HEADER OXIDOREDUCTASE 29-NOV-21 7SZV TITLE CRYSTAL STRUCTURE OF ACYL-COA DEHYDROGENASE FROM MYCOBACTERIUM MARINUM TITLE 2 IN COMPLEX WITH FDA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-COA DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MYMAA.01263.B.A1; COMPND 5 EC: 1.3.99.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM MARINUM; SOURCE 3 ORGANISM_TAXID: 1781; SOURCE 4 GENE: MMGC_16, DAVIS_02721; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ATCC BAA-535 / M; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MYMAA.01263.B.A1 KEYWDS SSGCID, OXIDOREDUCTASE, FAD, FLAVOPROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 7SZV 1 REMARK REVDAT 1 22-DEC-21 7SZV 0 JRNL AUTH N.D.DEBOUVER,J.ABENDROTH,C.D.SROGE,D.D.LORIMER,P.S.HORANYI, JRNL AUTH 2 T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF ACYL-COA DEHYDROGENASE FROM JRNL TITL 2 MYCOBACTERIUM MARINUM IN COMPLEX WITH FDA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20-4438 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30205 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.530 REMARK 3 FREE R VALUE TEST SET COUNT : 1973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8200 - 5.7800 1.00 2068 143 0.1554 0.1821 REMARK 3 2 5.7800 - 4.5900 1.00 2030 151 0.1597 0.2134 REMARK 3 3 4.5900 - 4.0100 1.00 2019 127 0.1432 0.1772 REMARK 3 4 4.0100 - 3.6400 1.00 2014 149 0.1704 0.1937 REMARK 3 5 3.6400 - 3.3800 1.00 2028 133 0.1846 0.2231 REMARK 3 6 3.3800 - 3.1800 1.00 2008 143 0.2210 0.2694 REMARK 3 7 3.1800 - 3.0200 1.00 2037 136 0.2073 0.2401 REMARK 3 8 3.0200 - 2.8900 1.00 2032 106 0.2240 0.2342 REMARK 3 9 2.8900 - 2.7800 1.00 1999 150 0.2114 0.2484 REMARK 3 10 2.7800 - 2.6800 1.00 2019 133 0.2385 0.2863 REMARK 3 11 2.6800 - 2.6000 1.00 2000 161 0.2174 0.2904 REMARK 3 12 2.6000 - 2.5300 1.00 1995 149 0.2227 0.2442 REMARK 3 13 2.5300 - 2.4600 1.00 1980 137 0.2141 0.2645 REMARK 3 14 2.4600 - 2.4000 1.00 2003 155 0.2326 0.2940 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2629 -40.4508 -10.9175 REMARK 3 T TENSOR REMARK 3 T11: 0.4652 T22: 0.7763 REMARK 3 T33: 0.6373 T12: 0.0629 REMARK 3 T13: 0.0961 T23: 0.1745 REMARK 3 L TENSOR REMARK 3 L11: 1.2112 L22: 3.0655 REMARK 3 L33: 3.8351 L12: -0.6198 REMARK 3 L13: -0.7338 L23: -0.7655 REMARK 3 S TENSOR REMARK 3 S11: -0.1122 S12: 0.4276 S13: -0.2186 REMARK 3 S21: -0.4971 S22: -0.2896 S23: -0.6194 REMARK 3 S31: -0.0138 S32: 0.8665 S33: 0.3942 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5903 -28.3348 -13.3380 REMARK 3 T TENSOR REMARK 3 T11: 0.6364 T22: 0.7972 REMARK 3 T33: 0.4271 T12: 0.1350 REMARK 3 T13: 0.0455 T23: 0.2507 REMARK 3 L TENSOR REMARK 3 L11: 1.5146 L22: 3.7059 REMARK 3 L33: 4.0154 L12: 0.0297 REMARK 3 L13: 0.6177 L23: -1.4706 REMARK 3 S TENSOR REMARK 3 S11: 0.0473 S12: 0.7252 S13: 0.4887 REMARK 3 S21: -0.2550 S22: -0.3861 S23: -0.3040 REMARK 3 S31: -0.8409 S32: -0.1877 S33: 0.2160 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5658 -16.7109 -4.5800 REMARK 3 T TENSOR REMARK 3 T11: 1.0575 T22: 0.5892 REMARK 3 T33: 0.8184 T12: 0.1363 REMARK 3 T13: -0.0354 T23: 0.3003 REMARK 3 L TENSOR REMARK 3 L11: 2.5874 L22: 3.1549 REMARK 3 L33: 2.1594 L12: -0.5936 REMARK 3 L13: 0.3410 L23: -1.4974 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.4564 S13: 1.1509 REMARK 3 S21: 0.0871 S22: -0.1457 S23: -0.4003 REMARK 3 S31: -1.4247 S32: 0.0200 S33: 0.3416 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0671 -47.7988 0.1125 REMARK 3 T TENSOR REMARK 3 T11: 0.3220 T22: 0.4610 REMARK 3 T33: 0.3596 T12: 0.0946 REMARK 3 T13: 0.0530 T23: 0.0842 REMARK 3 L TENSOR REMARK 3 L11: 2.3854 L22: 2.1675 REMARK 3 L33: 3.2187 L12: 1.3348 REMARK 3 L13: -0.0744 L23: 0.8159 REMARK 3 S TENSOR REMARK 3 S11: -0.2552 S12: 0.1585 S13: -0.2042 REMARK 3 S21: -0.1199 S22: -0.0217 S23: -0.2832 REMARK 3 S31: -0.0699 S32: 0.2575 S33: 0.1904 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7325 -46.0081 31.4119 REMARK 3 T TENSOR REMARK 3 T11: 0.5823 T22: 1.1863 REMARK 3 T33: 0.9626 T12: -0.1248 REMARK 3 T13: -0.4087 T23: 0.4870 REMARK 3 L TENSOR REMARK 3 L11: 1.3685 L22: 0.9683 REMARK 3 L33: 1.6170 L12: 1.0334 REMARK 3 L13: 0.5525 L23: -0.0724 REMARK 3 S TENSOR REMARK 3 S11: 0.4697 S12: -0.9659 S13: -0.7327 REMARK 3 S21: 0.7149 S22: -0.8217 S23: -0.9715 REMARK 3 S31: -0.0156 S32: 0.6455 S33: 0.2716 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2221 -45.5110 22.2941 REMARK 3 T TENSOR REMARK 3 T11: 0.4002 T22: 0.5955 REMARK 3 T33: 0.3571 T12: 0.0560 REMARK 3 T13: -0.0537 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 2.9512 L22: 1.6406 REMARK 3 L33: 1.9751 L12: 2.0823 REMARK 3 L13: -0.0816 L23: 0.5021 REMARK 3 S TENSOR REMARK 3 S11: 0.1593 S12: -0.5014 S13: 0.1179 REMARK 3 S21: 0.3316 S22: -0.4213 S23: -0.1406 REMARK 3 S31: -0.1397 S32: 0.1028 S33: 0.1477 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 9 THROUGH 12 OR REMARK 3 (RESID 13 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 14 REMARK 3 THROUGH 17 OR (RESID 18 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 19 THROUGH 53 OR RESID 55 REMARK 3 THROUGH 62 OR RESID 64 THROUGH 104 OR REMARK 3 (RESID 105 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 106 REMARK 3 THROUGH 111 OR (RESID 112 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 113 OR (RESID 114 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 116 THROUGH 146 OR (RESID 147 REMARK 3 THROUGH 148 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 149 THROUGH 154 OR (RESID 155 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 156 THROUGH 179 OR (RESID 188 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 189 THROUGH 222 REMARK 3 OR (RESID 223 THROUGH 225 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 226 THROUGH 231 OR (RESID 232 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 233 THROUGH 316 REMARK 3 OR (RESID 317 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 318 THROUGH 386 OR RESID 480)) REMARK 3 SELECTION : (CHAIN B AND (RESID 9 THROUGH 34 OR REMARK 3 (RESID 35 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 36 REMARK 3 THROUGH 51 OR (RESID 52 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 53 OR RESID 55 THROUGH 62 OR REMARK 3 RESID 64 THROUGH 108 OR (RESID 109 REMARK 3 THROUGH 110 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 111 THROUGH 114 OR RESID 116 THROUGH 269 REMARK 3 OR (RESID 270 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 271 THROUGH 273 OR (RESID 274 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 275 THROUGH 279 OR (RESID 280 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 281 THROUGH 352 REMARK 3 OR (RESID 353 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 354 THROUGH 381 OR (RESID 382 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 383 THROUGH 386 OR RESID 480)) REMARK 3 ATOM PAIRS NUMBER : 3286 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SZV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1000261411. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30213 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 42.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.915 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.94 REMARK 200 R MERGE FOR SHELL (I) : 0.53900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 5OL2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: [BARCODE: 320192B12] [PIN_ID: GHD0-3] REMARK 280 [COLLECTION: APS21IDF 3/25/2021] [CRYSTALLIZATION CONDITIONS: REMARK 280 MCSG1 B12 - 0.1M BIS-TRIS:HCL, PH 6.5, 28% (W/V) PEG 2000 MME] REMARK 280 [CRYO: 20% EG], VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.32000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.64000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.32000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.64000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -60.07000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -104.04429 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 GLY A 179A REMARK 465 SER A 179B REMARK 465 ILE A 179C REMARK 465 ALA A 179D REMARK 465 ASP A 179E REMARK 465 GLY A 179F REMARK 465 LYS A 179G REMARK 465 SER A 387 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 ILE B 5 REMARK 465 SER B 6 REMARK 465 ALA B 7 REMARK 465 GLY B 8 REMARK 465 GLY B 179A REMARK 465 SER B 179B REMARK 465 ILE B 179C REMARK 465 ALA B 179D REMARK 465 ASP B 179E REMARK 465 GLY B 179F REMARK 465 LYS B 179G REMARK 465 LYS B 179H REMARK 465 GLU B 179I REMARK 465 SER B 387 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 9 OG1 CG2 REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 ASP A 138 CG OD1 OD2 