HEADER DNA BINDING PROTEIN, VIRAL PROTEIN 19-DEC-21 7T9H TITLE HIV INTEGRASE IN COMPLEX WITH COMPOUND-15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DNA INTEGRATION, AIDS, RNASEH, LEDGF, ENDONUCLEASE, HIV-1 INTEGRASE, KEYWDS 2 DNA BINDING PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.A.KHAN,H.LEWIS,K.KISH REVDAT 2 18-OCT-23 7T9H 1 REMARK REVDAT 1 06-APR-22 7T9H 0 JRNL AUTH B.N.NAIDU,M.PATEL,B.MCAULIFFE,B.DING,C.CIANCI, JRNL AUTH 2 J.SIMMERMACHER,S.JENKINS,D.D.PARKER,P.SIVAPRAKASAM,J.A.KHAN, JRNL AUTH 3 K.KISH,H.LEWIS,U.HANUMEGOWDA,M.KRYSTAL,N.A.MEANWELL, JRNL AUTH 4 J.F.KADOW JRNL TITL DESIGN, SYNTHESIS, AND PRECLINICAL PROFILING OF GSK3739936 JRNL TITL 2 (BMS-986180), AN ALLOSTERIC INHIBITOR OF HIV-1 INTEGRASE JRNL TITL 3 WITH BROAD-SPECTRUM ACTIVITY TOWARD 124/125 POLYMORPHS. JRNL REF J.MED.CHEM. V. 65 4949 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35235334 JRNL DOI 10.1021/ACS.JMEDCHEM.1C02169 REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 (17-DEC-2019) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 11536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 554 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 28 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.01 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 428 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2949 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 408 REMARK 3 BIN R VALUE (WORKING SET) : 0.2982 REMARK 3 BIN FREE R VALUE : 0.2435 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.67 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 20 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2191 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.99860 REMARK 3 B22 (A**2) : -11.99860 REMARK 3 B33 (A**2) : 23.99730 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.410 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.590 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.306 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.548 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.306 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.885 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2289 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3121 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 736 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 390 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2289 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 315 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1731 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.83 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.48 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 13.2073 -18.7837 -24.2932 REMARK 3 T TENSOR REMARK 3 T11: -0.1919 T22: 0.1973 REMARK 3 T33: -0.2639 T12: 0.1634 REMARK 3 T13: -0.0054 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 4.7874 L22: 2.8462 REMARK 3 L33: 6.7252 L12: -0.5261 REMARK 3 L13: 0.2212 L23: -0.2915 REMARK 3 S TENSOR REMARK 3 S11: -0.2948 S12: -0.4777 S13: 0.1631 REMARK 3 S21: 0.0904 S22: 0.1458 S23: -0.1746 REMARK 3 S31: -0.7323 S32: 0.1284 S33: 0.1490 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 0.2397 -27.5918 -11.6742 REMARK 3 T TENSOR REMARK 3 T11: -0.1925 T22: 0.2122 REMARK 3 T33: -0.2268 T12: 0.2575 REMARK 3 T13: 0.0382 T23: 0.0971 REMARK 3 L TENSOR REMARK 3 L11: 4.0675 L22: 1.4665 REMARK 3 L33: 6.7664 L12: -0.7475 REMARK 3 L13: -0.3061 L23: -1.3010 REMARK 3 S