HEADER MEMBRANE PROTEIN 30-DEC-21 7TD1 TITLE LYSOPHOSPHATIDIC ACID RECEPTOR 1-GI COMPLEX BOUND TO LPA, STATE A COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOPHOSPHATIDIC ACID RECEPTOR 1; COMPND 3 CHAIN: R; COMPND 4 SYNONYM: LPA RECEPTOR 1,LPA-1,LYSOPHOSPHATIDIC ACID RECEPTOR EDG-2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT COMPND 8 BETA-1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: TRANSDUCIN BETA CHAIN 1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1; COMPND 14 CHAIN: A; COMPND 15 SYNONYM: ADENYLATE CYCLASE-INHIBITING G ALPHA PROTEIN; COMPND 16 ENGINEERED: YES; COMPND 17 MUTATION: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT COMPND 20 GAMMA-2; COMPND 21 CHAIN: G; COMPND 22 SYNONYM: G GAMMA-I; COMPND 23 ENGINEERED: YES; COMPND 24 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LPAR1, EDG2, LPA1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 10 ORGANISM_COMMON: CATTLE; SOURCE 11 ORGANISM_TAXID: 9913; SOURCE 12 GENE: GNB1; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 17 ORGANISM_COMMON: NORWAY RAT; SOURCE 18 ORGANISM_TAXID: 10116; SOURCE 19 GENE: GNAI1, GNAI-1; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 24 ORGANISM_COMMON: CATTLE; SOURCE 25 ORGANISM_TAXID: 9913; SOURCE 26 GENE: GNG2; SOURCE 27 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GPCR, COMPLEX, LIPID, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR S.LIU,N.PAKNEJAD,L.ZHU,Y.KIHARA,D.RAY,J.CHUN,W.LIU,R.K.HITE,X.Y.HUANG REVDAT 3 23-OCT-24 7TD1 1 REMARK REVDAT 2 23-FEB-22 7TD1 1 JRNL REVDAT 1 09-FEB-22 7TD1 0 JRNL AUTH S.LIU,N.PAKNEJAD,L.ZHU,Y.KIHARA,M.RAY,J.CHUN,W.LIU,R.K.HITE, JRNL AUTH 2 X.Y.HUANG JRNL TITL DIFFERENTIAL ACTIVATION MECHANISMS OF LIPID GPCRS BY JRNL TITL 2 LYSOPHOSPHATIDIC ACID AND SPHINGOSINE 1-PHOSPHATE. JRNL REF NAT COMMUN V. 13 731 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35136060 JRNL DOI 10.1038/S41467-022-28417-2 REMARK 2 REMARK 2 RESOLUTION. 3.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.080 REMARK 3 NUMBER OF PARTICLES : 31567 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7TD1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262072. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF LYSOPHOSPHATIDIC REMARK 245 ACID RECEPTOR 1 WITH G-PROTEIN REMARK 245 AND LPA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2820.