HEADER GENE REGULATION 12-OCT-21 7SI5 TITLE CRYSTAL STRUCTURE OF EED WITH MRTX-1919 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYCOMB PROTEIN EED; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEED,EMBRYONIC ECTODERM DEVELOPMENT PROTEIN,WD PROTEIN COMPND 5 ASSOCIATING WITH INTEGRIN CYTOPLASMIC TAILS 1,WAIT-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EED; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 CODON PLUS(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEMB32_BSA KEYWDS EED, ONCOLOGY, TRANSCRIPTION-TRANSFERASE, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR R.J.GUNN,A.C.BURNS,J.D.LAWSON,M.A.MARX REVDAT 2 03-APR-24 7SI5 1 REMARK REVDAT 1 09-NOV-22 7SI5 0 JRNL AUTH A.C.BURNS JRNL TITL CRYSTAL STRUCTURE OF EED WITH MRTX-1919 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2890 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 46300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.220 REMARK 3 FREE R VALUE TEST SET COUNT : 1955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.7900 - 1.7500 0.97 2996 170 0.2411 0.2798 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 1.7798 -18.1370 26.0384 REMARK 3 T TENSOR REMARK 3 T11: 0.1676 T22: 0.1043 REMARK 3 T33: 0.1799 T12: -0.0111 REMARK 3 T13: -0.0005 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 2.9553 L22: 2.8211 REMARK 3 L33: 3.2791 L12: 0.0385 REMARK 3 L13: 0.3462 L23: -0.2596 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: -0.0312 S13: 0.1047 REMARK 3 S21: 0.1075 S22: 0.0211 S23: -0.2358 REMARK 3 S31: -0.0749 S32: 0.1779 S33: -0.0404 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -3.7112 -12.1835 24.0520 REMARK 3 T TENSOR REMARK 3 T11: 0.1511 T22: 0.1167 REMARK 3 T33: 0.1689 T12: 0.0146 REMARK 3 T13: 0.0142 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.6431 L22: 2.1030 REMARK 3 L33: 2.5807 L12: 0.8310 REMARK 3 L13: 0.6207 L23: 0.2742 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.0256 S13: 0.0920 REMARK 3 S21: 0.2399 S22: -0.0072 S23: 0.0676 REMARK 3 S31: -0.0116 S32: -0.0275 S33: -0.0039 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -11.6343 -19.6041 8.6764 REMARK 3 T TENSOR REMARK 3 T11: 0.0735 T22: 0.1209 REMARK 3 T33: 0.1339 T12: 0.0090 REMARK 3 T13: 0.0007 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.5812 L22: 1.8171 REMARK 3 L33: 1.1176 L12: 0.3801 REMARK 3 L13: 0.1826 L23: 0.3104 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: -0.0041 S13: 0.0704 REMARK 3 S21: 0.0045 S22: 0.0165 S23: 0.1029 REMARK 3 S31: -0.0584 S32: -0.0571 S33: -0.0107 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -14.4581 -12.8125 -7.1802 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.1742 REMARK 3 T33: 0.1386 T12: -0.0086 REMARK 3 T13: -0.0261 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 3.3313 L22: 8.1347 REMARK 3 L33: 1.9994 L12: -2.0401 REMARK 3 L13: 0.1545 L23: -0.4252 REMARK 3 S TENSOR REMARK 3 S11: 0.0780 S12: 0.1180 S13: 0.3167 REMARK 3 S21: -0.3203 S22: -0.0725 S23: -0.0132 REMARK 3 S31: -0.0793 S32: 0.1366 S33: -0.0088 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -9.9455 -38.0691 8.9217 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.1343 REMARK 