HEADER IMMUNE SYSTEM 25-AUG-21 7RYL TITLE T CELL RECEPTOR CO3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: T CELL RECEPTOR GAMMA VARIABLE 4,T CELL RECEPTOR BETA COMPND 3 CONSTANT 1; COMPND 4 CHAIN: C; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: T CELL RECEPTOR DELTA VARIABLE 1,T CELL RECEPTOR ALPHA COMPND 8 CHAIN CONSTANT; COMPND 9 CHAIN: D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRGV4, TCRGV4, TRBC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TRDV1, TRAC, TCRA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CD1, TCR, LIPID ANTIGEN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.WEGRECKI,J.LE NOURS,J.ROSSJOHN REVDAT 4 20-NOV-24 7RYL 1 REMARK REVDAT 3 18-OCT-23 7RYL 1 REMARK REVDAT 2 13-JUL-22 7RYL 1 JRNL REVDAT 1 18-MAY-22 7RYL 0 JRNL AUTH M.WEGRECKI,T.A.OCAMPO,S.D.GUNASINGHE,A.VON BORSTEL,S.Y.TIN, JRNL AUTH 2 J.F.REIJNEVELD,T.P.CAO,B.S.GULLY,J.LE NOURS,D.B.MOODY, JRNL AUTH 3 I.VAN RHIJN,J.ROSSJOHN JRNL TITL ATYPICAL SIDEWAYS RECOGNITION OF CD1A BY AUTOREACTIVE GAMMA JRNL TITL 2 DELTA T CELL RECEPTORS. JRNL REF NAT COMMUN V. 13 3872 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35790773 JRNL DOI 10.1038/S41467-022-31443-9 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30586 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1544 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4700 - 4.4500 1.00 2840 137 0.1810 0.2209 REMARK 3 2 4.4500 - 3.5300 1.00 2691 138 0.1617 0.2019 REMARK 3 3 3.5300 - 3.0800 1.00 2662 143 0.1847 0.2303 REMARK 3 4 3.0800 - 2.8000 1.00 2634 143 0.2007 0.2530 REMARK 3 5 2.8000 - 2.6000 1.00 2624 135 0.2171 0.2786 REMARK 3 6 2.6000 - 2.4500 1.00 2616 144 0.2291 0.2610 REMARK 3 7 2.4500 - 2.3300 1.00 2592 146 0.2294 0.3034 REMARK 3 8 2.3300 - 2.2200 1.00 2625 129 0.2347 0.3606 REMARK 3 9 2.2200 - 2.1400 1.00 2566 151 0.2404 0.3004 REMARK 3 10 2.1400 - 2.0600 1.00 2617 139 0.2616 0.2966 REMARK 3 11 2.0600 - 2.0000 1.00 2575 139 0.2800 0.3088 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.238 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.038 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3539 REMARK 3 ANGLE : 0.629 4817 REMARK 3 CHIRALITY : 0.046 521 REMARK 3 PLANARITY : 0.005 620 REMARK 3 DIHEDRAL : 13.122 1251 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 8 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.4736 32.1416 31.1796 REMARK 3 T TENSOR REMARK 3 T11: 0.2630 T22: 0.2116 REMARK 3 T33: 0.2129 T12: -0.0444 REMARK 3 T13: 0.0675 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.3481 L22: 2.8474 REMARK 3 L33: 3.0701 L12: -2.2872 REMARK 3 L13: 1.1679 L23: -0.7825 REMARK 3 S TENSOR REMARK 3 S11: 0.0899 S12: 0.3158 S13: -0.0365 REMARK 3 S21: -0.4283 S22: -0.1663 S23: -0.1965 REMARK 3 S31: -0.0248 S32: 