HEADER TRANSCRIPTION/TRANSCRIPTION INHIBITOR 10-AUG-21 7RRZ TITLE CRYSTAL STRUCTURE OF THE ER-ALPHA LIGAND-BINDING DOMAIN (L372S, L536S) TITLE 2 IN COMPLEX WITH DMERI-30 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 6 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ER-ALPHA, LIGAND COMPLEX, DMERI, TRANSCRIPTION, TRANSCRIPTION- KEYWDS 2 TRANSCRIPTION INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.MIN,J.C.NWACHUKWU,C.K.MIN,J.W.NJERI,S.SRINIVASAN,E.S.RANGARAJAN, AUTHOR 2 C.C.NETTLES,S.YAN,R.HOUTMAN,P.R.GRIFFIN,T.IZARD, AUTHOR 3 B.S.KATZENELLENBOGEN,J.A.KATZENELLENBOGEN,K.W.NETTLES REVDAT 2 18-OCT-23 7RRZ 1 REMARK REVDAT 1 08-SEP-21 7RRZ 0 JRNL AUTH J.MIN,J.C.NWACHUKWU,C.K.MIN,J.W.NJERI,S.SRINIVASAN, JRNL AUTH 2 E.S.RANGARAJAN,C.C.NETTLES,V.SANABRIA GUILLEN,Y.ZIEGLER, JRNL AUTH 3 S.YAN,K.E.CARLSON,Y.HOU,S.H.KIM,S.NOVICK,B.D.PASCAL, JRNL AUTH 4 R.HOUTMAN,P.R.GRIFFIN,T.IZARD,B.S.KATZENELLENBOGEN, JRNL AUTH 5 J.A.KATZENELLENBOGEN,K.W.NETTLES JRNL TITL DUAL-MECHANISM ESTROGEN RECEPTOR INHIBITORS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 34452998 JRNL DOI 10.1073/PNAS.2101657118 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 63.4 REMARK 3 NUMBER OF REFLECTIONS : 54360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2672 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.8600 - 4.8900 0.96 4158 184 0.2428 0.2345 REMARK 3 2 4.8900 - 3.8800 0.96 4102 232 0.1966 0.2348 REMARK 3 3 3.8800 - 3.3900 0.92 3940 208 0.2153 0.2318 REMARK 3 4 3.3900 - 3.0800 0.99 4207 261 0.2401 0.2552 REMARK 3 5 3.0800 - 2.8600 0.99 4284 206 0.2519 0.2925 REMARK 3 6 2.8600 - 2.6900 0.98 4161 237 0.2597 0.2375 REMARK 3 7 2.6900 - 2.5600 0.98 4222 193 0.2679 0.2921 REMARK 3 8 2.5600 - 2.4500 0.98 4204 210 0.2711 0.2717 REMARK 3 9 2.4500 - 2.3500 0.96 4100 232 0.2830 0.2908 REMARK 3 10 2.3500 - 2.2700 0.87 3768 190 0.2842 0.2868 REMARK 3 11 2.2700 - 2.2000 0.28 1218 59 0.3038 0.2591 REMARK 3 12 2.2000 - 2.1400 0.67 2871 139 0.2919 0.3094 REMARK 3 13 2.1400 - 2.0800 0.57 2459 120 0.3100 0.3301 REMARK 3 14 2.0800 - 2.0300 0.26 1105 53 0.3256 0.3015 REMARK 3 15 2.0300 - 1.9800 0.32 1399 52 0.3169 0.3443 REMARK 3 16 1.9800 - 1.9400 0.20 836 61 0.3372 0.2987 REMARK 3 17 1.9400 - 1.9000 0.06 252 9 0.3716 0.3935 REMARK 3 18 1.9000 - 1.8700 0.07 318 14 0.3492 0.3589 REMARK 3 19 1.8700 - 1.8300 0.02 84 12 0.3268 0.2561 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RRZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000258494. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 - 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROCESS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54405 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 90.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.5 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2QXS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG 3350, 200 MM MGCL2, 0.1 M REMARK 280 BIS-TRIS/HEPES/TRIS-HCL, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 ASN A 304 REMARK 465 SER A 305 REMARK 465 GLY A 420 REMARK 465 MET A 528 REMARK 465 LYS A 529 REMARK 465 CYS A 530 REMARK 465 LYS A 531 REMARK 465 ASN A 532 REMARK 465 VAL A 533 REMARK 465 HIS A 547 REMARK 465 ARG A 548 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 PHE B 337 REMARK 465 SER B 338 REMARK 465 GLU B 339 