HEADER LYASE 12-DEC-21 7T5I TITLE CRYSTAL STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH R-IPA(2- TITLE 2 (1H-INDOL-3-YL) PROPAN-1-AMINE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRICTOSIDINE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.3.3.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RAUVOLFIA SERPENTINA; SOURCE 3 ORGANISM_COMMON: SERPENTWOOD; SOURCE 4 ORGANISM_TAXID: 4060; SOURCE 5 GENE: STR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15PREP4; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE-2 KEYWDS ALKALOID METABOLISM, SIX BLADED BETA PROPELLER FOLD, STR1, LYASE, KEYWDS 2 VACUOLE, SYNTHASE, GLYCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,S.PANJIKAR,Y.FUTAMURA,N.SHAO,H.OSADA,H.ZOU REVDAT 3 23-OCT-24 7T5I 1 REMARK REVDAT 2 25-OCT-23 7T5I 1 REMARK REVDAT 1 14-DEC-22 7T5I 0 JRNL AUTH H.LIU,S.PANJIKAR,Y.FUTAMURA,N.SHAO,H.OSADA,H.ZOU JRNL TITL BETA-BRANCHED TRYPTAMINE PROVOKED NON SANDWICH-LIKE-MODE JRNL TITL 2 CATALYSIS OF STRICTOSIDINE SYNTHASE TO ANTIMALARIAL INDOLE JRNL TITL 3 ALKALOIDS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.MA,S.PANJIKAR,J.KOEPKE,E.LORIS,J.STOECKIGT REMARK 1 TITL THE STRUCTURE OF RAUVOLFIA SERPENTINA STRICTOSIDINE SYNTHASE REMARK 1 TITL 2 IS A NOVEL SIX-BLADED BETA-PROPELLER FOLD IN PLANT PROTEINS. REMARK 1 REF PLANT CELL V. 18 907 2006 REMARK 1 REFN ISSN 1040-4651 REMARK 1 PMID 16531499 REMARK 1 DOI 10.1105/TPC.105.038018 REMARK 2 REMARK 2 RESOLUTION. 2.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20762 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 956 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1531 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4800 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.33000 REMARK 3 B22 (A**2) : 3.33000 REMARK 3 B33 (A**2) : -10.82000 REMARK 3 B12 (A**2) : 1.67000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.915 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.316 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.253 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4960 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6750 ; 1.599 ; 1.632 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 608 ; 7.556 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 248 ;34.880 ;23.710 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 774 ;17.519 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 628 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3868 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2438 ; 3.332 ; 5.280 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3044 ; 5.176 ; 9.904 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2522 ; 4.292 ; 5.543 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7260 ; 8.784 ;73.787 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 33 A 324 2 REMARK 3 1 B 33 B 324 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1139 ; 0.24 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 