HEADER IMMUNE SYSTEM 30-SEP-21 7SEN TITLE CRYSTAL STRUCTURE OF FAB CONTAINING A FLUORESCENT NONCANONICAL AMINO TITLE 2 ACID WITH BLOCKED EXCITED STATE PROTON TRANSFER COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5C8* FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5C8* FAB LIGHT CHAIN; COMPND 8 CHAIN: L; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FRAGMENT ANTIGEN BINDING (FAB), NONCANONICAL AMINO ACID, 7- KEYWDS 2 HYDROXYCOUMARIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.N.HENDERSON,J.H.MILLS,C.R.SIMMONS REVDAT 4 15-NOV-23 7SEN 1 LINK REVDAT 3 18-OCT-23 7SEN 1 REMARK REVDAT 2 27-APR-22 7SEN 1 JRNL REVDAT 1 02-FEB-22 7SEN 0 JRNL AUTH J.N.HENDERSON,C.R.SIMMONS,J.H.MILLS JRNL TITL STRUCTURAL BASIS FOR BLOCKED EXCITED STATE PROTON TRANSFER JRNL TITL 2 IN A FLUORESCENT, PHOTOACIDIC NON-CANONICAL AMINO JRNL TITL 3 ACID-CONTAINING ANTIBODY FRAGMENT. JRNL REF J.MOL.BIOL. V. 434 67455 2022 JRNL REFN ESSN 1089-8638 JRNL PMID 35033559 JRNL DOI 10.1016/J.JMB.2022.167455 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 20380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1090 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1021 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3266 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.22000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.289 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.226 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.196 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.480 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3375 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3020 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4606 ; 1.803 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7004 ; 1.009 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 441 ; 7.555 ; 5.023 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;36.894 ;25.200 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 513 ;14.693 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;20.465 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 524 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3857 ; 0.002 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 725 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 117 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6406 -2.3242 83.3478 REMARK 3 T TENSOR REMARK 3 T11: 0.0773 T22: 0.0016 REMARK 3 T33: 0.0378 T12: -0.0009 REMARK 3 T13: 0.0508 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.1924 L22: 1.8790 REMARK 3 L33: 1.6283 L12: 0.8635 REMARK 3 L13: 0.3389 L23: 1.3256 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.0100 S13: -0.0435 REMARK 3 S21: -0.1125 S22: 0.0154 S23: -0.0809 REMARK 3 S31: -0.0782 S32: 0.0422 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 118 H 226 REMARK 3 ORIGIN FOR THE GROUP (A): 18.4179 -10.5647 112.1917 REMARK 3 T TENSOR REMARK 3 T11: 0.0414 T22: 0.0212 REMARK 3 T33: 0.0159 T12: -0.0079 REMARK 3 T13: 0.0222 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.0677 L22: 0.8584 REMARK 3 L33: 1.1034 L12: 0.1430 REMARK 3 L13: -0.1011 L23: -0.5138 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: 0.0028 