HEADER DE NOVO PROTEIN 22-DEC-21 7TBN TITLE LOV2-DARPIN FUSION : D11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: D11 LOV2-DARPIN FUSION; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIGHT SWITCHING, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.MITTL REVDAT 2 25-OCT-23 7TBN 1 REMARK REVDAT 1 05-JUL-23 7TBN 0 JRNL AUTH P.R.MITTL JRNL TITL LOV2-DARPIN FUSION : D11 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 58.5 REMARK 3 NUMBER OF REFLECTIONS : 57654 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2921 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 86 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 1.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 5 REMARK 3 BIN FREE R VALUE : 0.4350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5812 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 813 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : -0.81000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.07000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.196 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.189 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.830 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6065 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5900 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8213 ; 1.799 ; 1.635 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13613 ; 1.409 ; 1.588 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 771 ; 6.385 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 324 ;35.046 ;24.012 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1103 ;16.931 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;22.745 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 786 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6975 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1293 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 398 A 774 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1639 -27.6329 35.4413 REMARK 3 T TENSOR REMARK 3 T11: 0.0171 T22: 0.0128 REMARK 3 T33: 0.0053 T12: -0.0089 REMARK 3 T13: -0.0001 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.3097 L22: 0.0003 REMARK 3 L33: 0.0110 L12: 0.0011 REMARK 3 L13: -0.0555 L23: 0.0002 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: 0.0132 S13: 0.0131 REMARK 3 S21: 0.0013 S22: -0.0000 S23: -0.0008 REMARK 3 S31: -0.0011 S32: 0.0004 S33: -0.0049 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 398 B 774 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2598 10.9785 35.4508 REMARK 3 T TENSOR REMARK 3 T11: 0.0117 T22: 0.0115 REMARK 3 T33: 0.0294 T12: -0.0051 REMARK 3 T13: 0.0007 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.4272 L22: 0.0098 REMARK 3 L33: 0.1246 L12: 0.0495 REMARK 3 L13: -0.1706 L23: -0.0344 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.0039 S13: 0.0499 REMARK 3 S21: 0.0015 S22: 0.0031 S23: 0.0146 REMARK 3 S31: -0.0080 S32: 0.0061 S33: -0.0528 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7TBN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000261975. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60580 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 83.