TENSOR REMARK 3 S11: -0.2773 S12: -0.4886 S13: 0.0251 REMARK 3 S21: 0.3122 S22: 0.2235 S23: 0.2126 REMARK 3 S31: -0.0508 S32: -0.4188 S33: 0.0539 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7T9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000261878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0? REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 92 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11604 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.530 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6NCJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.6%(W/V) PEG 3350, 261 MM AMMONIUM REMARK 280 ACETATE, 0.81% GLYCEROL(V/V), 91 MM MAGNESIUM CHLORIDE AND 100 REMARK 280 MM MES PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.46167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 150.92333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 150.92333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 75.46167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 47 REMARK 465 SER A 48 REMARK 465 HIS A 49 REMARK 465 MET A 50 REMARK 465 HIS A 51 REMARK 465 GLY A 52 REMARK 465 THR A 210 REMARK 465 LYS A 211 REMARK 465 GLU A 212 REMARK 465 GLY B 47 REMARK 465 SER B 48 REMARK 465 HIS B 49 REMARK 465 MET B 50 REMARK 465 HIS B 51 REMARK 465 GLY B 52 REMARK 465 GLN B 53 REMARK 465 VAL B 54 REMARK 465 ASP B 55 REMARK 465 SER B 56 REMARK 465 PRO B 142 REMARK 465 TYR B 143 REMARK 465 ASN B 144 REMARK 465 PRO B 145 REMARK 465 GLN B 146 REMARK 465 SER B 147 REMARK 465 GLN B 148 REMARK 465 LYS B 188 REMARK 465 GLY B 189 REMARK 465 GLY B 190 REMARK 465 ILE B 191 REMARK 465 GLY B 192 REMARK 465 GLY B 193 REMARK 465 GLN B 209 REMARK 465 THR B 210 REMARK 465 LYS B 211 REMARK 465 GLU B 212 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 LYS A 127 CG CD CE NZ REMARK 470 LYS A 136 CE NZ REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 LYS A 160 CE NZ REMARK 470 LYS A 186 CD CE NZ REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 TYR A 194 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 199 CD NE CZ NH1 NH2 REMARK 470 ILE A 203 CG1 CG2 CD1 REMARK 470 ILE A 208 CG1 CG2 CD1 REMARK 470 GLN A 209 CD OE1 NE2 REMARK 470 LEU B 74 CD1 CD2 REMARK 470 LEU B 102 CD1 CD2 REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 SER B 153 OG REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 LYS B 160 CD CE NZ REMARK 470 LYS B 186 CD CE NZ REMARK 470 ARG B 187 NE CZ NH1 NH2 REMARK 470 TYR B 194 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR B 206 OG1 CG2 REMARK 470 ILE B 208 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 79 -59.80 -29.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD1 REMARK 620 2 ASP A 116 OD2 83.8 REMARK 620 3 HOH A 401 O 76.7 72.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 64 OD1 REMARK 620 2 ASP B 116 OD2 63.3 REMARK 620 3 HOH B 402 O 60.2 71.2 REMARK 620 N 1 2 DBREF 7T9H A 47 212 UNP Q76353 Q76353_9HIV1 47 212 DBREF 7T9H B 47 212 UNP Q76353 Q76353_9HIV1 47 212 SEQADV 7T9H SER A 48 UNP Q76353 GLU 48 CONFLICT SEQADV 7T9H HIS A 49 UNP Q76353 ALA 49 CONFLICT SEQADV 7T9H SER A 56 UNP Q76353 CYS 56 CONFLICT SEQADV 7T9H GLU A 131 UNP Q76353 TRP 131 CONFLICT SEQADV 7T9H LYS A 185 UNP Q76353 PHE 185 CONFLICT SEQADV 7T9H SER B 48 UNP Q76353 GLU 48 CONFLICT SEQADV 7T9H HIS B 49 UNP Q76353 ALA 49 CONFLICT SEQADV 7T9H SER B 56 UNP Q76353 CYS 56 CONFLICT SEQADV 7T9H GLU B 131 UNP Q76353 TRP 131 CONFLICT SEQADV 7T9H LYS