REMARK 470 ARG A 143 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 154 CG1 CG2 REMARK 470 VAL A 178 CG1 CG2 REMARK 470 LYS A 186 CG CD CE NZ REMARK 470 GLU A 187 CG CD OE1 OE2 REMARK 470 ASP A 222 CG OD1 OD2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 228 CG CD OE1 OE2 REMARK 470 GLU A 229 CG CD OE1 OE2 REMARK 470 ARG A 235 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 GLU A 274 CG CD OE1 OE2 REMARK 470 GLN A 280 CG CD OE1 NE2 REMARK 470 GLU A 353 CG CD OE1 OE2 REMARK 470 ARG A 382 CG CD NE CZ NH1 NH2 REMARK 470 THR B 9 OG1 CG2 REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 ARG B 18 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 105 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 ASP B 138 CG OD1 OD2 REMARK 470 ARG B 143 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 147 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 148 CG CD1 CD2 REMARK 470 VAL B 154 CG1 CG2 REMARK 470 VAL B 155 CG1 CG2 REMARK 470 VAL B 178 CG1 CG2 REMARK 470 ILE B 188 CG1 CG2 CD1 REMARK 470 ASP B 222 CG OD1 OD2 REMARK 470 ASP B 223 CG OD1 OD2 REMARK 470 ARG B 225 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 228 CG CD OE1 OE2 REMARK 470 GLU B 229 CG CD OE1 OE2 REMARK 470 LEU B 232 CG CD1 CD2 REMARK 470 ARG B 235 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 LYS B 317 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 137 13.72 54.39 REMARK 500 PHE A 319 10.90 -142.00 REMARK 500 SER B 137 13.46 53.21 REMARK 500 ASN B 352 -9.12 -59.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MYMAA.01263.B.A1 RELATED DB: TARGETTRACK DBREF1 7SZV A 1 387 UNP A0A3E2MWC7_MYCMR DBREF2 7SZV A A0A3E2MWC7 1 388 DBREF1 7SZV B 1 387 UNP A0A3E2MWC7_MYCMR DBREF2 7SZV B A0A3E2MWC7 1 388 SEQADV 7SZV ILE A 292 UNP A0A3E2MWC VAL 293 ENGINEERED MUTATION SEQADV 7SZV ILE B 292 UNP A0A3E2MWC VAL 293 ENGINEERED MUTATION SEQRES 1 A 388 MET THR THR ALA ILE SER ALA GLY THR LEU PRO LYS GLU SEQRES 2 A 388 TYR GLN ASP LEU ARG ASP THR VAL ALA ASP PHE ALA ARG SEQRES 3 A 388 SER VAL VAL ALA PRO VAL SER ALA LYS HIS ASP GLU GLU SEQRES 4 A 388 HIS SER PHE PRO TYR GLU VAL VAL ALA LYS MET GLY GLU SEQRES 5 A 388 MET GLY LEU PHE GLY LEU PRO PHE PRO GLU GLU TYR GLY SEQRES 6 A 388 GLY MET GLY GLY ASP TYR PHE ALA LEU ALA LEU ALA LEU SEQRES 7 A 388 GLU GLU LEU GLY LYS VAL ASP GLN SER VAL ALA ILE THR SEQRES 8 A 388 LEU GLU ALA GLY VAL GLY LEU GLY ALA MET PRO ILE TYR SEQRES 9 A 388 ARG PHE GLY ASN GLU GLU GLN LYS SER LYS TRP LEU PRO SEQRES 10 A 388 ASP LEU LEU ALA GLY ARG ALA LEU ALA GLY PHE GLY LEU SEQRES 11 A 388 THR GLU PRO GLY ALA GLY SER ASP ALA GLY SER THR ARG SEQRES 12 A 388 THR THR ALA ARG LEU ASP GLY GLY GLU TRP VAL VAL ASN SEQRES 13 A 388 GLY SER LYS GLN PHE ILE THR ASN SER GLY THR ASP ILE SEQRES 14 A 388 THR SER LEU VAL THR ILE THR ALA VAL THR GLY SER ILE SEQRES 15 A 388 ALA ASP GLY LYS LYS GLU ILE SER THR