HEADER ANTIVIRAL PROTEIN 25-NOV-21 7SZ3 TITLE MOUSE PARP13/ZAP ZNF5-WWE1-WWE2 BOUND TO ADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER CCCH-TYPE ANTIVIRAL PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 13,ARTD13, COMPND 5 INACTIVE POLY [ADP-RIBOSE] POLYMERASE 13,PARP13; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ZC3HAV1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PARP13, ZAP, WWE, ADPR, POLY-ADPRIBOSE, ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.R.AYANATH KUTTIYATVEETIL,J.M.PASCAL REVDAT 3 22-MAY-24 7SZ3 1 REMARK REVDAT 2 09-NOV-22 7SZ3 1 JRNL REVDAT 1 05-OCT-22 7SZ3 0 JRNL AUTH J.R.A.KUTTIYATVEETIL,H.SOUFARI,M.DASOVICH,I.R.URIBE, JRNL AUTH 2 M.MIRHASAN,S.J.CHENG,A.K.L.LEUNG,J.M.PASCAL JRNL TITL CRYSTAL STRUCTURES AND FUNCTIONAL ANALYSIS OF THE JRNL TITL 2 ZNF5-WWE1-WWE2 REGION OF PARP13/ZAP DEFINE A DISTINCTIVE JRNL TITL 3 MODE OF ENGAGING POLY(ADP-RIBOSE). JRNL REF CELL REP V. 41 11529 2022 JRNL REFN ESSN 2211-1247 JRNL PMID 36288691 JRNL DOI 10.1016/J.CELREP.2022.111529 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2605 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1915 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3800 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 119 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.18000 REMARK 3 B22 (A**2) : 1.18000 REMARK 3 B33 (A**2) : -3.84000 REMARK 3 B12 (A**2) : 0.59000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.211 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.182 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.442 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3205 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2825 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4356 ; 1.528 ; 1.652 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6502 ; 1.226 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 352 ; 8.044 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;32.427 ;21.204 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 523 ;15.241 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;20.593 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 409 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3508 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 820 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 485 666 B 485 666 5562 0.110 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 485 A 705 REMARK 3 ORIGIN FOR THE GROUP (A): 9.3276 64.4911 43.8876 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.0137 REMARK 3 T33: 0.2021 T12: 0.0010 REMARK 3 T13: 0.0098 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.1748 L22: 1.8799 REMARK 3 L33: 4.8430 L12: 0.1775 REMARK 3 L13: 0.7980 L23: 0.0025 REMARK 3 S TENSOR REMARK 3 S11: -0.0899 S12: 0.0081 S13: 0.0852 REMARK 3 S21: -0.1500 S22: 0.0961 S23: 0.2845 REMARK 3 S31: -0.4733 S32: -0.0080 S33: -0.0062 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 486 B 701 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8855 47.2737 52.2587 REMARK 3 T TENSOR REMARK 3 T11: 0.0041 T22: 0.0385 REMARK 3 T33: 0.1075 T12: 0.0045 REMARK 3 T13: -0.0043 T23: -0.0521 REMARK 3 L TENSOR REMARK 3 L11: 0.5654 L22: 1.1147 REMARK 3 L33: 4.4633 L12: -0.3012 REMARK 3 L13: 0.8347 L23: 0.1813 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: 0.1221 S13: -0.1158 REMARK 3 S21: 0.0178 S22: 0.0180 S23: -0.0301 REMARK 3 S31: 0.1238 S32: 0.1729 S33: -0.0319 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7SZ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1000261338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.18057 