0.2573 S33: 0.0676 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 128 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1894 56.5737 37.0621 REMARK 3 T TENSOR REMARK 3 T11: 0.1574 T22: 0.1740 REMARK 3 T33: 0.1337 T12: 0.0012 REMARK 3 T13: -0.0239 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 2.7963 L22: 2.2423 REMARK 3 L33: 4.8797 L12: -0.7317 REMARK 3 L13: -1.2397 L23: 1.0339 REMARK 3 S TENSOR REMARK 3 S11: 0.1299 S12: 0.0451 S13: -0.0888 REMARK 3 S21: -0.1984 S22: -0.1232 S23: 0.0391 REMARK 3 S31: 0.0555 S32: -0.0836 S33: -0.0144 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7638 25.8790 50.6079 REMARK 3 T TENSOR REMARK 3 T11: 0.1777 T22: 0.3333 REMARK 3 T33: 0.3123 T12: -0.1033 REMARK 3 T13: 0.0496 T23: 0.0606 REMARK 3 L TENSOR REMARK 3 L11: 6.2306 L22: 6.0663 REMARK 3 L33: 4.3892 L12: -3.8609 REMARK 3 L13: -1.4973 L23: 3.2639 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: 0.0801 S13: -0.6503 REMARK 3 S21: -0.0690 S22: -0.2636 S23: 1.1176 REMARK 3 S31: 0.3125 S32: -0.6820 S33: 0.3578 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 16 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3588 27.0799 52.3644 REMARK 3 T TENSOR REMARK 3 T11: 0.1130 T22: 0.2612 REMARK 3 T33: 0.2400 T12: -0.0043 REMARK 3 T13: 0.0378 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 3.3427 L22: 5.7119 REMARK 3 L33: 3.0893 L12: -0.8133 REMARK 3 L13: 0.7949 L23: 0.6128 REMARK 3 S TENSOR REMARK 3 S11: -0.0428 S12: -0.2450 S13: -0.5069 REMARK 3 S21: 0.0806 S22: 0.1353 S23: -0.1841 REMARK 3 S31: 0.1090 S32: -0.0712 S33: -0.0411 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 54 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.5013 23.8634 60.6346 REMARK 3 T TENSOR REMARK 3 T11: 0.1625 T22: 0.3981 REMARK 3 T33: 0.3450 T12: 0.0057 REMARK 3 T13: 0.0317 T23: 0.1323 REMARK 3 L TENSOR REMARK 3 L11: 1.3911 L22: 7.7643 REMARK 3 L33: 2.1085 L12: -0.8160 REMARK 3 L13: 0.7241 L23: 1.1467 REMARK 3 S TENSOR REMARK 3 S11: 0.0186 S12: -0.5481 S13: -0.4584 REMARK 3 S21: 0.2209 S22: 0.0740 S23: -0.0116 REMARK 3 S31: 0.0764 S32: -0.0963 S33: -0.1057 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 80 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.1456 33.6729 53.0321 REMARK 3 T TENSOR REMARK 3 T11: 0.1661 T22: 0.2466 REMARK 3 T33: 0.1758 T12: 0.0130 REMARK 3 T13: 0.0562 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 2.5159 L22: 6.8764 REMARK 3 L33: 2.2632 L12: -1.8607 REMARK 3 L13: -0.1952 L23: 1.1973 REMARK 3 S TENSOR REMARK 3 S11: -0.2535 S12: -0.0964 S13: -0.1737 REMARK 3 S21: 0.3945 S22: 0.1130 S23: -0.1965 REMARK 3 S31: 0.1082 S32: 0.0581 S33: 0.1604 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 97 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1825 21.1900 44.3285 REMARK 