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, B, A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP R -9 REMARK 465 TYR R -8 REMARK 465 LYS R -7 REMARK 465 ASP R -6 REMARK 465 ASP R -5 REMARK 465 ASP R -4 REMARK 465 ASP R -3 REMARK 465 LYS R -2 REMARK 465 ALA R -1 REMARK 465 ALA R 0 REMARK 465 ALA R 1 REMARK 465 ALA R 2 REMARK 465 ALA R 3 REMARK 465 ILE R 4 REMARK 465 SER R 5 REMARK 465 THR R 6 REMARK 465 SER R 7 REMARK 465 ILE R 8 REMARK 465 PRO R 9 REMARK 465 VAL R 10 REMARK 465 ILE R 11 REMARK 465 SER R 12 REMARK 465 GLN R 13 REMARK 465 PRO R 14 REMARK 465 GLN R 15 REMARK 465 PHE R 16 REMARK 465 THR R 17 REMARK 465 ALA R 18 REMARK 465 MET R 19 REMARK 465 ASN R 20 REMARK 465 GLU R 21 REMARK 465 PRO R 22 REMARK 465 HIS R 242 REMARK 465 SER R 243 REMARK 465 SER R 244 REMARK 465 GLY R 245 REMARK 465 PRO R 246 REMARK 465 ARG R 247 REMARK 465 ARG R 248 REMARK 465 ASN R 249 REMARK 465 GLN R 324 REMARK 465 ILE R 325 REMARK 465 LEU R 326 REMARK 465 CYS R 327 REMARK 465 CYS R 328 REMARK 465 GLN R 329 REMARK 465 ARG R 330 REMARK 465 SER R 331 REMARK 465 GLU R 332 REMARK 465 ASN R 333 REMARK 465 PRO R 334 REMARK 465 THR R 335 REMARK 465 GLY R 336 REMARK 465 PRO R 337 REMARK 465 THR R 338 REMARK 465 GLU R 339 REMARK 465 GLY R 340 REMARK 465 MET B 1 REMARK 465 MET A -24 REMARK 465 GLY A -23 REMARK 465 SER A -22 REMARK 465 SER A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 LEU A -11 REMARK 465 GLU A -10 REMARK 465 VAL A -9 REMARK 465 LEU A -8 REMARK 465 PHE A -7 REMARK 465 GLN A -6 REMARK 465 GLY A -5 REMARK 465 PRO A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 THR A 4 REMARK 465 LEU A 5 REMARK 465 ILE A 55 REMARK 465 ILE A 56 REMARK 465 HIS A 57 REMARK 465 GLU A 58 REMARK 465 ALA A 59 REMARK 465 GLY A 60 REMARK 465 TYR A 61 REMARK 465 SER A 62 REMARK 465 GLU A 63 REMARK 465 GLU A 64 REMARK 465 GLU A 65 REMARK 465 CYS A 66 REMARK 465 LYS A 67 REMARK 465 GLN A 68 REMARK 465 TYR A 69 REMARK 465 LYS A 70 REMARK 465 ALA A 71 REMARK 465 VAL A 72 REMARK 465 VAL A 73 REMARK 465 TYR A 74 REMARK 465 SER A 75 REMARK 465 ASN A 76 REMARK 465 THR A 77 REMARK 465 ILE A 78 REMARK 465 GLN A 79 REMARK 465 SER A 80 REMARK 465 ILE A 81 REMARK 465 ILE A 82 REMARK 465 ALA A 83 REMARK 465 ILE A 84 REMARK 465 ILE A 85 REMARK 465 ARG A 86 REMARK 465 ALA A 87 REMARK 465 MET A 88 REMARK 465 GLY A 89 REMARK 465 ARG A 90 REMARK 465 LEU A 91 REMARK 465 LYS A 92 REMARK 465 ILE A 93 REMARK 465 ASP A 94 REMARK 465 PHE A 95 REMARK 465 GLY A 96 REMARK 465 ASP A 97 REMARK 465 SER A 98 REMARK 465 ALA A 99 REMARK 465 ARG A 100 REMARK 465 ALA A 101 REMARK 465 ASP A 102 REMARK 465 ASP A 103 REMARK 465 ALA A 104 REMARK 465 ARG A 105 REMARK 465 GLN A 106 REMARK 465 LEU A 107 REMARK 465 PHE A 108 REMARK 465 VAL A 109 REMARK 465 LEU A 110 REMARK 465 ALA A 111 REMARK 465 GLY A 112 REMARK 465 ALA A 113 REMARK 465 ALA A 114 REMARK 465 GLU A 115 REMARK 465 GLU A 116 REMARK 465 GLY A 117 REMARK 465 PHE A 118 REMARK 465 MET A 119 REMARK 465 THR A 120 REMARK 465 ALA A 121 REMARK 