1168 ; 4.22 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1139 ; 5.07 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 157 REMARK 3 ORIGIN FOR THE GROUP (A): 39.3535 45.7772 -8.5812 REMARK 3 T TENSOR REMARK 3 T11: 0.0157 T22: 0.1705 REMARK 3 T33: 0.0209 T12: 0.0483 REMARK 3 T13: -0.0060 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.6942 L22: 4.4837 REMARK 3 L33: 4.1475 L12: -0.5976 REMARK 3 L13: 0.2934 L23: 0.6691 REMARK 3 S TENSOR REMARK 3 S11: 0.0504 S12: 0.2199 S13: -0.0964 REMARK 3 S21: -0.0396 S22: 0.0504 S23: -0.1857 REMARK 3 S31: 0.1895 S32: 0.5895 S33: -0.1008 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 158 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6718 33.4762 0.6590 REMARK 3 T TENSOR REMARK 3 T11: 0.2620 T22: 0.0498 REMARK 3 T33: 0.1237 T12: 0.0387 REMARK 3 T13: -0.0396 T23: -0.0588 REMARK 3 L TENSOR REMARK 3 L11: 5.0563 L22: 1.8207 REMARK 3 L33: 5.0999 L12: 1.7833 REMARK 3 L13: -1.6716 L23: -0.4853 REMARK 3 S TENSOR REMARK 3 S11: -0.1065 S12: 0.3731 S13: -0.3791 REMARK 3 S21: 0.2717 S22: 0.1513 S23: 0.0596 REMARK 3 S31: 0.6951 S32: -0.1454 S33: -0.0449 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 319 REMARK 3 ORIGIN FOR THE GROUP (A): 31.9303 46.5870 11.0931 REMARK 3 T TENSOR REMARK 3 T11: 0.1123 T22: 0.0448 REMARK 3 T33: 0.0119 T12: 0.0555 REMARK 3 T13: -0.0060 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 2.4642 L22: 3.7622 REMARK 3 L33: 3.1524 L12: 0.3051 REMARK 3 L13: -0.6982 L23: -0.8164 REMARK 3 S TENSOR REMARK 3 S11: 0.1423 S12: -0.0007 S13: -0.1124 REMARK 3 S21: 0.3081 S22: -0.0555 S23: 0.0481 REMARK 3 S31: 0.2374 S32: 0.2539 S33: -0.0868 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 320 A 333 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1716 58.3256 0.8756 REMARK 3 T TENSOR REMARK 3 T11: 0.3127 T22: 0.1486 REMARK 3 T33: 0.1758 T12: 0.1354 REMARK 3 T13: -0.0027 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.8554 L22: 3.1147 REMARK 3 L33: 6.7226 L12: 1.6550 REMARK 3 L13: -1.3487 L23: 0.8839 REMARK 3 S TENSOR REMARK 3 S11: -0.1646 S12: -0.0898 S13: 0.2193 REMARK 3 S21: 0.1218 S22: -0.0794 S23: 0.4170 REMARK 3 S31: -0.4209 S32: -0.4356 S33: 0.2440 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 32 B 92 REMARK 3 ORIGIN FOR THE GROUP (A): 36.9952 73.7508 -13.8610 REMARK 3 T TENSOR REMARK 3 T11: 0.0811 T22: 0.1487 REMARK 3 T33: 0.1074 T12: -0.0688 REMARK 3 T13: -0.0069 T23: -0.0454 REMARK 3 L TENSOR REMARK 3 L11: 3.1132 L22: 3.2359 REMARK 3 L33: 7.8849 L12: -0.7842 REMARK 3 L13: -2.2161 L23: -0.4424 REMARK 3 S TENSOR REMARK 3 S11: 0.1250 S12: 0.2657 S13: -0.2714 REMARK 3 S21: -0.1635 S22: -0.2040 S23: 0.0097 REMARK 3 S31: -0.1717 S32: -0.1865 S33: 0.0790 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 93 B 270 REMARK 3 ORIGIN FOR THE GROUP (A): 39.5697 93.5848 -12.6482 REMARK 3 T TENSOR REMARK 3 T11: 0.3341 T22: 0.1683 REMARK 3 T33: 0.3271 T12: 0.0003 REMARK 3 T13: 0.0565 