMARK 620 6 CAP C 501 O6 166.1 99.3 98.1 73.1 87.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 KCX E 199 OQ2 REMARK 620 2 ASP E 201 OD1 87.2 REMARK 620 3 GLU E 202 OE1 95.3 91.4 REMARK 620 4 CAP E 501 O2 93.4 106.4 160.6 REMARK 620 5 CAP E 501 O3 90.3 177.0 87.2 75.4 REMARK 620 6 CAP E 501 O7 166.3 96.6 97.8 72.9 86.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG G 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 KCX G 199 OQ1 REMARK 620 2 ASP G 201 OD1 86.3 REMARK 620 3 GLU G 202 OE1 92.2 92.5 REMARK 620 4 CAP G 501 O2 93.7 104.4 162.4 REMARK 620 5 CAP G 501 O3 86.1 172.4 87.9 76.0 REMARK 620 6 CAP G 501 O6 166.5 99.4 99.7 73.1 88.0 REMARK 620 N 1 2 3 4 5 DBREF 7QSW A 1 476 PDB 7QSW 7QSW 1 476 DBREF 7QSW B 1 105 PDB 7QSW 7QSW 1 105 DBREF 7QSW C 1 476 PDB 7QSW 7QSW 1 476 DBREF 7QSW D 1 105 PDB 7QSW 7QSW 1 105 DBREF 7QSW E 1 476 PDB 7QSW 7QSW 1 476 DBREF 7QSW F 1 105 PDB 7QSW 7QSW 1 105 DBREF 7QSW G 1 476 PDB 7QSW 7QSW 1 476 DBREF 7QSW H 1 105 PDB 7QSW 7QSW 1 105 SEQRES 1 A 476 MET SER THR ASN ASN MET SER LYS ALA ALA TYR GLU ALA SEQRES 2 A 476 GLY VAL LYS GLU TYR ARG GLN THR TYR TYR ASP PRO ASP SEQRES 3 A 476 TYR THR PRO LYS ASP THR ASP ILE LEU ALA ALA PHE ARG SEQRES 4 A 476 ILE THR PRO GLN PRO GLY VAL PRO PRO GLU GLU ALA ALA SEQRES 5 A 476 ALA ALA VAL ALA ALA GLU SER SER THR GLY THR TRP THR SEQRES 6 A 476 THR VAL TRP SER ASP LEU LEU THR ASP LEU ASP ARG TYR SEQRES 7 A 476 LYS ALA ARG CYS TYR ARG ILE GLU PRO VAL PRO GLY ASN SEQRES 8 A 476 ASP ASN GLN TYR ILE ALA TYR ILE ALA TYR PRO LEU ASP SEQRES 9 A 476 LEU PHE GLU GLU GLY SER ILE VAL ASN LEU MET SER SER SEQRES 10 A 476 ILE VAL GLY ASN VAL PHE GLY PHE LYS ALA VAL ARG ALA SEQRES 11 A 476 LEU ARG LEU GLU ASP MET ARG ILE PRO VAL ALA TYR LEU SEQRES 12 A 476 LYS THR PHE GLN GLY PRO PRO HIS GLY ILE GLN VAL GLU SEQRES 13 A 476 ARG ASP ARG LEU ASN LYS TYR GLY ARG PRO LEU LEU GLY SEQRES 14 A 476 CYS THR ILE LYS PRO LYS LEU GLY LEU SER ALA LYS ASN SEQRES 15 A 476 TYR GLY ARG VAL VAL TYR GLU CYS LEU ARG GLY GLY LEU SEQRES 16 A 476 ASP PHE THR KCX ASP ASP GLU ASN ILE ASN SER GLN PRO SEQRES 17 A 476 PHE MET ARG TRP ARG ASP ARG PHE LEU PHE VAL MET GLU SEQRES 18 A 476 ALA VAL HIS LYS ALA GLU ALA GLU THR GLY GLU ARG LYS SEQRES 19 A 476 GLY HIS TYR LEU ASN VAL THR ALA PRO THR MET GLU GLU SEQRES 20 A 476 MET TYR LYS ARG ALA GLU PHE ALA LYS GLU LEU GLY SER SEQRES 21 A 476 ARG ILE ILE MET VAL ASP PHE LEU THR ALA GLY PHE THR SEQRES 22 A 476 ALA PHE THR SER LEU SER LYS TRP CYS ARG GLU ASN GLY SEQRES 23 A 476 MET LEU LEU HIS LEU HIS ARG ALA MET HIS ALA VAL ILE SEQRES 24 A 476 ASP ARG GLN PRO ASN HIS GLY ILE HIS PHE ARG VAL LEU SEQRES 25 A 476 ALA LYS TRP LEU ARG MET VAL GLY GLY ASP HIS ILE HIS SEQRES 26 A 476 THR GLY THR VAL VAL GLY LYS LEU GLU GLY ASP ARG ALA SEQRES 27 A 476 SER THR LEU GLY PHE VAL ASP LEU LEU ARG GLU ASN TYR SEQRES 28 A 476 ILE PRO ALA ASP PRO SER ARG GLY ILE TYR PHE ASP GLN SEQRES 29 A 476 ASP TRP ALA