HEADER TRANSFERASE 18-AUG-21 7RUV TITLE STRUCTURE OF HUMAN ATP:COBALAMIN ADENOSYLTRANSFERASE E193K BOUND TO TITLE 2 ADENOSYLCOBALAMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CORRINOID ADENOSYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: COB(II)ALAMIN ADENOSYLTRANSFERASE,COB(II)YRINIC ACID A,C- COMPND 5 DIAMIDE ADENOSYLTRANSFERASE,COBINAMIDE/COBALAMIN ADENOSYLTRANSFERASE, COMPND 6 METHYLMALONIC ACIDURIA TYPE B PROTEIN; COMPND 7 EC: 2.5.1.17; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MMAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ATP:COBALAMIN ADENOSYL TRANSFERASE, COBALAMIN, VITAMIN B12, PATIENT KEYWDS 2 MUTATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.MASCARENHAS,H.GOUDA,M.KOUTMOS,R.BANERJEE REVDAT 3 18-OCT-23 7RUV 1 REMARK REVDAT 2 15-DEC-21 7RUV 1 JRNL REVDAT 1 24-NOV-21 7RUV 0 JRNL AUTH H.GOUDA,R.MASCARENHAS,S.PILLAY,M.RUETZ,M.KOUTMOS,R.BANERJEE JRNL TITL PATIENT MUTATIONS IN HUMAN ATP:COB(I)ALAMIN JRNL TITL 2 ADENOSYLTRANSFERASE DIFFERENTIALLY AFFECT ITS CATALYTIC JRNL TITL 3 VERSUS CHAPERONE FUNCTIONS. JRNL REF J.BIOL.CHEM. V. 297 01373 2021 JRNL REFN ESSN 1083-351X JRNL PMID 34757128 JRNL DOI 10.1016/J.JBC.2021.101373 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 52063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9000 - 5.5951 0.99 2684 155 0.1603 0.1636 REMARK 3 2 5.5951 - 4.4445 1.00 2715 136 0.1662 0.1973 REMARK 3 3 4.4445 - 3.8837 1.00 2708 144 0.1546 0.1711 REMARK 3 4 3.8837 - 3.5290 1.00 2700 166 0.1811 0.2140 REMARK 3 5 3.5290 - 3.2763 0.99 2695 135 0.1855 0.2484 REMARK 3 6 3.2763 - 3.0833 1.00 2700 141 0.1972 0.2638 REMARK 3 7 3.0833 - 2.9290 1.00 2721 141 0.2005 0.2176 REMARK 3 8 2.9290 - 2.8016 1.00 2718 142 0.2026 0.2615 REMARK 3 9 2.8016 - 2.6938 1.00 2684 145 0.2008 0.2518 REMARK 3 10 2.6938 - 2.6008 1.00 2723 162 0.1983 0.2292 REMARK 3 11 2.6008 - 2.5195 1.00 2711 128 0.1958 0.2458 REMARK 3 12 2.5195 - 2.4475 1.00 2677 174 0.1999 0.2519 REMARK 3 13 2.4475 - 2.3831 1.00 2722 121 0.2118 0.2662 REMARK 3 14 2.3831 - 2.3250 0.98 2623 162 0.2217 0.2693 REMARK 3 15 2.3250 - 2.2722 0.95 2626 129 0.2136 0.2575 REMARK 3 16 2.2722 - 2.2238 0.91 2488 113 0.2276 0.2972 REMARK 3 17 2.2238 - 2.1793 0.87 2380 94 0.2522 0.2965 REMARK 3 18 2.1793 - 2.1382 0.81 2181 130 0.2755 0.3120 REMARK 3 19 2.1382 - 2.1000 0.74 1982 107 0.2981 0.3392 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RUV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000259055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52113 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 33.