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29530 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.90 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 22.40 REMARK 200 R MERGE FOR SHELL (I) : 2.27000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M NA/K PHOSPHATE PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.91367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.82733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.82733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.91367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 830 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 476 REMARK 465 PRO A 477 REMARK 465 ARG A 478 REMARK 465 MET A 479 REMARK 465 ASP A 480 REMARK 465 ASP A 481 REMARK 465 HIS A 482 REMARK 465 GLY A 483 REMARK 465 LEU A 484 REMARK 465 GLN A 498 REMARK 465 VAL A 499 REMARK 465 ASN A 500 REMARK 465 CYS A 501 REMARK 465 ASN A 502 REMARK 465 LYS A 503 REMARK 465 ASN A 504 REMARK 465 HIS A 505 REMARK 465 LYS A 668 REMARK 465 ARG A 669 REMARK 465 ARG A 670 REMARK 465 GLY A 671 REMARK 465 PRO A 672 REMARK 465 ASP A 673 REMARK 465 SER B 476 REMARK 465 PRO B 477 REMARK 465 ARG B 478 REMARK 465 MET B 479 REMARK 465 ASP B 480 REMARK 465 ASP B 481 REMARK 465 HIS B 482 REMARK 465 GLY B 483 REMARK 465 LEU B 484 REMARK 465 GLN B 498 REMARK 465 VAL B 499 REMARK 465 ASN B 500 REMARK 465 CYS B 501 REMARK 465 ASN B 502 REMARK 465 LYS B 503 REMARK 465 ASN B 504 REMARK 465 GLY B 671 REMARK 465 PRO B 672 REMARK 465 ASP B 673 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 485 CG CD CE NZ REMARK 470 GLN A 667 CG CD OE1 NE2 REMARK 470 LYS B 485 CG CD CE NZ REMARK 470 HIS B 505 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 GOL A 703 O HOH A 801 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 857 O HOH B 860 4556 2.14 REMARK 500 OD2 ASP A 556 OE2 GLU A 606 5675 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 517 122.78 -35.60 REMARK 500 ASP A 525 38.58 71.25 REMARK 500 SER A 557 -6.55 81.69 REMARK 500 CYS A 619 77.48 -150.77 REMARK 500 GLU B 544 -116.69 60.74 REMARK 500 SER B 557 -9.56 84.87 REMARK 500 LYS B 648 1.92 80.01 REMARK 500 ARG B 669 53.60 -92.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 7SZ3 A 476 673 UNP Q3UPF5 ZCCHV_MOUSE 592 789 DBREF 7SZ3 B 476 673 UNP Q3UPF5 ZCCHV_MOUSE 592 789 SEQRES 1 A 198 SER PRO ARG MET ASP ASP HIS GLY LEU LYS GLU ILE CYS SEQRES 2 A 198 LEU ASP HIS LEU TYR ARG GLY CYS GLN GLN VAL ASN CYS SEQRES 3 A 198 ASN LYS ASN HIS PHE HIS LEU PRO TYR ARG TRP GLN LEU SEQRES 4 A 198 PHE ILE LEU PRO THR TRP MET ASP PHE GLN ASP MET GLU SEQRES 5 A 198 TYR ILE GLU ARG ALA TYR CYS ASP PRO GLN ILE GLU ILE SEQRES 6 A 198 ILE VAL ILE GLU LYS HIS ARG ILE ASN PHE LYS LYS MET SEQRES 7 A 198 THR CYS ASP SER TYR PRO ILE ARG ARG LEU SER THR PRO SEQRES 8 A 198 SER PHE VAL GLU LYS THR LEU ASN SER VAL PHE THR THR SEQRES 9 A 198 LYS TRP LEU TRP TYR TRP ARG ASN GLU LEU ASN GLU TYR SEQRES 10 A 198 THR GLN TYR GLY HIS GLU SER PRO SER HIS THR SER SER SEQRES 11 A 198 GLU ILE ASN SER ALA TYR LEU GLU SER PHE PHE HIS SER SEQRES 12 A 198 CYS PRO ARG GLY VAL LEU GLN PHE HIS ALA GLY SER GLN SEQRES 13 A 198 ASN TYR GLU LEU SER PHE GLN GLY MET ILE GLN THR ASN SEQRES 14 A 198 ILE ALA SER LYS THR GLN ARG HIS VAL VAL ARG ARG PRO SEQRES 15 A 198 VAL PHE VAL SER SER LYS ASP VAL GLU GLN LYS ARG ARG SEQRES 16 A 198 GLY PRO ASP SEQRES 1 B 198 SER PRO ARG MET ASP ASP HIS GLY LEU LYS GLU ILE CYS SEQRES 2 B 198 LEU ASP HIS LEU TYR ARG