S13: -0.0030 REMARK 3 S21: 0.0909 S22: -0.0421 S23: 0.0110 REMARK 3 S31: -0.0347 S32: 0.1173 S33: 0.0232 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 111 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0250 -5.7784 80.1722 REMARK 3 T TENSOR REMARK 3 T11: 0.0779 T22: 0.0199 REMARK 3 T33: 0.0304 T12: -0.0128 REMARK 3 T13: 0.0452 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.8902 L22: 0.5909 REMARK 3 L33: 1.6845 L12: 0.0273 REMARK 3 L13: -0.1012 L23: -0.1762 REMARK 3 S TENSOR REMARK 3 S11: -0.0246 S12: 0.1251 S13: 0.0260 REMARK 3 S21: -0.0135 S22: 0.0296 S23: 0.0043 REMARK 3 S31: 0.1008 S32: -0.0142 S33: -0.0050 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 112 L 215 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6155 -3.6922 118.1874 REMARK 3 T TENSOR REMARK 3 T11: 0.1211 T22: 0.0063 REMARK 3 T33: 0.0491 T12: -0.0215 REMARK 3 T13: 0.0719 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.0386 L22: 0.8184 REMARK 3 L33: 1.2905 L12: 0.4605 REMARK 3 L13: 0.7924 L23: 0.9571 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: -0.0019 S13: 0.0082 REMARK 3 S21: 0.1642 S22: -0.0047 S23: 0.0499 REMARK 3 S31: 0.0841 S32: 0.0175 S33: -0.0134 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7SEN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000260106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 72.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.41100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 6BJZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27-33% PEG 3350, 0.1 M CITRIC REMARK 280 ACID/SODIUM CITRATE PH 3.0-4.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.08700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.90550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.08700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.90550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 132 REMARK 465 SER H 133 REMARK 465 LYS H 134 REMARK 465 SER H 135 REMARK 465 CYS H 221 REMARK 465 GLY L 216 REMARK 465 GLU L 217 REMARK 465 CYS L 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 13 NZ REMARK 470 LYS H 63 CG CD CE NZ REMARK 470 ARG H 87 CZ NH1 NH2 REMARK 470 LYS H 206 CD CE NZ REMARK 470 LYS H 211 CD CE NZ REMARK 470 LYS H 214 NZ REMARK 470 LYS H 215 CE NZ REMARK 470 LYS H 219 CB CG CD CE NZ REMARK 470 SER H 220 OG REMARK 470 LYS H 223 CB CG CD CE NZ REMARK 470 ARG L 18 CZ NH1 NH2 REMARK 470 ARG L 24 CD NE CZ NH1 NH2 REMARK 470 SER L 32 CB OG REMARK 470 TYR L 34 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS L 107 CE NZ REMARK 470 LYS L 130 CE NZ REMARK 470 LYS L 173 CE NZ REMARK 470 LYS L 192 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 85 80.64 21.20 REMARK 500 ASN H 103 -96.46 -105.88 REMARK 500 ASP H 149 61.76 74.92 REMARK 500 TYR L 36 46.13 -106.90 REMARK 500 ALA L 55 -42.69 71.91 REMARK 500 PHE L 87 109.81 -54.04 REMARK 500 PRO L 145 -168.89 -79.64 REMARK 500 ASN L 156 -2.27 69.27 REMARK 500 REMARK 500 REMARK: NULL DBREF 7SEN H 1 226 PDB 7SEN 7SEN 1 226 DBREF 7SEN L 1 218 PDB 7SEN 7SEN 1 218 SEQRES 1 H 226 PCA VAL GLN LEU VAL GLN SER GLY ALA GLU VAL VAL LYS SEQRES 2 H 226 PRO GLY ALA SER VAL LYS LEU SER CYS LYS ALA SER GLY SEQRES 