3 T TENSOR REMARK 3 T11: 0.2970 T22: 0.1980 REMARK 3 T33: 0.2480 T12: 0.0168 REMARK 3 T13: 0.0513 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 3.8845 L22: 8.1620 REMARK 3 L33: 4.0009 L12: -5.5005 REMARK 3 L13: -0.0957 L23: 0.2509 REMARK 3 S TENSOR REMARK 3 S11: -0.1446 S12: 0.3167 S13: -0.0722 REMARK 3 S21: 0.0063 S22: -0.0143 S23: -0.2809 REMARK 3 S31: 0.6352 S32: 0.4527 S33: -0.0098 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 109 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.3132 45.1308 57.9532 REMARK 3 T TENSOR REMARK 3 T11: 0.4272 T22: 0.4412 REMARK 3 T33: 0.2622 T12: 0.1546 REMARK 3 T13: 0.1440 T23: 0.0881 REMARK 3 L TENSOR REMARK 3 L11: 6.4121 L22: 5.5015 REMARK 3 L33: 0.4459 L12: -5.3624 REMARK 3 L13: -1.5807 L23: 1.4608 REMARK 3 S TENSOR REMARK 3 S11: -0.0681 S12: -0.5003 S13: 0.1844 REMARK 3 S21: 0.2284 S22: 0.4040 S23: -0.1121 REMARK 3 S31: -0.5508 S32: -0.3625 S33: -0.0976 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 123 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4504 60.2186 42.5427 REMARK 3 T TENSOR REMARK 3 T11: 0.2827 T22: 0.5109 REMARK 3 T33: 0.3657 T12: 0.0061 REMARK 3 T13: 0.0344 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 6.9009 L22: 7.8914 REMARK 3 L33: 3.6963 L12: 5.2958 REMARK 3 L13: -4.6119 L23: -5.0864 REMARK 3 S TENSOR REMARK 3 S11: -0.0473 S12: 1.0605 S13: 0.5796 REMARK 3 S21: -0.3931 S22: 0.7755 S23: 0.7802 REMARK 3 S31: -0.2575 S32: -1.1395 S33: -0.8499 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 142 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8720 45.2422 48.6474 REMARK 3 T TENSOR REMARK 3 T11: 0.5518 T22: 0.5851 REMARK 3 T33: 0.5603 T12: -0.1647 REMARK 3 T13: 0.0399 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 8.4286 L22: 7.9656 REMARK 3 L33: 4.3680 L12: 0.1663 REMARK 3 L13: 5.8262 L23: 1.2330 REMARK 3 S TENSOR REMARK 3 S11: 0.3888 S12: 0.3555 S13: -1.1561 REMARK 3 S21: -0.0204 S22: 0.1000 S23: 1.1817 REMARK 3 S31: 1.2550 S32: -0.9121 S33: -0.6020 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 157 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8974 51.9522 49.7233 REMARK 3 T TENSOR REMARK 3 T11: 0.1604 T22: 0.2878 REMARK 3 T33: 0.1622 T12: -0.0122 REMARK 3 T13: 0.0726 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 7.4742 L22: 3.8748 REMARK 3 L33: 6.1317 L12: 1.3027 REMARK 3 L13: 3.8883 L23: 2.0440 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: -0.0694 S13: -0.3210 REMARK 3 S21: 0.1016 S22: 0.0933 S23: -0.1350 REMARK 3 S31: 0.2820 S32: 0.1276 S33: -0.0230 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 182 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3213 52.5665 41.8312 REMARK 3 T TENSOR REMARK 3 T11: 0.4223 T22: 1.3537 REMARK 3 T33: 0.7604 T12: -0.0315 REMARK 3 