HEADER TRANSFERASE 05-NOV-21 7SQI
TITLE CROSSLINKED CRYSTAL STRUCTURE OF TYPE II FATTY ACID SYNTHASE
TITLE 2 KETOSYNTHASE, FABB, AND C14-CRYPTO ACYL CARRIER PROTEIN, ACPP
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: BETA-KETOACYL-ACP SYNTHASE I;
COMPND 3 CHAIN: A, B;
COMPND 4 EC: 2.3.1.41;
COMPND 5 ENGINEERED: YES;
COMPND 6 MOL_ID: 2;
COMPND 7 MOLECULE: ACYL CARRIER PROTEIN;
COMPND 8 CHAIN: C, D;
COMPND 9 SYNONYM: ACP;
COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12;
SOURCE 3 ORGANISM_TAXID: 83333;
SOURCE 4 STRAIN: K12;
SOURCE 5 GENE: FABB, FAZ83_00695;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28;
SOURCE 11 MOL_ID: 2;
SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;
SOURCE 13 ORGANISM_TAXID: 562;
SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)
KEYWDS KETOSYNTHASE, CROSSLINK, FABB, ACP, KASI, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.CHEN,J.T.MINDREBO,T.D.DAVIS,J.P.NOEL,M.D.BURKART
REVDAT 4 13-NOV-24 7SQI 1 REMARK
REVDAT 3 18-OCT-23 7SQI 1 REMARK
REVDAT 2 23-NOV-22 7SQI 1 JRNL
REVDAT 1 03-AUG-22 7SQI 0
JRNL AUTH A.CHEN,J.T.MINDREBO,T.D.DAVIS,W.E.KIM,Y.KATSUYAMA,Z.JIANG,
JRNL AUTH 2 Y.OHNISHI,J.P.NOEL,M.D.BURKART
JRNL TITL MECHANISM-BASED CROSS-LINKING PROBES CAPTURE THE ESCHERICHIA
JRNL TITL 2 COLI KETOSYNTHASE FABB IN CONFORMATIONALLY DISTINCT
JRNL TITL 3 CATALYTIC STATES.
JRNL REF ACTA CRYSTALLOGR D STRUCT V. 78 1171 2022
JRNL REF 2 BIOL
JRNL REFN ISSN 2059-7983
JRNL PMID 36048156
JRNL DOI 10.1107/S2059798322007434
REMARK 2
REMARK 2 RESOLUTION. 1.70 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.19.2
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.10
REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 3 NUMBER OF REFLECTIONS : 104223
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : NULL
REMARK 3 R VALUE (WORKING SET) : 0.171
REMARK 3 FREE R VALUE : 0.205
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : NULL
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 1.7610 - 1.7000 0.99 0 0 0.3086 0.3285
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : NULL
REMARK 3 SHRINKAGE RADIUS : NULL
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 16.60
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.80
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : NULL NULL
REMARK 3 ANGLE : NULL NULL
REMARK 3 CHIRALITY : NULL NULL
REMARK 3 PLANARITY : NULL NULL
REMARK 3 DIHEDRAL : NULL NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7SQI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-21.
