HEADER IMMUNE SYSTEM 17-SEP-21 7S8I TITLE PHOSPHOPEPTIDE-SPECIFIC LC13 TCR, MONOCLINIC CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAV27_LC13 TCR ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TRBV27_LC13 TCR BETA CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET30A; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS HLA, MLL PEPTIDE, HLA-B*07:02, HLA-B7, IMMUNITY, IMMUNE SYSTEM, KEYWDS 2 PHOSPHOPEPTIDE, CANCER, NEOANTIGEN, TCR EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,S.NYOVANIE,L.PATSKOVSKA,A.NATARAJAN,B.JOSHI,B.MORIN, AUTHOR 2 C.BRITTSAN,O.HUBER,S.GORDON,X.MICHELET,F.SCHMITZBERGER,R.STEIN, AUTHOR 3 M.FINDEIS,A.HURWITZ,M.VAN DIJK,J.BUELL,D.UNDERWOOD,M.KROGSGAARD REVDAT 4 06-NOV-24 7S8I 1 REMARK REVDAT 3 18-OCT-23 7S8I 1 REMARK REVDAT 2 20-SEP-23 7S8I 1 JRNL REVDAT 1 02-NOV-22 7S8I 0 JRNL AUTH Y.PATSKOVSKY,A.NATARAJAN,L.PATSKOVSKA,S.NYOVANIE,B.JOSHI, JRNL AUTH 2 B.MORIN,C.BRITTSAN,O.HUBER,S.GORDON,X.MICHELET, JRNL AUTH 3 F.SCHMITZBERGER,R.B.STEIN,M.A.FINDEIS,A.HURWITZ,M.VAN DIJK, JRNL AUTH 4 E.CHANTZOURA,A.S.YAGUE,D.POLLACK SMITH,J.S.BUELL, JRNL AUTH 5 D.UNDERWOOD,M.KROGSGAARD JRNL TITL MOLECULAR MECHANISM OF PHOSPHOPEPTIDE NEOANTIGEN JRNL TITL 2 IMMUNOGENICITY. JRNL REF NAT COMMUN V. 14 3763 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37353482 JRNL DOI 10.1038/S41467-023-39425-1 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 44804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1421 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3233 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3497 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 462 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 0.76000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.422 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3710 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3381 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5069 ; 1.421 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7825 ; 0.756 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 475 ; 6.969 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;36.084 ;24.520 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 611 ;15.072 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;13.269 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 550 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4306 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 881 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 6.1118 15.1049 25.5239 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.0636 REMARK 3 T33: 0.0513 T12: 0.0550 REMARK 3 T13: -0.0530 T23: -0.0406 REMARK 3 L TENSOR REMARK 3 L11: 1.0895 L22: 0.6171 REMARK 3 L33: 3.5094 L12: 0.2049 REMARK 3 L13: -1.1018 L23: -1.3620 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: -0.1607 S13: -0.0207 REMARK 3 S21: -0.0451 S22: -0.0608 S23: -0.0093 REMARK 3 S31: 0.0204 S32: 0.1742 S33: 0.0841 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 241 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3911 9.6536 16.5730 REMARK 3 T TENSOR REMARK 3 T11: 0.0260 T22: 0.0147 REMARK 3 T33: 0.0291 T12: 0.0043 REMARK 3 T13: -0.0147 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 0.9623 L22: 0.1522 REMARK 3 L33: 2.0402 L12: -0.0503 REMARK 3 L13: -0.7141 L23: -0.3526 REMARK 3 S TENSOR REMARK 3 S11: -0.0556 S12: 0.0149 S13: -0.0001 REMARK 3 S21: -0.0469 S22: 0.0078 S23: 0.0251 REMARK 3 S31: 0.1487 S32: -0.1025 S33: 0.0478 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7S8I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : SI 111 CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46274 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 33.