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.0999 L22: 4.0615 REMARK 3 L33: 4.2997 L12: -0.5306 REMARK 3 L13: -0.9265 L23: 1.8822 REMARK 3 S TENSOR REMARK 3 S11: 0.3004 S12: 0.1414 S13: 0.4368 REMARK 3 S21: -0.5353 S22: -0.2514 S23: -0.3701 REMARK 3 S31: -0.7942 S32: -0.0989 S33: -0.0490 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 271 B 280 REMARK 3 ORIGIN FOR THE GROUP (A): 57.1272 87.0175 3.3003 REMARK 3 T TENSOR REMARK 3 T11: 0.3123 T22: 0.4301 REMARK 3 T33: 0.4427 T12: -0.0395 REMARK 3 T13: -0.0559 T23: -0.0553 REMARK 3 L TENSOR REMARK 3 L11: 1.4156 L22: 6.1276 REMARK 3 L33: 4.1036 L12: -2.9393 REMARK 3 L13: -1.2633 L23: 2.3892 REMARK 3 S TENSOR REMARK 3 S11: 0.0506 S12: -0.1015 S13: 0.2113 REMARK 3 S21: -0.1400 S22: 0.2433 S23: -0.4343 REMARK 3 S31: -0.1246 S32: 0.0631 S33: -0.2939 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 281 B 333 REMARK 3 ORIGIN FOR THE GROUP (A): 38.8015 83.3781 2.5159 REMARK 3 T TENSOR REMARK 3 T11: 0.1148 T22: 0.2028 REMARK 3 T33: 0.1481 T12: -0.0822 REMARK 3 T13: -0.0710 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 0.8251 L22: 7.2541 REMARK 3 L33: 3.7804 L12: -0.3794 REMARK 3 L13: -0.9627 L23: 1.8763 REMARK 3 S TENSOR REMARK 3 S11: 0.0044 S12: -0.2561 S13: 0.1222 REMARK 3 S21: 0.2008 S22: 0.1307 S23: -0.2908 REMARK 3 S31: -0.1080 S32: 0.3478 S33: -0.1350 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7T5I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000261628. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : DCM REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21817 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.940 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.60200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTO-RICKSHAW REMARK 200 STARTING MODEL: 2FP8 REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8 M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE AND 0.1 M HEPES, PH 7.4, 5 MG/ML STRICTOSIDINE AND REMARK 280 3 MM R-IPA (2-(1H-INDOL-3-YL) PROPAN-1-AMINE),, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 75.15250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.38932 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.52067 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 75.15250 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 43.38932 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.52067 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 75.15250 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 43.38932 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.52067 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 86.77863 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 81.04133 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 86.77863 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 81.04133 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 86.77863 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 