REMARK 100 THE DEPOSITION ID IS D_1000259707.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 03-JUL-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ALS
REMARK 200 BEAMLINE : 8.2.1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104223
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700
REMARK 200 RESOLUTION RANGE LOW (A) : 39.100
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 200 DATA REDUNDANCY : 12.00
REMARK 200 R MERGE (I) : 0.34200
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 527.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5
REMARK 200 DATA REDUNDANCY IN SHELL : 11.90
REMARK 200 R MERGE FOR SHELL (I) : 5.72500
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 6OKC
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 46.36
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.3 M SODIUM ACETATE,
REMARK 280 0.1 M SODIUM CACODYLATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 281K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.49500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.82000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.19000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.82000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.49500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.19000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 10750 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 30560 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET C 0
REMARK 465 SER C 1
REMARK 465 ALA C 77
REMARK 465 MET D 0
REMARK 465 ALA D 77
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 91 CG CD OE1 OE2
REMARK 470 GLU A 381 CG CD OE1 OE2
REMARK 470 LYS A 405 CG CD CE NZ
REMARK 470 LYS B 320 CG CD CE NZ
REMARK 470 GLU C 5 CG CD OE1 OE2
REMARK 470 LYS C 9 CG CD CE NZ
REMARK 470 GLU C 13 CB CG CD OE1 OE2
REMARK 470 VAL C 17 CB CG1 CG2
REMARK 470 LYS C 18 CG CD CE NZ
REMARK 470 GLN C 19 CB CG CD OE1 NE2
REMARK 470 GLU C 20 CB CG CD OE1 OE2
REMARK 470 ASN C 24 CB CG OD1 ND2
REMARK 470 ASN C 25 CG OD1 ND2
REMARK 470 GLU C 48 CG CD OE1 OE2
REMARK 470 GLU C 49 CG CD OE1 OE2
REMARK 470 ASP C 51 CB CG OD1 OD2
REMARK 470 THR C 52 CB OG1 CG2
REMARK 470 GLU C 53 CB CG CD OE1 OE2
REMARK 470 GLU C 57 CG CD OE1 OE2
REMARK 470 GLU C 58 CG CD OE1 OE2
REMARK 470 ALA C 59 CB
REMARK 470 GLU C 60 CG CD OE1 OE2
REMARK 470 LYS C 61 CB CG CD CE NZ
REMARK 470 GLN C 66 CB CG CD OE1 NE2
REMARK 470 ASP C 70 CB CG OD1 OD2
REMARK 470 ILE C 72 CB CG1 CG2 CD1
REMARK 470 LYS D 18 CG CD CE NZ
REMARK 470 GLU D 57 CG CD OE1 OE2
REMARK 470 GLU D 60 CG CD OE1 OE2