465 GLU A 122 REMARK 465 LEU A 123 REMARK 465 ALA A 124 REMARK 465 GLY A 125 REMARK 465 VAL A 126 REMARK 465 ILE A 127 REMARK 465 LYS A 128 REMARK 465 ARG A 129 REMARK 465 LEU A 130 REMARK 465 TRP A 131 REMARK 465 LYS A 132 REMARK 465 ASP A 133 REMARK 465 SER A 134 REMARK 465 GLY A 135 REMARK 465 VAL A 136 REMARK 465 GLN A 137 REMARK 465 ALA A 138 REMARK 465 CYS A 139 REMARK 465 PHE A 140 REMARK 465 ASN A 141 REMARK 465 ARG A 142 REMARK 465 SER A 143 REMARK 465 ARG A 144 REMARK 465 GLU A 145 REMARK 465 TYR A 146 REMARK 465 GLN A 147 REMARK 465 LEU A 148 REMARK 465 ASN A 149 REMARK 465 ASP A 150 REMARK 465 SER A 151 REMARK 465 ALA A 152 REMARK 465 ALA A 153 REMARK 465 TYR A 154 REMARK 465 TYR A 155 REMARK 465 LEU A 156 REMARK 465 ASN A 157 REMARK 465 ASP A 158 REMARK 465 LEU A 159 REMARK 465 ASP A 160 REMARK 465 ARG A 161 REMARK 465 ILE A 162 REMARK 465 ALA A 163 REMARK 465 GLN A 164 REMARK 465 PRO A 165 REMARK 465 ASN A 166 REMARK 465 TYR A 167 REMARK 465 ILE A 168 REMARK 465 PRO A 169 REMARK 465 THR A 170 REMARK 465 GLN A 171 REMARK 465 GLN A 172 REMARK 465 ASP A 173 REMARK 465 VAL A 174 REMARK 465 LEU A 175 REMARK 465 ARG A 176 REMARK 465 THR A 177 REMARK 465 ARG A 178 REMARK 465 VAL A 179 REMARK 465 LYS A 180 REMARK 465 THR A 181 REMARK 465 ALA A 235 REMARK 465 GLU A 236 REMARK 465 ASP A 237 REMARK 465 GLU A 238 REMARK 465 MET G 1 REMARK 465 ALA G 2 REMARK 465 SER G 3 REMARK 465 ASN G 4 REMARK 465 ASN G 5 REMARK 465 THR G 6 REMARK 465 ALA G 7 REMARK 465 LYS G 64 REMARK 465 LYS G 65 REMARK 465 PHE G 66 REMARK 465 PHE G 67 REMARK 465 SER G 68 REMARK 465 ALA G 69 REMARK 465 ILE G 70 REMARK 465 LEU G 71 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU R 44 CG CD OE1 OE2 REMARK 470 ARG R 79 CG CD NE CZ NH1 NH2 REMARK 470 ARG R 158 CG CD NE CZ NH1 NH2 REMARK 470 MET R 159 CG SD CE REMARK 470 SER R 160 OG REMARK 470 ASN R 161 CG OD1 ND2 REMARK 470 ARG R 162 CG CD NE CZ NH1 NH2 REMARK 470 ARG R 163 CG CD NE CZ NH1 NH2 REMARK 470 MET R 174 CG SD CE REMARK 470 ARG R 241 CG CD NE CZ NH1 NH2 REMARK 470 ARG R 250 CG CD NE CZ NH1 NH2 REMARK 470 GLN R 286 CG CD OE1 NE2 REMARK 470 GLU R 293 CG CD OE1 OE2 REMARK 470 LYS R 316 CG CD CE NZ REMARK 470 GLU R 317 CG CD OE1 OE2 REMARK 470 SER B 2 OG REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 ASP B 5 CG OD1 OD2 REMARK 470 GLN B 6 CG CD OE1 NE2 REMARK 470 LEU B 7 CG CD1 CD2 REMARK 470 ARG B 8 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 9 CG CD OE1 NE2 REMARK 470 GLU B 10 CG CD OE1 OE2 REMARK 470 GLU B 12 CG CD OE1 OE2 REMARK 470 GLN B 13 CG CD OE1 NE2 REMARK 470 LYS B 15 CG CD CE NZ REMARK 470 ASN B 16 CG OD1 ND2 REMARK 470 GLN B 17 CG CD OE1 NE2 REMARK 470 ASP B 20 CG OD1 