data_7TGG # _entry.id 7TGG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7TGG pdb_00007tgg 10.2210/pdb7tgg/pdb WWPDB D_1000262243 ? ? EMDB EMD-25881 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of PilA-N and PilA-C from Geobacter sulfurreducens' _pdbx_database_related.db_id EMD-25881 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7TGG _pdbx_database_status.recvd_initial_deposition_date 2022-01-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, F.' 1 ? 'Mustafa, K.' 2 ? 'Chan, C.H.' 3 ? 'Joshi, K.' 4 ? 'Bond, D.R.' 5 ? 'Hochbaum, A.I.' 6 ? 'Egelman, E.H.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Microbiol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2058-5276 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 1291 _citation.page_last 1300 _citation.title 'Cryo-EM structure of an extracellular Geobacter OmcE cytochrome filament reveals tetrahaem packing.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41564-022-01159-z _citation.pdbx_database_id_PubMed 35798889 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, F.' 1 ? primary 'Mustafa, K.' 2 ? primary 'Suciu, V.' 3 0000-0003-2335-2650 primary 'Joshi, K.' 4 ? primary 'Chan, C.H.' 5 ? primary 'Choi, S.' 6 0000-0002-0033-0734 primary 'Su, Z.' 7 0000-0001-6495-3351 primary 'Si, D.' 8 0000-0001-7039-2589 primary 'Hochbaum, A.I.' 9 0000-0002-5377-8065 primary 'Egelman, E.H.' 10 0000-0003-4844-5212 primary 'Bond, D.R.' 11 0000-0001-8083-7107 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7TGG _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TGG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Geopilin domain 1 protein' 10006.582 1 ? ? ? ? 2 polymer nat 'Geopilin domain 2 protein' 13087.543 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKAYNSAASSDLRNLKTALESAF ADDQTYPPES ; ;MANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKAYNSAASSDLRNLKTALESAF ADDQTYPPES ; A ? 2 'polypeptide(L)' no no ;MKKIITIVAMLLAMQGIAIAAGKIPTTTMGGKDFTFKPSTNVSVSYFTTNGATSTAGTVNTDYAVNTKNSSGNRVFTSTN NTSNIWYIENDAWKGKAVSDSDVTALGTGDVGKSDFSGTEWKSQ ; ;MKKIITIVAMLLAMQGIAIAAGKIPTTTMGGKDFTFKPSTNVSVSYFTTNGATSTAGTVNTDYAVNTKNSSGNRVFTSTN NTSNIWYIENDAWKGKAVSDSDVTALGTGDVGKSDFSGTEWKSQ ; a ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ASN n 1 4 TYR n 1 5 PRO n 1 6 HIS n 1 7 THR n 1 8 PRO n 1 9 THR n 1 10 GLN n 1 11 ALA n 1 12 ALA n 1 13 LYS n 1 14 ARG n 1 15 ARG n 1 16 LYS n 1 17 GLU n 1 18 THR n 1 19 LEU n 1 20 MET n 1 21 LEU n 1 22 GLN n 1 23 LYS n 1 24 LEU n 1 25 ARG n 1 26 ASN n 1 27 ARG n 1 28 LYS n 1 29 GLY n 1 30 PHE n 1 31 THR n 1 32 LEU n 1 33 ILE n 1 34 GLU n 1 35 LEU n 1 36 LEU n 1 37 ILE n 1 38 VAL n 1 39 VAL n 1 40 ALA n 1 41 ILE n 1 42 ILE n 1 43 GLY n 1 44 ILE n 1 45 LEU n 1 46 ALA n 1 47 ALA n 1 48 ILE n 1 49 ALA n 1 50 ILE n 1 51 PRO n 1 52 GLN n 1 53 