T13: -0.0310 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 2.3825 L22: 8.3625 REMARK 3 L33: 3.2879 L12: -4.0837 REMARK 3 L13: -2.1055 L23: 4.6282 REMARK 3 S TENSOR REMARK 3 S11: 0.6563 S12: 0.8452 S13: -0.6725 REMARK 3 S21: -0.6252 S22: 0.3370 S23: 1.7082 REMARK 3 S31: -0.1051 S32: -2.9248 S33: -0.8826 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RYL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000258751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93222 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30668 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4X6B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M AMMONIUM SULFATE, 15% PEG 4000, REMARK 280 0.1 MES PH 6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.49350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.57400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.20700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.57400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.49350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.20700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 SER C 4 REMARK 465 ASN C 5 REMARK 465 LEU C 6 REMARK 465 GLU C 7 REMARK 465 SER C 31 REMARK 465 THR C 32 REMARK 465 MET D 1 REMARK 465 SER D 195 REMARK 465 ILE D 196 REMARK 465 ILE D 197 REMARK 465 PRO D 198 REMARK 465 GLU D 199 REMARK 465 ASP D 200 REMARK 465 THR D 201 REMARK 465 PHE D 202 REMARK 465 PHE D 203 REMARK 465 PRO D 204 REMARK 465 SER D 205 REMARK 465 PRO D 206 REMARK 465 GLU D 207 REMARK 465 SER D 208 REMARK 465 SER D 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR C 55 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER C 75 OG REMARK 470 THR C 76 OG1 CG2 REMARK 470 ARG C 77 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 78 CG CD CE NZ REMARK 470 LYS C 122 CG CD CE NZ REMARK 470 ASN C 188 CG OD1 ND2 REMARK 470 GLU C 226 CG CD OE1 OE2 REMARK 470 THR C 228 OG1 CG2 REMARK 470 ASP C 230 CG OD1 OD2 REMARK 470 GLU D 56 CG CD OE1 OE2 REMARK 470 ARG D 98 NE CZ NH1 NH2 REMARK 470 ARG D 128 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 135 CG CD CE NZ REMARK 470 LYS D 153 CG CD CE NZ REMARK 470 ASP D 156 CG OD1 OD2 REMARK 470 ASP D 171 CG OD1 OD2 REMARK 470 LYS D 183 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER C 140 OE1 GLN D 83 4466 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR C 73 -164.57 -108.08 REMARK 500 THR C 76 81.36 -63.05 REMARK 500 HIS C 158 79.01 -111.77 REMARK 500 ASN C 188 -54.19 68.93 REMARK 500 ASN C 188 -53.89 68.93 REMARK 500 GLU C 226 -73.28 -101.70 REMARK 500 TRP C 227 162.60 65.77 REMARK 500 THR C 228 -115.24 -104.14 REMARK 500 THR C 228 93.97 -164.43 REMARK 500 GLN C 229 -18.49 -165.33 REMARK 500 ARG C 231 175.10 179.71 REMARK 500 ARG D 17 -9.06 