REMARK 465 ALA B 340 REMARK 465 LYS B 416 REMARK 465 CYS B 417 REMARK 465 VAL B 418 REMARK 465 GLU B 419 REMARK 465 GLY B 420 REMARK 465 LYS B 529 REMARK 465 CYS B 530 REMARK 465 LYS B 531 REMARK 465 ASN B 532 REMARK 465 HIS B 547 REMARK 465 ARG B 548 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 ILE C 298 REMARK 465 LYS C 299 REMARK 465 ARG C 300 REMARK 465 SER C 301 REMARK 465 LYS C 302 REMARK 465 LYS C 303 REMARK 465 ASN C 304 REMARK 465 SER C 305 REMARK 465 CYS C 417 REMARK 465 VAL C 418 REMARK 465 GLU C 419 REMARK 465 GLY C 420 REMARK 465 MET C 421 REMARK 465 TYR C 526 REMARK 465 SER C 527 REMARK 465 MET C 528 REMARK 465 LYS C 529 REMARK 465 CYS C 530 REMARK 465 LYS C 531 REMARK 465 ASN C 532 REMARK 465 HIS C 547 REMARK 465 ARG C 548 REMARK 465 LEU C 549 REMARK 465 HIS C 550 REMARK 465 ALA C 551 REMARK 465 PRO C 552 REMARK 465 THR C 553 REMARK 465 SER C 554 REMARK 465 ILE D 298 REMARK 465 LYS D 299 REMARK 465 ARG D 300 REMARK 465 SER D 301 REMARK 465 LYS D 302 REMARK 465 LYS D 303 REMARK 465 ASN D 304 REMARK 465 PRO D 333 REMARK 465 THR D 334 REMARK 465 ARG D 335 REMARK 465 PRO D 336 REMARK 465 PHE D 337 REMARK 465 SER D 338 REMARK 465 GLU D 339 REMARK 465 ALA D 340 REMARK 465 LYS D 416 REMARK 465 CYS D 417 REMARK 465 VAL D 418 REMARK 465 GLU D 419 REMARK 465 GLY D 420 REMARK 465 LEU D 462 REMARK 465 SER D 463 REMARK 465 SER D 464 REMARK 465 THR D 465 REMARK 465 LEU D 466 REMARK 465 SER D 527 REMARK 465 MET D 528 REMARK 465 LYS D 529 REMARK 465 CYS D 530 REMARK 465 LYS D 531 REMARK 465 ASN D 532 REMARK 465 HIS D 547 REMARK 465 ARG D 548 REMARK 465 LEU D 549 REMARK 465 HIS D 550 REMARK 465 ALA D 551 REMARK 465 PRO D 552 REMARK 465 THR D 553 REMARK 465 SER D 554 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 522 O HOH A 701 1.81 REMARK 500 OE1 GLN A 314 O HOH A 702 1.81 REMARK 500 O HOH A 712 O HOH A 744 1.82 REMARK 500 OE1 GLU B 523 O HOH B 701 1.83 REMARK 500 ND1 HIS B 474 O HOH B 702 1.83 REMARK 500 O HOH D 702 O HOH D 707 1.85 REMARK 500 N LEU A 525 O HOH A 701 1.87 REMARK 500 N LYS D 472 O HOH D 701 1.87 REMARK 500 NE ARG D 477 O HOH D 702 1.87 REMARK 500 CD ARG D 477 O HOH D 707 1.87 REMARK 500 OD2 ASP A 321 O HOH A 703 1.88 REMARK 500 N LEU B 408 O HOH B 703 1.89 REMARK 500 OD2 ASP A 369 O HOH A 704 1.89 REMARK 500 N PHE A 461 O HOH A 705 1.89 REMARK 500 OE2 GLU A 330 O HOH A 706 1.91 REMARK 500 CA ASN B 407 O HOH B 703 1.91 REMARK 500 OE2 GLU A 542 O HOH A 707 1.91 REMARK 500 O GLU D 470 O HOH D 701 1.91 REMARK 500 OD2 ASP B 473 NH1 ARG B 477 1.92 REMARK 500 N ASN B 407 O HOH B 703 1.93 REMARK 500 OD1 ASN B 348 O HOH B 704 1.94 REMARK 500 OE2 GLU B 523 O HOH B 705 1.94 REMARK 500 OE2 GLU D 471 O HOH D 703 1.94 REMARK 500 OD1 ASP C 369 O HOH C 701 1.95 REMARK 500 NH2 ARG B 412 O HOH B 706 1.95 REMARK 500 C GLU D 471 O HOH D 701 1.95 REMARK 500 N ASP D 473 O HOH D 701 1.96 REMARK 500 O HOH B 743 O HOH B 747 1.97 REMARK 500 OD1 ASN A 359 O HOH A 708 1.98 REMARK 500 NH2 ARG A 352 O HOH A 709 1.99 REMARK 500 SD MET A 427 O HOH A 764 1.99 REMARK 500 SD MET D 343 O HOH D 777 2.00 REMARK 500 OE1 GLU B 542 O HOH B 707 2.01 REMARK 500 C ASN B 407 O HOH B 703 2.02 REMARK 500 OE2 GLU C 542 O HOH C 702 2.03 REMARK 500 O PRO B 406 O HOH B 703 2.04 REMARK 500 OD2 ASP C 369 O HOH C 701 2.05 REMARK 500 C PRO B 406 O HOH B 703 2.05 REMARK 500 O HOH C 703 O HOH C 755 2.05 REMARK 500 OD1 ASP A 369 O HOH A 704 2.06 REMARK 500 C GLU D 470 O HOH D 701 2.07 REMARK 500 OD1 ASN D 348 O HOH D 704 2.08 REMARK 500 O HOH C 748 O HOH C 759 2.08 REMARK 500 CZ ARG B 412 O HOH B 706 2.09 REMARK 500 OG SER C 329 O HOH C 703 2.10 REMARK 500 NZ LYS C 449 O HOH C 704 2.10 REMARK 500 O HOH D 754 O HOH D 768 2.11 REMARK 500 NZ LYS A 449 O HOH A 710 2.14 REMARK 500 C GLU A 523 O HOH A 701 2.15 REMARK 500 OD2 ASP D 473 O HOH D 702 2.16 REMARK 500 REMARK 500 THIS ENTRY HAS 52 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 706 O HOH B 716 1645 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 515 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 515 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG C 436 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG C 515 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG C 515 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 416 -3.22 -58.93 REMARK 500 LEU A 462 81.16 -69.82 REMARK 500 TYR B 526 40.58 -72.55 REMARK 500 LEU C 462 84.08 -66.44 REMARK 500 GLN D 414 -8.77 93.67 REMARK 500 ASP D 545 81.03 -59.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR B 526 SER B 527 147.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 77I C 601 DBREF 7RRZ A 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 7RRZ B 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 7RRZ C 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 7RRZ D 298 554 UNP P03372 ESR1_HUMAN 298 554 SEQADV 7RRZ SER A 372 UNP P03372 LEU 372 ENGINEERED MUTATION SEQADV 7RRZ SER A 536 UNP P03372 LEU 536 ENGINEERED MUTATION SEQADV 7RRZ SER B 372 UNP P03372 LEU 372 ENGINEERED MUTATION SEQADV 7RRZ SER B 536 UNP P03372 LEU 536 ENGINEERED MUTATION SEQADV 7RRZ SER C 372 UNP P03372 LEU 372 ENGINEERED MUTATION SEQADV 7RRZ SER C 536 UNP P03372 LEU 536 ENGINEERED MUTATION SEQADV 7RRZ SER D 372 UNP P03372 LEU 372 ENGINEERED MUTATION SEQADV 7RRZ SER D 536 UNP P03372 LEU 536 ENGINEERED MUTATION SEQRES 1 A 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 A 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 A 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 A 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 A 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 A 257 ARG VAL PRO GLY PHE VAL ASP LEU THR SER HIS ASP GLN SEQRES 7 A 257 VAL HIS LEU LEU GLU YCM ALA TRP LEU GLU ILE LEU MET SEQRES 8 A 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 A 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 A 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 A 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 A 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 A 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 A 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 A 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 A 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 A 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 A 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 A 257 ASN VAL VAL PRO SER TYR ASP LEU LEU LEU GLU MET LEU SEQRES 20 A 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 B 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 B 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 B 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 B 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 B 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 B 257 ARG VAL PRO GLY PHE VAL ASP LEU THR SER HIS ASP GLN SEQRES 7 B 257 VAL HIS LEU LEU GLU YCM ALA TRP LEU GLU ILE LEU MET SEQRES 8 B 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 B 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 B 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 B 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 B 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 B 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 B 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 B 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 B 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 B 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 B 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 B 257 ASN VAL VAL PRO SER TYR ASP LEU LEU LEU GLU MET LEU SEQRES 20 B 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 C 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 C 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 C 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 C 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 C 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 C 257 ARG VAL PRO GLY PHE VAL ASP LEU THR SER HIS ASP GLN SEQRES 7 C 257 VAL HIS LEU LEU GLU YCM ALA TRP LEU GLU ILE LEU MET SEQRES 8 C 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 C 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 C 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 C 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 C 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 C 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 C 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 C 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 C 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 C 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 C 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 C 257 ASN VAL VAL PRO SER TYR ASP LEU LEU LEU GLU MET LEU SEQRES 20 C 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 D 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 D 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 D 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 D 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 D 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 D 257 ARG VAL PRO GLY PHE VAL ASP LEU THR SER HIS ASP GLN SEQRES 7 D 257 VAL HIS LEU LEU GLU YCM ALA TRP LEU GLU ILE LEU MET SEQRES 8 D 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 D 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 D 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 D 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 D 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 D 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 D 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 D 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 D 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 D 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 D 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 D 257 ASN VAL VAL PRO SER TYR ASP LEU LEU LEU GLU MET LEU SEQRES 20 D 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER MODRES 7RRZ YCM A 381 CYS MODIFIED