3 T33: 0.1605 T12: -0.0274 REMARK 3 T13: 0.0038 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.9945 L22: 2.1907 REMARK 3 L33: 3.1719 L12: -0.8144 REMARK 3 L13: 1.8367 L23: -1.1336 REMARK 3 S TENSOR REMARK 3 S11: 0.0598 S12: 0.0561 S13: -0.0924 REMARK 3 S21: -0.0609 S22: -0.0214 S23: 0.0857 REMARK 3 S31: 0.2264 S32: -0.0388 S33: -0.0388 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -1.1155 -36.3791 20.7859 REMARK 3 T TENSOR REMARK 3 T11: 0.1232 T22: 0.0971 REMARK 3 T33: 0.1084 T12: -0.0028 REMARK 3 T13: 0.0040 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.7552 L22: 1.8513 REMARK 3 L33: 1.4373 L12: -0.1166 REMARK 3 L13: -0.0704 L23: 0.1625 REMARK 3 S TENSOR REMARK 3 S11: 0.0375 S12: 0.0006 S13: -0.0117 REMARK 3 S21: 0.0943 S22: -0.0360 S23: -0.0424 REMARK 3 S31: 0.0487 S32: -0.0079 S33: -0.0060 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 2.9169 -23.6298 27.0436 REMARK 3 T TENSOR REMARK 3 T11: 0.1681 T22: 0.1018 REMARK 3 T33: 0.1581 T12: 0.0225 REMARK 3 T13: -0.0080 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.2220 L22: 2.6216 REMARK 3 L33: 4.5647 L12: 1.9182 REMARK 3 L13: -0.9114 L23: -1.1660 REMARK 3 S TENSOR REMARK 3 S11: 0.0784 S12: 0.0297 S13: -0.1473 REMARK 3 S21: 0.0462 S22: -0.0266 S23: -0.2337 REMARK 3 S31: 0.0423 S32: 0.1751 S33: -0.0677 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SI5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000259781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46304 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 49.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.030 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.57 REMARK 200 R MERGE FOR SHELL (I) : 0.50800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.550 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: BE4 MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.1 MM SODIUM FORMATE, 100 MM HEPES PH REMARK 280 7.5, SEEDING, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.93000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.96000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.96000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.93000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 40 REMARK 465 ALA A 41 REMARK 465 VAL A 42 REMARK 465 SER A 43 REMARK 465 ILE A 44 REMARK 465 GLU A 45 REMARK 465 SER A 46 REMARK 465 GLY A 47 REMARK 465 THR A 48 REMARK 465 ASN A 49 REMARK 465 THR A 50 REMARK 465 GLU A 51 REMARK 465 ARG A 52 REMARK 465 PRO A 53 REMARK 465 ASP A 54 REMARK 465 THR A 55 REMARK 465 PRO A 56 REMARK 465 THR A 57 REMARK 465 ASN A 58 REMARK 465 THR A 59 REMARK 465 PRO A 60 REMARK 465 ASN A 61 REMARK 465 ALA A 62 REMARK 465 PRO A 63 REMARK 465 GLY A 64 REMARK 465 ARG A 65 REMARK 465 LYS A 66 REMARK 465 SER A 67 REMARK 465 TRP A 68 REMARK 465 GLY A 69 REMARK 465 LYS A 70 REMARK 465 GLY A 71 REMARK 465 LYS A 72 REMARK 465 TRP A 73 REMARK 465 LYS A 74 REMARK 465 SER A 75 REMARK 465 LYS A 76 REMARK 465 LYS A 77 REMARK 465 CYS A 78 REMARK 465 LYS A 79 REMARK 465 ARG A 441 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 80 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 LYS A 284 CG CD CE NZ REMARK 470 ARG A 306 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 344 CG CD CE NZ REMARK 470 LYS A 408 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 303 O HOH A 601 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 118 -139.52 47.10 REMARK 500 LEU A 135 -90.15 -105.59 REMARK 500 ASN A 191 -165.93 -173.56 REMARK 500 HIS A 213 5.13 83.24 REMARK 500 PHE A 299 148.41 -171.61 REMARK 500 SER A 323 -152.72 -121.49 REMARK 500 TYR A 365 63.56 74.