SER MET PRO GLY VAL PHE PRO VAL ALA SER SEQRES 30 A 476 GLY GLY ILE HIS VAL TRP HIS MET PRO GLU LEU VAL THR SEQRES 31 A 476 ILE PHE GLY ASP ASP ALA VAL LEU GLN PHE GLY GLY GLY SEQRES 32 A 476 THR LEU GLY HIS PRO TRP GLY ASN ALA ALA GLY ALA THR SEQRES 33 A 476 ALA ASN ARG VAL ALA LEU GLU ALA VAL VAL GLN ALA ARG SEQRES 34 A 476 ASN GLU GLY ARG ASP ILE LEU ALA GLU GLY ARG GLU ILE SEQRES 35 A 476 LEU LYS GLU ALA ALA ARG TRP SER PRO GLU LEU ARG ALA SEQRES 36 A 476 ALA MET GLU THR TRP LYS ASP ILE LYS PHE GLU PHE GLU SEQRES 37 A 476 THR VAL ASP THR LEU ASP VAL ALA SEQRES 1 B 105 MET HIS THR GLU THR PHE SER TYR LEU PRO PRO LEU THR SEQRES 2 B 105 ASP GLU GLU ILE LYS LYS GLN VAL GLU TYR ILE LEU LYS SEQRES 3 B 105 ASN GLY TRP ILE PRO GLY ILE GLU TYR THR ASP GLU PRO SEQRES 4 B 105 GLY PRO HIS ASN SER TYR TRP SER PHE TRP LYS LEU PRO SEQRES 5 B 105 PHE PHE ASN ALA GLU THR ALA GLU GLU VAL MET GLU GLU SEQRES 6 B 105 LEU GLU ALA CYS ARG GLU ALA ASN PRO ASP CYS TYR ILE SEQRES 7 B 105 LYS ILE THR GLY TYR ASP ASN ILE ARG GLN GLY GLN VAL SEQRES 8 B 105 LEU SER PHE VAL ALA TYR ARG PRO HIS HIS HIS HIS HIS SEQRES 9 B 105 HIS SEQRES 1 C 476 MET SER THR ASN ASN MET SER LYS ALA ALA TYR GLU ALA SEQRES 2 C 476 GLY VAL LYS GLU TYR ARG GLN THR TYR TYR ASP PRO ASP SEQRES 3 C 476 TYR THR PRO LYS ASP THR ASP ILE LEU ALA ALA PHE ARG SEQRES 4 C 476 ILE THR PRO GLN PRO GLY VAL PRO PRO GLU GLU ALA ALA SEQRES 5 C 476 ALA ALA VAL ALA ALA GLU SER SER THR GLY THR TRP THR SEQRES 6 C 476 THR VAL TRP SER ASP LEU LEU THR ASP LEU ASP ARG TYR SEQRES 7 C 476 LYS ALA ARG CYS TYR ARG ILE GLU PRO VAL PRO GLY ASN SEQRES 8 C 476 ASP ASN GLN TYR ILE ALA TYR ILE ALA TYR PRO LEU ASP SEQRES 9 C 476 LEU PHE GLU GLU GLY SER ILE VAL ASN LEU MET SER SER SEQRES 10 C 476 ILE VAL GLY ASN VAL PHE GLY PHE LYS ALA VAL ARG ALA SEQRES 11 C 476 LEU ARG LEU GLU ASP MET ARG ILE PRO VAL ALA TYR LEU SEQRES 12 C 476 LYS THR PHE GLN GLY PRO PRO HIS GLY ILE GLN VAL GLU SEQRES 13 C 476 ARG ASP ARG LEU ASN LYS TYR GLY ARG PRO LEU LEU GLY SEQRES 14 C 476 CYS THR ILE LYS PRO LYS LEU GLY LEU SER ALA LYS ASN SEQRES 15 C 476 TYR GLY ARG VAL VAL TYR GLU CYS LEU ARG GLY GLY LEU SEQRES 16 C 476 ASP PHE THR KCX ASP ASP GLU ASN ILE ASN SER GLN PRO SEQRES 17 C 476 PHE MET ARG TRP ARG ASP ARG PHE LEU PHE VAL MET GLU SEQRES 18 C 476 ALA VAL HIS LYS ALA GLU ALA GLU THR GLY GLU ARG LYS SEQRES 19 C 476 GLY HIS TYR LEU ASN VAL THR ALA PRO THR MET GLU GLU SEQRES 20 C 476 MET TYR LYS ARG ALA GLU PHE ALA LYS GLU LEU GLY SER SEQRES 21 C 476 ARG ILE ILE MET VAL ASP PHE LEU THR ALA GLY PHE THR SEQRES 22 C 476 ALA PHE THR SER LEU SER LYS TRP CYS ARG GLU ASN GLY SEQRES 23 C 476 MET LEU LEU HIS LEU HIS ARG ALA MET HIS ALA VAL ILE SEQRES 24 C 476 ASP ARG GLN PRO ASN HIS GLY ILE HIS PHE ARG VAL LEU SEQRES 25 C 476 ALA LYS TRP LEU ARG MET VAL GLY GLY ASP HIS ILE HIS SEQRES 26 C 476 THR GLY THR VAL VAL GLY LYS LEU GLU GLY ASP ARG ALA SEQRES 27 C 476 SER THR LEU GLY PHE VAL