PHE n 1 54 SER n 1 55 ALA n 1 56 TYR n 1 57 ARG n 1 58 VAL n 1 59 LYS n 1 60 ALA n 1 61 TYR n 1 62 ASN n 1 63 SER n 1 64 ALA n 1 65 ALA n 1 66 SER n 1 67 SER n 1 68 ASP n 1 69 LEU n 1 70 ARG n 1 71 ASN n 1 72 LEU n 1 73 LYS n 1 74 THR n 1 75 ALA n 1 76 LEU n 1 77 GLU n 1 78 SER n 1 79 ALA n 1 80 PHE n 1 81 ALA n 1 82 ASP n 1 83 ASP n 1 84 GLN n 1 85 THR n 1 86 TYR n 1 87 PRO n 1 88 PRO n 1 89 GLU n 1 90 SER n 2 1 MET n 2 2 LYS n 2 3 LYS n 2 4 ILE n 2 5 ILE n 2 6 THR n 2 7 ILE n 2 8 VAL n 2 9 ALA n 2 10 MET n 2 11 LEU n 2 12 LEU n 2 13 ALA n 2 14 MET n 2 15 GLN n 2 16 GLY n 2 17 ILE n 2 18 ALA n 2 19 ILE n 2 20 ALA n 2 21 ALA n 2 22 GLY n 2 23 LYS n 2 24 ILE n 2 25 PRO n 2 26 THR n 2 27 THR n 2 28 THR n 2 29 MET n 2 30 GLY n 2 31 GLY n 2 32 LYS n 2 33 ASP n 2 34 PHE n 2 35 THR n 2 36 PHE n 2 37 LYS n 2 38 PRO n 2 39 SER n 2 40 THR n 2 41 ASN n 2 42 VAL n 2 43 SER n 2 44 VAL n 2 45 SER n 2 46 TYR n 2 47 PHE n 2 48 THR n 2 49 THR n 2 50 ASN n 2 51 GLY n 2 52 ALA n 2 53 THR n 2 54 SER n 2 55 THR n 2 56 ALA n 2 57 GLY n 2 58 THR n 2 59 VAL n 2 60 ASN n 2 61 THR n 2 62 ASP n 2 63 TYR n 2 64 ALA n 2 65 VAL n 2 66 ASN n 2 67 THR n 2 68 LYS n 2 69 ASN n 2 70 SER n 2 71 SER n 2 72 GLY n 2 73 ASN n 2 74 ARG n 2 75 VAL n 2 76 PHE n 2 77 THR n 2 78 SER n 2 79 THR n 2 80 ASN n 2 81 ASN n 2 82 THR n 2 83 SER n 2 84 ASN n 2 85 ILE n 2 86 TRP n 2 87 TYR n 2 88 ILE n 2 89 GLU n 2 90 ASN n 2 91 ASP n 2 92 ALA n 2 93 TRP n 2 94 LYS n 2 95 GLY n 2 96 LYS n 2 97 ALA n 2 98 VAL n 2 99 SER n 2 100 ASP n 2 101 SER n 2 102 ASP n 2 103 VAL n 2 104 THR n 2 105 ALA n 2 106 LEU n 2 107 GLY n 2 108 THR n 2 109 GLY n 2 110 ASP n 2 111 VAL n 2 112 GLY n 2 113 LYS n 2 114 SER n 2 115 ASP n 2 116 PHE n 2 117 SER n 2 118 GLY n 2 119 THR n 2 120 GLU n 2 121 TRP n 2 122 LYS n 2 123 SER n 2 124 GLN n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 90 ? 'Geobacter sulfurreducens' 35554 ? ? 'ATCC 51573 / DSM 12127 / PCA' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 124 ? 'Geobacter sulfurreducens' 35554 ? ? 'ATCC 51573 / DSM 12127 / PCA' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q74D23_GEOSL Q74D23 ? 1 ;MANYPHTPTQAAKRRKETLMLQKLRNRKGFTLIELLIVVAIIGILAAIAIPQFSAYRVKAYNSAASSDLRNLKTALESAF ADDQTYPPES ; 1 2 UNP Q74D22_GEOSL Q74D22 ? 2 ;MKKIITIVAMLLAMQGIAIAAGKIPTTTMGGKDFTFKPSTNVSVSYFTTNGATSTAGTVNTDYAVNTKNSSGNRVFTSTN NTSNIWYIENDAWKGKAVSDSDVTALGTGDVGKSDFSGTEWKSQ ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7TGG A 1 ? 90 ? Q74D23 1 ? 90 ? -28 61 2 2 7TGG a 1 ? 124 ? Q74D22 1 ? 124 ? -19 104 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7TGG _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 7TGG _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 18585 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.656 ? 25335 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 7.829 ? 