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 86 OD1 REMARK 620 2 SER A 87 O 80.8 REMARK 620 3 HOH A 847 O 86.4 78.9 REMARK 620 4 HOH A 888 O 84.6 108.9 166.9 REMARK 620 5 HOH A 902 O 161.9 89.0 106.4 84.6 REMARK 620 6 HOH A 903 O 88.4 158.3 81.7 88.5 105.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 282 O REMARK 620 2 THR A 285 O 86.1 REMARK 620 3 FMT A 510 O2 93.6 88.6 REMARK 620 4 HOH A 650 O 87.4 94.7 176.6 REMARK 620 5 HOH A 781 O 156.5 77.9 102.9 77.1 REMARK 620 6 HOH A 915 O 99.9 174.1 91.2 85.4 96.4 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7SI4 RELATED DB: PDB DBREF 7SI5 A 40 441 UNP O75530 EED_HUMAN 40 441 SEQRES 1 A 402 ASP ALA VAL SER ILE GLU SER GLY THR ASN THR GLU ARG SEQRES 2 A 402 PRO ASP THR PRO THR ASN THR PRO ASN ALA PRO GLY ARG SEQRES 3 A 402 LYS SER TRP GLY LYS GLY LYS TRP LYS SER LYS LYS CYS SEQRES 4 A 402 LYS TYR SER PHE LYS CYS VAL ASN SER LEU LYS GLU ASP SEQRES 5 A 402 HIS ASN GLN PRO LEU PHE GLY VAL GLN PHE ASN TRP HIS SEQRES 6 A 402 SER LYS GLU GLY ASP PRO LEU VAL PHE ALA THR VAL GLY SEQRES 7 A 402 SER ASN ARG VAL THR LEU TYR GLU CYS HIS SER GLN GLY SEQRES 8 A 402 GLU ILE ARG LEU LEU GLN SER TYR VAL ASP ALA ASP ALA SEQRES 9 A 402 ASP GLU ASN PHE TYR THR CYS ALA TRP THR TYR ASP SER SEQRES 10 A 402 ASN THR SER HIS PRO LEU LEU ALA VAL ALA GLY SER ARG SEQRES 11 A 402 GLY ILE ILE ARG ILE ILE ASN PRO ILE THR MET GLN CYS SEQRES 12 A 402 ILE LYS HIS TYR VAL GLY HIS GLY ASN ALA ILE ASN GLU SEQRES 13 A 402 LEU LYS PHE HIS PRO ARG ASP PRO ASN LEU LEU LEU SER SEQRES 14 A 402 VAL SER LYS ASP HIS ALA LEU ARG LEU TRP ASN ILE GLN SEQRES 15 A 402 THR ASP THR LEU VAL ALA ILE PHE GLY GLY VAL GLU GLY SEQRES 16 A 402 HIS ARG ASP GLU VAL LEU SER ALA ASP TYR ASP LEU LEU SEQRES 17 A 402 GLY GLU LYS ILE MET SER CYS GLY MET ASP HIS SER LEU SEQRES 18 A 402 LYS LEU TRP ARG ILE ASN SER LYS ARG MET MET ASN ALA SEQRES 19 A 402 ILE LYS GLU SER TYR ASP TYR ASN PRO ASN LYS THR ASN SEQRES 20 A 402 ARG PRO PHE ILE SER GLN LYS ILE HIS PHE PRO ASP PHE SEQRES 21 A 402 SER THR ARG ASP ILE HIS ARG ASN TYR VAL ASP CYS VAL SEQRES 22 A 402 ARG TRP LEU GLY ASP LEU ILE LEU SER LYS SER CYS GLU SEQRES 23 A 402 ASN ALA ILE VAL CYS TRP LYS PRO GLY LYS MET GLU ASP SEQRES 24 A 402 ASP ILE ASP LYS ILE LYS PRO SER GLU SER ASN VAL THR SEQRES 25 A 402 ILE LEU GLY ARG PHE ASP TYR SER GLN CYS ASP ILE TRP SEQRES 26 A 402 TYR MET ARG PHE SER MET ASP PHE TRP GLN LYS MET LEU SEQRES 27 A 402 ALA LEU GLY ASN GLN VAL GLY LYS LEU TYR VAL TRP ASP SEQRES 28 A 402 LEU GLU VAL GLU ASP PRO HIS LYS ALA LYS CYS THR THR SEQRES 29 A 402 LEU THR HIS HIS LYS CYS GLY ALA ALA ILE ARG GLN THR SEQRES 30 A 402 SER PHE SER ARG ASP SER SER ILE LEU ILE ALA VAL CYS SEQRES 31 A 402 ASP ASP ALA SER ILE TRP ARG TRP ASP ARG LEU ARG HET NA A 501 1 HET NA A 