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 SER D 36 N CA C O CB OG
REMARK 480 LEU D 37 N CA C O CB CG CD1
REMARK 480 LEU D 37 CD2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH B 901 O HOH B 1019 1.84
REMARK 500 O HOH A 788 O HOH A 1024 1.92
REMARK 500 O HOH B 756 O HOH B 1019 1.95
REMARK 500 O HOH A 797 O HOH A 1011 2.06
REMARK 500 O HOH B 753 O HOH C 212 2.10
REMARK 500 OG1 THR A 57 O HOH A 601 2.11
REMARK 500 O HOH A 1040 O HOH A 1056 2.11
REMARK 500 O VAL A 304 O HOH A 602 2.12
REMARK 500 O HOH A 653 O HOH A 797 2.12
REMARK 500 O HOH A 1067 O HOH A 1070 2.14
REMARK 500 O HOH B 906 O HOH B 1018 2.14
REMARK 500 O HOH A 764 O HOH A 920 2.14
REMARK 500 OE2 GLU D 53 O HOH D 201 2.14
REMARK 500 O HOH A 884 O HOH A 909 2.15
REMARK 500 O HOH A 961 O HOH A 963 2.16
REMARK 500 O HOH D 257 O HOH D 261 2.16
REMARK 500 O HOH A 980 O HOH A 1075 2.16
REMARK 500 O HOH A 1080 O HOH A 1082 2.18
REMARK 500 O HOH A 840 O HOH A 904 2.18
REMARK 500 O HOH A 709 O HOH A 948 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 989 O HOH D 257 3644 2.14
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 161 48.51 -157.88
REMARK 500 ALA A 162 -128.43 52.26
REMARK 500 ALA A 162 -128.88 52.26
REMARK 500 ARG A 220 56.76 -152.17
REMARK 500 TYR A 222 -7.25 80.29
REMARK 500 ASP A 227 31.03 -148.32
REMARK 500 ALA A 267 -87.35 -140.73
REMARK 500 SER A 301 28.87 86.61
REMARK 500 LYS A 320 46.43 -95.38
REMARK 500 LEU A 335 -113.22 61.25
REMARK 500 ASN A 372 67.50 -114.82
REMARK 500 PHE A 392 155.87 -49.88
REMARK 500 SER B 161 43.15 -161.61
REMARK 500 ALA B 162 -130.69 54.47
REMARK 500 ALA B 162 -130.10 54.47
REMARK 500 ARG B 220 54.27 -151.33
REMARK 500 TYR B 222 -10.15 76.47
REMARK 500 ASP B 227 33.44 -140.32
REMARK 500 ALA B 267 -89.08 -140.08
REMARK 500 SER B 301 26.01 85.69
REMARK 500 LYS B 320 67.93 -109.72
REMARK 500 LEU B 335 -113.99 59.84
REMARK 500 PHE B 392 153.52 -48.25
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A1088 DISTANCE = 6.06 ANGSTROMS
REMARK 525 HOH A1089 DISTANCE = 6.11 ANGSTROMS
REMARK 525 HOH A1090 DISTANCE = 6.55 ANGSTROMS
REMARK 525 HOH A1091 DISTANCE = 7.18 ANGSTROMS
REMARK 525 HOH B1080 DISTANCE = 5.81 ANGSTROMS
REMARK 525 HOH B1081 DISTANCE = 5.89 ANGSTROMS
REMARK 525 HOH B1082 DISTANCE = 6.30 ANGSTROMS
REMARK 525 HOH B1083 DISTANCE = 6.60 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 501 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASN A 296 O
REMARK 620 2 ASN A 296 OD1 81.1
REMARK 620 3 SER A 297 O 67.6 77.0
REMARK 620 4 GLU A 342 OE1 149.7 81.2 84.5
REMARK 620 5 SER A 387 OG 89.8 93.6 156.4 115.8
REMARK 620 6 ASN A 388 O 99.2 172.3 95.9 95.2 94.1