ASP LEU LEU ARG GLU ASN TYR SEQRES 28 C 476 ILE PRO ALA ASP PRO SER ARG GLY ILE TYR PHE ASP GLN SEQRES 29 C 476 ASP TRP ALA SER MET PRO GLY VAL PHE PRO VAL ALA SER SEQRES 30 C 476 GLY GLY ILE HIS VAL TRP HIS MET PRO GLU LEU VAL THR SEQRES 31 C 476 ILE PHE GLY ASP ASP ALA VAL LEU GLN PHE GLY GLY GLY SEQRES 32 C 476 THR LEU GLY HIS PRO TRP GLY ASN ALA ALA GLY ALA THR SEQRES 33 C 476 ALA ASN ARG VAL ALA LEU GLU ALA VAL VAL GLN ALA ARG SEQRES 34 C 476 ASN GLU GLY ARG ASP ILE LEU ALA GLU GLY ARG GLU ILE SEQRES 35 C 476 LEU LYS GLU ALA ALA ARG TRP SER PRO GLU LEU ARG ALA SEQRES 36 C 476 ALA MET GLU THR TRP LYS ASP ILE LYS PHE GLU PHE GLU SEQRES 37 C 476 THR VAL ASP THR LEU ASP VAL ALA SEQRES 1 D 105 MET HIS THR GLU THR PHE SER TYR LEU PRO PRO LEU THR SEQRES 2 D 105 ASP GLU GLU ILE LYS LYS GLN VAL GLU TYR ILE LEU LYS SEQRES 3 D 105 ASN GLY TRP ILE PRO GLY ILE GLU TYR THR ASP GLU PRO SEQRES 4 D 105 GLY PRO HIS ASN SER TYR TRP SER PHE TRP LYS LEU PRO SEQRES 5 D 105 PHE PHE ASN ALA GLU THR ALA GLU GLU VAL MET GLU GLU SEQRES 6 D 105 LEU GLU ALA CYS ARG GLU ALA ASN PRO ASP CYS TYR ILE SEQRES 7 D 105 LYS ILE THR GLY TYR ASP ASN ILE ARG GLN GLY GLN VAL SEQRES 8 D 105 LEU SER PHE VAL ALA TYR ARG PRO HIS HIS HIS HIS HIS SEQRES 9 D 105 HIS SEQRES 1 E 476 MET SER THR ASN ASN MET SER LYS ALA ALA TYR GLU ALA SEQRES 2 E 476 GLY VAL LYS GLU TYR ARG GLN THR TYR TYR ASP PRO ASP SEQRES 3 E 476 TYR THR PRO LYS ASP THR ASP ILE LEU ALA ALA PHE ARG SEQRES 4 E 476 ILE THR PRO GLN PRO GLY VAL PRO PRO GLU GLU ALA ALA SEQRES 5 E 476 ALA ALA VAL ALA ALA GLU SER SER THR GLY THR TRP THR SEQRES 6 E 476 THR VAL TRP SER ASP LEU LEU THR ASP LEU ASP ARG TYR SEQRES 7 E 476 LYS ALA ARG CYS TYR ARG ILE GLU PRO VAL PRO GLY ASN SEQRES 8 E 476 ASP ASN GLN TYR ILE ALA TYR ILE ALA TYR PRO LEU ASP SEQRES 9 E 476 LEU PHE GLU GLU GLY SER ILE VAL ASN LEU MET SER SER SEQRES 10 E 476 ILE VAL GLY ASN VAL PHE GLY PHE LYS ALA VAL ARG ALA SEQRES 11 E 476 LEU ARG LEU GLU ASP MET ARG ILE PRO VAL ALA TYR LEU SEQRES 12 E 476 LYS THR PHE GLN GLY PRO PRO HIS GLY ILE GLN VAL GLU SEQRES 13 E 476 ARG ASP ARG LEU ASN LYS TYR GLY ARG PRO LEU LEU GLY SEQRES 14 E 476 CYS THR ILE LYS PRO LYS LEU GLY LEU SER ALA LYS ASN SEQRES 15 E 476 TYR GLY ARG VAL VAL TYR GLU CYS LEU ARG GLY GLY LEU SEQRES 16 E 476 ASP PHE THR KCX ASP ASP GLU ASN ILE ASN SER GLN PRO SEQRES 17 E 476 PHE MET ARG TRP ARG ASP ARG PHE LEU PHE VAL MET GLU SEQRES 18 E 476 ALA VAL HIS LYS ALA GLU ALA GLU THR GLY GLU ARG LYS SEQRES 19 E 476 GLY HIS TYR LEU ASN VAL THR ALA PRO THR MET GLU GLU SEQRES 20 E 476 MET TYR LYS ARG ALA GLU PHE ALA LYS GLU LEU GLY SER SEQRES 21 E 476 ARG ILE ILE MET VAL ASP PHE LEU THR ALA GLY PHE THR SEQRES 22 E 476 ALA PHE THR SER LEU SER LYS TRP CYS ARG GLU ASN GLY SEQRES 23 E 476 MET LEU LEU HIS LEU HIS ARG ALA MET HIS ALA VAL ILE SEQRES 24 E 476 ASP ARG GLN PRO ASN HIS GLY ILE HIS PHE ARG VAL LEU SEQRES 25 E 476 ALA LYS TRP LEU ARG MET VAL GLY GLY