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.01180 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.78000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IDX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM HEPES PH 7.5, 150 MM KCL, 2 MM REMARK 280 MGCL2, 2 MM TCEP AND 5% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 60.59050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.98194 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.59000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 60.59050 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 34.98194 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 56.59000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 60.59050 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 34.98194 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.59000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 69.96388 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 113.18000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 69.96388 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 113.18000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 69.96388 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 113.18000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 60.59050 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -34.98194 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -56.59000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 301 LIES ON A SPECIAL POSITION. REMARK 375 MG MG A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 436 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 55 REMARK 465 PRO A 56 REMARK 465 LYS A 57 REMARK 465 ILE A 58 REMARK 465 TYR A 59 REMARK 465 THR A 60 REMARK 465 LYS A 61 REMARK 465 THR A 62 REMARK 465 GLY A 63 REMARK 465 ASP A 64 REMARK 465 LYS A 65 REMARK 465 GLY A 66 REMARK 465 PHE A 67 REMARK 465 SER A 68 REMARK 465 SER A 69 REMARK 465 THR A 70 REMARK 465 PHE A 71 REMARK 465 THR A 72 REMARK 465 GLY A 73 REMARK 465 GLU A 74 REMARK 465 ARG A 75 REMARK 465 ARG A 76 REMARK 465 PRO A 77 REMARK 465 LYS A 78 REMARK 465 PRO A 131 REMARK 465 CYS A 132 REMARK 465 SER A 133 REMARK 465 SER A 134 REMARK 465 ALA A 135 REMARK 465 ARG A 136 REMARK 465 GLU A 137 REMARK 465 ALA A 138 REMARK 465 HIS A 139 REMARK 465 LEU A 140 REMARK 465 SER A 174 REMARK 465 LYS A 240 REMARK 465 ASN A 241 REMARK 465 ASP A 242 REMARK 465 PRO A 243 REMARK 465 SER A 244 REMARK 465 ALA A 245 REMARK 465 GLU A 246 REMARK 465 SER A 247 REMARK 465 GLU A 