2565 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.045 ? 3015 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.006 ? 3225 ? f_plane_restr ? ? # _struct.entry_id 7TGG _struct.title 'Cryo-EM structure of PilA-N and PilA-C from Geobacter sulfurreducens' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7TGG _struct_keywords.text 'helical symmetry, filament, pili, type iv pili, pseudo pili, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 33 ? ALA A 46 ? ILE A 4 ALA A 17 1 ? 14 HELX_P HELX_P2 AA2 SER A 54 ? GLN A 84 ? SER A 25 GLN A 55 1 ? 31 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL B 42 ? THR B 48 ? VAL a 22 THR a 28 AA1 2 TYR B 63 ? ASN B 69 ? TYR a 43 ASN a 49 AA1 3 VAL B 75 ? THR B 79 ? VAL a 55 THR a 59 AA1 4 TRP B 86 ? TYR B 87 ? TRP a 66 TYR a 67 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER B 43 ? N SER a 23 O LYS B 68 ? O LYS a 48 AA1 2 3 N THR B 67 ? N THR a 47 O PHE B 76 ? O PHE a 56 AA1 3 4 N THR B 77 ? N THR a 57 O TRP B 86 ? O TRP a 66 # _atom_sites.entry_id 7TGG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -28 ? ? ? A . n A 1 2 ALA 2 -27 ? ? ? A . n A 1 3 ASN 3 -26 ? ? ? A . n A 1 4 TYR 4 -25 ? ? ? A . n A 1 5 PRO 5 -24 ? ? ? A . n A 1 6 HIS 6 -23 ? ? ? A . n A 1 7 THR 7 -22 ? ? ? A . n A 1 8 PRO 8 -21 ? ? ? A . n A 1 9 THR 9 -20 ? ? ? A . n A 1 10 GLN 10 -19 ? ? ? A . n A 1 11 ALA 11 -18 ? ? ? A . n A 1 12 ALA 12 -17 ? ? ? A . n A 1 13 LYS 13 -16 ? ? ? A . n A 1 14 ARG 14 -15 ? ? ? A . n A 1 15 ARG 15 -14 ? ? ? A . n A 1 16 LYS 16 -13 ? ? ? A . n A 1 17 GLU 17 -12 ? ? ? A . n A 1 18 THR 18 -11 ? ? ? A . n A 1 19 LEU 19 -10 ? ? ? A . n A 1 20 MET 20 -9 ? ? ? A . n A 1 21 LEU 21 -8 ? ? ? A . n A 1 22 GLN 22 -7 ? ? ? A . n A 1 23 LYS 23 -6 ? ? ? A . n A 1 24 LEU 24 -5 ? ? ? A . n A 1 25 ARG 25 -4 ? ? ? A . n A 1 26 ASN 26 -3 ? ? ? A . n A 1 27 ARG 27 -2 ? ? ? A . n A 1 28 LYS 28 -1 ? ? ? A . n A 1 29 GLY 29 0 ? ? ? A . n A 1 30 PHE 30 1 ? ? ? A . n A 1 31 THR 31 2 2 THR THR A . n A 1 32 LEU 32 3 3 LEU LEU A . n A 1 33 ILE 33 4 4 ILE ILE A . n A 1 34 GLU 34 5 5 GLU GLU A . n A 1 35 LEU 35 6 6 LEU LEU A . n A 1 36 LEU 36 7 7 LEU LEU A . n A 1 37 ILE 37 8 8 ILE ILE A . n A 1 38 VAL 38 9 9 VAL VAL A . n A 1 39 VAL 39 10 10 VAL VAL A . n A 1 40 ALA 40 11 11 ALA ALA A . n A 1 41 ILE 41 12 12 ILE ILE A . n A 1 42 ILE 42 13 13 ILE ILE A . n A 1 43 GLY 43 14 14 GLY GLY A . n A 1 44 ILE 44 15 15 ILE ILE A . n A 1 45 LEU 45 16 16 LEU LEU A . n A 1 46 ALA 46 17 17 ALA ALA A . n A 1 47 ALA 47 18 18 ALA ALA A . n A 1 48 ILE 48 19 19 ILE ILE A . n A 1 49 ALA 49 20 20 ALA ALA A . n A 1 50 ILE 50 21 21 ILE ILE A . n A 1 51 PRO 51 22 22 PRO PRO A . n A 1 52 GLN 52 23 23 GLN GLN A . n A 1 53 PHE 53 24 24 PHE PHE A . n A 1 54 SER 54 25 25 SER SER A . n A 1 55 ALA 55 26 26 ALA