OD2 REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 ASP B 38 CG OD1 OD2 REMARK 470 ARG B 46 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 172 CG CD OE1 OE2 REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 215 CG CD OE1 OE2 REMARK 470 MET B 217 CG SD CE REMARK 470 LYS B 301 CG CD CE NZ REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 ASP A 193 CG OD1 OD2 REMARK 470 ARG A 205 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 LEU A 234 CG CD1 CD2 REMARK 470 MET A 240 CG SD CE REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 ASP A 309 CG OD1 OD2 REMARK 470 THR A 327 OG1 CG2 REMARK 470 ASP A 328 CG OD1 OD2 REMARK 470 SER G 8 OG REMARK 470 ILE G 9 CG1 CG2 CD1 REMARK 470 GLN G 11 CG CD OE1 NE2 REMARK 470 ARG G 13 CG CD NE CZ NH1 NH2 REMARK 470 LEU G 15 CG CD1 CD2 REMARK 470 GLU G 17 CG CD OE1 OE2 REMARK 470 LEU G 19 CG CD1 CD2 REMARK 470 LYS G 20 CG CD CE NZ REMARK 470 GLU G 22 CG CD OE1 OE2 REMARK 470 ASN G 24 CG OD1 ND2 REMARK 470 LYS G 29 CG CD CE NZ REMARK 470 LYS G 32 CG CD CE NZ REMARK 470 ASP G 36 CG OD1 OD2 REMARK 470 GLU G 42 CG CD OE1 OE2 REMARK 470 LYS G 46 CG CD CE NZ REMARK 470 GLU G 58 CG CD OE1 OE2 REMARK 470 ARG G 62 CG CD NE CZ NH1 NH2 REMARK 470 GLU G 63 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG B 137 O ILE B 171 2.17 REMARK 500 O ILE R 268 OG1 THR R 272 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE R 107 -2.51 77.08 REMARK 500 THR R 157 52.98 37.20 REMARK 500 GLN R 286 -4.67 76.72 REMARK 500 THR B 87 47.91 39.04 REMARK 500 ALA B 104 143.60 -171.50 REMARK 500 SER B 227 -168.83 -161.32 REMARK 500 ARG A 32 33.84 -99.69 REMARK 500 ALA A 41 -168.47 -79.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-25820 RELATED DB: EMDB REMARK 900 LYSOPHOSPHATIDIC ACID RECEPTOR 1-GI COMPLEX BOUND TO LPA, STATE A DBREF 7TD1 R 2 340 UNP Q92633 LPAR1_HUMAN 2 340 DBREF 7TD1 B 1 340 UNP P62871 GBB1_BOVIN 1 340 DBREF 7TD1 A 1 354 UNP B2RSH2 GNAI1_MOUSE 1 354 DBREF 7TD1 G 1 71 UNP P63212 GBG2_BOVIN 1 71 SEQADV 7TD1 ASP R -9 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 TYR R -8 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 LYS R -7 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ASP R -6 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ASP R -5 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ASP R -4 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ASP R -3 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 LYS R -2 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ALA R -1 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ALA R 0 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 ALA R 1 UNP Q92633 EXPRESSION TAG SEQADV 7TD1 MET A -24 UNP B2RSH2 INITIATING METHIONINE SEQADV 7TD1 GLY A -23 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 SER A -22 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 SER A -21 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -20 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -19 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -18 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -17 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -16 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -15 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 SER A -14 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 SER A -13 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 GLY A -12 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 LEU A -11 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 GLU A -10 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 VAL A -9 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 LEU A -8 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 PHE A -7 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 GLN A -6 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 GLY A -5 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 PRO A -4 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 HIS A -3 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 MET A -2 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 ALA A -1 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 SER A 0 UNP B2RSH2 EXPRESSION TAG SEQADV 7TD1 ALA A 203 UNP B2RSH2 GLY 203 ENGINEERED MUTATION SEQADV 7TD1 SER G 68 UNP P63212 CYS 68 ENGINEERED MUTATION SEQRES 1 R 350 ASP TYR LYS ASP ASP ASP ASP LYS ALA ALA ALA ALA ALA SEQRES 2 R 350 ILE SER THR SER ILE PRO VAL ILE SER GLN PRO GLN PHE SEQRES 3 R 350 THR ALA MET ASN GLU PRO GLN CYS PHE TYR ASN GLU SER SEQRES 4 R 350 ILE ALA PHE PHE TYR ASN ARG SER GLY LYS HIS LEU ALA SEQRES 5 R 350 THR GLU TRP ASN THR VAL SER LYS LEU VAL MET GLY LEU SEQRES 6 R 350 GLY ILE THR VAL CYS ILE PHE ILE MET LEU ALA ASN LEU SEQRES 7 R 350 LEU VAL MET VAL ALA ILE TYR VAL ASN ARG ARG PHE HIS SEQRES 8 R 350 PHE PRO ILE TYR TYR LEU MET ALA ASN LEU ALA ALA ALA SEQRES 9 R 350 ASP PHE PHE ALA GLY LEU ALA TYR PHE TYR LEU MET PHE SEQRES 10 R 350 ASN THR GLY PRO ASN THR ARG ARG LEU THR VAL SER THR SEQRES 11 R 350 TRP LEU LEU ARG GLN GLY LEU ILE ASP THR SER LEU THR SEQRES 12 R 350 ALA SER VAL ALA ASN LEU LEU ALA ILE ALA ILE GLU ARG SEQRES 13 R 350 HIS ILE THR VAL PHE ARG MET GLN LEU HIS THR ARG MET SEQRES 14 R 350 SER ASN ARG ARG VAL VAL VAL VAL ILE VAL VAL ILE TRP SEQRES 15 R 350 THR MET ALA ILE VAL MET GLY ALA ILE PRO SER VAL GLY SEQRES 16 R 350 TRP ASN CYS ILE CYS ASP ILE GLU