81.04133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 334 REMARK 465 LYS A 335 REMARK 465 LYS A 336 REMARK 465 GLY A 337 REMARK 465 ASN A 338 REMARK 465 SER A 339 REMARK 465 PHE A 340 REMARK 465 VAL A 341 REMARK 465 SER A 342 REMARK 465 SER A 343 REMARK 465 HIS A 344 REMARK 465 ASP B 334 REMARK 465 LYS B 335 REMARK 465 LYS B 336 REMARK 465 GLY B 337 REMARK 465 ASN B 338 REMARK 465 SER B 339 REMARK 465 PHE B 340 REMARK 465 VAL B 341 REMARK 465 SER B 342 REMARK 465 SER B 343 REMARK 465 HIS B 344 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 29 CG CD REMARK 470 ILE A 30 CG1 CG2 CD1 REMARK 470 PRO B 29 CG CD REMARK 470 ILE B 30 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 40 -134.07 58.64 REMARK 500 ALA A 42 60.44 60.64 REMARK 500 PHE A 77 -59.23 -130.47 REMARK 500 ARG A 103 116.33 -160.44 REMARK 500 HIS A 124 -143.24 56.30 REMARK 500 ASP A 143 23.30 49.78 REMARK 500 TRP A 149 71.51 -157.33 REMARK 500 TYR A 151 -52.39 -139.73 REMARK 500 ASP A 172 -166.72 -100.09 REMARK 500 LYS A 185 56.29 -116.52 REMARK 500 VAL A 208 79.02 68.31 REMARK 500 ASN A 252 66.03 39.79 REMARK 500 SER A 269 70.99 -101.80 REMARK 500 SER B 40 -131.77 57.83 REMARK 500 ALA B 42 61.18 65.89 REMARK 500 PHE B 77 -57.24 -129.76 REMARK 500 HIS B 124 -151.47 55.84 REMARK 500 TRP B 149 73.97 -156.56 REMARK 500 TYR B 151 -47.45 -140.11 REMARK 500 ASP B 172 -157.54 -98.03 REMARK 500 LYS B 185 59.41 -117.49 REMARK 500 VAL B 208 73.29 70.42 REMARK 500 SER B 269 70.76 -101.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 7T5I A 29 344 UNP P68175 STSY_RAUSE 29 344 DBREF 7T5I B 29 344 UNP P68175 STSY_RAUSE 29 344 SEQRES 1 A 316 PRO ILE LEU LYS GLU ILE LEU ILE GLU ALA PRO SER TYR SEQRES 2 A 316 ALA PRO ASN SER PHE THR PHE ASP SER THR ASN LYS GLY SEQRES 3 A 316 PHE TYR THR SER VAL GLN ASP GLY ARG VAL ILE LYS TYR SEQRES 4 A 316 GLU GLY PRO ASN SER GLY PHE VAL ASP PHE ALA TYR ALA SEQRES 5 A 316 SER PRO TYR TRP ASN LYS ALA PHE CYS GLU ASN SER THR SEQRES 6 A 316 ASP ALA GLU LYS ARG PRO LEU CYS GLY ARG THR TYR ASP SEQRES 7 A 316 ILE SER TYR ASN LEU GLN ASN ASN GLN LEU TYR ILE VAL SEQRES 8 A 316 ASP CYS TYR TYR HIS LEU SER VAL VAL GLY SER GLU GLY SEQRES 9 A 316 GLY HIS ALA THR GLN LEU ALA THR SER VAL ASP GLY VAL SEQRES 10 A 316 PRO PHE LYS TRP LEU TYR ALA VAL THR VAL ASP GLN ARG SEQRES 11 A 316 THR GLY ILE VAL TYR PHE THR ASP VAL SER THR LEU TYR SEQRES 12 A 316 ASP ASP ARG GLY VAL GLN GLN ILE MET ASP THR SER ASP SEQRES 13 A 316 LYS THR GLY ARG LEU ILE LYS TYR ASP PRO SER THR LYS SEQRES 14 A 316 GLU THR THR LEU LEU LEU LYS GLU LEU HIS VAL PRO GLY SEQRES 15 A 316 GLY ALA GLU VAL SER ALA ASP SER SER PHE VAL LEU VAL SEQRES 16 A 316 ALA GLU PHE LEU SER HIS GLN ILE VAL LYS TYR TRP LEU SEQRES 17 A 316 GLU GLY PRO LYS LYS GLY THR ALA GLU VAL LEU VAL LYS SEQRES 18 A 316 ILE PRO ASN PRO GLY ASN ILE LYS ARG ASN ALA ASP GLY SEQRES 19 A 316 HIS PHE TRP VAL SER SER SER GLU GLU LEU ASP GLY ASN SEQRES 20 A 316 MET HIS GLY ARG VAL ASP PRO LYS GLY ILE LYS PHE ASP