248 REMARK 465 GLY A 249 REMARK 465 LEU A 250 REMARK 465 MET B 55 REMARK 465 PRO B 56 REMARK 465 LYS B 57 REMARK 465 ILE B 58 REMARK 465 TYR B 59 REMARK 465 THR B 60 REMARK 465 LYS B 61 REMARK 465 THR B 62 REMARK 465 GLY B 63 REMARK 465 ASP B 64 REMARK 465 LYS B 65 REMARK 465 GLY B 66 REMARK 465 PHE B 67 REMARK 465 SER B 68 REMARK 465 SER B 69 REMARK 465 THR B 70 REMARK 465 PHE B 71 REMARK 465 THR B 72 REMARK 465 GLY B 73 REMARK 465 GLU B 74 REMARK 465 ARG B 75 REMARK 465 ARG B 76 REMARK 465 PRO B 77 REMARK 465 LYS B 78 REMARK 465 GLU B 105 REMARK 465 LYS B 106 REMARK 465 PRO B 131 REMARK 465 CYS B 132 REMARK 465 SER B 133 REMARK 465 SER B 134 REMARK 465 ALA B 135 REMARK 465 ARG B 136 REMARK 465 GLU B 137 REMARK 465 ALA B 138 REMARK 465 HIS B 139 REMARK 465 LEU B 140 REMARK 465 LYS B 141 REMARK 465 SER B 174 REMARK 465 LYS B 240 REMARK 465 ASN B 241 REMARK 465 ASP B 242 REMARK 465 PRO B 243 REMARK 465 SER B 244 REMARK 465 ALA B 245 REMARK 465 GLU B 246 REMARK 465 SER B 247 REMARK 465 GLU B 248 REMARK 465 GLY B 249 REMARK 465 LEU B 250 REMARK 465 MET C 55 REMARK 465 PRO C 56 REMARK 465 LYS C 57 REMARK 465 ILE C 58 REMARK 465 TYR C 59 REMARK 465 THR C 60 REMARK 465 LYS C 61 REMARK 465 THR C 62 REMARK 465 GLY C 63 REMARK 465 ASP C 64 REMARK 465 LYS C 65 REMARK 465 GLY C 66 REMARK 465 PHE C 67 REMARK 465 SER C 68 REMARK 465 SER C 69 REMARK 465 THR C 70 REMARK 465 PHE C 71 REMARK 465 THR C 72 REMARK 465 GLY C 73 REMARK 465 GLU C 74 REMARK 465 ARG C 75 REMARK 465 ARG C 76 REMARK 465 PRO C 77 REMARK 465 LYS C 78 REMARK 465 PRO C 131 REMARK 465 CYS C 132 REMARK 465 SER C 133 REMARK 465 SER C 134 REMARK 465 ALA C 135 REMARK 465 ARG C 136 REMARK 465 GLU C 137 REMARK 465 ALA C 138 REMARK 465 HIS C 139 REMARK 465 LEU C 140 REMARK 465 LYS C 240 REMARK 465 ASN C 241 REMARK 465 ASP C 242 REMARK 465 PRO C 243 REMARK 465 SER C 244 REMARK 465 ALA C 245 REMARK 465 GLU C 246 REMARK 465 SER C 247 REMARK 465 GLU C 248 REMARK 465 GLY C 249 REMARK 465 LEU C 250 REMARK 465 MET D 55 REMARK 465 PRO D 56 REMARK 465 LYS D 57 REMARK 465 ILE D 58 REMARK 465 TYR D 59 REMARK 465 THR D 60 REMARK 465 LYS D 61 REMARK 465 THR D 62 REMARK 465 GLY D 63 REMARK 465 ASP D 64 REMARK 465 LYS D 65 REMARK 465 GLY D 66 REMARK 465 PHE D 67 REMARK 465 SER D 68 REMARK 465 SER D 69 REMARK 465 THR D 70 REMARK 465 PHE D 71 REMARK 465 THR D 72 REMARK 465 GLY D 73 REMARK 465 GLU D 74 REMARK 465 ARG D 75 REMARK 465 ARG D 76 REMARK 465 PRO D 77 REMARK 465 LYS D 78 REMARK 465 PRO D 131 REMARK 465 CYS D 132 REMARK 465 SER D 133 REMARK 465 SER D 134 REMARK 465 ALA D 135 REMARK 465 ARG D 136 REMARK 465 GLU D 137 REMARK 465 ALA D 138 REMARK 465 HIS D 139 REMARK 465 LEU D 140 REMARK 465 LYS D 240 REMARK 465 ASN D 241 REMARK 465 ASP D 242 REMARK 465 PRO D 243 REMARK 465 SER D 244 REMARK 465 ALA D 245 REMARK 465 GLU D 246 REMARK 465 SER D 247 REMARK 465 GLU D 248 REMARK 465 GLY D 249 REMARK 465 LEU D 250 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 MET A 202 CG SD CE REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 THR B 104 OG1 CG2 REMARK 470 GLU B 204 CG CD OE1 OE2 REMARK 470 GLN B 234 CG CD OE1 NE2 REMARK 470 GLU C 105 CG CD OE1 OE2 REMARK 470 LYS C 106 CG CD CE NZ REMARK 470 LYS C 116 CG CD CE NZ REMARK 470 LYS C 141 CG CD CE NZ REMARK 470 LYS C 146 CG CD CE NZ REMARK 470 GLU D 112 CG CD OE1 OE2 REMARK 470 LYS D 116 CG CD CE NZ REMARK 470 LYS D 146 CG CD CE NZ REMARK 470 MET D 202 CG SD CE REMARK 470 MET D 239 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 202 0.82 -69.80 REMARK 500 HIS B 108 -16.63 -145.55 REMARK 500 PRO C 173 93.41 -65.48 REMARK 500 SER C 174 -137.08 -152.88 REMARK 500 ALA D 129 56.51 -106.31 REMARK 500 SER D 174 -141.29 -158.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 301 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 416 O REMARK 620 2 HOH A 416 O 115.8 REMARK 620 N 1 DBREF 7RUV A 56 250 UNP Q96EY8 MMAB_HUMAN 56 250 DBREF 7RUV B 56 250 UNP Q96EY8 MMAB_HUMAN 56 250 DBREF 7RUV C 56 250 UNP Q96EY8 MMAB_HUMAN 56 250 DBREF 7RUV D 56 250 UNP Q96EY8 MMAB_HUMAN 56 250 SEQADV 7RUV MET A 55 UNP Q96EY8 INITIATING METHIONINE SEQADV 7RUV LYS A 193 UNP Q96EY8 GLU 193 ENGINEERED MUTATION SEQADV 7RUV MET B 55 UNP Q96EY8 INITIATING METHIONINE SEQADV 7RUV LYS B 193 UNP Q96EY8 GLU 193 ENGINEERED MUTATION SEQADV 7RUV MET C 55 UNP Q96EY8 INITIATING METHIONINE SEQADV 7RUV LYS C 193 UNP Q96EY8 GLU 193 ENGINEERED MUTATION SEQADV 7RUV MET D 55 UNP Q96EY8 INITIATING METHIONINE SEQADV 7RUV LYS D 193 UNP Q96EY8 GLU 193 ENGINEERED MUTATION SEQRES 1 A 196 MET PRO LYS ILE TYR THR LYS THR GLY ASP LYS GLY PHE SEQRES 2 A 196 SER SER THR PHE THR GLY GLU ARG ARG PRO LYS ASP ASP SEQRES 3 A 196 GLN VAL PHE GLU ALA VAL GLY THR THR ASP GLU LEU SER SEQRES 4 A 196 SER ALA ILE GLY PHE ALA LEU GLU LEU VAL THR GLU LYS SEQRES 5 A 196 GLY HIS THR PHE ALA GLU GLU LEU GLN LYS ILE GLN CYS SEQRES 6 A 196 THR LEU GLN ASP VAL GLY SER ALA LEU ALA THR PRO CYS SEQRES 7 A 196 SER SER ALA ARG GLU ALA HIS LEU LYS TYR THR THR PHE SEQRES 8 A 196 LYS ALA GLY PRO ILE LEU GLU LEU GLU GLN TRP ILE ASP SEQRES 9 A 196 LYS TYR THR SER GLN LEU PRO PRO LEU THR