69.13 REMARK 500 ALA D 88 -177.47 -175.22 REMARK 500 ASP D 101 -111.83 -131.90 REMARK 500 ASP D 121 59.27 -146.95 REMARK 500 SER D 133 -32.28 70.90 REMARK 500 ASN D 182 64.60 -102.49 REMARK 500 ASP D 185 44.83 -84.51 REMARK 500 REMARK 500 REMARK: NULL DBREF1 7RYL C 3 102 UNP TRGV4_HUMAN DBREF2 7RYL C A0A0C4DH28 19 118 DBREF 7RYL C 120 248 UNP P01850 TRBC1_HUMAN 1 129 DBREF1 7RYL D 2 96 UNP TRDV1_HUMAN DBREF2 7RYL D A0A1B0GX56 21 115 DBREF 7RYL D 117 209 UNP P01848 TRAC_HUMAN 1 93 SEQADV 7RYL MET C 1 UNP A0A0C4DH2 INITIATING METHIONINE SEQADV 7RYL ALA C 2 UNP A0A0C4DH2 EXPRESSION TAG SEQADV 7RYL ASP C 103 UNP A0A0C4DH2 LINKER SEQADV 7RYL TYR C 104 UNP A0A0C4DH2 LINKER SEQADV 7RYL TYR C 105 UNP A0A0C4DH2 LINKER SEQADV 7RYL LYS C 106 UNP A0A0C4DH2 LINKER SEQADV 7RYL LYS C 107 UNP A0A0C4DH2 LINKER SEQADV 7RYL LEU C 108 UNP A0A0C4DH2 LINKER SEQADV 7RYL PHE C 109 UNP A0A0C4DH2 LINKER SEQADV 7RYL GLY C 110 UNP A0A0C4DH2 LINKER SEQADV 7RYL SER C 111 UNP A0A0C4DH2 LINKER SEQADV 7RYL GLY C 112 UNP A0A0C4DH2 LINKER SEQADV 7RYL THR C 113 UNP A0A0C4DH2 LINKER SEQADV 7RYL THR C 114 UNP A0A0C4DH2 LINKER SEQADV 7RYL LEU C 115 UNP A0A0C4DH2 LINKER SEQADV 7RYL VAL C 116 UNP A0A0C4DH2 LINKER SEQADV 7RYL VAL C 117 UNP A0A0C4DH2 LINKER SEQADV 7RYL THR C 118 UNP A0A0C4DH2 LINKER SEQADV 7RYL GLU C 119 UNP A0A0C4DH2 LINKER SEQADV 7RYL LYS C 122 UNP P01850 ASN 3 CONFLICT SEQADV 7RYL ASN C 123 UNP P01850 LYS 4 CONFLICT SEQADV 7RYL TYR C 155 UNP P01850 PHE 36 CONFLICT SEQADV 7RYL CYS C 175 UNP P01850 SER 56 ENGINEERED MUTATION SEQADV 7RYL ALA C 193 UNP P01850 CYS 74 ENGINEERED MUTATION SEQADV 7RYL MET D 1 UNP A0A1B0GX5 INITIATING METHIONINE SEQADV 7RYL LEU D 97 UNP A0A1B0GX5 LINKER SEQADV 7RYL ARG D 98 UNP A0A1B0GX5 LINKER SEQADV 7RYL TRP D 99 UNP A0A1B0GX5 LINKER SEQADV 7RYL PRO D 100 UNP A0A1B0GX5 LINKER SEQADV 7RYL ASP D 101 UNP A0A1B0GX5 LINKER SEQADV 7RYL LYS D 102 UNP A0A1B0GX5 LINKER SEQADV 7RYL LEU D 103 UNP A0A1B0GX5 LINKER SEQADV 7RYL ILE D 104 UNP A0A1B0GX5 LINKER SEQADV 7RYL PHE D 105 UNP A0A1B0GX5 LINKER SEQADV 7RYL GLY D 106 UNP A0A1B0GX5 LINKER SEQADV 7RYL LYS D 107 UNP A0A1B0GX5 LINKER SEQADV 7RYL GLY D 108 UNP A0A1B0GX5 LINKER SEQADV 7RYL THR D 109 UNP A0A1B0GX5 LINKER SEQADV 7RYL ARG D 110 UNP A0A1B0GX5 LINKER SEQADV 7RYL VAL D 111 UNP A0A1B0GX5 LINKER SEQADV 7RYL THR D 112 UNP A0A1B0GX5 LINKER SEQADV 7RYL VAL D 113 UNP A0A1B0GX5 LINKER SEQADV 7RYL GLU D 114 UNP A0A1B0GX5 LINKER SEQADV 7RYL PRO D 115 UNP A0A1B0GX5 LINKER SEQADV 7RYL ASN D 116 UNP A0A1B0GX5 LINKER SEQADV 7RYL CYS D 163 UNP P01848 THR 47 ENGINEERED MUTATION SEQRES 1 C 248 MET ALA SER SER ASN LEU GLU GLY ARG THR LYS SER VAL SEQRES 2 C 248 ILE ARG GLN THR GLY SER SER ALA GLU ILE THR CYS ASP SEQRES 3 C 248 LEU ALA GLU GLY SER THR GLY TYR ILE HIS TRP TYR LEU SEQRES 