ASP HIS ILE HIS SEQRES 26 E 476 THR GLY THR VAL VAL GLY LYS LEU GLU GLY ASP ARG ALA SEQRES 27 E 476 SER THR LEU GLY PHE VAL ASP LEU LEU ARG GLU ASN TYR SEQRES 28 E 476 ILE PRO ALA ASP PRO SER ARG GLY ILE TYR PHE ASP GLN SEQRES 29 E 476 ASP TRP ALA SER MET PRO GLY VAL PHE PRO VAL ALA SER SEQRES 30 E 476 GLY GLY ILE HIS VAL TRP HIS MET PRO GLU LEU VAL THR SEQRES 31 E 476 ILE PHE GLY ASP ASP ALA VAL LEU GLN PHE GLY GLY GLY SEQRES 32 E 476 THR LEU GLY HIS PRO TRP GLY ASN ALA ALA GLY ALA THR SEQRES 33 E 476 ALA ASN ARG VAL ALA LEU GLU ALA VAL VAL GLN ALA ARG SEQRES 34 E 476 ASN GLU GLY ARG ASP ILE LEU ALA GLU GLY ARG GLU ILE SEQRES 35 E 476 LEU LYS GLU ALA ALA ARG TRP SER PRO GLU LEU ARG ALA SEQRES 36 E 476 ALA MET GLU THR TRP LYS ASP ILE LYS PHE GLU PHE GLU SEQRES 37 E 476 THR VAL ASP THR LEU ASP VAL ALA SEQRES 1 F 105 MET HIS THR GLU THR PHE SER TYR LEU PRO PRO LEU THR SEQRES 2 F 105 ASP GLU GLU ILE LYS LYS GLN VAL GLU TYR ILE LEU LYS SEQRES 3 F 105 ASN GLY TRP ILE PRO GLY ILE GLU TYR THR ASP GLU PRO SEQRES 4 F 105 GLY PRO HIS ASN SER TYR TRP SER PHE TRP LYS LEU PRO SEQRES 5 F 105 PHE PHE ASN ALA GLU THR ALA GLU GLU VAL MET GLU GLU SEQRES 6 F 105 LEU GLU ALA CYS ARG GLU ALA ASN PRO ASP CYS TYR ILE SEQRES 7 F 105 LYS ILE THR GLY TYR ASP ASN ILE ARG GLN GLY GLN VAL SEQRES 8 F 105 LEU SER PHE VAL ALA TYR ARG PRO HIS HIS HIS HIS HIS SEQRES 9 F 105 HIS SEQRES 1 G 476 MET SER THR ASN ASN MET SER LYS ALA ALA TYR GLU ALA SEQRES 2 G 476 GLY VAL LYS GLU TYR ARG GLN THR TYR TYR ASP PRO ASP SEQRES 3 G 476 TYR THR PRO LYS ASP THR ASP ILE LEU ALA ALA PHE ARG SEQRES 4 G 476 ILE THR PRO GLN PRO GLY VAL PRO PRO GLU GLU ALA ALA SEQRES 5 G 476 ALA ALA VAL ALA ALA GLU SER SER THR GLY THR TRP THR SEQRES 6 G 476 THR VAL TRP SER ASP LEU LEU THR ASP LEU ASP ARG TYR SEQRES 7 G 476 LYS ALA ARG CYS TYR ARG ILE GLU PRO VAL PRO GLY ASN SEQRES 8 G 476 ASP ASN GLN TYR ILE ALA TYR ILE ALA TYR PRO LEU ASP SEQRES 9 G 476 LEU PHE GLU GLU GLY SER ILE VAL ASN LEU MET SER SER SEQRES 10 G 476 ILE VAL GLY ASN VAL PHE GLY PHE LYS ALA VAL ARG ALA SEQRES 11 G 476 LEU ARG LEU GLU ASP MET ARG ILE PRO VAL ALA TYR LEU SEQRES 12 G 476 LYS THR PHE GLN GLY PRO PRO HIS GLY ILE GLN VAL GLU SEQRES 13 G 476 ARG ASP ARG LEU ASN LYS TYR GLY ARG PRO LEU LEU GLY SEQRES 14 G 476 CYS THR ILE LYS PRO LYS LEU GLY LEU SER ALA LYS ASN SEQRES 15 G 476 TYR GLY ARG VAL VAL TYR GLU CYS LEU ARG GLY GLY LEU SEQRES 16 G 476 ASP PHE THR KCX ASP ASP GLU ASN ILE ASN SER GLN PRO SEQRES 17 G 476 PHE MET ARG TRP ARG ASP ARG PHE LEU PHE VAL MET GLU SEQRES 18 G 476 ALA VAL HIS LYS ALA GLU ALA GLU THR GLY GLU ARG LYS SEQRES 19 G 476 GLY HIS TYR LEU ASN VAL THR ALA PRO THR MET GLU GLU SEQRES 20 G 476 MET TYR LYS ARG ALA GLU PHE ALA LYS GLU LEU GLY SER SEQRES 21 G 476 ARG ILE ILE MET VAL ASP PHE LEU THR ALA GLY PHE THR SEQRES 22 G 476 ALA PHE THR SER LEU SER LYS TRP CYS ARG GLU ASN GLY SEQRES 23 G 476 MET LEU LEU HIS LEU HIS ARG ALA MET HIS ALA VAL ILE