ALA PHE ILE SEQRES 10 A 196 LEU PRO SER GLY GLY LYS ILE SER SER ALA LEU HIS PHE SEQRES 11 A 196 CYS ARG ALA VAL CYS ARG ARG ALA LYS ARG ARG VAL VAL SEQRES 12 A 196 PRO LEU VAL GLN MET GLY GLU THR ASP ALA ASN VAL ALA SEQRES 13 A 196 LYS PHE LEU ASN ARG LEU SER ASP TYR LEU PHE THR LEU SEQRES 14 A 196 ALA ARG TYR ALA ALA MET LYS GLU GLY ASN GLN GLU LYS SEQRES 15 A 196 ILE TYR MET LYS ASN ASP PRO SER ALA GLU SER GLU GLY SEQRES 16 A 196 LEU SEQRES 1 B 196 MET PRO LYS ILE TYR THR LYS THR GLY ASP LYS GLY PHE SEQRES 2 B 196 SER SER THR PHE THR GLY GLU ARG ARG PRO LYS ASP ASP SEQRES 3 B 196 GLN VAL PHE GLU ALA VAL GLY THR THR ASP GLU LEU SER SEQRES 4 B 196 SER ALA ILE GLY PHE ALA LEU GLU LEU VAL THR GLU LYS SEQRES 5 B 196 GLY HIS THR PHE ALA GLU GLU LEU GLN LYS ILE GLN CYS SEQRES 6 B 196 THR LEU GLN ASP VAL GLY SER ALA LEU ALA THR PRO CYS SEQRES 7 B 196 SER SER ALA ARG GLU ALA HIS LEU LYS TYR THR THR PHE SEQRES 8 B 196 LYS ALA GLY PRO ILE LEU GLU LEU GLU GLN TRP ILE ASP SEQRES 9 B 196 LYS TYR THR SER GLN LEU PRO PRO LEU THR ALA PHE ILE SEQRES 10 B 196 LEU PRO SER GLY GLY LYS ILE SER SER ALA LEU HIS PHE SEQRES 11 B 196 CYS ARG ALA VAL CYS ARG ARG ALA LYS ARG ARG VAL VAL SEQRES 12 B 196 PRO LEU VAL GLN MET GLY GLU THR ASP ALA ASN VAL ALA SEQRES 13 B 196 LYS PHE LEU ASN ARG LEU SER ASP TYR LEU PHE THR LEU SEQRES 14 B 196 ALA ARG TYR ALA ALA MET LYS GLU GLY ASN GLN GLU LYS SEQRES 15 B 196 ILE TYR MET LYS ASN ASP PRO SER ALA GLU SER GLU GLY SEQRES 16 B 196 LEU SEQRES 1 C 196 MET PRO LYS ILE TYR THR LYS THR GLY ASP LYS GLY PHE SEQRES 2 C 196 SER SER THR PHE THR GLY GLU ARG ARG PRO LYS ASP ASP SEQRES 3 C 196 GLN VAL PHE GLU ALA VAL GLY THR THR ASP GLU LEU SER SEQRES 4 C 196 SER ALA ILE GLY PHE ALA LEU GLU LEU VAL THR GLU LYS SEQRES 5 C 196 GLY HIS THR PHE ALA GLU GLU LEU GLN LYS ILE GLN CYS SEQRES 6 C 196 THR LEU GLN ASP VAL GLY SER ALA LEU ALA THR PRO CYS SEQRES 7 C 196 SER SER ALA ARG GLU ALA HIS LEU LYS TYR THR THR PHE SEQRES 8 C 196 LYS ALA GLY PRO ILE LEU GLU LEU GLU GLN TRP ILE ASP SEQRES 9 C 196 LYS TYR THR SER GLN LEU PRO PRO LEU THR ALA PHE ILE SEQRES 10 C 196 LEU PRO SER GLY GLY LYS ILE SER SER ALA LEU HIS PHE SEQRES 11 C 196 CYS ARG ALA VAL CYS ARG ARG ALA LYS ARG ARG VAL VAL SEQRES 12 C 196 PRO LEU VAL GLN MET GLY GLU THR ASP ALA ASN VAL ALA SEQRES 13 C 196 LYS PHE LEU ASN ARG LEU SER ASP TYR LEU PHE THR LEU SEQRES 14 C 196 ALA ARG TYR ALA ALA MET LYS GLU GLY ASN GLN GLU LYS SEQRES 15 C 196 ILE TYR MET LYS ASN ASP PRO SER ALA GLU SER GLU GLY SEQRES 16 C 196 LEU SEQRES 1 D 196 MET PRO LYS ILE TYR THR LYS