ASN CYS SER ASN MET SEQRES 17 R 350 ALA PRO LEU TYR SER ASP SER TYR LEU VAL PHE TRP ALA SEQRES 18 R 350 ILE PHE ASN LEU VAL THR PHE VAL VAL MET VAL VAL LEU SEQRES 19 R 350 TYR ALA HIS ILE PHE GLY TYR VAL ARG GLN ARG THR MET SEQRES 20 R 350 ARG MET SER ARG HIS SER SER GLY PRO ARG ARG ASN ARG SEQRES 21 R 350 ASP THR MET MET SER LEU LEU LYS THR VAL VAL ILE VAL SEQRES 22 R 350 LEU GLY ALA PHE ILE ILE CYS TRP THR PRO GLY LEU VAL SEQRES 23 R 350 LEU LEU LEU LEU ASP VAL CYS CYS PRO GLN CYS ASP VAL SEQRES 24 R 350 LEU ALA TYR GLU LYS PHE PHE LEU LEU LEU ALA GLU PHE SEQRES 25 R 350 ASN SER ALA MET ASN PRO ILE ILE TYR SER TYR ARG ASP SEQRES 26 R 350 LYS GLU MET SER ALA THR PHE ARG GLN ILE LEU CYS CYS SEQRES 27 R 350 GLN ARG SER GLU ASN PRO THR GLY PRO THR GLU GLY SEQRES 1 B 340 MET SER GLU LEU ASP GLN LEU ARG GLN GLU ALA GLU GLN SEQRES 2 B 340 LEU LYS ASN GLN ILE ARG ASP ALA ARG LYS ALA CYS ALA SEQRES 3 B 340 ASP ALA THR LEU SER GLN ILE THR ASN ASN ILE ASP PRO SEQRES 4 B 340 VAL GLY ARG ILE GLN MET ARG THR ARG ARG THR LEU ARG SEQRES 5 B 340 GLY HIS LEU ALA LYS ILE TYR ALA MET HIS TRP GLY THR SEQRES 6 B 340 ASP SER ARG LEU LEU VAL SER ALA SER GLN ASP GLY LYS SEQRES 7 B 340 LEU ILE ILE TRP ASP SER TYR THR THR ASN LYS VAL HIS SEQRES 8 B 340 ALA ILE PRO LEU ARG SER SER TRP VAL MET THR CYS ALA SEQRES 9 B 340 TYR ALA PRO SER GLY ASN TYR VAL ALA CYS GLY GLY LEU SEQRES 10 B 340 ASP ASN ILE CYS SER ILE TYR ASN LEU LYS THR ARG GLU SEQRES 11 B 340 GLY ASN VAL ARG VAL SER ARG GLU LEU ALA GLY HIS THR SEQRES 12 B 340 GLY TYR LEU SER CYS CYS ARG PHE LEU ASP ASP ASN GLN SEQRES 13 B 340 ILE VAL THR SER SER GLY ASP THR THR CYS ALA LEU TRP SEQRES 14 B 340 ASP ILE GLU THR GLY GLN GLN THR THR THR PHE THR GLY SEQRES 15 B 340 HIS THR GLY ASP VAL MET SER LEU SER LEU ALA PRO ASP SEQRES 16 B 340 THR ARG LEU PHE VAL SER GLY ALA CYS ASP ALA SER ALA SEQRES 17 B 340 LYS LEU TRP ASP VAL ARG GLU GLY MET CYS ARG GLN THR SEQRES 18 B 340 PHE THR GLY HIS GLU SER ASP ILE ASN ALA ILE CYS PHE SEQRES 19 B 340 PHE PRO ASN GLY ASN ALA PHE ALA THR GLY SER ASP ASP SEQRES 20 B 340 ALA THR CYS ARG LEU PHE ASP LEU ARG ALA ASP GLN GLU SEQRES 21 B 340 LEU MET THR TYR SER HIS ASP ASN ILE ILE CYS GLY ILE SEQRES 22 B 340 THR SER VAL SER PHE SER LYS SER GLY ARG LEU LEU LEU SEQRES 23 B 340 ALA GLY TYR ASP ASP PHE ASN CYS ASN VAL TRP ASP ALA SEQRES 24 B 340 LEU LYS ALA ASP ARG ALA GLY VAL LEU ALA GLY HIS ASP SEQRES 25 B 340 ASN ARG VAL SER CYS LEU GLY VAL THR ASP ASP GLY MET SEQRES 26 B 340 ALA VAL ALA THR GLY SER TRP ASP SER PHE LEU LYS ILE SEQRES 27 B 340 TRP ASN SEQRES 1 A 379 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 379 LEU GLU VAL LEU PHE GLN GLY PRO HIS MET ALA SER MET SEQRES 