SEQRES 24 G 476 ASP ARG GLN PRO ASN HIS GLY ILE HIS PHE ARG VAL LEU SEQRES 25 G 476 ALA LYS TRP LEU ARG MET VAL GLY GLY ASP HIS ILE HIS SEQRES 26 G 476 THR GLY THR VAL VAL GLY LYS LEU GLU GLY ASP ARG ALA SEQRES 27 G 476 SER THR LEU GLY PHE VAL ASP LEU LEU ARG GLU ASN TYR SEQRES 28 G 476 ILE PRO ALA ASP PRO SER ARG GLY ILE TYR PHE ASP GLN SEQRES 29 G 476 ASP TRP ALA SER MET PRO GLY VAL PHE PRO VAL ALA SER SEQRES 30 G 476 GLY GLY ILE HIS VAL TRP HIS MET PRO GLU LEU VAL THR SEQRES 31 G 476 ILE PHE GLY ASP ASP ALA VAL LEU GLN PHE GLY GLY GLY SEQRES 32 G 476 THR LEU GLY HIS PRO TRP GLY ASN ALA ALA GLY ALA THR SEQRES 33 G 476 ALA ASN ARG VAL ALA LEU GLU ALA VAL VAL GLN ALA ARG SEQRES 34 G 476 ASN GLU GLY ARG ASP ILE LEU ALA GLU GLY ARG GLU ILE SEQRES 35 G 476 LEU LYS GLU ALA ALA ARG TRP SER PRO GLU LEU ARG ALA SEQRES 36 G 476 ALA MET GLU THR TRP LYS ASP ILE LYS PHE GLU PHE GLU SEQRES 37 G 476 THR VAL ASP THR LEU ASP VAL ALA SEQRES 1 H 105 MET HIS THR GLU THR PHE SER TYR LEU PRO PRO LEU THR SEQRES 2 H 105 ASP GLU GLU ILE LYS LYS GLN VAL GLU TYR ILE LEU LYS SEQRES 3 H 105 ASN GLY TRP ILE PRO GLY ILE GLU TYR THR ASP GLU PRO SEQRES 4 H 105 GLY PRO HIS ASN SER TYR TRP SER PHE TRP LYS LEU PRO SEQRES 5 H 105 PHE PHE ASN ALA GLU THR ALA GLU GLU VAL MET GLU GLU SEQRES 6 H 105 LEU GLU ALA CYS ARG GLU ALA ASN PRO ASP CYS TYR ILE SEQRES 7 H 105 LYS ILE THR GLY TYR ASP ASN ILE ARG GLN GLY GLN VAL SEQRES 8 H 105 LEU SER PHE VAL ALA TYR ARG PRO HIS HIS HIS HIS HIS SEQRES 9 H 105 HIS HET KCX A 199 12 HET KCX C 199 12 HET KCX E 199 12 HET KCX G 199 12 HET CAP A 501 21 HET MG A 502 1 HET CAP C 501 21 HET MG C 502 1 HET CAP E 501 21 HET MG E 502 1 HET CAP G 501 21 HET MG G 502 1 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM CAP 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 1 KCX 4(C7 H14 N2 O4) FORMUL 9 CAP 4(C6 H14 O13 P2) FORMUL 10 MG 4(MG 2+) FORMUL 17 HOH *2076(H2 O) HELIX 1 AA1 TYR A 18 TYR A 23 1 6 HELIX 2 AA2 PRO A 47 SER A 59 1 13 HELIX 3 AA3 VAL A 67 THR A 73 5 7 HELIX 4 AA4 ASP A 74 LYS A 79 1 6 HELIX 5 AA5 PRO A 102 PHE A 106 5 5 HELIX 6 AA6 SER A 110 VAL A 119 1 10 HELIX 7 AA7 ASN A 121 PHE A 125 5 5 HELIX 8 AA8 PRO A 139 LYS A 144 1 6 HELIX 9 AA9 GLY A 152 ASN A 161 1 10 HELIX 10 AB1 SER A 179 GLY A 193 1 15 HELIX 11 AB2 ARG A 211 GLY A 231 1 21 HELIX 12 AB3 THR A 244 LEU A 258 1 15 HELIX 13 AB4 PHE A 267 GLY A 271 1 5 HELIX 14 AB5 GLY A 271 GLY A 286 1 16 HELIX 15 AB6 MET A 295 ARG A 301 1 7 HELIX 16 AB7 HIS A 308 GLY A 320 1 13 HELIX 17 AB8 ASP A 336 GLU A 349 1 14 HELIX 18 AB9 ASP A 355 GLY A 359 5 5 HELIX 19 AC1 HIS A 381 TRP A 383 5 3 HELIX 20 AC2 HIS A 384 GLY A 393 1 10 HELIX 21 AC3 GLY A 401 GLY A 406 1 6 HELIX 22 AC4 GLY A 410 GLU A 431 1 22 HELIX 23 AC5 ASP A 434 ARG A 448 1 15 HELIX 24 AC6 SER A 450 LYS A 461 1 12 HELIX 25 AC7 THR B 13 ASN B 27 1 15 HELIX 26 AC8 THR B 58 ASN B 73 1 16 HELIX 27 AC9 TYR C 18 TYR C 23 1 6 HELIX 28 AD1 PRO C 47 SER C 59 1 13 HELIX 29 AD2 VAL C 67 THR C 73 5 7 HELIX 30 AD3 ASP C 74 LYS C 79 1 6 HELIX 31 AD4 PRO C 102 PHE C 106 5 5 HELIX 32 AD5 SER C 110 VAL C 119 1 10 HELIX 33 AD6 ASN C 121 PHE C 125 5 5 HELIX 34 AD7 PRO C 139 LYS C 144 1 6 HELIX 35 AD8 GLY C 152 ASN C 161 1 10 HELIX 36 AD9 SER C 179 GLY C 193 1 15 HELIX 37 AE1 ARG C 211 GLY C 231 1 21 HELIX 38 AE2 THR C 244 LEU C 258 1 15 HELIX 39 AE3 PHE C 267 GLY C 271 1 5 HELIX 40 AE4 GLY C 271 GLY C 286 1 16 HELIX 41 AE5 MET C 295 ARG C 301 1 7 HELIX 42 AE6 HIS C 308 GLY C 320 1 13 HELIX 43 AE7 ASP C 336 GLU C 349 1 14 HELIX 44 AE8 ASP C 355 GLY C 359 5 5 HELIX 45 AE9 HIS C 381 TRP C 383 5 3 HELIX 46 AF1 HIS C 384 GLY C 393 1 10 HELIX 47 AF2 GLY C 401 GLY C 406 1 6 HELIX 48 AF3 GLY C 410 GLU C 431 1 22 HELIX 49 AF4 GLU C 438 SER C 450 1 13 HELIX 50 AF5 SER C 450 LYS C 461 1 12 HELIX 51 AF6 THR D 13 ASN D 27 1 15 HELIX 52 AF7 THR D 58 ASN D 73 1 16 HELIX 53 AF8 TYR E 18 TYR E 23 1 6 HELIX 54 AF9 PRO E 47 SER E 59 1 13 HELIX 55 AG1 VAL E 67 THR E 73 5 7 HELIX 56 AG2 ASP E 74 LYS E 79 1 6 HELIX 57 AG3 PRO E 102 PHE E 106 5 5 HELIX 58 AG4 SER E 110 VAL E 119 1 10 HELIX 59 AG5 ASN E 121 PHE E 125 5 5 HELIX 60 AG6 PRO E 139 LYS E 144 1 6 HELIX 61 AG7 GLY E 152 ASN E 161 1 10 HELIX 62 AG8 SER E 179 GLY E 193 1 15 HELIX 63 AG9 ARG E 211 GLY E 231 1 21 HELIX 64 AH1 THR E 244 LEU E 258 1 15 HELIX 65 AH2 PHE E 267 GLY E 271 1 5 HELIX 66 AH3 GLY E 271 GLY E 286 1 16 HELIX 67 AH4 MET E 295 ARG E 301 1 7 HELIX 68 AH5 HIS E 308 GLY E 320 1 13 HELIX 69 AH6 ASP E 336 GLU E 349 1 14 HELIX 70 AH7 ASP E 355 GLY E 359 5 5 HELIX 71 AH8 HIS E 381 TRP E 383 5 3 HELIX 72 AH9 HIS E 384 GLY E 393 1 10 HELIX 73 AI1 GLY E 401 GLY E 406 1 6 HELIX 74 AI2 GLY E 410 GLU E 431 1 22 HELIX 75 AI3 ASP E 434 SER E 450 1 17 HELIX 76 AI4 SER E 450 LYS E 461 1 12 HELIX 77 AI5 THR F 13 ASN F 27 1 15 HELIX 78 AI6 THR F 58 ASN F 73 1 16 HELIX 79 AI7 TYR G 18 TYR G 23 1 6 HELIX 80 AI8 PRO G 47 SER G 59 1 13 HELIX 81 AI9 VAL G 67 THR G 73 5 7 HELIX 82 AJ1 ASP G 74 LYS G 79 1 6 HELIX 83 AJ2 PRO G 102 PHE G 106 5 5 HELIX 84 AJ3 SER G 110 VAL G 119 1 10 HELIX 85 AJ4 ASN G 121 PHE G 125 5 5 HELIX 86 AJ5 PRO G 139 LYS G 144 1 6 HELIX 87 AJ6 GLY G 152 ASN G 161 1 10 HELIX 88 AJ7 SER G 179 GLY G 193 1 15 HELIX 89 AJ8 ARG G 211 GLY G 231 1 21 HELIX 90 AJ9 THR G 244 LEU G 258 1 15 HELIX 91 AK1 PHE G 267 GLY G 271 1 5 HELIX 92 AK2 GLY G 271 GLY G 286 1 16 HELIX 93 AK3 MET G 295 ARG G 301 1 7 HELIX 94 AK4 HIS G 308 GLY G 320 1 13 HELIX 95 AK5 ASP G 336 GLU G 349 1 14 HELIX 96 AK6 ASP G 355 GLY G 359 5 5 HELIX 97 AK7 HIS G 381 TRP G 383 5 3 HELIX 98 AK8 HIS G 384 GLY G 393 1 10 HELIX 99 AK9 GLY G 401 GLY G 406 1 6 HELIX 100 AL1 GLY G 410 GLU G 431 1 22 HELIX 101 AL2 ASP G 434 SER G 450 1 17 HELIX 102 AL3 SER G 450 LYS G 461 1 12 HELIX 103 AL4 THR H 13 ASN H 27 1 15 HELIX 104 AL5 THR H 58 ASN H 73 1 16 SHEET 1 AA1 5 ARG A 81 VAL A 88 0 SHEET 2 AA1 5 ASN A 91 TYR A 101 -1 O TYR A 98 N