4 C 248 HIS GLN GLU GLY LYS ALA PRO GLN ARG LEU LEU TYR TYR SEQRES 5 C 248 ASP SER TYR THR SER SER VAL VAL LEU GLU SER GLY ILE SEQRES 6 C 248 SER PRO GLY LYS TYR ASP THR TYR GLY SER THR ARG LYS SEQRES 7 C 248 ASN LEU ARG MET ILE LEU ARG ASN LEU ILE GLU ASN ASP SEQRES 8 C 248 SER GLY VAL TYR TYR CYS ALA THR TRP ASP GLY ASP TYR SEQRES 9 C 248 TYR LYS LYS LEU PHE GLY SER GLY THR THR LEU VAL VAL SEQRES 10 C 248 THR GLU ASP LEU LYS ASN VAL PHE PRO PRO GLU VAL ALA SEQRES 11 C 248 VAL PHE GLU PRO SER GLU ALA GLU ILE SER HIS THR GLN SEQRES 12 C 248 LYS ALA THR LEU VAL CYS LEU ALA THR GLY PHE TYR PRO SEQRES 13 C 248 ASP HIS VAL GLU LEU SER TRP TRP VAL ASN GLY LYS GLU SEQRES 14 C 248 VAL HIS SER GLY VAL CYS THR ASP PRO GLN PRO LEU LYS SEQRES 15 C 248 GLU GLN PRO ALA LEU ASN ASP SER ARG TYR ALA LEU SER SEQRES 16 C 248 SER ARG LEU ARG VAL SER ALA THR PHE TRP GLN ASN PRO SEQRES 17 C 248 ARG ASN HIS PHE ARG CYS GLN VAL GLN PHE TYR GLY LEU SEQRES 18 C 248 SER GLU ASN ASP GLU TRP THR GLN ASP ARG ALA LYS PRO SEQRES 19 C 248 VAL THR GLN ILE VAL SER ALA GLU ALA TRP GLY ARG ALA SEQRES 20 C 248 ASP SEQRES 1 D 209 MET ALA GLN LYS VAL THR GLN ALA GLN SER SER VAL SER SEQRES 2 D 209 MET PRO VAL ARG LYS ALA VAL THR LEU ASN CYS LEU TYR SEQRES 3 D 209 GLU THR SER TRP TRP SER TYR TYR ILE PHE TRP TYR LYS SEQRES 4 D 209 GLN LEU PRO SER LYS GLU MET ILE PHE LEU ILE ARG GLN SEQRES 5 D 209 GLY SER ASP GLU GLN ASN ALA LYS SER GLY ARG TYR SER SEQRES 6 D 209 VAL ASN PHE LYS LYS ALA ALA LYS SER VAL ALA LEU THR SEQRES 7 D 209 ILE SER ALA LEU GLN LEU GLU ASP SER ALA LYS TYR PHE SEQRES 8 D 209 CYS ALA LEU GLY GLU LEU ARG TRP PRO ASP LYS LEU ILE SEQRES 9 D 209 PHE GLY LYS GLY THR ARG VAL THR VAL GLU PRO ASN ILE SEQRES 10 D 209 GLN ASN PRO ASP PRO ALA VAL TYR GLN LEU ARG ASP SER SEQRES 11 D 209 LYS SER SER ASP LYS SER VAL CYS LEU PHE THR ASP PHE SEQRES 12 D 209 ASP SER GLN THR ASN VAL SER GLN SER LYS ASP SER ASP SEQRES 13 D 209 VAL TYR ILE THR ASP LYS CYS VAL LEU ASP MET ARG SER SEQRES 14 D 209 MET ASP PHE LYS SER ASN SER ALA VAL ALA TRP SER ASN SEQRES 15 D 209 LYS SER ASP PHE ALA CYS ALA ASN ALA PHE ASN ASN SER SEQRES 16 D 209 ILE ILE PRO GLU ASP THR PHE PHE PRO SER PRO GLU SER SEQRES 17 D 209 SER HET EDO C 301 4 HET SO4 D 301 5 HET SO4 D 302 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO C2 H6 O2 FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *291(H2 O) HELIX 1 AA1 ILE C 88 SER C 92 5 5 HELIX 2 AA2 ASP C 120 VAL C 124 5 5 HELIX 3 AA3 SER C 135 GLN C 143 1 9 HELIX 4 AA4 ALA C 202 GLN C 206 1 5 HELIX 5 AA5 GLN D 83 SER D 87 5 5 HELIX 6 AA6 ALA D 187 PHE D 192 1 6 SHEET 1 AA1 6 SER C 12 GLN C 16 0 SHEET 2 AA1 6 THR C 113 THR C 118 1 O THR C 118 N ARG C 15 SHEET 3 AA1 6 GLY C 93 TRP C 100 -1 N TYR C 95 O THR C 113 SHEET 4 AA1 6 ILE C 35 HIS C 40 -1 