HEADER ISOMERASE 10-JAN-22 7THC TITLE STRUCTURE OF CYCLOPHILIN D PEPTIDYL-PROLYL ISOMERASE DOMAIN BOUND TO TITLE 2 MACROCYCLIC INHIBITOR B25 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE F, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPIASE F,CYCLOPHILIN D,CYP-D,CYPD,CYCLOPHILIN F, COMPND 5 MITOCHONDRIAL CYCLOPHILIN,CYP-M,ROTAMASE F; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPIF, CYP3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS OXIDATIVE STRESS, NECROSIS, MITOCHONDRIAL PERMEABILITY, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.RANGWALA,M.K.THAKUR,M.A.SEELIGER,A.A.PETERSON,D.R.LIU REVDAT 4 18-OCT-23 7THC 1 REMARK REVDAT 3 02-NOV-22 7THC 1 JRNL REVDAT 2 12-OCT-22 7THC 1 JRNL REVDAT 1 24-AUG-22 7THC 0 JRNL AUTH A.A.PETERSON,A.M.RANGWALA,M.K.THAKUR,P.S.WARD,C.HUNG, JRNL AUTH 2 I.R.OUTHWAITE,A.I.CHAN,D.L.USANOV,V.K.MOOTHA,M.A.SEELIGER, JRNL AUTH 3 D.R.LIU JRNL TITL DISCOVERY AND MOLECULAR BASIS OF SUBTYPE-SELECTIVE JRNL TITL 2 CYCLOPHILIN INHIBITORS. JRNL REF NAT.CHEM.BIOL. V. 18 1184 2022 JRNL REFN ESSN 1552-4469 JRNL PMID 36163383 JRNL DOI 10.1038/S41589-022-01116-1 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.470 REMARK 3 COMPLETENESS FOR RANGE (%) : 71.1 REMARK 3 NUMBER OF REFLECTIONS : 18375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.8300 - 3.6900 1.00 1932 215 0.1493 0.1825 REMARK 3 2 3.6900 - 2.9300 1.00 1828 200 0.1365 0.1621 REMARK 3 3 2.9300 - 2.5600 1.00 1805 200 0.1382 0.1599 REMARK 3 4 2.5600 - 2.3300 1.00 1805 191 0.1320 0.1825 REMARK 3 5 2.3300 - 2.1600 1.00 1767 203 0.1188 0.1369 REMARK 3 6 2.1600 - 2.0300 0.99 1760 191 0.1197 0.1554 REMARK 3 7 2.0300 - 1.9300 0.86 1515 162 0.1253 0.1457 REMARK 3 8 1.9300 - 1.8500 0.66 1175 137 0.1271 0.1539 REMARK 3 9 1.8500 - 1.7800 0.55 983 109 0.1235 0.1539 REMARK 3 10 1.7800 - 1.7200 0.44 784 88 0.1259 0.1604 REMARK 3 11 1.7200 - 1.6600 0.36 631 68 0.1346 0.1633 REMARK 3 12 1.6600 - 1.6100 0.23 409 44 0.1399 0.1510 REMARK 3 13 1.6100 - 1.5700 0.09 155 18 0.1764 0.3010 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.111 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.095 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1345 REMARK 3 ANGLE : 1.062 1814 REMARK 3 CHIRALITY : 0.054 190 REMARK 3 PLANARITY : 0.006 235 REMARK 3 DIHEDRAL : 19.365 252 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4201 3.4533 17.3116 REMARK 3 T TENSOR REMARK 3 T11: 0.0890 T22: 0.0733 REMARK 3 T33: 0.0990 T12: 0.0046 REMARK 3 T13: -0.0017 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.0494 L22: 0.6284 REMARK 3 L33: 0.6517 L12: 0.1098 REMARK 3 L13: -0.1065 L23: 0.1656 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: 0.0559 S13: -0.1845 REMARK 3 S21: 0.0462 S22: 0.0303 S23: 0.0577 REMARK 3 S31: 0.0358 S32: 0.0179 S33: 0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9397 12.7534 20.9967 REMARK 3 T TENSOR REMARK 3 T11: 0.0545 T22: 0.0714 REMARK 3 T33: 0.0602 T12: 0.0021 REMARK 3 T13: 0.0014 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.3154 L22: 0.7342 REMARK 3 L33: 0.5332 L12: 0.1602 REMARK 3 L13: 0.1519 L23: 0.2053 REMARK 3 S TENSOR REMARK 3 S11: 0.0319 S12: -0.0169 S13: 0.0079 REMARK 3 S21: 0.0460 S22: -0.0137 S23: -0.0293 REMARK 3 S31: 0.0326 S32: 0.0542 S33: 0.0021 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4714 18.9180 18.4013 REMARK 3 T TENSOR REMARK 3 T11: 0.0541 T22: 0.0623 REMARK 3 T33: 0.0587 T12: -0.0032 REMARK 3 T13: -0.0014 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.7971 