HEADER VIRAL PROTEIN 01-DEC-21 7T15 TITLE HEXAMERIC SIVCPZ CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN P24; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN IMMUNODEFICIENCY VIRUS - CPZ; SOURCE 3 ORGANISM_TAXID: 388909; SOURCE 4 VARIANT: MT145; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CAPSID, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.A.JACQUES,C.F.DICKSON,L.C.JAMES REVDAT 3 18-OCT-23 7T15 1 REMARK REVDAT 2 09-NOV-22 7T15 1 JRNL REVDAT 1 19-OCT-22 7T15 0 JRNL AUTH L.ZULIANI-ALVAREZ,M.L.GOVASLI,J.RASAIYAAH,C.MONIT,S.O.PERRY, JRNL AUTH 2 R.P.SUMNER,S.MCALPINE-SCOTT,C.DICKSON,K.M.RIFAT FAYSAL, JRNL AUTH 3 L.HILDITCH,R.J.MILES,F.BIBOLLET-RUCHE,B.H.HAHN,T.BOECKING, JRNL AUTH 4 N.PINOTSIS,L.C.JAMES,D.A.JACQUES,G.J.TOWERS JRNL TITL EVASION OF CGAS AND TRIM5 DEFINES PANDEMIC HIV. JRNL REF NAT MICROBIOL V. 7 1762 2022 JRNL REFN ESSN 2058-5276 JRNL PMID 36289397 JRNL DOI 10.1038/S41564-022-01247-0 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32525 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1612 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2431 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3275 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.79000 REMARK 3 B22 (A**2) : -0.79000 REMARK 3 B33 (A**2) : 2.57000 REMARK 3 B12 (A**2) : -0.40000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.157 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.672 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3436 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3315 ; 0.009 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4692 ; 1.491 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7645 ; 1.347 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 449 ; 5.770 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;32.147 ;22.759 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 596 ;14.694 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;26.001 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 473 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4443 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 757 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 219 B 1 219 6783 0.060 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): -70.9808 -17.6302 -6.1412 REMARK 3 T TENSOR REMARK 3 T11: 0.0580 T22: 0.0325 REMARK 3 T33: 0.0684 T12: -0.0052 REMARK 3 T13: 0.0513 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 3.2070 L22: 2.4054 REMARK 3 L33: 2.5262 L12: 1.6986 REMARK 3 L13: 1.8156 L23: 1.5384 REMARK 3 S TENSOR REMARK 3 S11: 0.1374 S12: -0.1829 S13: -0.0725 REMARK 3 S21: 0.3291 S22: -0.1583 S23: 0.1806 REMARK 3 S31: 0.1531 S32: -0.1649 S33: 0.0209 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 219 REMARK 3 ORIGIN FOR THE GROUP (A): -65.3586 -44.4056 -6.5285 REMARK 3 T TENSOR REMARK 3 T11: 0.0454 T22: 0.0483 REMARK 3 T33: 0.0514 T12: 0.0062 REMARK 3 T13: -0.0022 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 1.2057 L22: 4.5365 REMARK 3 L33: 1.8161 L12: -0.4449 REMARK 3 L13: -0.3371 L23: 2.0206 REMARK 3 S TENSOR REMARK 3 S11: -0.1006 S12: -0.1730 S13: -0.1137 REMARK 3 S21: 0.3692 S22: 0.0660 S23: 0.1265 REMARK 3 S31: 0.1573 S32: -0.0353 S33: 0.0346 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7T15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000261127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34170 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 78.