ALA A . n A 1 56 TYR 56 27 27 TYR TYR A . n A 1 57 ARG 57 28 28 ARG ARG A . n A 1 58 VAL 58 29 29 VAL VAL A . n A 1 59 LYS 59 30 30 LYS LYS A . n A 1 60 ALA 60 31 31 ALA ALA A . n A 1 61 TYR 61 32 32 TYR TYR A . n A 1 62 ASN 62 33 33 ASN ASN A . n A 1 63 SER 63 34 34 SER SER A . n A 1 64 ALA 64 35 35 ALA ALA A . n A 1 65 ALA 65 36 36 ALA ALA A . n A 1 66 SER 66 37 37 SER SER A . n A 1 67 SER 67 38 38 SER SER A . n A 1 68 ASP 68 39 39 ASP ASP A . n A 1 69 LEU 69 40 40 LEU LEU A . n A 1 70 ARG 70 41 41 ARG ARG A . n A 1 71 ASN 71 42 42 ASN ASN A . n A 1 72 LEU 72 43 43 LEU LEU A . n A 1 73 LYS 73 44 44 LYS LYS A . n A 1 74 THR 74 45 45 THR THR A . n A 1 75 ALA 75 46 46 ALA ALA A . n A 1 76 LEU 76 47 47 LEU LEU A . n A 1 77 GLU 77 48 48 GLU GLU A . n A 1 78 SER 78 49 49 SER SER A . n A 1 79 ALA 79 50 50 ALA ALA A . n A 1 80 PHE 80 51 51 PHE PHE A . n A 1 81 ALA 81 52 52 ALA ALA A . n A 1 82 ASP 82 53 53 ASP ASP A . n A 1 83 ASP 83 54 54 ASP ASP A . n A 1 84 GLN 84 55 55 GLN GLN A . n A 1 85 THR 85 56 56 THR THR A . n A 1 86 TYR 86 57 57 TYR TYR A . n A 1 87 PRO 87 58 58 PRO PRO A . n A 1 88 PRO 88 59 59 PRO PRO A . n A 1 89 GLU 89 60 60 GLU GLU A . n A 1 90 SER 90 61 61 SER SER A . n B 2 1 MET 1 -19 ? ? ? a . n B 2 2 LYS 2 -18 ? ? ? a . n B 2 3 LYS 3 -17 ? ? ? a . n B 2 4 ILE 4 -16 ? ? ? a . n B 2 5 ILE 5 -15 ? ? ? a . n B 2 6 THR 6 -14 ? ? ? a . n B 2 7 ILE 7 -13 ? ? ? a . n B 2 8 VAL 8 -12 ? ? ? a . n B 2 9 ALA 9 -11 ? ? ? a . n B 2 10 MET 10 -10 ? ? ? a . n B 2 11 LEU 11 -9 ? ? ? a . n B 2 12 LEU 12 -8 ? ? ? a . n B 2 13 ALA 13 -7 ? ? ? a . n B 2 14 MET 14 -6 ? ? ? a . n B 2 15 GLN 15 -5 ? ? ? a . n B 2 16 GLY 16 -4 ? ? ? a . n B 2 17 ILE 17 -3 ? ? ? a . n B 2 18 ALA 18 -2 ? ? ? a . n B 2 19 ILE 19 -1 ? ? ? a . n B 2 20 ALA 20 0 ? ? ? a . n B 2 21 ALA 21 1 1 ALA ALA a . n B 2 22 GLY 22 2 2 GLY GLY a . n B 2 23 LYS 23 3 3 LYS LYS a . n B 2 24 ILE 24 4 4 ILE ILE a . n B 2 25 PRO 25 5 5 PRO PRO a . n B 2 26 THR 26 6 6 THR THR a . n B 2 27 THR 27 7 7 THR THR a . n B 2 28 THR 28 8 8 THR THR a . n B 2 29 MET 29 9 9 MET MET a . n B 2 30 GLY 30 10 10 GLY GLY a . n B 2 31 GLY 31 11 11 GLY GLY a . n B 2 32 LYS 32 12 12 LYS LYS a . n B 2 33 ASP 33 13 13 ASP ASP a . n B 2 34 PHE 34 14 14 PHE PHE a . n B 2 35 THR 35 15 15 THR THR a . n B 2 36 PHE 36 16 16 PHE PHE a . n B 2 37 LYS 37 17 17 LYS LYS a . n B 2 38 PRO 38 18 18 PRO PRO a . n B 2 39 SER 39 19 19 SER SER a . n B 2 40 THR 40 20 20 THR THR a . n B 2 41 ASN 41 21 21 ASN ASN a . n B 2 42 VAL 42 22 22 VAL VAL a . n B 2 43 SER 43 23 23 SER SER a . n B 2 44 VAL 44 24 24 VAL VAL a . n B 2 45 SER 45 25 25 SER SER a . n B 2 46 TYR 46 26 26 TYR TYR a . n B 2 47 PHE 47 27 27 PHE PHE a . n B 2 48 THR 48 28 28 THR THR a . n B 2 49 THR 49 29 29 THR THR a . n B 2 50 ASN 50 30 30 ASN ASN a . n B 2 51 GLY 51 31 31 