3 A 379 GLY CYS THR LEU SER ALA GLU ASP LYS ALA ALA VAL GLU SEQRES 4 A 379 ARG SER LYS MET ILE ASP ARG ASN LEU ARG GLU ASP GLY SEQRES 5 A 379 GLU LYS ALA ALA ARG GLU VAL LYS LEU LEU LEU LEU GLY SEQRES 6 A 379 ALA GLY GLU SER GLY LYS SER THR ILE VAL LYS GLN MET SEQRES 7 A 379 LYS ILE ILE HIS GLU ALA GLY TYR SER GLU GLU GLU CYS SEQRES 8 A 379 LYS GLN TYR LYS ALA VAL VAL TYR SER ASN THR ILE GLN SEQRES 9 A 379 SER ILE ILE ALA ILE ILE ARG ALA MET GLY ARG LEU LYS SEQRES 10 A 379 ILE ASP PHE GLY ASP SER ALA ARG ALA ASP ASP ALA ARG SEQRES 11 A 379 GLN LEU PHE VAL LEU ALA GLY ALA ALA GLU GLU GLY PHE SEQRES 12 A 379 MET THR ALA GLU LEU ALA GLY VAL ILE LYS ARG LEU TRP SEQRES 13 A 379 LYS ASP SER GLY VAL GLN ALA CYS PHE ASN ARG SER ARG SEQRES 14 A 379 GLU TYR GLN LEU ASN ASP SER ALA ALA TYR TYR LEU ASN SEQRES 15 A 379 ASP LEU ASP ARG ILE ALA GLN PRO ASN TYR ILE PRO THR SEQRES 16 A 379 GLN GLN ASP VAL LEU ARG THR ARG VAL LYS THR THR GLY SEQRES 17 A 379 ILE VAL GLU THR HIS PHE THR PHE LYS ASP LEU HIS PHE SEQRES 18 A 379 LYS MET PHE ASP VAL GLY ALA GLN ARG SER GLU ARG LYS SEQRES 19 A 379 LYS TRP ILE HIS CYS PHE GLU GLY VAL THR ALA ILE ILE SEQRES 20 A 379 PHE CYS VAL ALA LEU SER ASP TYR ASP LEU VAL LEU ALA SEQRES 21 A 379 GLU ASP GLU GLU MET ASN ARG MET HIS GLU SER MET LYS SEQRES 22 A 379 LEU PHE ASP SER ILE CYS ASN ASN LYS TRP PHE THR ASP SEQRES 23 A 379 THR SER ILE ILE LEU PHE LEU ASN LYS LYS ASP LEU PHE SEQRES 24 A 379 GLU GLU LYS ILE LYS LYS SER PRO LEU THR ILE CYS TYR SEQRES 25 A 379 PRO GLU TYR ALA GLY SER ASN THR TYR GLU GLU ALA ALA SEQRES 26 A 379 ALA TYR ILE GLN CYS GLN PHE GLU ASP LEU ASN LYS ARG SEQRES 27 A 379 LYS ASP THR LYS GLU ILE TYR THR HIS PHE THR CYS ALA SEQRES 28 A 379 THR ASP THR LYS ASN VAL GLN PHE VAL PHE ASP ALA VAL SEQRES 29 A 379 THR ASP VAL ILE ILE LYS ASN ASN LEU LYS ASP CYS GLY SEQRES 30 A 379 LEU PHE SEQRES 1 G 71 MET ALA SER ASN ASN THR ALA SER ILE ALA GLN ALA ARG SEQRES 2 G 71 LYS LEU VAL GLU GLN LEU LYS MET GLU ALA ASN ILE ASP SEQRES 3 G 71 ARG ILE LYS VAL SER LYS ALA ALA ALA ASP LEU MET ALA SEQRES 4 G 71 TYR CYS GLU ALA HIS ALA LYS GLU ASP PRO LEU LEU THR SEQRES 5 G 71 PRO VAL PRO ALA SER GLU ASN PRO PHE ARG GLU LYS LYS SEQRES 6 G 71 PHE PHE SER ALA ILE LEU HET NKP R 401 68 HETNAM NKP (2R)-2-HYDROXY-3-(PHOSPHONOOXY)PROPYL (9E)-OCTADEC-9- HETNAM 2 NKP ENOATE HETSYN NKP 18:1 LPA; OLEOYL LYSOPHOSPHATIDIC ACID FORMUL 5 NKP C21 H41 O7 P HELIX 1 AA1 SER R 29 SER R 37 1 9 HELIX 2 AA2 ASN R 46 ASN R 77 1 32 HELIX 3 AA3 PHE R 82 MET R 106 1 25 HELIX 4 AA4 THR R 109 LEU R 116 5 8 HELIX 5 AA5 THR R 117 ARG R 152 1 36 HELIX 6 AA6 ARG R 162 ILE R 181 1 20 HELIX 7 AA7 SER R 203 ARG R 241 1 39 HELIX 8 AA8 ASP R 251 CYS R 284 1 