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA B 501 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASN B 296 O
REMARK 620 2 ASN B 296 OD1 80.7
REMARK 620 3 GLU B 342 OE1 152.2 81.8
REMARK 620 4 SER B 387 OG 90.0 92.9 112.4
REMARK 620 5 ASN B 388 O 99.1 171.7 95.2 95.4
REMARK 620 N 1 2 3 4
DBREF1 7SQI A 1 405 UNP A0A6D2VX38_ECOLI
DBREF2 7SQI A A0A6D2VX38 1 405
DBREF1 7SQI B 1 405 UNP A0A6D2VX38_ECOLI
DBREF2 7SQI B A0A6D2VX38 1 405
DBREF 7SQI C 0 77 UNP B7MJ81 ACP_ECO45 1 78
DBREF 7SQI D 0 77 UNP B7MJ81 ACP_ECO45 1 78
SEQRES 1 A 405 MET LYS ARG ALA VAL ILE THR GLY LEU GLY ILE VAL SER
SEQRES 2 A 405 SER ILE GLY ASN ASN GLN GLN GLU VAL LEU ALA SER LEU
SEQRES 3 A 405 ARG GLU GLY ARG SER GLY ILE THR PHE SER GLN GLU LEU
SEQRES 4 A 405 LYS ASP SER GLY MET ARG SER HIS VAL TRP GLY ASN VAL
SEQRES 5 A 405 LYS LEU ASP THR THR GLY LEU ILE ASP ARG LYS VAL VAL
SEQRES 6 A 405 ARG PHE MET SER ASP ALA SER ILE TYR ALA PHE LEU SER
SEQRES 7 A 405 MET GLU GLN ALA ILE ALA ASP ALA GLY LEU SER PRO GLU
SEQRES 8 A 405 ALA TYR GLN ASN ASN PRO ARG VAL GLY LEU ILE ALA GLY
SEQRES 9 A 405 SER GLY GLY GLY SER PRO ARG PHE GLN VAL PHE GLY ALA
SEQRES 10 A 405 ASP ALA MET ARG GLY PRO ARG GLY LEU LYS ALA VAL GLY
SEQRES 11 A 405 PRO TYR VAL VAL THR LYS ALA MET ALA SER GLY VAL SER
SEQRES 12 A 405 ALA CYS LEU ALA THR PRO PHE LYS ILE HIS GLY VAL ASN
SEQRES 13 A 405 TYR SER ILE SER SER ALA CYS ALA THR SER ALA HIS CYS
SEQRES 14 A 405 ILE GLY ASN ALA VAL GLU GLN ILE GLN LEU GLY LYS GLN
SEQRES 15 A 405 ASP ILE VAL PHE ALA GLY GLY GLY GLU GLU LEU CYS TRP
SEQRES 16 A 405 GLU MET ALA CYS GLU PHE ASP ALA MET GLY ALA LEU SER
SEQRES 17 A 405 THR LYS TYR ASN ASP THR PRO GLU LYS ALA SER ARG THR
SEQRES 18 A 405 TYR ASP ALA HIS ARG ASP GLY PHE VAL ILE ALA GLY GLY
SEQRES 19 A 405 GLY GLY MET VAL VAL VAL GLU GLU LEU GLU HIS ALA LEU
SEQRES 20 A 405 ALA ARG GLY ALA HIS ILE TYR ALA GLU ILE VAL GLY TYR
SEQRES 21 A 405 GLY ALA THR SER ASP GLY ALA ASP MET VAL ALA PRO SER
SEQRES 22 A 405 GLY GLU GLY ALA VAL ARG CYS MET LYS MET ALA MET HIS
SEQRES 23 A 405 GLY VAL ASP THR PRO ILE ASP TYR LEU ASN SER HIS GLY
SEQRES 24 A 405 THR SER THR PRO VAL GLY ASP VAL LYS GLU LEU ALA ALA
SEQRES 25 A 405 ILE ARG GLU VAL PHE GLY ASP LYS SER PRO ALA ILE SER
SEQRES 26 A 405 ALA THR LYS ALA MET THR GLY HIS SER LEU GLY ALA ALA
SEQRES 27 A 405 GLY VAL GLN GLU ALA ILE TYR SER LEU LEU MET LEU GLU
SEQRES 28 A 405 HIS GLY PHE ILE ALA PRO SER ILE ASN ILE GLU GLU LEU
SEQRES 29 A 405 ASP GLU GLN ALA ALA GLY LEU ASN ILE VAL THR GLU THR
SEQRES 30 A 405 THR ASP ARG GLU LEU THR THR VAL MET SER ASN SER PHE