GLY CYS GLN GLN VAL ASN CYS SEQRES 3 B 198 ASN LYS ASN HIS PHE HIS LEU PRO TYR ARG TRP GLN LEU SEQRES 4 B 198 PHE ILE LEU PRO THR TRP MET ASP PHE GLN ASP MET GLU SEQRES 5 B 198 TYR ILE GLU ARG ALA TYR CYS ASP PRO GLN ILE GLU ILE SEQRES 6 B 198 ILE VAL ILE GLU LYS HIS ARG ILE ASN PHE LYS LYS MET SEQRES 7 B 198 THR CYS ASP SER TYR PRO ILE ARG ARG LEU SER THR PRO SEQRES 8 B 198 SER PHE VAL GLU LYS THR LEU ASN SER VAL PHE THR THR SEQRES 9 B 198 LYS TRP LEU TRP TYR TRP ARG ASN GLU LEU ASN GLU TYR SEQRES 10 B 198 THR GLN TYR GLY HIS GLU SER PRO SER HIS THR SER SER SEQRES 11 B 198 GLU ILE ASN SER ALA TYR LEU GLU SER PHE PHE HIS SER SEQRES 12 B 198 CYS PRO ARG GLY VAL LEU GLN PHE HIS ALA GLY SER GLN SEQRES 13 B 198 ASN TYR GLU LEU SER PHE GLN GLY MET ILE GLN THR ASN SEQRES 14 B 198 ILE ALA SER LYS THR GLN ARG HIS VAL VAL ARG ARG PRO SEQRES 15 B 198 VAL PHE VAL SER SER LYS ASP VAL GLU GLN LYS ARG ARG SEQRES 16 B 198 GLY PRO ASP HET GOL A 701 6 HET APR A 702 36 HET GOL A 703 6 HET PO4 A 704 5 HET PO4 A 705 5 HET PO4 A 706 5 HET APR B 701 36 HET PO4 B 702 5 HET PO4 B 703 5 HET PO4 B 704 5 HET PO4 B 705 5 HETNAM GOL GLYCEROL HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 APR 2(C15 H23 N5 O14 P2) FORMUL 6 PO4 7(O4 P 3-) FORMUL 14 HOH *113(H2 O) HELIX 1 AA1 ASP A 525 CYS A 534 1 10 HELIX 2 AA2 ASN A 574 THR A 578 5 5 HELIX 3 AA3 ASN A 608 CYS A 619 1 12 HELIX 4 AA4 SER A 661 GLN A 667 1 7 HELIX 5 AA5 ASP B 525 CYS B 534 1 10 HELIX 6 AA6 ASN B 574 THR B 578 5 5 HELIX 7 AA7 ASN B 608 CYS B 619 1 12 HELIX 8 AA8 SER B 661 LYS B 668 1 8 SHEET 1 AA1 6 GLY A 495 CYS A 496 0 SHEET 2 AA1 6 GLU A 486 LEU A 489 -1 N CYS A 488 O CYS A 496 SHEET 3 AA1 6 PHE A 568 GLU A 570 -1 O PHE A 568 N ILE A 487 SHEET 4 AA1 6 PHE B 568 GLU B 570 -1 O VAL B 569 N VAL A 569 SHEET 5 AA1 6 GLU B 486 LEU B 489 -1 N ILE B 487 O PHE B 568 SHEET 6 AA1 6 GLY B 495 CYS B 496 -1 O CYS B 496 N CYS B 488 SHEET 1 AA2 6 THR A 519 ASP A 522 0 SHEET 2 AA2 6 TYR A 510 ILE A 516 -1 N LEU A 514 O MET A 521 SHEET 3 AA2 6 TYR A 558 SER A 564 -1 O LEU A 563 N ARG A 511 SHEET 4 AA2 6 THR A 554 CYS A 555 -1 N CYS A 555 O TYR A 558 SHEET 5 AA2 6 HIS A 546 ASN A 549 -1 N ASN A 549 O THR A 554 SHEET 6 AA2 6 ILE A 540 ILE A 543 -1 N ILE A 541 O ILE A 548 SHEET 1 AA3 6 TYR A 592 GLN A 594 0 SHEET 2 AA3 6 TRP A 581 ARG A 586 -1 N TRP A 585 O THR A 593 SHEET 3 AA3 6 GLN A 650 PRO A 657 -1 O ARG A 656 N LEU A 582 SHEET 4 AA3 6 ILE A 641 ASN A 644 -1 N GLN A 642 O ARG A 651 SHEET 5 AA3 6 GLN A 631 SER A 636 -1 N GLU A 634 O THR A 643 SHEET 6 AA3 6 VAL A 623 ALA A 628 -1 N LEU A 624 O LEU A 635 SHEET 1 AA4 6 THR B 519 ASP B 522 0 SHEET 2 AA4 6 TYR B 510 ILE B 516 -1 N LEU B 514 O MET B 521 SHEET 3 AA4 6 TYR B 558 SER B 564 -1 O LEU B 563 N ARG B 511 SHEET 4 AA4 6 THR B 554 CYS B 555 -1 N CYS B 555 O TYR B 558 SHEET 5 AA4 6 HIS B 546 ASN B 549 -1 N ASN B 549 O THR B 554 SHEET 6 AA4 6 ILE B 540 ILE B 543 -1 N ILE B 541 O ILE B 548 SHEET 1 AA5 6 TYR B 592 GLN B 594 0 SHEET 2 AA5 6 TRP B 581 ARG B 586 -1 N TRP B 585 O THR B 593 SHEET 3 AA5 6 GLN B 650 PRO B 657 -1 O ARG B 656 N LEU B 582 SHEET 4 AA5 6 ILE B 641 ASN B 644 -1 N GLN B 642 O ARG B 651 SHEET 5 AA5 6 GLN B 631 SER B 636 -1 N GLU B 634 O THR B 643 SHEET 6 AA5 6 VAL B 623 ALA B 628 -1 N LEU B 624 O LEU B 635 CISPEP 1 LEU A 517 PRO A 518 0 7.70 CISPEP 2 LEU B 517 PRO B 518 0 4.02 CRYST1 87.415 87.415 128.741 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011440 0.006605 0.000000 0.00000 SCALE2 0.000000 0.013209 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007768 0.00000