3 H 226 TYR ILE PHE THR SER TYR TYR MET TYR TRP VAL LYS GLN SEQRES 4 H 226 ALA PRO GLY GLN GLY LEU GLU LEU ILE GLY GLU ILE ASN SEQRES 5 H 226 PRO SER ASN GLY ASP THR ASN PHE ASN GLU LYS PHE LYS SEQRES 6 H 226 SER LYS ALA THR LEU THR VAL ASP LYS SER ALA SER THR SEQRES 7 H 226 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 226 ALA VAL TYR TYR CYS THR ARG SER ASP GLY ARG ASN ASP SEQRES 9 H 226 MET ASP SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 226 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 226 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 226 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 226 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 226 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 226 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 226 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 226 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 18 H 226 ASP LYS THR HIS THR SEQRES 1 L 218 ASP ILE VAL LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 218 SER PRO GLY GLU ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 L 218 GLN ARG VAL SER SER SER THR TYR SER TYR MET HIS TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 L 218 LYS TYR ALA SER ASN LEU GLU SER GLY VAL PRO ALA ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 L 218 ILE SER SER VAL GLU PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 L 218 CYS GLN HIS SER TRP GLU DV7 PRO PRO THR PHE GLY GLY SEQRES 9 L 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 L 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 L 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 L 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 L 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 L 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 L 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS HET PCA H 1 8 HET DV7 L 98 18 HETNAM PCA PYROGLUTAMIC ACID HETNAM DV7 L-(7-HYDROXYCOUMARIN-4-YL)ETHYLGLYCINE HETSYN DV7 (2S)-2-AMINO-4-(7-HYDROXY-2-OXO-2H-1-BENZOPYRAN-4-YL) HETSYN 2 DV7 BUTANOIC ACID FORMUL 1 PCA C5 H7 N O3 FORMUL 2 DV7 C13 H13 N O5 FORMUL 3 HOH *131(H2 O) HELIX 1 AA1 ILE H 28 TYR H 32 5 5 HELIX 2 AA2 GLU H 62 LYS H 65 5 4 HELIX 3 AA3 LYS H 74 ALA H 76 5 3 HELIX 4 AA4 ARG H 87 THR H 91 5 5 HELIX 5 AA5 SER H 161 ALA H 163 5 3 HELIX 6 AA6 SER H 192 LEU H 194 5 3 HELIX 7 AA7 LYS H 206 ASN H 209 5 4 HELIX 8 AA8 GLU L 83 PHE L 87 5 5 HELIX 9 AA9 SER L 125 SER L 131 1 7 HELIX 10 AB1 LYS L 187 LYS L 192 1 6 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O LEU H 83 N VAL H 18 SHEET 4 AA1 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AA2 6 GLU H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA2 6 ALA H 92 SER H 99 -1 N TYR H 94 O THR H 112 SHEET 4 AA2 6 TYR H 33 GLN H 39 -1 N GLN H 39 O VAL H 93 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 AA2 6 THR H 58 PHE H 60 -1 O ASN H 59 N GLU H 50 SHEET 1 AA3 4 GLU H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 AA3 4 ALA H 92 SER H 99 -1 N TYR H 94 O THR H 112 SHEET 4 AA3 4 SER H 107 TRP H 108 -1 O SER H 107 N ARG H 98 SHEET 1 AA4 4 SER H 125 LEU H 129 0 SHEET 2 AA4 4 THR H 140 TYR H 150 -1 O LEU H 146 N PHE H 127 