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.96300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: 3H47 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLANT: 4.5% PEG 550MME, 0.15M REMARK 280 KSCN, 0.1M TRIS (PH 9.0), 4% 2,5-HEXANEDIOL. CRYSTALS GREW IN REMARK 280 200 NL PROTEIN (12 MG/ML) + 200 NL CRYSTALLANT. CRYOPROTECTED IN REMARK 280 20% (V/V) MPD, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.39250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.39250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.39250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 58770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -90.66900 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -45.33450 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -78.52166 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 87 REMARK 465 ALA A 88 REMARK 465 GLY A 89 REMARK 465 PRO A 90 REMARK 465 ILE A 91 REMARK 465 VAL A 221 REMARK 465 GLY A 222 REMARK 465 GLY A 223 REMARK 465 PRO A 224 REMARK 465 SER A 225 REMARK 465 HIS A 226 REMARK 465 LYS A 227 REMARK 465 ALA A 228 REMARK 465 ARG A 229 REMARK 465 VAL A 230 REMARK 465 LEU A 231 REMARK 465 THR B 86 REMARK 465 HIS B 87 REMARK 465 ALA B 88 REMARK 465 GLY B 89 REMARK 465 PRO B 90 REMARK 465 ILE B 91 REMARK 465 ALA B 92 REMARK 465 PRO B 93 REMARK 465 GLY B 94 REMARK 465 GLY B 220 REMARK 465 VAL B 221 REMARK 465 GLY B 222 REMARK 465 GLY B 223 REMARK 465 PRO B 224 REMARK 465 SER B 225 REMARK 465 HIS B 226 REMARK 465 LYS B 227 REMARK 465 ALA B 228 REMARK 465 ARG B 229 REMARK 465 VAL B 230 REMARK 465 LEU B 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 GLN B 95 CG CD OE1 NE2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 -173.85 -67.39 REMARK 500 ALA A 31 -120.82 56.36 REMARK 500 SER A 178 142.88 175.76 REMARK 500 ASN B 5 -171.81 -69.38 REMARK 500 ALA B 31 -120.56 55.67 REMARK 500 ALA B 177 55.49 39.98 REMARK 500 SER B 178 144.38 -179.70 REMARK 500 REMARK 500 REMARK: NULL DBREF 7T15 A 1 231 UNP Q1A241 Q1A241_SIV 123 353 DBREF 7T15 B 1 231 UNP Q1A241 Q1A241_SIV 123 353 SEQADV 7T15 CYS A 14 UNP Q1A241 PRO 136 ENGINEERED MUTATION SEQADV 7T15 CYS A 45 UNP Q1A241 GLU 167 ENGINEERED MUTATION SEQADV 7T15 ALA A 184 UNP Q1A241 TRP 306 ENGINEERED MUTATION SEQADV 7T15 ALA A 185 UNP Q1A241 MET 307 ENGINEERED MUTATION SEQADV 7T15 CYS B 14 UNP Q1A241 PRO 136 ENGINEERED MUTATION SEQADV 7T15 CYS B 45 UNP Q1A241 GLU 167 ENGINEERED MUTATION SEQADV 7T15 ALA B 184 UNP Q1A241 TRP 306 ENGINEERED MUTATION SEQADV 7T15 ALA B 185 UNP Q1A241 MET 307 ENGINEERED MUTATION SEQRES 1 A 231 PRO VAL VAL ARG ASN ALA GLN GLY GLN LEU THR HIS ASN SEQRES 2 A 231 CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS ALA SEQRES 3 A 231 VAL GLU GLU LYS ALA PHE ASN PRO GLU VAL ILE PRO MET SEQRES 4 A 231 PHE MET ALA LEU SER CYS GLY ALA THR PRO GLN ASP LEU SEQRES 5 A 231 ASN THR MET LEU ASN THR ILE GLY GLY HIS GLN ALA ALA SEQRES 6 A 231 MET GLN ILE LEU LYS GLU VAL ILE ASN ASP GLU ALA ALA SEQRES 7 A 231 GLU TRP ASP ARG THR HIS PRO THR HIS ALA GLY PRO ILE SEQRES 8 A 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 A 231 ALA GLY THR THR SER SER LEU GLU GLU GLN VAL GLY TRP