GLY GLY a . n B 2 52 ALA 52 32 32 ALA ALA a . n B 2 53 THR 53 33 33 THR THR a . n B 2 54 SER 54 34 34 SER SER a . n B 2 55 THR 55 35 35 THR THR a . n B 2 56 ALA 56 36 36 ALA ALA a . n B 2 57 GLY 57 37 37 GLY GLY a . n B 2 58 THR 58 38 38 THR THR a . n B 2 59 VAL 59 39 39 VAL VAL a . n B 2 60 ASN 60 40 40 ASN ASN a . n B 2 61 THR 61 41 41 THR THR a . n B 2 62 ASP 62 42 42 ASP ASP a . n B 2 63 TYR 63 43 43 TYR TYR a . n B 2 64 ALA 64 44 44 ALA ALA a . n B 2 65 VAL 65 45 45 VAL VAL a . n B 2 66 ASN 66 46 46 ASN ASN a . n B 2 67 THR 67 47 47 THR THR a . n B 2 68 LYS 68 48 48 LYS LYS a . n B 2 69 ASN 69 49 49 ASN ASN a . n B 2 70 SER 70 50 50 SER SER a . n B 2 71 SER 71 51 51 SER SER a . n B 2 72 GLY 72 52 52 GLY GLY a . n B 2 73 ASN 73 53 53 ASN ASN a . n B 2 74 ARG 74 54 54 ARG ARG a . n B 2 75 VAL 75 55 55 VAL VAL a . n B 2 76 PHE 76 56 56 PHE PHE a . n B 2 77 THR 77 57 57 THR THR a . n B 2 78 SER 78 58 58 SER SER a . n B 2 79 THR 79 59 59 THR THR a . n B 2 80 ASN 80 60 60 ASN ASN a . n B 2 81 ASN 81 61 61 ASN ASN a . n B 2 82 THR 82 62 62 THR THR a . n B 2 83 SER 83 63 63 SER SER a . n B 2 84 ASN 84 64 64 ASN ASN a . n B 2 85 ILE 85 65 65 ILE ILE a . n B 2 86 TRP 86 66 66 TRP TRP a . n B 2 87 TYR 87 67 67 TYR TYR a . n B 2 88 ILE 88 68 68 ILE ILE a . n B 2 89 GLU 89 69 69 GLU GLU a . n B 2 90 ASN 90 70 70 ASN ASN a . n B 2 91 ASP 91 71 71 ASP ASP a . n B 2 92 ALA 92 72 72 ALA ALA a . n B 2 93 TRP 93 73 73 TRP TRP a . n B 2 94 LYS 94 74 74 LYS LYS a . n B 2 95 GLY 95 75 75 GLY GLY a . n B 2 96 LYS 96 76 76 LYS LYS a . n B 2 97 ALA 97 77 77 ALA ALA a . n B 2 98 VAL 98 78 78 VAL VAL a . n B 2 99 SER 99 79 79 SER SER a . n B 2 100 ASP 100 80 80 ASP ASP a . n B 2 101 SER 101 81 81 SER SER a . n B 2 102 ASP 102 82 82 ASP ASP a . n B 2 103 VAL 103 83 83 VAL VAL a . n B 2 104 THR 104 84 84 THR THR a . n B 2 105 ALA 105 85 85 ALA ALA a . n B 2 106 LEU 106 86 86 LEU LEU a . n B 2 107 GLY 107 87 87 GLY GLY a . n B 2 108 THR 108 88 88 THR THR a . n B 2 109 GLY 109 89 89 GLY GLY a . n B 2 110 ASP 110 90 90 ASP ASP a . n B 2 111 VAL 111 91 91 VAL VAL a . n B 2 112 GLY 112 92 92 GLY GLY a . n B 2 113 LYS 113 93 93 LYS LYS a . n B 2 114 SER 114 94 94 SER SER a . n B 2 115 ASP 115 95 95 ASP ASP a . n B 2 116 PHE 116 96 96 PHE PHE a . n B 2 117 SER 117 97 97 SER SER a . n B 2 118 GLY 118 98 98 GLY GLY a . n B 2 119 THR 119 99 99 THR THR a . n B 2 120 GLU 120 100 100 GLU GLU a . n B 2 121 TRP 121 101 101 TRP TRP a . n B 2 122 LYS 122 102 102 LYS LYS a . n B 2 123 SER 123 103 103 SER SER a . n B 2 124 GLN 124 104 ? ? ? a . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email egelman@virginia.edu _pdbx_contact_author.name_first Edward _pdbx_contact_author.name_last Egelman _pdbx_contact_author.name_mi H _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4844-5212 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details 'UCSF CHIMERA 1.14_b42059.' _pdbx_struct_assembly.oligomeric_details 30-meric _pdbx_struct_assembly.oligomeric_count 30 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'helical symmetry operation' ? ? -0.995562 0.094108 0.000000 -0.00000 -0.094108 -0.995562 -0.000000 0.00000 0.000000 -0.000000 1.000000 -62.20800 3 'helical symmetry operation' ? ? 0.078459 0.996917 0.000000 -0.00000 -0.996917 0.078459 -0.000000 0.00000 0.000000 -0.000000 1.000000 -51.84000 4 'helical symmetry operation' ? ? 0.998027 -0.062791 0.000000 -0.00000 0.062791 0.998027 -0.000000 0.00000 0.000000 -0.000000 1.000000 -41.47200 5 'helical symmetry operation' ? ? -0.047106 -0.998890 0.000000 -0.00000 0.998890 -0.047106 -0.000000 0.00000 0.000000 -0.000000 1.000000 -31.10400 6 'helical symmetry operation' ? ? -0.999507 0.031411 0.000000 -0.00000 -0.031411 -0.999507 -0.000000 0.00000 0.000000 -0.000000 1.000000 -20.73600 7 'helical symmetry operation' ? ? 0.015707 0.999877 0.000000 -0.00000 -0.999877 0.015707 -0.000000 0.00000 0.000000 -0.000000 1.000000 -10.36800 8 'helical symmetry operation' ? ? 0.015707 -0.999877 0.000000 0.00000 0.999877 0.015707 -0.000000 -0.00000 0.000000 -0.000000 1.000000 10.36800 9 'helical symmetry operation' ? ? -0.999507 -0.031411 0.000000 0.00000 0.031411 -0.999507 -0.000000 -0.00000 0.000000 -0.000000 1.000000 20.73600 10 'helical symmetry operation' ? ? -0.047106 0.998890 0.000000 0.00000 -0.998890 -0.047106 -0.000000 -0.00000 0.000000 -0.000000 1.000000 31.10400 11 'helical symmetry operation' ? ? 0.998027 0.062791 0.000000 0.00000 -0.062791 0.998027 -0.000000 -0.00000 0.000000 -0.000000 1.000000 41.47200 12 'helical symmetry operation' ? ? 0.078459 -0.996917 0.000000 0.00000 0.996917 0.078459 -0.000000 -0.00000 0.000000 -0.000000 1.000000 51.84000 13 'helical symmetry operation' ? ? -0.995562 -0.094108 0.000000 0.00000 0.094108 -0.995562 -0.000000 -0.00000 0.000000 -0.000000 1.000000 62.20800 14 'helical symmetry operation' ? ? -0.109734 0.993961 0.000000 0.00000 -0.993961 -0.109734 -0.000000 -0.00000 0.000000 -0.000000 1.000000 72.57600 15 'helical symmetry operation' ? ? 0.992115 0.125333 0.000000 0.00000 -0.125333 0.992115 -0.000000 -0.00000 0.000000 -0.000000 1.000000 82.94400 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-02-23 2 'Structure model' 1 1 2023-05-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.19.2_4158: _software.pdbx_ordinal 1 # _em_3d_fitting.entry_id 7TGG _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7TGG _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 112011 _em_3d_reconstruction.resolution 4.