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.65000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OGA REMARK 200 REMARK 200 REMARK: PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-28%PEG1000, 0.1M HEPES-NAOH, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.61400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 PRO A 202 REMARK 465 GLU A 203 REMARK 465 SER A 204 REMARK 465 SER A 205 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 149 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 159 CA - CB - SG ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG B 96 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 58 -125.49 62.94 REMARK 500 SER A 128 93.73 -164.74 REMARK 500 ASP B 150 43.07 -81.50 REMARK 500 HIS B 151 77.81 -101.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 7S8I A 0 205 PDB 7S8I 7S8I 0 205 DBREF 7S8I B 0 241 PDB 7S8I 7S8I 0 241 SEQRES 1 A 206 MET GLN LEU LEU GLU GLN SER PRO GLN PHE LEU SER ILE SEQRES 2 A 206 GLN GLU GLY GLU ASN LEU THR VAL TYR CYS ASN SER SER SEQRES 3 A 206 SER VAL PHE SER SER LEU GLN TRP TYR ARG GLN GLU PRO SEQRES 4 A 206 GLY GLU GLY PRO VAL LEU LEU VAL THR VAL VAL THR GLY SEQRES 5 A 206 GLY GLU VAL LYS LYS LEU LYS ARG LEU THR PHE GLN PHE SEQRES 6 A 206 GLY ASP ALA ARG LYS ASP SER SER LEU HIS ILE THR ALA SEQRES 7 A 206 ALA GLN PRO GLY ASP THR GLY LEU TYR LEU CYS ALA GLY SEQRES 8 A 206 TYR GLY GLY GLY SER ASN TYR LYS LEU THR PHE GLY LYS SEQRES 9 A 206 GLY THR LEU LEU THR VAL ASN PRO TYR ILE GLN ASN PRO SEQRES 10 A 206 ASP PRO ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER SEQRES 11 A 206 ASP LYS SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN SEQRES 12 A 206 THR ASN VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE SEQRES 13 A 206 THR ASP LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE SEQRES 14 A 206 LYS SER ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP SEQRES 15 A 206 PHE ALA CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO SEQRES 16 A 206 GLU ASP THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 B 242 MET GLN VAL THR GLN ASN PRO ARG TYR LEU ILE THR VAL SEQRES 2 B 242 THR GLY LYS LYS LEU THR VAL THR CYS SER GLN ASN MET SEQRES 3 B 242 ASN HIS GLU TYR MET SER TRP TYR ARG GLN ASP PRO GLY SEQRES 4 B 242 LEU GLY LEU ARG GLN ILE TYR TYR SER MET ASN VAL GLU SEQRES 5 B 242 VAL THR ASP LYS GLY ASP VAL PRO GLU GLY TYR LYS VAL SEQRES 6 B 242 SER ARG LYS GLU LYS ARG ASN PHE PRO LEU ILE LEU GLU SEQRES 7 B 242 SER PRO SER PRO ASN GLN THR SER LEU TYR PHE CYS ALA SEQRES 8 B 242 SER ARG LEU THR GLY ARG VAL HIS GLY TYR THR PHE GLY SEQRES 9 B 242 SER GLY THR ARG LEU THR VAL VAL GLU ASP LEU LYS ASN SEQRES 10 B 242 VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER GLU SEQRES 11 B 242 ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL CYS SEQRES 12 B 242 LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU LEU SER SEQRES 13 B 242 TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL CYS SEQRES 14 B 242 THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU ASN SEQRES 15 B 242 ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG VAL SER SEQRES 16 B 242 ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG CYS SEQRES 17 B 242 GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU TRP SEQRES 18 B 242 THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SER