ARG A 84 SHEET 3 AA1 5 ILE A 34 PRO A 42 -1 N ILE A 34 O TYR A 101 SHEET 4 AA1 5 VAL A 128 ARG A 137 -1 O ARG A 132 N ARG A 39 SHEET 5 AA1 5 GLY A 306 ILE A 307 1 O GLY A 306 N LEU A 133 SHEET 1 AA2 8 LEU A 167 GLY A 169 0 SHEET 2 AA2 8 VAL A 397 GLN A 399 1 O LEU A 398 N LEU A 167 SHEET 3 AA2 8 PHE A 373 SER A 377 1 N ALA A 376 O GLN A 399 SHEET 4 AA2 8 HIS A 323 HIS A 325 1 N ILE A 324 O PHE A 373 SHEET 5 AA2 8 LEU A 288 HIS A 292 1 N LEU A 291 O HIS A 323 SHEET 6 AA2 8 ILE A 262 ASP A 266 1 N ILE A 263 O HIS A 290 SHEET 7 AA2 8 GLY A 235 ASN A 239 1 N LEU A 238 O MET A 264 SHEET 8 AA2 8 PHE A 197 KCX A 199 1 N THR A 198 O TYR A 237 SHEET 1 AA3 2 TYR A 351 ILE A 352 0 SHEET 2 AA3 2 GLN A 364 ASP A 365 -1 O GLN A 364 N ILE A 352 SHEET 1 AA4 4 SER B 47 PHE B 48 0 SHEET 2 AA4 4 ILE B 30 THR B 36 -1 N TYR B 35 O SER B 47 SHEET 3 AA4 4 TYR B 77 ASP B 84 -1 O LYS B 79 N GLU B 34 SHEET 4 AA4 4 GLY B 89 TYR B 97 -1 O ALA B 96 N ILE B 78 SHEET 1 AA5 5 ARG C 81 VAL C 88 0 SHEET 2 AA5 5 ASN C 91 TYR C 101 -1 O TYR C 98 N ARG C 84 SHEET 3 AA5 5 ILE C 34 PRO C 42 -1 N ILE C 34 O TYR C 101 SHEET 4 AA5 5 VAL C 128 ARG C 137 -1 O ARG C 132 N ARG C 39 SHEET 5 AA5 5 GLY C 306 ILE C 307 1 O GLY C 306 N LEU C 131 SHEET 1 AA6 8 LEU C 167 GLY C 169 0 SHEET 2 AA6 8 VAL C 397 GLN C 399 1 O LEU C 398 N LEU C 167 SHEET 3 AA6 8 PHE C 373 SER C 377 1 N ALA C 376 O GLN C 399 SHEET 4 AA6 8 HIS C 323 HIS C 325 1 N ILE C 324 O PHE C 373 SHEET 5 AA6 8 LEU C 288 HIS C 292 1 N LEU C 291 O HIS C 323 SHEET 6 AA6 8 ILE C 262 ASP C 266 1 N ILE C 263 O HIS C 290 SHEET 7 AA6 8 GLY C 235 ASN C 239 1 N LEU C 238 O MET C 264 SHEET 8 AA6 8 PHE C 197 KCX C 199 1 N THR C 198 O TYR C 237 SHEET 1 AA7 2 TYR C 351 ILE C 352 0 SHEET 2 AA7 2 GLN C 364 ASP C 365 -1 O GLN C 364 N ILE C 352 SHEET 1 AA8 4 SER D 47 PHE D 48 0 SHEET 2 AA8 4 ILE D 30 THR D 36 -1 N TYR D 35 O SER D 47 SHEET 3 AA8 4 TYR D 77 ASP D 84 -1 O LYS D 79 N GLU D 34 SHEET 4 AA8 4 GLY D 89 TYR D 97 -1 O ALA D 96 N ILE D 78 SHEET 1 AA9 5 ARG E 81 VAL E 88 0 SHEET 2 AA9 5 ASN E 91 TYR E 101 -1 O TYR E 98 N ARG E 84 SHEET 3 AA9 5 ILE E 34 PRO E 42 -1 N ILE E 34 O TYR E 101 SHEET 4 AA9 5 VAL E 128 ARG E 137 -1 O ARG E 132 N ARG E 39 SHEET 5 AA9 5 GLY E 306 ILE E 307 1 O GLY E 306 N LEU E 133 SHEET 1 AB1 8 LEU E 167 GLY E 169 0 SHEET 2 AB1 8 VAL E 397 GLN E 399 1 O LEU E 398 N LEU E 167 SHEET 3 AB1 8 PHE E 373 SER E 377 1 N ALA E 376 O VAL E 397 SHEET 4 AB1 8 HIS E 323 HIS E 325 1 N ILE E 324 O PHE E 373 SHEET 5 AB1 8 LEU E 288 HIS E 292 1 N LEU E 291 O HIS E 323 SHEET 6 AB1 8 ILE E 262 ASP E 266 1 N ILE E 263 O HIS E 290 SHEET 7 AB1 8 GLY E 235 ASN E 239 1 N LEU E 238 O MET E 264 SHEET 8 AB1 8 PHE E 197 KCX E 199 1 N THR E 198 O TYR E 237 SHEET 1 AB2 2 TYR E 351 ILE E 352 0 SHEET 2 AB2 2 GLN E 364 ASP E 365 -1 O GLN E 364 N ILE E 352 SHEET 1 AB3 4 SER F 47 PHE F 48 0 SHEET 2 AB3 4 ILE F 30 THR F 36 -1 N TYR F 35 O SER F 47 SHEET 3 AB3 4 TYR F 77 ASP F 84 -1 O LYS F 79 N GLU F 34 SHEET 4 AB3 4 GLY F 89 TYR F 97 -1 O ALA F 96 N ILE F 78 SHEET 1 AB4 5 ARG G 81 VAL G 88 0 SHEET 2 AB4 5 ASN G 91 TYR G 101 -1 O TYR G 98 N ARG G 84 SHEET 3 AB4 5 ILE G 34 PRO G 42 -1 N ILE G 34 O TYR G 101 SHEET 4 AB4 5 VAL G 128 ARG G 137 -1 O ARG G 132 N ARG G 39 SHEET 5 AB4 5 GLY G 306 ILE G 307 1 O GLY G 306 N LEU G 133 SHEET 1 AB5 8 LEU G 167 GLY G 169 0 SHEET 2 AB5 8 VAL G 397 GLN G 399 1 O LEU G 398 N LEU G 167 SHEET 3 AB5 8 PHE G 373 SER G 377 1 N ALA G 376 O GLN G 399 SHEET 4 AB5 8 HIS G 323 HIS G 325 1 N ILE G 324 O PHE G 373 SHEET 5 AB5 8 LEU G 288 HIS G 292 1 N LEU G 291 O HIS G 323 SHEET 6 AB5 8 ILE G 262 ASP G 266 1 N ILE G 263 O HIS G 290 SHEET 7 AB5 8 GLY G 235 ASN G 239 1 N LEU G 238 O MET G 264 SHEET 8 AB5 8 PHE G 197 KCX G 199 1 N THR G 198 O TYR G 237 SHEET 1 AB6 2 TYR G 351 ILE G 352 0 SHEET 2 AB6 2 GLN G 364 ASP G 365 -1 O GLN G 364 N ILE G 352 SHEET 1 AB7 4 SER H 47 PHE H 48 0 SHEET 2 AB7 4 ILE H 30 THR H 36 -1 N TYR H 35 O SER H 47 SHEET 3 AB7 4 TYR H 77 ASP H 84 -1 O TYR H 83 N ILE H 30 SHEET 4 AB7 4 GLY H 89 TYR H 97 -1 O ALA H 96 N ILE H 78 LINK C THR A 198 N KCX A 199 1555 1555 1.33 LINK C KCX A 199 N ASP A 200 1555 1555 1.33 LINK C THR C 198 N KCX C 199 1555 1555 1.33 LINK C KCX C 199 N ASP C 200 1555 1555 1.33 LINK C THR E 198 N KCX E 199 1555 1555 1.33 LINK C KCX E 199 N ASP E 200 1555 1555 1.33 LINK C THR G 198 N KCX G 199 1555 1555 1.33 LINK C KCX G 199 N ASP G 200 1555 1555 1.33 LINK OQ2 KCX A 199 MG MG A 502 1555 1555 2.01 LINK OD1 ASP A 201 MG MG A 502 1555 1555 2.02 LINK OE1 GLU A 202 MG MG A 502 1555 1555 2.04 LINK O2 CAP A 501 MG MG A 502 1555 1555 2.24 LINK O3 CAP A 501 MG MG A 502 1555 1555 2.17 LINK O7 CAP A 501 MG MG A 502 1555 1555 2.07 LINK OQ1 KCX C 199 MG MG C 502 1555 1555 2.00 LINK OD1 ASP C 201 MG MG C 502 1555 1555 1.98 LINK OE1 GLU C 202 MG MG C 502 1555 1555 2.01 LINK O2 CAP C 501 MG MG C 502 1555 1555 2.27 LINK O3 CAP C 501 MG MG C 502 1555 1555 2.18 LINK O6 CAP C 501 MG MG C 502 1555 1555 2.08 LINK OQ2 KCX E 199 MG MG E 502 1555 1555 2.01 LINK OD1 ASP E 201 MG MG E 502 1555 1555 1.99 LINK OE1 GLU E 202 MG MG E 502 1555 1555 2.01 LINK O2 CAP E 501 MG MG E 502 1555 1555 2.24 LINK O3 CAP E 501 MG MG E 502 1555 1555 2.20 LINK O7 CAP E 501 MG MG E 502 1555 1555 2.10 LINK OQ1 KCX G 199 MG MG G 502 1555 1555 2.05 LINK OD1 ASP G 201 MG MG G 502 1555 1555 2.02 LINK OE1 GLU G 202 MG MG G 502 1555 1555 1.99 LINK O2 CAP G 501 MG MG G 502 1555 1555 2.24 LINK O3 CAP G 501 MG MG G 502 1555 1555 2.17 LINK O6 CAP G 501 MG MG G 502 1555 1555 2.09 CISPEP 1 LYS A 173 PRO A 174 0 -2.85 CISPEP 2 LYS C 173 PRO C 174 0 -0.75 CISPEP 3 LYS E 173 PRO E 174 0 -1.22 CISPEP 4 LYS G 173 PRO G 174 0 -4.58 CRYST1 131.873 131.873 305.463 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007583 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007583 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003274 0.00000