34 HELIX 9 AA9 ASP R 288 ALA R 291 5 4 HELIX 10 AB1 TYR R 292 TYR R 311 1 20 HELIX 11 AB2 ASP R 315 PHE R 322 1 8 HELIX 12 AB3 GLU B 3 ALA B 26 1 24 HELIX 13 AB4 THR B 29 THR B 34 1 6 HELIX 14 AB5 GLU A 8 ALA A 31 1 24 HELIX 15 AB6 GLY A 45 LYS A 54 1 10 HELIX 16 AB7 GLU A 207 ILE A 212 1 6 HELIX 17 AB8 HIS A 213 GLU A 216 5 4 HELIX 18 AB9 SER A 228 ASP A 231 5 4 HELIX 19 AC1 ASN A 241 ASN A 255 1 15 HELIX 20 AC2 LYS A 270 ILE A 278 1 9 HELIX 21 AC3 PRO A 282 CYS A 286 5 5 HELIX 22 AC4 THR A 295 LEU A 310 1 16 HELIX 23 AC5 LYS A 330 CYS A 351 1 22 HELIX 24 AC6 ILE G 9 ASN G 24 1 16 HELIX 25 AC7 LYS G 29 HIS G 44 1 16 HELIX 26 AC8 ALA G 45 ASP G 48 5 4 SHEET 1 AA1 4 THR B 47 LEU B 51 0 SHEET 2 AA1 4 LEU B 336 TRP B 339 -1 O ILE B 338 N ARG B 49 SHEET 3 AA1 4 VAL B 327 SER B 331 -1 N THR B 329 O LYS B 337 SHEET 4 AA1 4 VAL B 315 VAL B 320 -1 N CYS B 317 O GLY B 330 SHEET 1 AA2 4 ILE B 58 TRP B 63 0 SHEET 2 AA2 4 LEU B 69 SER B 74 -1 O ALA B 73 N ALA B 60 SHEET 3 AA2 4 LYS B 78 ASP B 83 -1 O TRP B 82 N LEU B 70 SHEET 4 AA2 4 HIS B 91 PRO B 94 -1 O ILE B 93 N LEU B 79 SHEET 1 AA3 4 VAL B 100 TYR B 105 0 SHEET 2 AA3 4 TYR B 111 GLY B 116 -1 O GLY B 115 N MET B 101 SHEET 3 AA3 4 CYS B 121 ASN B 125 -1 O TYR B 124 N VAL B 112 SHEET 4 AA3 4 VAL B 135 LEU B 139 -1 O ARG B 137 N ILE B 123 SHEET 1 AA4 4 LEU B 146 ARG B 150 0 SHEET 2 AA4 4 VAL B 158 SER B 161 -1 O SER B 160 N SER B 147 SHEET 3 AA4 4 THR B 165 TRP B 169 -1 O ALA B 167 N THR B 159 SHEET 4 AA4 4 GLN B 176 THR B 181 -1 O PHE B 180 N CYS B 166 SHEET 1 AA5 4 VAL B 187 LEU B 192 0 SHEET 2 AA5 4 LEU B 198 ALA B 203 -1 O GLY B 202 N MET B 188 SHEET 3 AA5 4 SER B 207 ASP B 212 -1 O TRP B 211 N PHE B 199 SHEET 4 AA5 4 CYS B 218 THR B 223 -1 O ARG B 219 N LEU B 210 SHEET 1 AA6 4 ILE B 229 PHE B 234 0 SHEET 2 AA6 4 ALA B 240 SER B 245 -1 O ALA B 242 N CYS B 233 SHEET 3 AA6 4 CYS B 250 ASP B 254 -1 O PHE B 253 N PHE B 241 SHEET 4 AA6 4 GLN B 259 TYR B 264 -1 O TYR B 264 N CYS B 250 SHEET 1 AA7 4 ILE B 273 PHE B 278 0 SHEET 2 AA7 4 LEU B 285 TYR B 289 -1 O GLY B 288 N SER B 275 SHEET 3 AA7 4 CYS B 294 VAL B 296 -1 O ASN B 295 N ALA B 287 SHEET 4 AA7 4 GLY B 306 LEU B 308 -1 O LEU B 308 N CYS B 294 SHEET 1 AA8 6 VAL A 185 PHE A 191 0 SHEET 2 AA8 6 LEU A 194 ASP A 200 -1 O LEU A 194 N PHE A 191 SHEET 3 AA8 6 GLU A 33 GLY A 40 1 N LEU A 38 O PHE A 199 SHEET 4 AA8 6 ALA A 220 ALA A 226 1 O ILE A 222 N LEU A 39 SHEET 5 AA8 6 SER A 263 ASN A 269 1 O ILE A 265 N ILE A 221 SHEET 6 AA8 6 ILE A 319 PHE A 323 1 O TYR A 320 N LEU A 266 SSBOND 1 CYS R 24 CYS R 190 1555 1555 2.04 SSBOND 2 CYS R 188 CYS R 195 1555 1555 2.18 SSBOND 3 CYS R 284 CYS R 287 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000