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7TAL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM SODIUM FORMATE, 18% PEG3350, REMARK 280 100 MM HEPES, PH 7.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 75.30700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.18350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 75.30700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.18350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1229 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 398 REMARK 465 SER A 399 REMARK 465 GLY A 400 REMARK 465 GLU A 401 REMARK 465 GLY B 398 REMARK 465 SER B 399 REMARK 465 GLY B 400 REMARK 465 GLU B 401 REMARK 465 GLY B 402 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 908 O HOH A 1012 1.76 REMARK 500 O HOH B 1074 O HOH B 1107 1.78 REMARK 500 O HOH B 913 O HOH B 1145 2.00 REMARK 500 O HOH A 1006 O HOH A 1260 2.06 REMARK 500 O HOH A 964 O HOH A 1248 2.07 REMARK 500 O HOH B 915 O HOH B 1116 2.07 REMARK 500 OE1 GLU A 475 O HOH A 901 2.10 REMARK 500 O HOH A 961 O HOH A 1283 2.11 REMARK 500 O HOH B 1058 O HOH B 1156 2.14 REMARK 500 O HOH A 1085 O HOH A 1243 2.15 REMARK 500 O HOH A 1051 O HOH A 1305 2.16 REMARK 500 O HOH A 1145 O HOH A 1228 2.19 REMARK 500 O HOH B 1067 O HOH B 1174 2.19 REMARK 500 O HOH B 940 O HOH B 1210 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1230 O HOH A 1230 2556 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 607 CD GLU A 607 OE1 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 730 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 450 -9.48 -59.88 REMARK 500 GLU B 412 60.00 -90.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1329 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A1330 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A1331 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A1332 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1333 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A1334 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH A1335 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH A1336 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH A1337 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A1338 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH A1339 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH A1340 DISTANCE = 7.95 ANGSTROMS REMARK 525 HOH B1263 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B1264 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH B1265 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH B1266 DISTANCE = 7.26 ANGSTROMS REMARK 525 HOH B1267 DISTANCE = 7.30 ANGSTROMS REMARK 525 HOH B1268 DISTANCE = 7.53 ANGSTROMS REMARK 525 HOH B1269 DISTANCE = 7.83 ANGSTROMS REMARK 525 HOH B1270 DISTANCE = 8.03 ANGSTROMS REMARK 525 HOH B1271 DISTANCE = 8.25 ANGSTROMS REMARK 525 HOH B1272 DISTANCE = 8.61 ANGSTROMS REMARK 525 HOH B1273 DISTANCE = 10.14 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7QNL RELATED DB: PDB REMARK 900 SIMILAR CONSTRUCT REMARK 900 RELATED ID: 7TAL RELATED DB: PDB REMARK 900 SIMILAR CONSTRUCT REMARK 900 RELATED ID: 7TBQ RELATED DB: PDB REMARK 900 SIMILAR CONSTRUCT REMARK 900 RELATED ID: 7TBO RELATED DB: PDB REMARK 900 SIMILAR CONSTRUCT REMARK 900 