SEQRES 31 A 405 GLY PHE GLY GLY THR ASN ALA THR LEU VAL MET ARG LYS
SEQRES 32 A 405 LEU LYS
SEQRES 1 B 405 MET LYS ARG ALA VAL ILE THR GLY LEU GLY ILE VAL SER
SEQRES 2 B 405 SER ILE GLY ASN ASN GLN GLN GLU VAL LEU ALA SER LEU
SEQRES 3 B 405 ARG GLU GLY ARG SER GLY ILE THR PHE SER GLN GLU LEU
SEQRES 4 B 405 LYS ASP SER GLY MET ARG SER HIS VAL TRP GLY ASN VAL
SEQRES 5 B 405 LYS LEU ASP THR THR GLY LEU ILE ASP ARG LYS VAL VAL
SEQRES 6 B 405 ARG PHE MET SER ASP ALA SER ILE TYR ALA PHE LEU SER
SEQRES 7 B 405 MET GLU GLN ALA ILE ALA ASP ALA GLY LEU SER PRO GLU
SEQRES 8 B 405 ALA TYR GLN ASN ASN PRO ARG VAL GLY LEU ILE ALA GLY
SEQRES 9 B 405 SER GLY GLY GLY SER PRO ARG PHE GLN VAL PHE GLY ALA
SEQRES 10 B 405 ASP ALA MET ARG GLY PRO ARG GLY LEU LYS ALA VAL GLY
SEQRES 11 B 405 PRO TYR VAL VAL THR LYS ALA MET ALA SER GLY VAL SER
SEQRES 12 B 405 ALA CYS LEU ALA THR PRO PHE LYS ILE HIS GLY VAL ASN
SEQRES 13 B 405 TYR SER ILE SER SER ALA CYS ALA THR SER ALA HIS CYS
SEQRES 14 B 405 ILE GLY ASN ALA VAL GLU GLN ILE GLN LEU GLY LYS GLN
SEQRES 15 B 405 ASP ILE VAL PHE ALA GLY GLY GLY GLU GLU LEU CYS TRP
SEQRES 16 B 405 GLU MET ALA CYS GLU PHE ASP ALA MET GLY ALA LEU SER
SEQRES 17 B 405 THR LYS TYR ASN ASP THR PRO GLU LYS ALA SER ARG THR
SEQRES 18 B 405 TYR ASP ALA HIS ARG ASP GLY PHE VAL ILE ALA GLY GLY
SEQRES 19 B 405 GLY GLY MET VAL VAL VAL GLU GLU LEU GLU HIS ALA LEU
SEQRES 20 B 405 ALA ARG GLY ALA HIS ILE TYR ALA GLU ILE VAL GLY TYR
SEQRES 21 B 405 GLY ALA THR SER ASP GLY ALA ASP MET VAL ALA PRO SER
SEQRES 22 B 405 GLY GLU GLY ALA VAL ARG CYS MET LYS MET ALA MET HIS
SEQRES 23 B 405 GLY VAL ASP THR PRO ILE ASP TYR LEU ASN SER HIS GLY
SEQRES 24 B 405 THR SER THR PRO VAL GLY ASP VAL LYS GLU LEU ALA ALA
SEQRES 25 B 405 ILE ARG GLU VAL PHE GLY ASP LYS SER PRO ALA ILE SER
SEQRES 26 B 405 ALA THR LYS ALA MET THR GLY HIS SER LEU GLY ALA ALA
SEQRES 27 B 405 GLY VAL GLN GLU ALA ILE TYR SER LEU LEU MET LEU GLU
SEQRES 28 B 405 HIS GLY PHE ILE ALA PRO SER ILE ASN ILE GLU GLU LEU
SEQRES 29 B 405 ASP GLU GLN ALA ALA GLY LEU ASN ILE VAL THR GLU THR
SEQRES 30 B 405 THR ASP ARG GLU LEU THR THR VAL MET SER ASN SER PHE
SEQRES 31 B 405 GLY PHE GLY GLY THR ASN ALA THR LEU VAL MET ARG LYS
SEQRES 32 B 405 LEU LYS
SEQRES 1 C 78 MET SER THR ILE GLU GLU ARG VAL LYS LYS ILE ILE GLY
SEQRES 2 C 78 GLU GLN LEU GLY VAL LYS GLN GLU GLU VAL THR ASN ASN
SEQRES 3 C 78 ALA SER PHE VAL GLU ASP LEU GLY ALA ASP SER LEU ASP
SEQRES 4 C 78 THR VAL GLU LEU VAL MET ALA LEU GLU GLU GLU PHE ASP
SEQRES 5 C 78 THR GLU ILE PRO ASP GLU GLU ALA GLU LYS ILE THR THR
SEQRES 6 C 78 VAL GLN ALA ALA ILE ASP TYR ILE ASN GLY HIS GLN ALA