ILE ILE VAL PRO SEQRES 16 A 388 SER GLY THR PRO GLY PHE ILE VAL GLU PRO VAL TYR ASN SEQRES 17 A 388 LYS VAL GLY TRP ASN ALA SER ASP THR HIS PRO LEU SER SEQRES 18 A 388 PHE ASP ASP ALA ARG VAL PRO GLU GLU ASN LEU LEU GLY SEQRES 19 A 388 ILE ARG GLY LYS GLY TYR ALA ASN PHE LEU SER ILE LEU SEQRES 20 A 388 ASP GLU GLY ARG ILE ALA ILE ALA ALA LEU ALA THR GLY SEQRES 21 A 388 VAL ALA GLN GLY CYS VAL ASP GLU SER VAL LYS TYR ALA SEQRES 22 A 388 LYS GLU ARG GLN SER PHE GLY GLN PRO ILE GLY SER TYR SEQRES 23 A 388 GLN ALA ILE SER PHE LYS ILE ALA ARG MET GLU ALA ARG SEQRES 24 A 388 ALA HIS VAL ALA ARG THR ALA TYR TYR GLU ALA ALA ALA SEQRES 25 A 388 LYS MET LEU ALA GLY LYS PRO PHE LYS LYS GLU ALA ALA SEQRES 26 A 388 ILE ALA LYS MET ILE SER SER GLU ALA ALA MET ASP ASN SEQRES 27 A 388 ALA ARG ASP ALA THR GLN VAL HIS GLY GLY TYR GLY PHE SEQRES 28 A 388 MET ASN GLU TYR PRO VAL ALA ARG HIS TYR ARG ASP SER SEQRES 29 A 388 LYS ILE LEU GLU ILE GLY GLU GLY THR THR GLU VAL GLN SEQRES 30 A 388 LEU MET LEU ILE ALA ARG SER LEU GLY LEU SER SEQRES 1 B 388 MET THR THR ALA ILE SER ALA GLY THR LEU PRO LYS GLU SEQRES 2 B 388 TYR GLN ASP LEU ARG ASP THR VAL ALA ASP PHE ALA ARG SEQRES 3 B 388 SER VAL VAL ALA PRO VAL SER ALA LYS HIS ASP GLU GLU SEQRES 4 B 388 HIS SER PHE PRO TYR GLU VAL VAL ALA LYS MET GLY GLU SEQRES 5 B 388 MET GLY LEU PHE GLY LEU PRO PHE PRO GLU GLU TYR GLY SEQRES 6 B 388 GLY MET GLY GLY ASP TYR PHE ALA LEU ALA LEU ALA LEU SEQRES 7 B 388 GLU GLU LEU GLY LYS VAL ASP GLN SER VAL ALA ILE THR SEQRES 8 B 388 LEU GLU ALA GLY VAL GLY LEU GLY ALA MET PRO ILE TYR SEQRES 9 B 388 ARG PHE GLY ASN GLU GLU GLN LYS SER LYS TRP LEU PRO SEQRES 10 B 388 ASP LEU LEU ALA GLY ARG ALA LEU ALA GLY PHE GLY LEU SEQRES 11 B 388 THR GLU PRO GLY ALA GLY SER ASP ALA GLY SER THR ARG SEQRES 12 B 388 THR THR ALA ARG LEU ASP GLY GLY GLU TRP VAL VAL ASN SEQRES 13 B 388 GLY SER LYS GLN PHE ILE THR ASN SER GLY THR ASP ILE SEQRES 14 B 388 THR SER LEU VAL THR ILE THR ALA VAL THR GLY SER ILE SEQRES 15 B 388 ALA ASP GLY LYS LYS GLU ILE SER THR ILE ILE VAL PRO SEQRES 16 B 388 SER GLY THR PRO GLY PHE ILE VAL GLU PRO VAL TYR ASN SEQRES 17 B 388 LYS VAL GLY TRP ASN ALA SER ASP THR HIS PRO LEU SER SEQRES 18 B 388 PHE ASP ASP ALA ARG VAL PRO GLU GLU ASN LEU LEU GLY SEQRES 19 B 388 ILE ARG GLY LYS GLY TYR ALA ASN PHE LEU SER ILE LEU SEQRES 20 B 388 ASP GLU GLY ARG ILE ALA ILE ALA ALA LEU ALA THR GLY SEQRES 21 B 388 VAL ALA GLN GLY CYS VAL ASP GLU SER VAL LYS TYR ALA SEQRES 22 B 388 LYS GLU ARG GLN SER PHE GLY GLN PRO ILE GLY SER TYR SEQRES 23 B 388 GLN ALA ILE SER PHE LYS ILE ALA ARG MET GLU ALA ARG SEQRES 24 B 388 ALA HIS VAL ALA ARG THR ALA TYR TYR GLU ALA ALA ALA SEQRES 25 B 388 LYS MET LEU ALA GLY LYS PRO PHE LYS LYS GLU ALA ALA SEQRES 26 B 388 ILE ALA LYS MET ILE SER SER GLU ALA ALA MET ASP ASN SEQRES 27 B 388 ALA ARG ASP ALA THR GLN VAL HIS GLY GLY TYR GLY PHE SEQRES 28 B 