RELATED ID: 7TCD RELATED DB: PDB REMARK 900 SIMILAR CONSTRUCT DBREF 7TBN A 398 774 PDB 7TBN 7TBN 398 774 DBREF 7TBN B 398 774 PDB 7TBN 7TBN 398 774 SEQRES 1 A 377 GLY SER GLY GLU GLY PHE LEU GLU ALA ALA LEU GLU ARG SEQRES 2 A 377 ILE GLU LYS ASN PHE VAL ILE THR ASP PRO ARG LEU PRO SEQRES 3 A 377 ASP ASN PRO ILE ILE PHE ALA SER ASP SER PHE LEU GLN SEQRES 4 A 377 LEU THR GLU TYR SER ARG GLU GLU ILE LEU GLY ARG ASN SEQRES 5 A 377 ALA ARG PHE LEU GLN GLY PRO GLU THR ASP ARG ALA THR SEQRES 6 A 377 VAL ARG LYS ILE ARG ASP ALA ILE ASP ASN GLN THR GLU SEQRES 7 A 377 VAL THR VAL GLN LEU ILE ASN TYR THR LYS SER GLY LYS SEQRES 8 A 377 LYS PHE TRP ASN VAL PHE HIS LEU GLN PRO LEU ARG ASP SEQRES 9 A 377 GLN LYS GLY ASP VAL GLN TYR PHE ILE GLY VAL GLN LEU SEQRES 10 A 377 ASP GLY THR GLU HIS PHE SER GLY GLU ASP LEU GLU LYS SEQRES 11 A 377 LEU ILE LYS GLU ALA LYS GLN VAL ALA GLU GLU ILE ALA SEQRES 12 A 377 GLU ALA ALA LYS LEU ALA LEU LEU LYS LEU LYS ILE LYS SEQRES 13 A 377 GLU ILE GLU GLU LYS ILE LYS LYS ALA GLU ASP ASN GLY SEQRES 14 A 377 ASP GLU ASP LYS VAL LYS GLU LEU ARG GLU LYS LEU ASP SEQRES 15 A 377 LYS LEU ARG LYS ALA TYR LEU ILE LEU ALA LEU LEU GLU SEQRES 16 A 377 ALA ALA LYS LYS GLY GLN ILE GLU GLU VAL ARG ARG LEU SEQRES 17 A 377 LEU GLU LEU GLY ALA ASP ALA ASN GLY ALA ASP GLY GLY SEQRES 18 A 377 GLY THR THR PRO LEU HIS LEU ALA ALA THR SER GLY GLN SEQRES 19 A 377 LEU THR ILE VAL GLU ILE LEU LEU ARG GLN GLY ALA ASP SEQRES 20 A 377 VAL ASN ALA ALA ASP ASN THR GLY THR THR PRO LEU HIS SEQRES 21 A 377 LEU ALA ALA TYR SER GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 22 A 377 LEU LEU LYS HIS GLY ALA ASP VAL ASP ALA SER ASP VAL SEQRES 23 A 377 PHE GLY TYR THR PRO LEU HIS LEU ALA ALA TYR TRP GLY SEQRES 24 A 377 HIS LEU GLU ILE VAL GLU VAL LEU LEU LYS ASN GLY ALA SEQRES 25 A 377 ASP VAL ASN ALA MET ASP SER ASP GLY MET THR PRO LEU SEQRES 26 A 377 HIS LEU ALA ALA LYS TRP GLY TYR LEU GLU ILE VAL GLU SEQRES 27 A 377 VAL LEU LEU LYS HIS GLY ALA ASP VAL ASN ALA GLN ASP SEQRES 28 A 377 LYS PHE GLY LYS THR PRO PHE ASP LEU ALA ILE ASP ASN SEQRES 29 A 377 GLY ASN GLU ASP ILE ALA GLU VAL LEU GLN LYS ALA ALA SEQRES 1 B 377 GLY SER GLY GLU GLY PHE LEU GLU ALA ALA LEU GLU ARG SEQRES 2 B 377 ILE GLU LYS ASN PHE VAL ILE THR ASP PRO ARG LEU PRO SEQRES 3 B 377 ASP ASN PRO ILE ILE PHE ALA SER ASP SER PHE LEU GLN SEQRES 4 B 377 LEU THR GLU TYR SER ARG GLU GLU ILE LEU GLY ARG ASN SEQRES 5 B 377 ALA ARG PHE LEU GLN GLY PRO GLU THR ASP ARG ALA THR SEQRES 6 B 377 VAL ARG LYS ILE ARG ASP ALA ILE ASP ASN GLN THR GLU SEQRES 7 B 377 VAL THR VAL GLN LEU ILE ASN TYR THR LYS SER GLY LYS SEQRES 8 B 377 LYS PHE TRP ASN VAL PHE HIS LEU GLN PRO LEU ARG ASP SEQRES 9 B 377 GLN LYS GLY ASP VAL GLN TYR PHE ILE GLY VAL GLN LEU SEQRES 10 B 377 ASP GLY THR GLU HIS PHE SER GLY GLU ASP LEU GLU LYS SEQRES 11 B 377 LEU ILE LYS GLU ALA LYS GLN VAL ALA GLU GLU ILE ALA SEQRES 12 B 377 GLU ALA ALA LYS LEU ALA LEU LEU LYS LEU LYS ILE LYS SEQRES 13 B 377 GLU ILE GLU GLU LYS ILE LYS LYS ALA GLU ASP ASN GLY SEQRES 14 B 377 ASP GLU ASP LYS VAL LYS GLU LEU ARG GLU LYS LEU ASP SEQRES 15 B 377 LYS LEU ARG LYS ALA TYR LEU ILE LEU ALA LEU LEU GLU SEQRES 16 B 377 ALA ALA LYS LYS GLY GLN ILE GLU GLU VAL ARG ARG LEU SEQRES 17 B 377 