SEQRES 10 A 231 MET THR ALA ASN PRO PRO ILE PRO VAL GLY ASP ILE TYR SEQRES 11 A 231 ARG ARG TRP ILE VAL LEU GLY LEU ASN LYS ILE VAL LYS SEQRES 12 A 231 MET TYR SER PRO VAL SER ILE LEU ASP ILE LYS GLN GLY SEQRES 13 A 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 A 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN ASP VAL LYS SEQRES 15 A 231 ASN ALA ALA THR ASP THR LEU LEU ILE GLN ASN ALA ASN SEQRES 16 A 231 PRO ASP CYS LYS ASN ILE LEU ARG ALA LEU GLY PRO GLY SEQRES 17 A 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 A 231 GLY GLY PRO SER HIS LYS ALA ARG VAL LEU SEQRES 1 B 231 PRO VAL VAL ARG ASN ALA GLN GLY GLN LEU THR HIS ASN SEQRES 2 B 231 CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS ALA SEQRES 3 B 231 VAL GLU GLU LYS ALA PHE ASN PRO GLU VAL ILE PRO MET SEQRES 4 B 231 PHE MET ALA LEU SER CYS GLY ALA THR PRO GLN ASP LEU SEQRES 5 B 231 ASN THR MET LEU ASN THR ILE GLY GLY HIS GLN ALA ALA SEQRES 6 B 231 MET GLN ILE LEU LYS GLU VAL ILE ASN ASP GLU ALA ALA SEQRES 7 B 231 GLU TRP ASP ARG THR HIS PRO THR HIS ALA GLY PRO ILE SEQRES 8 B 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 B 231 ALA GLY THR THR SER SER LEU GLU GLU GLN VAL GLY TRP SEQRES 10 B 231 MET THR ALA ASN PRO PRO ILE PRO VAL GLY ASP ILE TYR SEQRES 11 B 231 ARG ARG TRP ILE VAL LEU GLY LEU ASN LYS ILE VAL LYS SEQRES 12 B 231 MET TYR SER PRO VAL SER ILE LEU ASP ILE LYS GLN GLY SEQRES 13 B 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 B 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN ASP VAL LYS SEQRES 15 B 231 ASN ALA ALA THR ASP THR LEU LEU ILE GLN ASN ALA ASN SEQRES 16 B 231 PRO ASP CYS LYS ASN ILE LEU ARG ALA LEU GLY PRO GLY SEQRES 17 B 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 B 231 GLY GLY PRO SER HIS LYS ALA ARG VAL LEU FORMUL 3 HOH *115(H2 O) HELIX 1 AA1 SER A 16 ALA A 31 1 16 HELIX 2 AA2 GLU A 35 SER A 44 1 10 HELIX 3 AA3 THR A 48 THR A 58 1 11 HELIX 4 AA4 HIS A 62 THR A 83 1 22 HELIX 5 AA5 ARG A 100 ALA A 105 1 6 HELIX 6 AA6 SER A 110 THR A 119 1 10 HELIX 7 AA7 PRO A 125 SER A 146 1 22 HELIX 8 AA8 SER A 149 ILE A 153 5 5 HELIX 9 AA9 PRO A 160 ALA A 177 1 18 HELIX 10 AB1 ASN A 183 ASN A 193 1 11 HELIX 11 AB2 ASN A 195 LEU A 205 1 11 HELIX 12 AB3 THR A 210 CYS A 218 1 9 HELIX 13 AB4 SER B 16 ALA B 31 1 16 HELIX 14 AB5 GLU B 35 SER B 44 1 10 HELIX 15 AB6 THR B 48 THR B 58 1 11 HELIX 16 AB7 HIS B 62 THR B 83 1 22 HELIX 17 AB8 ARG B 100 ALA B 105 1 6 HELIX 18 AB9 SER B 110 THR B 119 1 10 HELIX 19 AC1 PRO B 125 SER B 146 1 22 HELIX 20 AC2 SER B 149 ILE B 153 5 5 HELIX 21 AC3 PRO B 160 ALA B 177 1 18 HELIX 22 AC4 ASN B 183 ASN B 193 1 11 HELIX 23 AC5 ASN B 195 LEU B 205 1 11 HELIX 24 AC6 THR B 210 CYS B 218 1 9 SHEET 1 AA1 2 VAL A 2 ARG A 4 0 SHEET 2 AA1 2 LEU A 10 HIS A 12 -1 O THR A 11 N VAL A 3 SHEET 1 AA2 2 VAL B 2 ARG B 4 0 SHEET 2 AA2 2 LEU B 10 HIS B 12 -1 O THR B 11 N VAL B 3 SSBOND 1 CYS A 14 CYS B 45 1555 3445 2.27 SSBOND 2 CYS A 45 CYS B 14 1555 1555 2.08 SSBOND 3 CYS A 198 CYS A 218 1555 1555 2.06 SSBOND 4 CYS B 198 CYS B 218 1555 1555 2.07 CISPEP 1 ASN A 121 PRO A 122 0 -5.40 CISPEP 2 ASN B 121 PRO B 122 0 -3.95 CRYST1 90.669 90.669 116.785 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011029 0.006368 0.000000 0.00000 SCALE2 0.000000 0.012735 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008563 0.00000