SEQRES 21 A 316 GLU PHE GLY ASN ILE LEU GLU VAL ILE PRO LEU PRO PRO SEQRES 22 A 316 PRO PHE ALA GLY GLU HIS PHE GLU GLN ILE GLN GLU HIS SEQRES 23 A 316 ASP GLY LEU LEU TYR ILE GLY THR LEU PHE HIS GLY SER SEQRES 24 A 316 VAL GLY ILE LEU VAL TYR ASP LYS LYS GLY ASN SER PHE SEQRES 25 A 316 VAL SER SER HIS SEQRES 1 B 316 PRO ILE LEU LYS GLU ILE LEU ILE GLU ALA PRO SER TYR SEQRES 2 B 316 ALA PRO ASN SER PHE THR PHE ASP SER THR ASN LYS GLY SEQRES 3 B 316 PHE TYR THR SER VAL GLN ASP GLY ARG VAL ILE LYS TYR SEQRES 4 B 316 GLU GLY PRO ASN SER GLY PHE VAL ASP PHE ALA TYR ALA SEQRES 5 B 316 SER PRO TYR TRP ASN LYS ALA PHE CYS GLU ASN SER THR SEQRES 6 B 316 ASP ALA GLU LYS ARG PRO LEU CYS GLY ARG THR TYR ASP SEQRES 7 B 316 ILE SER TYR ASN LEU GLN ASN ASN GLN LEU TYR ILE VAL SEQRES 8 B 316 ASP CYS TYR TYR HIS LEU SER VAL VAL GLY SER GLU GLY SEQRES 9 B 316 GLY HIS ALA THR GLN LEU ALA THR SER VAL ASP GLY VAL SEQRES 10 B 316 PRO PHE LYS TRP LEU TYR ALA VAL THR VAL ASP GLN ARG SEQRES 11 B 316 THR GLY ILE VAL TYR PHE THR ASP VAL SER THR LEU TYR SEQRES 12 B 316 ASP ASP ARG GLY VAL GLN GLN ILE MET ASP THR SER ASP SEQRES 13 B 316 LYS THR GLY ARG LEU ILE LYS TYR ASP PRO SER THR LYS SEQRES 14 B 316 GLU THR THR LEU LEU LEU LYS GLU LEU HIS VAL PRO GLY SEQRES 15 B 316 GLY ALA GLU VAL SER ALA ASP SER SER PHE VAL LEU VAL SEQRES 16 B 316 ALA GLU PHE LEU SER HIS GLN ILE VAL LYS TYR TRP LEU SEQRES 17 B 316 GLU GLY PRO LYS LYS GLY THR ALA GLU VAL LEU VAL LYS SEQRES 18 B 316 ILE PRO ASN PRO GLY ASN ILE LYS ARG ASN ALA ASP GLY SEQRES 19 B 316 HIS PHE TRP VAL SER SER SER GLU GLU LEU ASP GLY ASN SEQRES 20 B 316 MET HIS GLY ARG VAL ASP PRO LYS GLY ILE LYS PHE ASP SEQRES 21 B 316 GLU PHE GLY ASN ILE LEU GLU VAL ILE PRO LEU PRO PRO SEQRES 22 B 316 PRO PHE ALA GLY GLU HIS PHE GLU GLN ILE GLN GLU HIS SEQRES 23 B 316 ASP GLY LEU LEU TYR ILE GLY THR LEU PHE HIS GLY SER SEQRES 24 B 316 VAL GLY ILE LEU VAL TYR ASP LYS LYS GLY ASN SER PHE SEQRES 25 B 316 VAL SER SER HIS HET XL4 A 401 13 HET XL4 B 401 13 HETNAM XL4 (2R)-2-(1H-INDOL-3-YL)PROPAN-1-AMINE FORMUL 3 XL4 2(C11 H14 N2) FORMUL 5 HOH *4(H2 O) HELIX 1 AA1 ASN A 85 GLU A 90 1 6 HELIX 2 AA2 ASP A 94 GLU A 96 5 3 HELIX 3 AA3 LYS A 97 GLY A 102 1 6 HELIX 4 AA4 GLY A 175 SER A 183 1 9 HELIX 5 AA5 PHE A 226 HIS A 229 5 4 HELIX 6 AA6 ASN B 85 GLU B 90 1 6 HELIX 7 AA7 ASP B 94 GLU B 96 5 3 HELIX 8 AA8 LYS B 97 GLY B 102 1 6 HELIX 9 AA9 GLY B 175 SER B 183 1 9 HELIX 10 AB1 PHE B 226 SER B 228 5 3 SHEET 1 AA1 8 GLN A 310 HIS A 314 0 SHEET 2 AA1 8 LEU A 317 GLY A 321 -1 O TYR A 319 N GLN A 312 SHEET 3 AA1 8 SER A 327 VAL A 332 -1 O GLY A 329 N ILE A 320 SHEET 4 AA1 8 ILE A 30 GLU A 37 -1 N ILE A 36 O VAL A 328 SHEET 5 AA1 8 ILE B 30 GLU B 37 1 O LEU B 35 N GLU A 33 SHEET 6 AA1 8 SER B 327 VAL B 332 -1 O ILE B 330 N ILE B 34 SHEET 7 AA1 8 LEU B 317 GLY B 321 -1 N LEU B 318 O LEU B 331 SHEET 8 AA1 8 GLN B 310 HIS B 314 -1 N HIS B 314 O LEU B 317 SHEET 1 AA2 5 SER A 45 THR A 47 0 SHEET 2 AA2 5 PHE A 55 SER A 58 -1 O TYR A 56 N THR A 47 SHEET 3 AA2 5 ARG A 63 TYR A 67 -1 O TYR A 67 N PHE A 55 SHEET 4 AA2 5 PHE A 74 TYR A 79 -1 O ALA A 78 N VAL A 64 SHEET 5 AA2 5 GLY A 133 HIS A 134 1 O GLY A 133 N PHE A 77 SHEET 1 AA3 4 THR A 104 ASN A 110 0 SHEET 2 AA3 4 GLN A 115 ASP A 120 -1 O GLN A 115 N ASN A 110 SHEET 3 AA3 4 HIS A 124 VAL A 128 -1 O VAL A 128 N LEU A 116 SHEET 4 AA3 4 THR A 136 ALA A 139 -1 O LEU A 138 N LEU A 125 SHEET 1 AA4 2 SER A 141 VAL A 142 0 SHEET 2 AA4 2 VAL A 145 PRO A 146 -1 O VAL A 145 N VAL A 142 SHEET 1 AA5 4 LEU A 150 VAL A 155 0 SHEET 2 AA5 4 VAL A 162 ASP A 166 -1 O TYR A 163 N THR A 154 SHEET 3 AA5 4 GLY A 187 TYR A 192 -1 O ILE A 190 N PHE A 164 SHEET 4 AA5 4 THR A 199 LEU A 206 -1 O THR A 200 N LYS A 191 SHEET 1 AA6 4 GLY A 211 VAL A 214 0 SHEET 2 AA6 4 PHE A 220 GLU A 225 -1 O LEU A 222 N GLU A 213 SHEET 3 AA6 4 GLN A 230 TRP A 235 -1 O TYR A 234 N VAL A 221 SHEET 4 AA6 4 ALA A 244 VAL A 248 -1 O GLU A 245 N LYS A 233 SHEET 1 AA7 4 PRO A 253 ARG A 258 0 SHEET 2 AA7 4 PHE A 264 GLU A 271 -1 O TRP A 265 N LYS A 257 SHEET 3 AA7 4 VAL A 280 PHE A 287 -1 O PHE A 287 N PHE A 264 SHEET 4 AA7 4 ILE A 293 PRO A 298 -1 O LEU A 294 N LYS A 286 SHEET 1 AA8 5 SER B 45 THR B 47 0 SHEET 2 AA8 5 PHE B 55 SER B 58 -1 O TYR B 56 N THR B 47 SHEET 3 AA8 5 ARG B 63 TYR B 67 -1 O TYR B 67 N PHE B 55 SHEET 4 AA8 5 PHE B 74 TYR B 79 -1 O VAL B 75 N LYS B 66 SHEET 5 AA8 5 GLY B 133 HIS B 134 1 O GLY B 133 N PHE B 77 SHEET 1 AA9 4 THR B 104 ASN B 110 0 SHEET 2 AA9 4 GLN B 115 ASP B 120 -1 O GLN B 115 N ASN B 110 SHEET 3 AA9 4 HIS B 124 VAL B 128 -1 O VAL B 128 N LEU B 116 SHEET 4 AA9 4 THR B 136 ALA B 139 -1 O LEU B 138 N LEU B 125 SHEET 1 AB1 2 SER B 141 VAL B 142 0 SHEET 2 AB1 2 VAL B 145 PRO B 146 -1 O VAL B 145 N VAL B 142 SHEET 1 AB2 4 LEU B 150 VAL B 155 0 SHEET 2 AB2 4 VAL B 162 ASP B 166 -1 O TYR B 163 N THR B 154 SHEET 3 AB2 4 GLY B 187 TYR B 192 -1 O ILE B 190 N PHE B 164 SHEET 4 AB2 4 THR B 199 LEU B 206 -1 O THR B 200 N LYS B 191 SHEET 1 AB3 4 GLY B 211 VAL B 214 0 SHEET 2 AB3 4 PHE B 220 GLU B 225 -1 O LEU B 222 N GLU B 213 SHEET 3 AB3 4 GLN B 230 TRP B 235 -1 O TYR B 234 N VAL B 221 SHEET 4 AB3 4 ALA B 244 LYS B 249 -1 O GLU B 245 N LYS B 233 SHEET 1 AB4 4 PRO B 253 ARG B 258 0 SHEET 2 AB4 4 PHE B 264 GLU B 271 -1 O TRP B 265 N LYS B 257 SHEET 3 AB4 4 VAL B 280 PHE B 287 -1 O PHE B 287 N PHE B 264 SHEET 4 AB4 4 ILE B 293 PRO B 298 -1 O LEU B 294 N LYS B 286 SSBOND 1 CYS A 89 CYS A 101 1555 1555 2.12 SSBOND 2 CYS B 89 CYS B 101 1555 1555 2.11 CISPEP 1 PRO A 301 PRO A 302 0 7.46 CISPEP 2 PRO B 301 PRO B 302 0 7.50 CRYST1 150.305 150.305 121.562 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006653 0.003841 0.000000 0.00000 SCALE2 0.000000 0.007682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008226 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.957749 -0.161825 -0.237760 84.56055 1 MTRIX2 2 -0.014926 -0.797606 0.602994 120.70254 1 MTRIX3 2 -0.287218 0.581065 0.761491 -31.57642 1