SEQRES 1 D 78 MET SER THR ILE GLU GLU ARG VAL LYS LYS ILE ILE GLY
SEQRES 2 D 78 GLU GLN LEU GLY VAL LYS GLN GLU GLU VAL THR ASN ASN
SEQRES 3 D 78 ALA SER PHE VAL GLU ASP LEU GLY ALA ASP SER LEU ASP
SEQRES 4 D 78 THR VAL GLU LEU VAL MET ALA LEU GLU GLU GLU PHE ASP
SEQRES 5 D 78 THR GLU ILE PRO ASP GLU GLU ALA GLU LYS ILE THR THR
SEQRES 6 D 78 VAL GLN ALA ALA ILE ASP TYR ILE ASN GLY HIS GLN ALA
HET NA A 501 1
HET NA B 501 1
HET A7V C 101 72
HET A7V D 101 72
HETNAM NA SODIUM ION
HETNAM A7V N-{2-[(2Z)-3-CHLOROTETRADEC-2-ENAMIDO]ETHYL}-N~3~-
HETNAM 2 A7V [(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)
HETNAM 3 A7V BUTANOYL]-BETA-ALANINAMIDE
FORMUL 5 NA 2(NA 1+)
FORMUL 7 A7V 2(C25 H47 CL N3 O8 P)
FORMUL 9 HOH *1069(H2 O)
HELIX 1 AA1 ASN A 18 GLY A 29 1 12
HELIX 2 AA2 SER A 36 SER A 42 1 7
HELIX 3 AA3 ASP A 61 ARG A 66 1 6
HELIX 4 AA4 SER A 69 GLY A 87 1 19
HELIX 5 AA5 SER A 89 GLN A 94 1 6
HELIX 6 AA6 SER A 109 GLY A 122 1 14
HELIX 7 AA7 GLY A 125 GLY A 130 1 6
HELIX 8 AA8 TYR A 132 MET A 138 1 7
HELIX 9 AA9 SER A 140 THR A 148 1 9
HELIX 10 AB1 SER A 161 CYS A 163 5 3
HELIX 11 AB2 ALA A 164 LEU A 179 1 16
HELIX 12 AB3 CYS A 194 ALA A 203 1 10
HELIX 13 AB4 THR A 214 ALA A 218 5 5
HELIX 14 AB5 LEU A 243 ARG A 249 1 7
HELIX 15 AB6 GLY A 274 HIS A 286 1 13
HELIX 16 AB7 VAL A 304 GLY A 318 1 15
HELIX 17 AB8 THR A 327 GLY A 332 1 6
HELIX 18 AB9 SER A 334 GLY A 336 5 3
HELIX 19 AC1 ALA A 337 GLY A 353 1 17
HELIX 20 AC2 ASP A 365 ALA A 369 5 5
HELIX 21 AC3 ASN B 18 GLY B 29 1 12
HELIX 22 AC4 SER B 36 GLY B 43 1 8
HELIX 23 AC5 ASP B 61 ARG B 66 1 6
HELIX 24 AC6 SER B 69 GLY B 87 1 19
HELIX 25 AC7 SER B 89 GLN B 94 1 6
HELIX 26 AC8 SER B 109 GLY B 122 1 14
HELIX 27 AC9 GLY B 125 GLY B 130 1 6
HELIX 28 AD1 TYR B 132 MET B 138 1 7
HELIX 29 AD2 SER B 140 THR B 148 1 9
HELIX 30 AD3 SER B 161 CYS B 163 5 3
HELIX 31 AD4 ALA B 164 LEU B 179 1 16
HELIX 32 AD5 CYS B 194 MET B 204 1 11
HELIX 33 AD6 THR B 214 ALA B 218 5 5
HELIX 34 AD7 LEU B 243 ARG B 249 1 7
HELIX 35 AD8 GLY B 274 HIS B 286 1 13
HELIX 36 AD9 THR B 302 GLY B 318 1 17
HELIX 37 AE1 THR B 327 GLY B 332 1 6
HELIX 38 AE2 SER B 334 GLY B 336 5 3
HELIX 39 AE3 ALA B 337 GLY B 353 1 17
HELIX 40 AE4 ASP B 365 ALA B 369 5 5
HELIX 41 AE5 ILE C 3 GLY C 16 1 14
HELIX 42 AE6 ASP C 35 PHE C 50 1 16
HELIX 43 AE7 PRO C 55 GLU C 60 1 6
HELIX 44 AE8 THR C 64 ASN C 73 1 10
HELIX 45 AE9 THR D 2 GLY D 16 1 15
HELIX 46 AF1 LYS D 18 VAL D 22 5 5
HELIX 47 AF2 ASP D 35 PHE D 50 1 16
HELIX 48 AF3 PRO D 55 ILE D 62 1 8
HELIX 49 AF4 THR D 64 HIS D 75 1 12
SHEET 1 AA121 ALA A 323 SER A 325 0