N TYR C 38 O TYR C 96 SHEET 5 AA1 6 GLN C 47 ASP C 53 -1 O LEU C 49 N TRP C 37 SHEET 6 AA1 6 SER C 58 LEU C 61 -1 O VAL C 60 N TYR C 51 SHEET 1 AA2 4 SER C 12 GLN C 16 0 SHEET 2 AA2 4 THR C 113 THR C 118 1 O THR C 118 N ARG C 15 SHEET 3 AA2 4 GLY C 93 TRP C 100 -1 N TYR C 95 O THR C 113 SHEET 4 AA2 4 LYS C 107 PHE C 109 -1 O LEU C 108 N THR C 99 SHEET 1 AA3 3 ALA C 21 ILE C 23 0 SHEET 2 AA3 3 MET C 82 LEU C 84 -1 O MET C 82 N ILE C 23 SHEET 3 AA3 3 TYR C 70 ASP C 71 -1 N ASP C 71 O ILE C 83 SHEET 1 AA4 4 GLU C 128 PHE C 132 0 SHEET 2 AA4 4 LYS C 144 PHE C 154 -1 O VAL C 148 N PHE C 132 SHEET 3 AA4 4 TYR C 192 SER C 201 -1 O LEU C 194 N ALA C 151 SHEET 4 AA4 4 VAL C 174 THR C 176 -1 N CYS C 175 O ARG C 197 SHEET 1 AA5 4 GLU C 128 PHE C 132 0 SHEET 2 AA5 4 LYS C 144 PHE C 154 -1 O VAL C 148 N PHE C 132 SHEET 3 AA5 4 TYR C 192 SER C 201 -1 O LEU C 194 N ALA C 151 SHEET 4 AA5 4 LEU C 181 LYS C 182 -1 N LEU C 181 O ALA C 193 SHEET 1 AA6 4 LYS C 168 GLU C 169 0 SHEET 2 AA6 4 VAL C 159 VAL C 165 -1 N VAL C 165 O LYS C 168 SHEET 3 AA6 4 HIS C 211 PHE C 218 -1 O GLN C 215 N SER C 162 SHEET 4 AA6 4 GLN C 237 TRP C 244 -1 O GLN C 237 N PHE C 218 SHEET 1 AA7 2 LYS D 4 THR D 6 0 SHEET 2 AA7 2 LEU D 25 GLU D 27 -1 O LEU D 25 N THR D 6 SHEET 1 AA8 5 SER D 11 PRO D 15 0 SHEET 2 AA8 5 THR D 109 GLU D 114 1 O ARG D 110 N VAL D 12 SHEET 3 AA8 5 ALA D 88 GLU D 96 -1 N ALA D 88 O VAL D 111 SHEET 4 AA8 5 TYR D 33 LEU D 41 -1 N GLN D 40 O LYS D 89 SHEET 5 AA8 5 GLU D 45 GLY D 53 -1 O GLN D 52 N ILE D 35 SHEET 1 AA9 4 SER D 11 PRO D 15 0 SHEET 2 AA9 4 THR D 109 GLU D 114 1 O ARG D 110 N VAL D 12 SHEET 3 AA9 4 ALA D 88 GLU D 96 -1 N ALA D 88 O VAL D 111 SHEET 4 AA9 4 ILE D 104 PHE D 105 -1 O ILE D 104 N LEU D 94 SHEET 1 AB1 4 VAL D 20 LEU D 22 0 SHEET 2 AB1 4 SER D 74 ILE D 79 -1 O LEU D 77 N LEU D 22 SHEET 3 AB1 4 TYR D 64 LYS D 69 -1 N SER D 65 O THR D 78 SHEET 4 AB1 4 LYS D 60 SER D 61 -1 N SER D 61 O TYR D 64 SHEET 1 AB2 4 ALA D 123 ARG D 128 0 SHEET 2 AB2 4 SER D 136 THR D 141 -1 O LEU D 139 N TYR D 125 SHEET 3 AB2 4 PHE D 172 SER D 181 -1 O ALA D 179 N CYS D 138 SHEET 4 AB2 4 VAL D 157 ILE D 159 -1 N TYR D 158 O TRP D 180 SHEET 1 AB3 4 ALA D 123 ARG D 128 0 SHEET 2 AB3 4 SER D 136 THR D 141 -1 O LEU D 139 N TYR D 125 SHEET 3 AB3 4 PHE D 172 SER D 181 -1 O ALA D 179 N CYS D 138 SHEET 4 AB3 4 CYS D 163 MET D 167 -1 N MET D 167 O PHE D 172 SSBOND 1 CYS C 25 CYS C 97 1555 1555 2.04 SSBOND 2 CYS C 149 CYS C 214 1555 1555 2.01 SSBOND 3 CYS C 175 CYS D 163 1555 1555 2.05 SSBOND 4 CYS D 24 CYS D 92 1555 1555 2.03 SSBOND 5 CYS D 138 CYS D 188 1555 1555 2.03 CISPEP 1 TYR C 155 PRO C 156 0 1.27 CRYST1 50.987 76.414 113.148 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019613 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008838 0.00000