502 1 HET 9L0 A 503 30 HET EDO A 504 4 HET EDO A 505 4 HET FMT A 506 3 HET FMT A 507 3 HET FMT A 508 3 HET FMT A 509 3 HET FMT A 510 3 HET FMT A 511 3 HET FMT A 512 3 HET FMT A 513 3 HET FMT A 514 3 HET FMT A 515 3 HET FMT A 516 3 HET FMT A 517 3 HET FMT A 518 3 HETNAM NA SODIUM ION HETNAM 9L0 (4R)-8-(1,3-DIMETHYL-1H-PYRAZOL-5-YL)-5-{[(5-FLUORO-2, HETNAM 2 9L0 3-DIHYDRO-1-BENZOFURAN-4-YL)METHYL]AMINO}IMIDAZO[1,2- HETNAM 3 9L0 C]PYRIMIDINE-2-CARBONITRILE HETNAM EDO 1,2-ETHANEDIOL HETNAM FMT FORMIC ACID HETSYN 9L0 MRTX-1919 HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NA 2(NA 1+) FORMUL 4 9L0 C21 H18 F N7 O FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 FMT 13(C H2 O2) FORMUL 20 HOH *369(H2 O) HELIX 1 AA1 SER A 267 ASP A 279 1 13 HELIX 2 AA2 ASN A 281 THR A 285 5 5 HELIX 3 AA3 ASP A 339 ILE A 343 5 5 HELIX 4 AA4 ASP A 395 ALA A 399 5 5 SHEET 1 AA1 4 SER A 81 LYS A 89 0 SHEET 2 AA1 4 SER A 433 LEU A 440 -1 O ILE A 434 N LEU A 88 SHEET 3 AA1 4 ILE A 424 CYS A 429 -1 N LEU A 425 O TRP A 437 SHEET 4 AA1 4 ILE A 413 PHE A 418 -1 N SER A 417 O ILE A 426 SHEET 1 AA2 4 LEU A 96 PHE A 101 0 SHEET 2 AA2 4 LEU A 111 GLY A 117 -1 O ALA A 114 N GLN A 100 SHEET 3 AA2 4 ARG A 120 CYS A 126 -1 O ARG A 120 N GLY A 117 SHEET 4 AA2 4 ILE A 132 VAL A 139 -1 O ARG A 133 N GLU A 125 SHEET 1 AA3 4 PHE A 147 TYR A 154 0 SHEET 2 AA3 4 PRO A 161 GLY A 167 -1 O ALA A 164 N ALA A 151 SHEET 3 AA3 4 ILE A 171 ASN A 176 -1 O ILE A 175 N LEU A 163 SHEET 4 AA3 4 GLN A 181 VAL A 187 -1 O ILE A 183 N ILE A 174 SHEET 1 AA4 5 ILE A 193 PHE A 198 0 SHEET 2 AA4 5 LEU A 205 SER A 210 -1 O LEU A 207 N LYS A 197 SHEET 3 AA4 5 LEU A 215 ASN A 219 -1 O TRP A 218 N LEU A 206 SHEET 4 AA4 5 THR A 224 PHE A 229 -1 O PHE A 229 N LEU A 215 SHEET 5 AA4 5 GLN A 292 ILE A 294 1 O ILE A 294 N ILE A 228 SHEET 1 AA5 4 VAL A 239 TYR A 244 0 SHEET 2 AA5 4 LYS A 250 GLY A 255 -1 O MET A 252 N ASP A 243 SHEET 3 AA5 4 LEU A 260 ARG A 264 -1 O TRP A 263 N ILE A 251 SHEET 4 AA5 4 PHE A 299 THR A 301 -1 O PHE A 299 N LEU A 262 SHEET 1 AA6 4 CYS A 311 LEU A 315 0 SHEET 2 AA6 4 LEU A 318 LYS A 322 -1 O LEU A 318 N LEU A 315 SHEET 3 AA6 4 ALA A 327 PRO A 333 -1 O VAL A 329 N SER A 321 SHEET 4 AA6 4 VAL A 350 ASP A 357 -1 O PHE A 356 N ILE A 328 SHEET 1 AA7 4 PHE A 368 MET A 370 0 SHEET 2 AA7 4 MET A 376 GLY A 380 -1 O ALA A 378 N SER A 369 SHEET 3 AA7 4 LEU A 386 ASP A 390 -1 O TYR A 387 N LEU A 379 SHEET 4 AA7 4 LYS A 400 LEU A 404 -1 O LYS A 400 N ASP A 390 LINK OD1 ASN A 86 NA NA A 501 1555 1555 2.51 LINK O SER A 87 NA NA A 501 1555 1555 2.39 LINK O PRO A 282 NA NA A 502 1555 1555 2.27 LINK O THR A 285 NA NA A 502 1555 1555 2.40 LINK NA NA A 501 O HOH A 847 1555 1555 2.32 LINK NA NA A 501 O HOH A 888 1555 1555 2.36 LINK NA NA A 501 O HOH A 902 1555 1555 2.45 LINK NA NA A 501 O HOH A 903 1555 1555 2.37 LINK NA NA A 502 O2 FMT A 510 1555 1555 2.53 LINK NA NA A 502 O HOH A 650 1555 4445 2.40 LINK NA NA A 502 O HOH A 781 1555 1555 2.49 LINK NA NA A 502 O HOH A 915 1555 1555 2.51 CRYST1 57.860 85.030 91.920 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017283 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011761 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010879 0.00000