B 185 UNP Q76353 PHE 185 CONFLICT SEQRES 1 A 166 GLY SER HIS MET HIS GLY GLN VAL ASP SER SER PRO GLY SEQRES 2 A 166 ILE TRP GLN LEU ASP CYS THR HIS LEU GLU GLY LYS VAL SEQRES 3 A 166 ILE LEU VAL ALA VAL HIS VAL ALA SER GLY TYR ILE GLU SEQRES 4 A 166 ALA GLU VAL ILE PRO ALA GLU THR GLY GLN GLU THR ALA SEQRES 5 A 166 TYR PHE LEU LEU LYS LEU ALA GLY ARG TRP PRO VAL LYS SEQRES 6 A 166 THR VAL HIS THR ASP ASN GLY SER ASN PHE THR SER THR SEQRES 7 A 166 THR VAL LYS ALA ALA CYS GLU TRP ALA GLY ILE LYS GLN SEQRES 8 A 166 GLU PHE GLY ILE PRO TYR ASN PRO GLN SER GLN GLY VAL SEQRES 9 A 166 ILE GLU SER MET ASN LYS GLU LEU LYS LYS ILE ILE GLY SEQRES 10 A 166 GLN VAL ARG ASP GLN ALA GLU HIS LEU LYS THR ALA VAL SEQRES 11 A 166 GLN MET ALA VAL PHE ILE HIS ASN LYS LYS ARG LYS GLY SEQRES 12 A 166 GLY ILE GLY GLY TYR SER ALA GLY GLU ARG ILE VAL ASP SEQRES 13 A 166 ILE ILE ALA THR ASP ILE GLN THR LYS GLU SEQRES 1 B 166 GLY SER HIS MET HIS GLY GLN VAL ASP SER SER PRO GLY SEQRES 2 B 166 ILE TRP GLN LEU ASP CYS THR HIS LEU GLU GLY LYS VAL SEQRES 3 B 166 ILE LEU VAL ALA VAL HIS VAL ALA SER GLY TYR ILE GLU SEQRES 4 B 166 ALA GLU VAL ILE PRO ALA GLU THR GLY GLN GLU THR ALA SEQRES 5 B 166 TYR PHE LEU LEU LYS LEU ALA GLY ARG TRP PRO VAL LYS SEQRES 6 B 166 THR VAL HIS THR ASP ASN GLY SER ASN PHE THR SER THR SEQRES 7 B 166 THR VAL LYS ALA ALA CYS GLU TRP ALA GLY ILE LYS GLN SEQRES 8 B 166 GLU PHE GLY ILE PRO TYR ASN PRO GLN SER GLN GLY VAL SEQRES 9 B 166 ILE GLU SER MET ASN LYS GLU LEU LYS LYS ILE ILE GLY SEQRES 10 B 166 GLN VAL ARG ASP GLN ALA GLU HIS LEU LYS THR ALA VAL SEQRES 11 B 166 GLN MET ALA VAL PHE ILE HIS ASN LYS LYS ARG LYS GLY SEQRES 12 B 166 GLY ILE GLY GLY TYR SER ALA GLY GLU ARG ILE VAL ASP SEQRES 13 B 166 ILE ILE ALA THR ASP ILE GLN THR LYS GLU HET MG A 301 1 HET GE7 A 302 27 HET MG B 301 1 HET GE7 B 302 27 HETNAM MG MAGNESIUM ION HETNAM GE7 (2S)-TERT-BUTOXY[2-METHYL-4-(4-METHYLPHENYL)QUINOLIN-3- HETNAM 2 GE7 YL]ACETIC ACID FORMUL 3 MG 2(MG 2+) FORMUL 4 GE7 2(C23 H25 N O3) FORMUL 7 HOH *7(H2 O) HELIX 1 AA1 THR A 93 GLY A 106 1 14 HELIX 2 AA2 SER A 123 ALA A 133 1 11 HELIX 3 AA3 GLN A 148 ARG A 166 1 19 HELIX 4 AA4 ASP A 167 ALA A 169 5 3 HELIX 5 AA5 HIS A 171 LYS A 186 1 16 HELIX 6 AA6 SER A 195 GLN A 209 1 15 HELIX 7 AA7 THR B 93 TRP B 108 1 16 HELIX 8 AA8 SER B 123 GLY B 134 1 12 HELIX 9 AA9 VAL B 150 ARG B 166 1 17 HELIX 10 AB1 ASP B 167 ALA B 169 5 3 HELIX 11 AB2 HIS B 171 LYS B 186 1 16 HELIX 12 AB3 SER B 195 ILE B 208 1 14 SHEET 1 AA1 5 ILE A 84 ILE A 89 0 SHEET 2 AA1 5 LYS A 71 HIS A 78 -1 N ALA A 76 O GLU A 85 SHEET 3 AA1 5 ILE A 60 LEU A 68 -1 N THR A 66 O ILE A 73 SHEET 4 AA1 5 THR A 112 ASP A 116 1 O HIS A 114 N LEU A 63 SHEET 5 AA1 5 LYS A 136 GLY A 140 1 O GLU A 138 N THR A 115 SHEET 1 AA2 5 ILE B 84 ILE B 89 0 SHEET 2 AA2 5 LYS B 71 HIS B 78 -1 N ALA B 76 O GLU B 85 SHEET 3 AA2 5 ILE B 60 LEU B 68 -1 N THR B 66 O ILE B 73 SHEET 4 AA2 5 THR B 112 THR B 115 1 O HIS B 114 N TRP B 61 SHEET 5 AA2 5 LYS B 136 PHE B 139 1 O LYS B 136 N VAL B 113 LINK OD1 ASP A 64 MG MG A 301 1555 1555 2.14 LINK OD2 ASP A 116 MG MG A 301 1555 1555 2.23 LINK MG MG A 301 O HOH A 401 1555 1555 2.19 LINK OD1 ASP B 64 MG MG B 301 1555 1555 2.92 LINK OD2 ASP B 116 MG MG B 301 1555 1555 2.57 LINK MG MG B 301 O HOH B 402 1555 1555 2.39 CRYST1 49.885 49.885 226.385 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020046 0.011574 0.000000 0.00000 SCALE2 0.000000 0.023147 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004417 0.00000