SHEET 2 AA121 TYR A 294 ASN A 296 1 N LEU A 295 O ALA A 323
SHEET 3 AA121 THR A 384 GLY A 391 1 O MET A 386 N ASN A 296
SHEET 4 AA121 THR A 395 ARG A 402 -1 O MET A 401 N VAL A 385
SHEET 5 AA121 ALA A 255 SER A 264 -1 N GLU A 256 O ARG A 402
SHEET 6 AA121 ALA A 4 VAL A 12 -1 N ILE A 6 O ALA A 255
SHEET 7 AA121 GLY A 234 GLU A 242 -1 O GLU A 241 N VAL A 5
SHEET 8 AA121 ILE A 184 GLU A 191 -1 N ALA A 187 O VAL A 238
SHEET 9 AA121 VAL A 99 GLY A 104 1 N ILE A 102 O PHE A 186
SHEET 10 AA121 ASN A 156 SER A 160 1 O TYR A 157 N LEU A 101
SHEET 11 AA121 ASN B 156 SER B 160 -1 O SER B 160 N SER A 158
SHEET 12 AA121 VAL B 99 GLY B 104 1 N LEU B 101 O TYR B 157
SHEET 13 AA121 ILE B 184 GLU B 191 1 O PHE B 186 N GLY B 100
SHEET 14 AA121 GLY B 234 GLU B 242 -1 O VAL B 240 N VAL B 185
SHEET 15 AA121 ALA B 4 VAL B 12 -1 N VAL B 5 O GLU B 241
SHEET 16 AA121 ALA B 255 SER B 264 -1 O ALA B 255 N ILE B 6
SHEET 17 AA121 THR B 395 ARG B 402 -1 O ARG B 402 N GLU B 256
SHEET 18 AA121 THR B 384 GLY B 391 -1 N VAL B 385 O MET B 401
SHEET 19 AA121 TYR B 294 ASN B 296 1 N ASN B 296 O MET B 386
SHEET 20 AA121 ALA B 323 SER B 325 1 O ALA B 323 N LEU B 295
SHEET 21 AA121 ASN B 372 ILE B 373 1 O ASN B 372 N ILE B 324
SHEET 1 AA2 2 ILE A 33 PHE A 35 0
SHEET 2 AA2 2 VAL A 48 GLY A 50 -1 O TRP A 49 N THR A 34
SHEET 1 AA3 2 PHE A 354 ILE A 355 0
SHEET 2 AA3 2 THR A 378 ASP A 379 -1 O THR A 378 N ILE A 355
SHEET 1 AA4 2 ILE B 33 PHE B 35 0
SHEET 2 AA4 2 VAL B 48 GLY B 50 -1 O TRP B 49 N THR B 34
SHEET 1 AA5 2 PHE B 354 ILE B 355 0
SHEET 2 AA5 2 THR B 378 ASP B 379 -1 O THR B 378 N ILE B 355
LINK SG ACYS A 163 C14AA7V D 101 1555 1555 1.90
LINK SG BCYS A 163 C14BA7V D 101 1555 1555 1.94
LINK SG ACYS B 163 C14AA7V C 101 1555 1555 1.84
LINK OG ASER C 36 P01AA7V C 101 1555 1555 1.63
LINK OG BSER C 36 P01BA7V C 101 1555 1555 1.61
LINK OG ASER D 36 P01AA7V D 101 1555 1555 1.63
LINK OG BSER D 36 P01BA7V D 101 1555 1555 1.61
LINK O ASN A 296 NA NA A 501 1555 1555 2.62
LINK OD1 ASN A 296 NA NA A 501 1555 1555 2.37
LINK O SER A 297 NA NA A 501 1555 1555 3.19
LINK OE1 GLU A 342 NA NA A 501 1555 1555 2.38
LINK OG SER A 387 NA NA A 501 1555 1555 2.61
LINK O ASN A 388 NA NA A 501 1555 1555 2.64
LINK O ASN B 296 NA NA B 501 1555 1555 2.58
LINK OD1 ASN B 296 NA NA B 501 1555 1555 2.33
LINK OE1 GLU B 342 NA NA B 501 1555 1555 2.30
LINK OG SER B 387 NA NA B 501 1555 1555 2.59
LINK O ASN B 388 NA NA B 501 1555 1555 2.64
CRYST1 58.990 112.380 141.640 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016952 0.000000 0.000000 0.00000
SCALE2 0.000000 0.008898 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007060 0.00000