SEQRES 19 B 242 ALA GLU ALA TRP GLY ARG ALA ASP HET CL A 301 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *462(H2 O) HELIX 1 AA1 GLN A 79 THR A 83 5 5 HELIX 2 AA2 ARG A 164 ASP A 167 5 4 HELIX 3 AA3 ALA A 183 PHE A 188 1 6 HELIX 4 AA4 SER B 80 THR B 84 5 5 HELIX 5 AA5 ASP B 113 VAL B 117 5 5 HELIX 6 AA6 SER B 128 GLN B 136 1 9 HELIX 7 AA7 ALA B 195 GLN B 199 1 5 SHEET 1 AA1 5 LEU A 3 SER A 6 0 SHEET 2 AA1 5 LEU A 18 SER A 24 -1 O ASN A 23 N GLU A 4 SHEET 3 AA1 5 ASP A 70 ILE A 75 -1 O LEU A 73 N VAL A 20 SHEET 4 AA1 5 LEU A 60 PHE A 64 -1 N THR A 61 O HIS A 74 SHEET 5 AA1 5 VAL A 54 LEU A 57 -1 N LYS A 55 O PHE A 62 SHEET 1 AA2 5 PHE A 9 GLN A 13 0 SHEET 2 AA2 5 THR A 105 ASN A 110 1 O THR A 108 N LEU A 10 SHEET 3 AA2 5 GLY A 84 TYR A 91 -1 N TYR A 86 O THR A 105 SHEET 4 AA2 5 SER A 30 GLN A 36 -1 N GLN A 36 O LEU A 85 SHEET 5 AA2 5 VAL A 43 VAL A 48 -1 O LEU A 45 N TRP A 33 SHEET 1 AA3 4 PHE A 9 GLN A 13 0 SHEET 2 AA3 4 THR A 105 ASN A 110 1 O THR A 108 N LEU A 10 SHEET 3 AA3 4 GLY A 84 TYR A 91 -1 N TYR A 86 O THR A 105 SHEET 4 AA3 4 LEU A 99 PHE A 101 -1 O THR A 100 N GLY A 90 SHEET 1 AA4 8 VAL A 153 ILE A 155 0 SHEET 2 AA4 8 PHE A 168 SER A 177 -1 O TRP A 176 N TYR A 154 SHEET 3 AA4 8 SER A 128 THR A 137 -1 N CYS A 134 O ALA A 175 SHEET 4 AA4 8 ALA A 119 ASP A 125 -1 N TYR A 121 O LEU A 135 SHEET 5 AA4 8 GLU B 121 GLU B 126 -1 O GLU B 126 N ARG A 124 SHEET 6 AA4 8 LYS B 137 PHE B 147 -1 O VAL B 141 N PHE B 125 SHEET 7 AA4 8 TYR B 185 SER B 194 -1 O LEU B 191 N LEU B 140 SHEET 8 AA4 8 VAL B 167 THR B 169 -1 N CYS B 168 O ARG B 190 SHEET 1 AA5 8 CYS A 159 MET A 163 0 SHEET 2 AA5 8 PHE A 168 SER A 177 -1 O PHE A 168 N MET A 163 SHEET 3 AA5 8 SER A 128 THR A 137 -1 N CYS A 134 O ALA A 175 SHEET 4 AA5 8 ALA A 119 ASP A 125 -1 N TYR A 121 O LEU A 135 SHEET 5 AA5 8 GLU B 121 GLU B 126 -1 O GLU B 126 N ARG A 124 SHEET 6 AA5 8 LYS B 137 PHE B 147 -1 O VAL B 141 N PHE B 125 SHEET 7 AA5 8 TYR B 185 SER B 194 -1 O LEU B 191 N LEU B 140 SHEET 8 AA5 8 LEU B 174 LYS B 175 -1 N LEU B 174 O ALA B 186 SHEET 1 AA6 4 VAL B 2 ASN B 5 0 SHEET 2 AA6 4 LEU B 17 GLN B 23 -1 O SER B 22 N THR B 3 SHEET 3 AA6 4 LEU B 74 LEU B 76 -1 O LEU B 74 N VAL B 19 SHEET 4 AA6 4 LYS B 63 VAL B 64 -1 N LYS B 63 O ILE B 75 SHEET 1 AA7 6 TYR B 8 VAL B 12 0 SHEET 2 AA7 6 THR B 106 VAL B 111 1 O THR B 109 N LEU B 9 SHEET 3 AA7 6 SER B 85 ARG B 92 -1 N TYR B 87 O THR B 106 SHEET 4 AA7 6 TYR B 29 ASP B 36 -1 N TYR B 33 O PHE B 88 SHEET 5 AA7 6 GLY B 40 ASN B 49 -1 O ILE B 44 N TRP B 32 SHEET 6 AA7 6 VAL B 52 LYS B 55 -1 O ASP B 54 N TYR B 46 SHEET 1 AA8 4 TYR B 8 VAL B 12 0 SHEET 2 AA8 4 THR B 106 VAL B 111 1 O THR B 109 N LEU B 9 SHEET 3 AA8 4 SER B 85 ARG B 92 -1 N TYR B 87 O THR B 106 SHEET 4 AA8 4 THR B 101 PHE B 102 -1 O THR B 101 N SER B 91 SHEET 1 AA9 4 LYS B 161 VAL B 163 0 SHEET 2 AA9 4 VAL B 152 VAL B 158 -1 N VAL B 158 O LYS B 161 SHEET 3 AA9 4 HIS B 204 PHE B 211 -1 O GLN B 208 N SER B 155 SHEET 4 AA9 4 GLN B 230 TRP B 237 -1 O GLN B 230 N PHE B 211 SSBOND 1 CYS A 22 CYS A 88 1555 1555 2.04 SSBOND 2 CYS A 134 CYS A 184 1555 1555 2.04 SSBOND 3 CYS A 159 CYS B 168 1555 1555 2.03 SSBOND 4 CYS B 21 CYS B 89 1555 1555 1.99 SSBOND 5 CYS B 142 CYS B 207 1555 1555 1.98 CISPEP 1 SER A 6 PRO A 7 0 -12.10 CISPEP 2 ASN B 5 PRO B 6 0 -6.17 CISPEP 3 TYR B 148 PRO B 149 0 -0.69 CRYST1 39.679 77.228 67.680 90.00 104.38 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025202 0.000000 0.006461 0.00000 SCALE2 0.000000 0.012949 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015253 0.00000