388 MET ASN GLU TYR PRO VAL ALA ARG HIS TYR ARG ASP SER SEQRES 29 B 388 LYS ILE LEU GLU ILE GLY GLU GLY THR THR GLU VAL GLN SEQRES 30 B 388 LEU MET LEU ILE ALA ARG SER LEU GLY LEU SER HET FDA A 401 53 HET FDA B 401 53 HETNAM FDA DIHYDROFLAVINE-ADENINE DINUCLEOTIDE FORMUL 3 FDA 2(C27 H35 N9 O15 P2) FORMUL 5 HOH *122(H2 O) HELIX 1 AA1 PRO A 11 VAL A 28 1 18 HELIX 2 AA2 VAL A 28 HIS A 40 1 13 HELIX 3 AA3 PRO A 43 GLY A 54 1 12 HELIX 4 AA4 LEU A 55 LEU A 58 5 4 HELIX 5 AA5 PRO A 61 GLY A 65 5 5 HELIX 6 AA6 ASP A 70 LYS A 83 1 14 HELIX 7 AA7 ASP A 85 GLY A 99 1 15 HELIX 8 AA8 GLY A 99 GLY A 107 1 9 HELIX 9 AA9 ASN A 108 ALA A 121 1 14 HELIX 10 AB1 LYS A 237 ILE A 245 1 9 HELIX 11 AB2 ILE A 245 ARG A 275 1 31 HELIX 12 AB3 TYR A 285 ALA A 315 1 31 HELIX 13 AB4 PHE A 319 GLY A 346 1 28 HELIX 14 AB5 GLY A 347 MET A 351 5 5 HELIX 15 AB6 TYR A 354 SER A 363 1 10 HELIX 16 AB7 LYS A 364 ILE A 368 5 5 HELIX 17 AB8 THR A 372 LEU A 384 1 13 HELIX 18 AB9 PRO B 11 VAL B 28 1 18 HELIX 19 AC1 VAL B 28 HIS B 40 1 13 HELIX 20 AC2 PRO B 43 GLY B 54 1 12 HELIX 21 AC3 LEU B 55 LEU B 58 5 4 HELIX 22 AC4 PRO B 61 GLY B 65 5 5 HELIX 23 AC5 ASP B 70 LYS B 83 1 14 HELIX 24 AC6 ASP B 85 GLY B 99 1 15 HELIX 25 AC7 ALA B 100 GLY B 107 1 8 HELIX 26 AC8 ASN B 108 ALA B 121 1 14 HELIX 27 AC9 LYS B 237 SER B 244 1 8 HELIX 28 AD1 ILE B 245 ARG B 275 1 31 HELIX 29 AD2 TYR B 285 ALA B 315 1 31 HELIX 30 AD3 PHE B 319 HIS B 345 1 27 HELIX 31 AD4 GLY B 346 MET B 351 5 6 HELIX 32 AD5 TYR B 354 SER B 363 1 10 HELIX 33 AD6 LYS B 364 ILE B 368 5 5 HELIX 34 AD7 THR B 372 LEU B 384 1 13 SHEET 1 AA1 4 LEU A 125 GLY A 129 0 SHEET 2 AA1 4 THR A 170 VAL A 178 1 O THR A 174 N GLY A 129 SHEET 3 AA1 4 ILE A 188 PRO A 194 -1 O SER A 189 N ALA A 177 SHEET 4 AA1 4 LEU A 231 LEU A 232 -1 O LEU A 232 N THR A 190 SHEET 1 AA2 4 THR A 145 ASP A 149 0 SHEET 2 AA2 4 GLU A 152 THR A 163 -1 O VAL A 154 N ARG A 147 SHEET 3 AA2 4 THR A 216 PRO A 227 -1 O VAL A 226 N TRP A 153 SHEET 4 AA2 4 PHE A 200 VAL A 202 -1 N ILE A 201 O SER A 220 SHEET 1 AA3 2 GLN A 276 SER A 277 0 SHEET 2 AA3 2 GLN A 280 PRO A 281 -1 O GLN A 280 N SER A 277 SHEET 1 AA4 4 LEU B 125 GLY B 129 0 SHEET 2 AA4 4 THR B 170 ALA B 177 1 O THR B 174 N GLY B 129 SHEET 3 AA4 4 SER B 189 PRO B 194 -1 O ILE B 191 N ILE B 175 SHEET 4 AA4 4 LEU B 231 LEU B 232 -1 O LEU B 232 N THR B 190 SHEET 1 AA5 4 THR B 145 ASP B 149 0 SHEET 2 AA5 4 GLU B 152 THR B 163 -1 O VAL B 154 N ARG B 147 SHEET 3 AA5 4 THR B 216 PRO B 227 -1 O VAL B 226 N TRP B 153 SHEET 4 AA5 4 PHE B 200 VAL B 202 -1 N ILE B 201 O SER B 220 SHEET 1 AA6 2 GLN B 276 SER B 277 0 SHEET 2 AA6 2 GLN B 280 PRO B 281 -1 O GLN B 280 N SER B 277 CRYST1 120.140 120.140 93.960 90.00 90.00 120.00 P 64 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008324 0.004806 0.000000 0.00000 SCALE2 0.000000 0.009611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010643 0.00000