L22: 1.0408 REMARK 3 L33: 0.6687 L12: 0.0961 REMARK 3 L13: 0.4864 L23: 0.2459 REMARK 3 S TENSOR REMARK 3 S11: -0.0122 S12: 0.0340 S13: 0.0678 REMARK 3 S21: -0.0398 S22: 0.0367 S23: -0.0332 REMARK 3 S31: -0.0771 S32: 0.0614 S33: 0.0021 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4434 12.4171 13.5050 REMARK 3 T TENSOR REMARK 3 T11: 0.0528 T22: 0.0662 REMARK 3 T33: 0.0636 T12: -0.0110 REMARK 3 T13: 0.0094 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.6160 L22: 2.2444 REMARK 3 L33: 0.2131 L12: 0.6387 REMARK 3 L13: 0.0562 L23: 0.1395 REMARK 3 S TENSOR REMARK 3 S11: -0.0453 S12: 0.1159 S13: -0.0231 REMARK 3 S21: -0.1325 S22: 0.1430 S23: -0.0156 REMARK 3 S31: -0.0300 S32: 0.1040 S33: 0.0174 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6638 8.0071 7.1078 REMARK 3 T TENSOR REMARK 3 T11: 0.1033 T22: 0.0758 REMARK 3 T33: 0.1034 T12: -0.0073 REMARK 3 T13: -0.0055 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.1491 L22: 0.7898 REMARK 3 L33: 0.0298 L12: 0.0680 REMARK 3 L13: 0.0092 L23: 0.0341 REMARK 3 S TENSOR REMARK 3 S11: 0.1475 S12: 0.0715 S13: 0.1205 REMARK 3 S21: -0.2131 S22: -0.1228 S23: -0.0372 REMARK 3 S31: 0.0882 S32: -0.0492 S33: 0.0123 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9777 18.5180 9.1732 REMARK 3 T TENSOR REMARK 3 T11: 0.0715 T22: 0.0993 REMARK 3 T33: 0.1319 T12: 0.0371 REMARK 3 T13: 0.0027 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.8664 L22: 1.0370 REMARK 3 L33: 1.9140 L12: 0.7421 REMARK 3 L13: -0.6108 L23: 0.2493 REMARK 3 S TENSOR REMARK 3 S11: 0.0982 S12: -0.0169 S13: 0.2334 REMARK 3 S21: -0.0899 S22: -0.0433 S23: 0.2347 REMARK 3 S31: -0.3139 S32: -0.1779 S33: -0.0889 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0295 4.0016 22.1846 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.1146 REMARK 3 T33: 0.0919 T12: 0.0006 REMARK 3 T13: -0.0088 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.7125 L22: 0.1689 REMARK 3 L33: 0.4520 L12: 0.2750 REMARK 3 L13: 0.4021 L23: 0.0365 REMARK 3 S TENSOR REMARK 3 S11: 0.1949 S12: 0.0615 S13: -0.3580 REMARK 3 S21: 0.0974 S22: -0.0916 S23: 0.1746 REMARK 3 S31: 0.1320 S32: 0.0767 S33: 0.0082 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7THC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262293. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92011 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR; REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC, AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18407 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 25.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 71.1 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 8.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : 0.03500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BIT REMARK 200 REMARK 200 REMARK: BLADED, TABULAR, ROUGHLY 0.3-0.5 MM IN LENGTH REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 3350 0.5 M KH2PO4 7.5% REMARK 280 GLYCEROL PROTEIN AND INHIBITOR WERE MIXED IN RATIO 1:2 1 UL OF REMARK 280 PROTEIN:INHIBITOR COMPLEX WAS MIXED WITH 1 UL MOTHER LIQUOR, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.59500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.79000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.59500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.79000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 53 HG22 THR A 201 1.53 REMARK 500 OD2 ASP A 53 CG2 THR A 201 1.92 REMARK 500 O HOH A 463 O HOH A 580 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 102 -85.34 -147.76 REMARK 500 ASN A 113 10.82 -146.37 REMARK 500 THR A 161 63.00 -106.27 REMARK 500 PHE A 171 12.65 -143.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 642 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A 643 DISTANCE = 6.07 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7TGS RELATED DB: PDB REMARK 900 7TGS CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT REMARK 900 MACROCYCLIC INHIBITOR. REMARK 900 RELATED ID: 7TGT RELATED DB: PDB REMARK 900 7TGT CONTAINS THE SAME PROTEIN COMPLEXED TO A DIFFERENT MACROCYCLIC REMARK 900 INHIBITOR. REMARK 900 RELATED ID: 7TGU RELATED DB: PDB REMARK 900 7TGU CONTAINS THE SAME PROTEIN COMPLEXED TO A DIFFERENT MACROCYCLIC REMARK 900 INHIBITOR. REMARK 900 RELATED ID: 7TGV RELATED DB: PDB REMARK 900 7TGV CONTAINS THE SAME PROTEIN COMPLEXED TO A DIFFERENT MACROCYCLIC REMARK 900 INHIBITOR. REMARK 900 RELATED ID: 7TH1 RELATED DB: PDB REMARK 900 7TH1 CONTAINS THE SAME PROTEIN COMPLEXED TO A DIFFERENT MACROCYCLIC REMARK 900 INHIBITOR. REMARK 900 RELATED ID: 7TH6 RELATED DB: PDB REMARK 900 7TH6 CONTAINS THE SAME PROTEIN COMPLEXED TO A DIFFERENT MACROCYCLIC REMARK 900 INHIBITOR. REMARK 900 RELATED ID: 7TH7 RELATED DB: PDB REMARK 900 7TH7 CONTAINS THE SAME PROTEIN COMPLEXED TO A DIFFERENT MACROCYCLIC REMARK 900 INHIBITOR. DBREF 7THC A 45 207 UNP P30405 PPIF_HUMAN 45 207 SEQADV 7THC ILE A 175 UNP P30405 LYS 175 ENGINEERED MUTATION SEQRES 1 A 163 ASN PRO LEU VAL TYR LEU ASP VAL ASP ALA ASN GLY LYS SEQRES 2 A 163 PRO LEU GLY ARG VAL VAL LEU GLU LEU LYS ALA ASP VAL SEQRES 3 A 163 VAL PRO LYS THR ALA GLU ASN PHE ARG ALA LEU CYS THR SEQRES 4 A 163 GLY GLU LYS GLY PHE GLY TYR LYS GLY SER THR PHE HIS SEQRES 5 A 163 ARG VAL ILE PRO SER PHE MET CYS GLN ALA GLY ASP PHE SEQRES 6 A 163 THR ASN HIS ASN GLY THR GLY GLY LYS SER ILE TYR GLY SEQRES 7 A 163 SER ARG PHE PRO ASP GLU ASN PHE THR LEU LYS HIS VAL SEQRES 8 A 163 GLY PRO GLY VAL LEU SER MET ALA ASN ALA GLY PRO ASN SEQRES 9 A 163 THR ASN GLY SER GLN PHE PHE ILE CYS THR ILE LYS THR SEQRES 10 A 163 ASP TRP LEU ASP GLY LYS HIS VAL VAL PHE GLY HIS VAL SEQRES 11 A 163 ILE GLU GLY MET ASP VAL VAL LYS LYS ILE GLU SER PHE SEQRES 12 A 163 GLY SER LYS SER GLY ARG THR SER LYS LYS ILE VAL ILE SEQRES 13 A 163 THR ASP CYS GLY GLN LEU SER HET I4Z A 301 125 HETNAM I4Z 3-(4'-{[(4S,7S,11R,13E,19S)-19-{[2-(2-AMINOETHOXY) HETNAM 2 I4Z ETHYL]CARBAMOYL}-7-BENZYL-3,6,12,15,21-PENTAOXO-1,3,4, HETNAM 3 I4Z 5,6,7,8,9,10,12,15,16,17,18,19,20,21,22-OCTADECAHYDRO- HETNAM 4 I4Z 2H-7,11-METHANO-2,5,11,16,20- HETNAM 5 I4Z BENZOPENTAAZACYCLOTETRACOSIN-4-YL]METHYL}[1,1'- HETNAM 6 I4Z BIPHENYL]-4-YL)PROP-2-YNOIC ACID FORMUL 2 I4Z C52 H57 N7 O9 FORMUL 3 HOH *243(H2 O) HELIX 1 AA1 VAL A 71 GLY A 84 1 14 HELIX 2 AA2 THR A 161 ASP A 165 5 5 HELIX 3 AA3 GLY A 177 PHE A 187 1 11 SHEET 1 AA1 8 PHE A 95 ILE A 99 0 SHEET 2 AA1 8 MET A 103 ALA A 106 -1 O GLN A 105 N ARG A 97 SHEET 3 AA1 8 PHE A 154 CYS A 157 -1 O PHE A 154 N ALA A 106 SHEET 4 AA1 8 VAL A 139 MET A 142 -1 N SER A 141 O PHE A 155 SHEET 5 AA1 8 VAL A 170 GLU A 176 -1 O PHE A 171 N LEU A 140 SHEET 6 AA1 8 LYS A 57 LEU A 66 -1 N GLU A 65 O HIS A 173 SHEET 7 AA1 8 LEU A 47 ALA A 54 -1 N VAL A 52 O LEU A 59 SHEET 8 AA1 8 ILE A 198 GLN A 205 -1 O ASP A 202 N ASP A 51 CRYST1 38.564 67.190 69.580 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025931 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014883 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014372 0.00000