LEU GLU LEU GLY ALA ASP ALA ASN GLY ALA ASP GLY GLY SEQRES 18 B 377 GLY THR THR PRO LEU HIS LEU ALA ALA THR SER GLY GLN SEQRES 19 B 377 LEU THR ILE VAL GLU ILE LEU LEU ARG GLN GLY ALA ASP SEQRES 20 B 377 VAL ASN ALA ALA ASP ASN THR GLY THR THR PRO LEU HIS SEQRES 21 B 377 LEU ALA ALA TYR SER GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 22 B 377 LEU LEU LYS HIS GLY ALA ASP VAL ASP ALA SER ASP VAL SEQRES 23 B 377 PHE GLY TYR THR PRO LEU HIS LEU ALA ALA TYR TRP GLY SEQRES 24 B 377 HIS LEU GLU ILE VAL GLU VAL LEU LEU LYS ASN GLY ALA SEQRES 25 B 377 ASP VAL ASN ALA MET ASP SER ASP GLY MET THR PRO LEU SEQRES 26 B 377 HIS LEU ALA ALA LYS TRP GLY TYR LEU GLU ILE VAL GLU SEQRES 27 B 377 VAL LEU LEU LYS HIS GLY ALA ASP VAL ASN ALA GLN ASP SEQRES 28 B 377 LYS PHE GLY LYS THR PRO PHE ASP LEU ALA ILE ASP ASN SEQRES 29 B 377 GLY ASN GLU ASP ILE ALA GLU VAL LEU GLN LYS ALA ALA HET GOL A 801 6 HET CO3 A 802 4 HET GOL B 801 6 HET GOL B 802 6 HET CO3 B 803 4 HETNAM GOL GLYCEROL HETNAM CO3 CARBONATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 4 CO3 2(C O3 2-) FORMUL 8 HOH *813(H2 O) HELIX 1 AA1 GLY A 402 GLU A 409 1 8 HELIX 2 AA2 SER A 431 GLU A 439 1 9 HELIX 3 AA3 SER A 441 LEU A 446 1 6 HELIX 4 AA4 ASN A 449 GLN A 454 5 6 HELIX 5 AA5 ASP A 459 ASN A 472 1 14 HELIX 6 AA6 SER A 521 ASN A 565 1 45 HELIX 7 AA7 ASP A 567 GLY A 597 1 31 HELIX 8 AA8 GLN A 598 LEU A 608 1 11 HELIX 9 AA9 THR A 621 GLY A 630 1 10 HELIX 10 AB1 GLN A 631 GLN A 641 1 11 HELIX 11 AB2 THR A 654 SER A 662 1 9 HELIX 12 AB3 HIS A 664 HIS A 674 1 11 HELIX 13 AB4 THR A 687 TRP A 695 1 9 HELIX 14 AB5 HIS A 697 ASN A 707 1 11 HELIX 15 AB6 THR A 720 GLY A 729 1 10 HELIX 16 AB7 TYR A 730 HIS A 740 1 11 HELIX 17 AB8 THR A 753 ASN A 761 1 9 HELIX 18 AB9 ASN A 763 ALA A 773 1 11 HELIX 19 AC1 LEU B 404 GLU B 409 1 6 HELIX 20 AC2 SER B 431 GLU B 439 1 9 HELIX 21 AC3 SER B 441 LEU B 446 1 6 HELIX 22 AC4 ASN B 449 GLN B 454 5 6 HELIX 23 AC5 ASP B 459 ASN B 472 1 14 HELIX 24 AC6 SER B 521 ASN B 565 1 45 HELIX 25 AC7 ASP B 567 GLY B 597 1 31 HELIX 26 AC8 GLN B 598 LEU B 608 1 11 HELIX 27 AC9 THR B 621 GLY B 630 1 10 HELIX 28 AD1 GLN B 631 GLN B 641 1 11 HELIX 29 AD2 THR B 654 GLY B 663 1 10 HELIX 30 AD3 HIS B 664 HIS B 674 1 11 HELIX 31 AD4 THR B 687 TRP B 695 1 9 HELIX 32 AD5 HIS B 697 ASN B 707 1 11 HELIX 33 AD6 THR B 720 GLY B 729 1 10 HELIX 34 AD7 TYR B 730 HIS B 740 1 11 HELIX 35 AD8 THR B 753 ASN B 761 1 9 HELIX 36 AD9 ASN B 763 ALA B 773 1 11 SHEET 1 AA1 5 ILE A 427 ALA A 430 0 SHEET 2 AA1 5 PHE A 415 THR A 418 -1 N ILE A 417 O ILE A 428 SHEET 3 AA1 5 VAL A 506 ASP A 515 -1 O GLY A 511 N VAL A 416 SHEET 4 AA1 5 LYS A 489 ARG A 500 -1 N GLN A 497 O ILE A 510 SHEET 5 AA1 5 VAL A 476 TYR A 483 -1 N VAL A 478 O PHE A 494 SHEET 1 AA2 5 ILE B 427 ALA B 430 0 SHEET 2 AA2 5 PHE B 415 THR B 418 -1 N ILE B 417 O ILE B 428 SHEET 3 AA2 5 VAL B 506 ASP B 515 -1 O GLY B 511 N VAL B 416 SHEET 4 AA2 5 LYS B 489 ARG B 500 -1 N LEU B 499 O TYR B 508 SHEET 5 AA2 5 VAL B 476 TYR B 483 -1 N VAL B 478 O PHE B 494 CRYST1 150.614 84.367 92.992 90.00 115.73 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006639 0.000000 0.003200 0.00000 SCALE2 0.000000 0.011853 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011937 0.00000