SHEET 3 AA4 4 TYR H 181 PRO H 190 -1 O LEU H 183 N VAL H 147 SHEET 4 AA4 4 HIS H 169 THR H 170 -1 N HIS H 169 O VAL H 186 SHEET 1 AA5 4 SER H 125 LEU H 129 0 SHEET 2 AA5 4 THR H 140 TYR H 150 -1 O LEU H 146 N PHE H 127 SHEET 3 AA5 4 TYR H 181 PRO H 190 -1 O LEU H 183 N VAL H 147 SHEET 4 AA5 4 VAL H 174 LEU H 175 -1 N VAL H 174 O SER H 182 SHEET 1 AA6 3 THR H 156 TRP H 159 0 SHEET 2 AA6 3 ILE H 200 HIS H 205 -1 O ASN H 202 N SER H 158 SHEET 3 AA6 3 THR H 210 LYS H 215 -1 O VAL H 212 N VAL H 203 SHEET 1 AA7 4 LEU L 4 SER L 7 0 SHEET 2 AA7 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 74 ILE L 79 -1 O PHE L 75 N CYS L 23 SHEET 4 AA7 4 PHE L 66 SER L 71 -1 N SER L 67 O THR L 78 SHEET 1 AA8 6 THR L 10 VAL L 13 0 SHEET 2 AA8 6 THR L 106 ILE L 110 1 O LYS L 107 N LEU L 11 SHEET 3 AA8 6 ALA L 88 HIS L 94 -1 N TYR L 90 O THR L 106 SHEET 4 AA8 6 MET L 37 GLN L 42 -1 N GLN L 42 O THR L 89 SHEET 5 AA8 6 LYS L 49 LYS L 53 -1 O ILE L 52 N TRP L 39 SHEET 6 AA8 6 ASN L 57 LEU L 58 -1 O ASN L 57 N LYS L 53 SHEET 1 AA9 4 THR L 10 VAL L 13 0 SHEET 2 AA9 4 THR L 106 ILE L 110 1 O LYS L 107 N LEU L 11 SHEET 3 AA9 4 ALA L 88 HIS L 94 -1 N TYR L 90 O THR L 106 SHEET 4 AA9 4 THR L 101 PHE L 102 -1 O THR L 101 N HIS L 94 SHEET 1 AB1 4 SER L 118 PHE L 122 0 SHEET 2 AB1 4 THR L 133 PHE L 143 -1 O LEU L 139 N PHE L 120 SHEET 3 AB1 4 TYR L 177 SER L 186 -1 O LEU L 185 N ALA L 134 SHEET 4 AB1 4 SER L 163 VAL L 167 -1 N GLN L 164 O THR L 182 SHEET 1 AB2 4 ALA L 157 LEU L 158 0 SHEET 2 AB2 4 ALA L 148 VAL L 154 -1 N VAL L 154 O ALA L 157 SHEET 3 AB2 4 VAL L 195 HIS L 202 -1 O GLU L 199 N GLN L 151 SHEET 4 AB2 4 VAL L 209 ASN L 214 -1 O VAL L 209 N VAL L 200 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 2 CYS H 145 CYS H 201 1555 1555 2.07 SSBOND 3 CYS L 23 CYS L 92 1555 1555 2.07 SSBOND 4 CYS L 138 CYS L 198 1555 1555 2.03 LINK C PCA H 1 N VAL H 2 1555 1555 1.33 LINK C GLU L 97 N DV7 L 98 1555 1555 1.34 LINK C DV7 L 98 N PRO L 99 1555 1555 1.34 CISPEP 1 PHE H 151 PRO H 152 0 -15.66 CISPEP 2 GLU H 153 PRO H 154 0 -0.60 CISPEP 3 SER L 7 PRO L 8 0 -11.20 CISPEP 4 DV7 L 98 PRO L 99 0 -9.05 CISPEP 5 TYR L 144 PRO L 145 0 -4.05 CRYST1 90.174 59.811 73.043 90.00 96.09 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011090 0.000000 0.001184 0.00000 SCALE2 0.000000 0.016719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013768 0.00000 HETATM 1 N PCA H 1 23.010 -23.728 83.327 1.00 49.62 N ANISOU 1 N PCA H 1 7270 4839 6743 -186 320 92 N HETATM 2 CA PCA H 1 22.437 -22.406 83.653 1.00 46.90 C ANISOU 2 CA PCA H 1 6871 4653 6294 -232 375 103 C HETATM 3 CB PCA H 1 22.293 -22.432 85.176 1.00 47.39 C ANISOU 3 CB PCA H 1 7065 4671 6268 -305 320 207 C HETATM 4 CG PCA H 1 23.284 -23.500 85.620 1.00 49.91 C ANISOU 4 CG PCA H 1 7489 4806 6665 -242 192 265 C HETATM 5 CD PCA H 1 23.351 -24.418 84.410 1.00 51.27 C ANISOU 5 CD PCA H 1 7620 4911 6948 -198 219 182 C HETATM 6 OE PCA H 1 23.667 -25.611 84.459 1.00 54.41 O ANISOU 6 OE PCA H 1 8112 5144 7416 -178 149 197 O HETATM 7 C PCA H 1 23.248 -21.180 83.291 1.00 42.92 C ANISOU 7 C PCA H 1 6242 4249 5816 -139 371 77 C HETATM 8 O PCA H 1 24.436 -21.122 83.574 1.00 43.47 O ANISOU 8 O PCA H 1 6296 4267 5952 -51 292 96 O