RESIDUE MODRES 7RRZ YCM B 381 CYS MODIFIED RESIDUE MODRES 7RRZ YCM C 381 CYS MODIFIED RESIDUE MODRES 7RRZ YCM D 381 CYS MODIFIED RESIDUE HET YCM A 381 10 HET YCM B 381 10 HET YCM C 381 10 HET YCM D 381 10 HET 77I A 601 94 HET 77I B 601 47 HET 77I C 601 44 HET 77I D 601 47 HETNAM YCM S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE HETNAM 77I (1S,2R,4S,5R,6S)-5-(4-HYDROXYPHENYL)-N-(4- HETNAM 2 77I METHOXYPHENYL)-6-{4-[3-(PIPERIDIN-1-YL) HETNAM 3 77I PROPOXY]PHENYL}-N-(2,2,2-TRIFLUOROETHYL)-7- HETNAM 4 77I OXABICYCLO[2.2.1]HEPTANE-2-SULFONAMIDE HETSYN YCM CYSTEINE-S-ACETAMIDE FORMUL 1 YCM 4(C5 H10 N2 O3 S) FORMUL 5 77I 4(C35 H39 F3 N2 O6 S) FORMUL 9 HOH *279(H2 O) HELIX 1 AA1 LEU A 306 LEU A 310 5 5 HELIX 2 AA2 THR A 311 GLU A 323 1 13 HELIX 3 AA3 SER A 338 LYS A 362 1 25 HELIX 4 AA4 GLY A 366 LEU A 370 5 5 HELIX 5 AA5 THR A 371 SER A 395 1 25 HELIX 6 AA6 ASN A 413 GLY A 415 5 3 HELIX 7 AA7 VAL A 422 MET A 438 1 17 HELIX 8 AA8 GLN A 441 SER A 456 1 16 HELIX 9 AA9 GLY A 457 PHE A 461 5 5 HELIX 10 AB1 THR A 465 ALA A 493 1 29 HELIX 11 AB2 THR A 496 LEU A 525 1 30 HELIX 12 AB3 SER A 536 ALA A 546 1 11 HELIX 13 AB4 SER B 305 LEU B 310 5 6 HELIX 14 AB5 THR B 311 GLU B 323 1 13 HELIX 15 AB6 MET B 342 LYS B 362 1 21 HELIX 16 AB7 GLY B 366 LEU B 370 5 5 HELIX 17 AB8 THR B 371 SER B 395 1 25 HELIX 18 AB9 VAL B 422 MET B 438 1 17 HELIX 19 AC1 GLN B 441 SER B 456 1 16 HELIX 20 AC2 GLY B 457 PHE B 461 5 5 HELIX 21 AC3 THR B 465 ALA B 493 1 29 HELIX 22 AC4 THR B 496 TYR B 526 1 31 HELIX 23 AC5 SER B 536 ALA B 546 1 11 HELIX 24 AC6 LEU C 306 LEU C 310 5 5 HELIX 25 AC7 THR C 311 GLU C 323 1 13 HELIX 26 AC8 SER C 338 LYS C 362 1 25 HELIX 27 AC9 GLY C 366 LEU C 370 5 5 HELIX 28 AD1 THR C 371 SER C 395 1 25 HELIX 29 AD2 ASN C 413 GLY C 415 5 3 HELIX 30 AD3 GLU C 423 MET C 438 1 16 HELIX 31 AD4 GLN C 441 SER C 456 1 16 HELIX 32 AD5 GLY C 457 PHE C 461 5 5 HELIX 33 AD6 THR C 465 GLY C 494 1 30 HELIX 34 AD7 THR C 496 LEU C 525 1 30 HELIX 35 AD8 SER C 536 ALA C 546 1 11 HELIX 36 AD9 SER D 305 LEU D 310 5 6 HELIX 37 AE1 THR D 311 GLU D 323 1 13 HELIX 38 AE2 MET D 342 LYS D 362 1 21 HELIX 39 AE3 GLY D 366 LEU D 370 5 5 HELIX 40 AE4 THR D 371 SER D 395 1 25 HELIX 41 AE5 VAL D 422 MET D 438 1 17 HELIX 42 AE6 GLN D 441 SER D 456 1 16 HELIX 43 AE7 GLY D 457 PHE D 461 5 5 HELIX 44 AE8 SER D 468 ALA D 493 1 26 HELIX 45 AE9 THR D 496 TYR D 526 1 31 HELIX 46 AF1 SER D 536 ASP D 545 1 10 SHEET 1 AA1 2 LYS A 401 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SHEET 1 AA3 2 LYS C 401 ALA C 405 0 SHEET 2 AA3 2 LEU C 408 ASP C 411 -1 O LEU C 410 N LEU C 402 SHEET 1 AA4 2 LYS D 401 ALA D 405 0 SHEET 2 AA4 2 LEU D 408 ASP D 411 -1 O LEU D 410 N LEU D 402 LINK C GLU A 380 N YCM A 381 1555 1555 1.33 LINK C YCM A 381 N ALA A 382 1555 1555 1.34 LINK C GLU B 380 N YCM B 381 1555 1555 1.34 LINK C YCM B 381 N ALA B 382 1555 1555 1.33 LINK C GLU C 380 N YCM C 381 1555 1555 1.34 LINK C YCM C 381 N ALA C 382 1555 1555 1.33 LINK C GLU D 380 N YCM D 381 1555 1555 1.34 LINK C YCM D 381 N ALA D 382 1555 1555 1.33 CISPEP 1 ARG A 335 PRO A 336 0 9.26 CISPEP 2 ARG C 335 PRO C 336 0 5.64 CRYST1 53.546 58.915 93.457 87.24 75.18 62.93 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018676 -0.009544 -0.005715 0.00000 SCALE2 0.000000 0.019062 0.001516 0.00000 SCALE3 0.000000 0.000000 0.011103 0.00000