THR GLY ASP LYS GLY PHE SEQRES 2 D 196 SER SER THR PHE THR GLY GLU ARG ARG PRO LYS ASP ASP SEQRES 3 D 196 GLN VAL PHE GLU ALA VAL GLY THR THR ASP GLU LEU SER SEQRES 4 D 196 SER ALA ILE GLY PHE ALA LEU GLU LEU VAL THR GLU LYS SEQRES 5 D 196 GLY HIS THR PHE ALA GLU GLU LEU GLN LYS ILE GLN CYS SEQRES 6 D 196 THR LEU GLN ASP VAL GLY SER ALA LEU ALA THR PRO CYS SEQRES 7 D 196 SER SER ALA ARG GLU ALA HIS LEU LYS TYR THR THR PHE SEQRES 8 D 196 LYS ALA GLY PRO ILE LEU GLU LEU GLU GLN TRP ILE ASP SEQRES 9 D 196 LYS TYR THR SER GLN LEU PRO PRO LEU THR ALA PHE ILE SEQRES 10 D 196 LEU PRO SER GLY GLY LYS ILE SER SER ALA LEU HIS PHE SEQRES 11 D 196 CYS ARG ALA VAL CYS ARG ARG ALA LYS ARG ARG VAL VAL SEQRES 12 D 196 PRO LEU VAL GLN MET GLY GLU THR ASP ALA ASN VAL ALA SEQRES 13 D 196 LYS PHE LEU ASN ARG LEU SER ASP TYR LEU PHE THR LEU SEQRES 14 D 196 ALA ARG TYR ALA ALA MET LYS GLU GLY ASN GLN GLU LYS SEQRES 15 D 196 ILE TYR MET LYS ASN ASP PRO SER ALA GLU SER GLU GLY SEQRES 16 D 196 LEU HET K A 301 1 HET MG A 302 1 HET B12 A 303 91 HET 5AD A 304 18 HET B12 B 301 91 HET 5AD B 302 18 HET GOL C 501 6 HET MG C 502 1 HET B12 C 503 91 HET 5AD C 504 18 HET B12 D 301 91 HET 5AD D 302 18 HETNAM K POTASSIUM ION HETNAM MG MAGNESIUM ION HETNAM B12 COBALAMIN HETNAM 5AD 5'-DEOXYADENOSINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 K K 1+ FORMUL 6 MG 2(MG 2+) FORMUL 7 B12 4(C62 H89 CO N13 O14 P 2+) FORMUL 8 5AD 4(C10 H13 N5 O3) FORMUL 11 GOL C3 H8 O3 FORMUL 17 HOH *113(H2 O) HELIX 1 AA1 ASP A 79 LYS A 106 1 28 HELIX 2 AA2 PHE A 110 ALA A 129 1 20 HELIX 3 AA3 ALA A 147 SER A 162 1 16 HELIX 4 AA4 GLY A 176 MET A 202 1 27 HELIX 5 AA5 ASP A 206 GLU A 231 1 26 HELIX 6 AA6 ASP B 80 VAL B 103 1 24 HELIX 7 AA7 PHE B 110 ALA B 129 1 20 HELIX 8 AA8 ALA B 147 SER B 162 1 16 HELIX 9 AA9 GLY B 176 MET B 202 1 27 HELIX 10 AB1 ASP B 206 GLY B 232 1 27 HELIX 11 AB2 ASP C 80 LYS C 106 1 27 HELIX 12 AB3 PHE C 110 THR C 130 1 21 HELIX 13 AB4 ALA C 147 SER C 162 1 16 HELIX 14 AB5 GLY C 176 MET C 202 1 27 HELIX 15 AB6 ASP C 206 GLU C 231 1 26 HELIX 16 AB7 ASP D 80 LYS D 106 1 27 HELIX 17 AB8 PHE D 110 ALA D 129 1 20 HELIX 18 AB9 ALA D 147 SER D 162 1 16 HELIX 19 AC1 GLY D 176 MET D 202 1 27 HELIX 20 AC2 ASP D 206 GLU D 231 1 26 LINK K K A 301 O HOH A 416 1555 1555 3.32 LINK K K A 301 O HOH A 416 1555 3555 3.32 CRYST1 121.181 121.181 169.770 90.00 90.00 120.00 H 3 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008252 0.004764 0.000000 0.00000 SCALE2 0.000000 0.009529 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005890 0.00000