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 6 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Filament of PilA-N and PilA-C proteins' _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list '1, 2' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7TGG _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 3000 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7TGG _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7TGG _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 42 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 THR _pdbx_validate_close_contact.auth_seq_id_2 45 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 24 ? ? -105.29 62.67 2 1 GLN A 55 ? ? 58.90 14.11 3 1 ALA a 36 ? ? 59.21 16.52 4 1 ASN a 61 ? ? -91.65 51.24 5 1 ASN a 64 ? ? 66.82 163.15 6 1 ASP a 90 ? ? 38.74 49.50 7 1 SER a 97 ? ? -94.07 -63.96 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -28 ? A MET 1 2 1 Y 1 A ALA -27 ? A ALA 2 3 1 Y 1 A ASN -26 ? A ASN 3 4 1 Y 1 A TYR -25 ? A TYR 4 5 1 Y 1 A PRO -24 ? A PRO 5 6 1 Y 1 A HIS -23 ? A HIS 6 7 1 Y 1 A THR -22 ? A THR 7 8 1 Y 1 A PRO -21 ? A PRO 8 9 1 Y 1 A THR -20 ? A THR 9 10 1 Y 1 A GLN -19 ? A GLN 10 11 1 Y 1 A ALA -18 ? A ALA 11 12 1 Y 1 A ALA -17 ? A ALA 12 13 1 Y 1 A LYS -16 ? A LYS 13 14 1 Y 1 A ARG -15 ? A ARG 14 15 1 Y 1 A ARG -14 ? A ARG 15 16 1 Y 1 A LYS -13 ? A LYS 16 17 1 Y 1 A GLU -12 ? A GLU 17 18 1 Y 1 A THR -11 ? A THR 18 19 1 Y 1 A LEU -10 ? A LEU 19 20 1 Y 1 A MET -9 ? A MET 20 21 1 Y 1 A LEU -8 ? A LEU 21 22 1 Y 1 A GLN -7 ? A GLN 22 23 1 Y 1 A LYS -6 ? A LYS 23 24 1 Y 1 A LEU -5 ? A LEU 24 25 1 Y 1 A ARG -4 ? A ARG 25 26 1 Y 1 A ASN -3 ? A ASN 26 27 1 Y 1 A ARG -2 ? A ARG 27 28 1 Y 1 A LYS -1 ? A LYS 28 29 1 Y 1 A GLY 0 ? A GLY 29 30 1 Y 1 A PHE 1 ? A PHE 30 31 1 Y 1 a MET -19 ? B MET 1 32 1 Y 1 a LYS -18 ? B LYS 2 33 1 Y 1 a LYS -17 ? B LYS 3 34 1 Y 1 a ILE -16 ? B ILE 4 35 1 Y 1 a ILE -15 ? B ILE 5 36 1 Y 1 a THR -14 ? B THR 6 37 1 Y 1 a ILE -13 ? B ILE 7 38 1 Y 1 a VAL -12 ? B VAL 8 39 1 Y 1 a ALA -11 ? B ALA 9 40 1 Y 1 a MET -10 ? B MET 10 41 1 Y 1 a LEU -9 ? B LEU 11 42 1 Y 1 a LEU -8 ? B LEU 12 43 1 Y 1 a ALA -7 ? B ALA 13 44 1 Y 1 a MET -6 ? B MET 14 45 1 Y 1 a GLN -5 ? B GLN 15 46 1 Y 1 a GLY -4 ? B GLY 16 47 1 Y 1 a ILE -3 ? B ILE 17 48 1 Y 1 a ALA -2 ? B ALA 18 49 1 Y 1 a ILE -1 ? B ILE 19 50 1 Y 1 a ALA 0 ? B ALA 20 51 1 Y 1 a GLN 104 ? B GLN 124 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 35554 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Geobacter sulfurreducens' _em_entity_assembly_naturalsource.strain 'ATCC 51573 / DSM 12127 / PCA' _em_entity_assembly_naturalsource.tissue ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit 89.1 _em_helical_entity.axial_rise_per_subunit 10.4 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM122510 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' K99GM138756 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #