HEADER BLOOD CLOTTING, HYDROLASE/INHIBITOR 12-JAN-22 7THS TITLE MACROCYCLIC PLASMIN INHIBITOR CAVEAT 7THS RESIDUES PRO A 551 AND GLN A 552 THAT ARE NEXT TO EACH OTHER CAVEAT 2 7THS IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 7THS BETWEEN C AND N IS 1.08. RESIDUES GLN A 552 AND VAL A 553 CAVEAT 4 7THS THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 5 7THS PROPERLY LINKED: DISTANCE BETWEEN C AND N IS 1.15. RESIDUES CAVEAT 6 7THS ARG B 561 AND VAL B 562 THAT ARE NEXT TO EACH OTHER IN THE CAVEAT 7 7THS SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE BETWEEN C CAVEAT 8 7THS AND N IS 19.27. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMINOGEN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.21.7; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLG; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS PROTEASE, INHIBITOR, BLOOD CLOTTING, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.GUOJIE REVDAT 3 25-OCT-23 7THS 1 REMARK REVDAT 2 02-AUG-23 7THS 1 SOURCE JRNL REVDAT 1 18-JAN-23 7THS 0 JRNL AUTH S.J.A.WIEDEMEYER,G.WU,T.L.P.PHAM,H.LANG-HENKEL, JRNL AUTH 2 B.PEREZ URZUA,J.C.WHISSTOCK,R.H.P.LAW,T.STEINMETZER JRNL TITL SYNTHESIS AND STRUCTURAL CHARACTERIZATION OF MACROCYCLIC JRNL TITL 2 PLASMIN INHIBITORS. JRNL REF CHEMMEDCHEM V. 18 00632 2023 JRNL REFN ESSN 1860-7187 JRNL PMID 36710259 JRNL DOI 10.1002/CMDC.202200632 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 42038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3100 - 4.4400 1.00 2771 125 0.1811 0.2033 REMARK 3 2 4.4400 - 3.5200 1.00 2713 127 0.1530 0.1702 REMARK 3 3 3.5200 - 3.0800 1.00 2706 145 0.1711 0.1899 REMARK 3 4 3.0800 - 2.8000 1.00 2679 112 0.1848 0.2178 REMARK 3 5 2.8000 - 2.6000 1.00 2658 147 0.1841 0.2223 REMARK 3 6 2.6000 - 2.4400 1.00 2622 163 0.1888 0.1985 REMARK 3 7 2.4400 - 2.3200 1.00 2677 127 0.1860 0.2011 REMARK 3 8 2.3200 - 2.2200 1.00 2670 136 0.1847 0.2051 REMARK 3 9 2.2200 - 2.1300 1.00 2626 154 0.1924 0.2237 REMARK 3 10 2.1300 - 2.0600 1.00 2660 141 0.1983 0.1955 REMARK 3 11 2.0600 - 2.0000 1.00 2650 141 0.1994 0.2140 REMARK 3 12 2.0000 - 1.9400 1.00 2602 160 0.2005 0.2278 REMARK 3 13 1.9400 - 1.8900 1.00 2642 151 0.2197 0.2585 REMARK 3 14 1.8900 - 1.8400 1.00 2647 137 0.2413 0.2853 REMARK 3 15 1.8400 - 1.8000 1.00 2618 131 0.2550 0.2883 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 547 THROUGH 600 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0146 -26.2319 33.9173 REMARK 3 T TENSOR REMARK 3 T11: 0.1147 T22: 0.2297 REMARK 3 T33: 0.2371 T12: -0.0390 REMARK 3 T13: 0.0141 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 1.9174 L22: 1.9470 REMARK 3 L33: 1.7290 L12: -0.3182 REMARK 3 L13: 0.3338 L23: 0.5397 REMARK 3 S TENSOR REMARK 3 S11: 0.0527 S12: -0.0654 S13: -0.0298 REMARK 3 S21: -0.0526 S22: -0.0313 S23: -0.5380 REMARK 3 S31: -0.1419 S32: 0.4724 S33: -0.0123 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 601 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6130 -27.8337 22.1529 REMARK 3 T TENSOR REMARK 3 T11: 0.3573 T22: 0.2392 REMARK 3 T33: 0.2840 T12: -0.0203 REMARK 3 T13: 0.1211 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.8918 L22: 1.2356 REMARK 3 L33: 2.1636 L12: 0.2815 REMARK 3 L13: -0.6011 L23: 0.1914 REMARK 3 S TENSOR REMARK 3 S11: -0.0856 S12: 0.2490 S13: 0.0887 REMARK 3 S21: -0.6416 S22: 0.0343 S23: -0.4718 REMARK 3 S31: -0.3004 S32: 0.3207 S33: 0.1164 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 641 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.1029 -27.9362 34.7587 REMARK 3 T TENSOR REMARK 3 T11: 0.1453 T22: 0.1200 REMARK 3 T33: 0.1683 T12: -0.0179 REMARK 3 T13: 0.0189 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 1.3142 L22: 1.6330 REMARK 3 L33: 1.2073 L12: 0.0981 REMARK 3 L13: -0.1420 L23: -0.0346 REMARK 3 S TENSOR REMARK 3 S11: 0.0378 S12: -0.0317 S13: -0.0137 REMARK 3 S21: -0.0849 S22: -0.0424 S23: -0.2876 REMARK 3 S31: -0.1718 S32: 0.2489 S33: 0.0239 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 698 THROUGH 743 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7778 -19.3313 39.9704 REMARK 3 T TENSOR REMARK 3 T11: 0.1440 T22: 0.0865 REMARK 3 T33: 0.0639 T12: 0.0010 REMARK 3 T13: -0.0176 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 4.8812 L22: 1.9979 REMARK 3 L33: 1.3071 L12: -0.8260 REMARK 3 L13: -0.9981 L23: 0.9518 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: -0.1451 S13: 0.1053 REMARK 3 S21: 0.0128 S22: -0.0166 S23: 0.0460 REMARK 3 S31: -0.1145 S32: 0.0177 S33: 0.0346 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 744 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3120 -29.8678 36.8695 REMARK 3 T TENSOR REMARK 3 T11: 0.0598 T22: 0.0833 REMARK 3 T33: 0.0709 T12: -0.0137 REMARK 3 T13: -0.0071 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.4983 L22: 1.6729 REMARK 3 L33: 1.9267 L12: -0.0599 REMARK 3 L13: -0.0502 L23: 0.7379 REMARK 3 S TENSOR REMARK 3 S11: 0.0630 S12: -0.1088 S13: -0.0699 REMARK 3 S21: 0.0416 S22: -0.0335 S23: -0.1007 REMARK 3 S31: -0.0101 S32: 0.0809 S33: -0.0251 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 542 THROUGH 610 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2374 -4.0207 13.0425 REMARK 3 T TENSOR REMARK 3 T11: 0.0410 T22: 0.0780 REMARK 3 T33: 0.0728 T12: 0.0185 REMARK 3 T13: -0.0160 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.8501 L22: 1.7443 REMARK 3 L33: 0.9359 L12: 0.0883 REMARK 3 L13: 0.0250 L23: 0.4756 REMARK 3 S TENSOR REMARK 3 S11: -0.0146 S12: -0.0497 S13: 0.0244 REMARK 3 S21: 0.0677 S22: 0.0166 S23: 0.0369 REMARK 3 S31: 0.0337 S32: 0.0195 S33: 0.0028 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 611 THROUGH 630 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1785 -5.1985 20.2208 REMARK 3 T TENSOR REMARK 3 T11: 0.1095 T22: 0.1414 REMARK 3 T33: 0.1154 T12: 0.0292 REMARK 3 T13: -0.0429 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.8888 L22: 4.7046 REMARK 3 L33: 2.5089 L12: -1.9011 REMARK 3 L13: 0.0405 L23: 1.3921 REMARK 3 S TENSOR REMARK 3 S11: -0.0713 S12: -0.1935 S13: 0.0365 REMARK 3 S21: 0.1490 S22: 0.1901 S23: -0.2075 REMARK 3 S31: 0.3545 S32: 0.3618 S33: -0.0234 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 631 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2064 -4.2165 9.7327 REMARK 3 T TENSOR REMARK 3 T11: 0.0644 T22: 0.0771 REMARK 3 T33: 0.0684 T12: 0.0144 REMARK 3 T13: 0.0044 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.2675 L22: 0.9566 REMARK 3 L33: 0.7733 L12: 0.3035 REMARK 3 L13: 0.3408 L23: 0.2670 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: -0.0051 S13: 0.0109 REMARK 3 S21: 0.0428 S22: -0.0331 S23: 0.0585 REMARK 3 S31: 0.0003 S32: -0.0400 S33: 0.0151 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7THS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000261722. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5-5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42073 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 92.627 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14600 REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.85300 REMARK 200 R SYM FOR SHELL (I) : 0.85300 REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5UGG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13-18% PEG 4000, 150 MM AMMONIUM REMARK 280 SULFATE, 100 MM MES, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.29900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 542 REMARK 465 ALA A 543 REMARK 465 PRO A 544 REMARK 465 SER A 545 REMARK 465 PHE A 546 REMARK 465 ARG A 561 REMARK 465 ASN B 625 REMARK 465 LEU B 626 REMARK 465 GLU B 627 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 560 CA C O REMARK 470 ARG A 582 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 687 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 551 C GLN A 552 N -0.260 REMARK 500 GLN A 552 C VAL A 553 N -0.185 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 621 -41.18 -130.52 REMARK 500 VAL A 624 -63.33 -98.77 REMARK 500 ARG A 677 -2.70 81.81 REMARK 500 THR A 691 -0.59 -140.77 REMARK 500 PHE A 692 150.81 88.00 REMARK 500 PHE A 715 -101.95 -117.76 REMARK 500 LYS A 750 -70.25 72.54 REMARK 500 ASP A 751 10.47 -150.99 REMARK 500 SER A 760 -71.83 -119.08 REMARK 500 PHE B 587 -16.45 -142.59 REMARK 500 ARG B 677 -0.67 75.89 REMARK 500 PHE B 715 -103.56 -113.12 REMARK 500 LYS B 750 -65.80 70.85 REMARK 500 SER B 760 -68.84 -123.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1048 DISTANCE = 5.99 ANGSTROMS DBREF 7THS A 542 791 UNP P00747 PLMN_HUMAN 561 810 DBREF 7THS B 542 791 UNP P00747 PLMN_HUMAN 561 810 SEQADV 7THS ALA A 741 UNP P00747 SER 760 ENGINEERED MUTATION SEQADV 7THS ALA B 741 UNP P00747 SER 760 ENGINEERED MUTATION SEQRES 1 A 250 ALA ALA PRO SER PHE ASP CYS GLY LYS PRO GLN VAL GLU SEQRES 2 A 250 PRO LYS LYS CYS PRO GLY ARG VAL VAL GLY GLY CYS VAL SEQRES 3 A 250 ALA HIS PRO HIS SER TRP PRO TRP GLN VAL SER LEU ARG SEQRES 4 A 250 THR ARG PHE GLY MET HIS PHE CYS GLY GLY THR LEU ILE SEQRES 5 A 250 SER PRO GLU TRP VAL LEU THR ALA ALA HIS CYS LEU GLU SEQRES 6 A 250 LYS SER PRO ARG PRO SER SER TYR LYS VAL ILE LEU GLY SEQRES 7 A 250 ALA HIS GLN GLU VAL ASN LEU GLU PRO HIS VAL GLN GLU SEQRES 8 A 250 ILE GLU VAL SER ARG LEU PHE LEU GLU PRO THR ARG LYS SEQRES 9 A 250 ASP ILE ALA LEU LEU LYS LEU SER SER PRO ALA VAL ILE SEQRES 10 A 250 THR ASP LYS VAL ILE PRO ALA CYS LEU PRO SER PRO ASN SEQRES 11 A 250 TYR VAL VAL ALA ASP ARG THR GLU CYS PHE ILE THR GLY SEQRES 12 A 250 TRP GLY GLU THR GLN GLY THR PHE GLY ALA GLY LEU LEU SEQRES 13 A 250 LYS GLU ALA GLN LEU PRO VAL ILE GLU ASN LYS VAL CYS SEQRES 14 A 250 ASN ARG TYR GLU PHE LEU ASN GLY ARG VAL GLN SER THR SEQRES 15 A 250 GLU LEU CYS ALA GLY HIS LEU ALA GLY GLY THR ASP SER SEQRES 16 A 250 CYS GLN GLY ASP ALA GLY GLY PRO LEU VAL CYS PHE GLU SEQRES 17 A 250 LYS ASP LYS TYR ILE LEU GLN GLY VAL THR SER TRP GLY SEQRES 18 A 250 LEU GLY CYS ALA ARG PRO ASN LYS PRO GLY VAL TYR VAL SEQRES 19 A 250 ARG VAL SER ARG PHE VAL THR TRP ILE GLU GLY VAL MET SEQRES 20 A 250 ARG ASN ASN SEQRES 1 B 250 ALA ALA PRO SER PHE ASP CYS GLY LYS PRO GLN VAL GLU SEQRES 2 B 250 PRO LYS LYS CYS PRO GLY ARG VAL VAL GLY GLY CYS VAL SEQRES 3 B 250 ALA HIS PRO HIS SER TRP PRO TRP GLN VAL SER LEU ARG SEQRES 4 B 250 THR ARG PHE GLY MET HIS PHE CYS GLY GLY THR LEU ILE SEQRES 5 B 250 SER PRO GLU TRP VAL LEU THR ALA ALA HIS CYS LEU GLU SEQRES 6 B 250 LYS SER PRO ARG PRO SER SER TYR LYS VAL ILE LEU GLY SEQRES 7 B 250 ALA HIS GLN GLU VAL ASN LEU GLU PRO HIS VAL GLN GLU SEQRES 8 B 250 ILE GLU VAL SER ARG LEU PHE LEU GLU PRO THR ARG LYS SEQRES 9 B 250 ASP ILE ALA LEU LEU LYS LEU SER SER PRO ALA VAL ILE SEQRES 10 B 250 THR ASP LYS VAL ILE PRO ALA CYS LEU PRO SER PRO ASN SEQRES 11 B 250 TYR VAL VAL ALA ASP ARG THR GLU CYS PHE ILE THR GLY SEQRES 12 B 250 TRP GLY GLU THR GLN GLY THR PHE GLY ALA GLY LEU LEU SEQRES 13 B 250 LYS GLU ALA GLN LEU PRO VAL ILE GLU ASN LYS VAL CYS SEQRES 14 B 250 ASN ARG TYR GLU PHE LEU ASN GLY ARG VAL GLN SER THR SEQRES 15 B 250 GLU LEU CYS ALA GLY HIS LEU ALA GLY GLY THR ASP SER SEQRES 16 B 250 CYS GLN GLY ASP ALA GLY GLY PRO LEU VAL CYS PHE GLU SEQRES 17 B 250 LYS ASP LYS TYR ILE LEU GLN GLY VAL THR SER TRP GLY SEQRES 18 B 250 LEU GLY CYS ALA ARG PRO ASN LYS PRO GLY VAL TYR VAL SEQRES 19 B 250 ARG VAL SER ARG PHE VAL THR TRP ILE GLU GLY VAL MET SEQRES 20 B 250 ARG ASN ASN HET I5Y A 801 109 HET SO4 A 802 5 HET SO4 A 803 5 HET SO4 A 804 5 HET SO4 A 805 5 HET I5Y B 801 109 HET SO4 B 802 5 HET SO4 B 803 5 HET SO4 B 804 5 HET I5Q B 805 16 HETNAM I5Y (6S,9R,20R,23S)-N-{[4-(AMINOMETHYL)PHENYL]METHYL}-20- HETNAM 2 I5Y [(BENZENESULFONYL)AMINO]-3,13,21-TRIOXO-2,6,9,14,22- HETNAM 3 I5Y PENTAAZATETRACYCLO[23.2.2.2~6,9~.2~15, HETNAM 4 I5Y 18~]TRITRIACONTA-1(27),15,17,25,28,30-HEXAENE-23- HETNAM 5 I5Y CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM I5Q (2S)-BUTANE-1,2-DIOL FORMUL 3 I5Y 2(C43 H52 N8 O6 S) FORMUL 4 SO4 7(O4 S 2-) FORMUL 12 I5Q C4 H10 O2 FORMUL 13 HOH *355(H2 O) HELIX 1 AA1 ALA A 601 GLU A 606 5 6 HELIX 2 AA2 ARG A 610 SER A 612 5 3 HELIX 3 AA3 GLU A 706 ASN A 711 1 6 HELIX 4 AA4 PHE A 780 ASN A 791 1 12 HELIX 5 AA5 ALA B 601 GLU B 606 5 6 HELIX 6 AA6 ARG B 610 SER B 612 5 3 HELIX 7 AA7 GLU B 706 ASN B 711 1 6 HELIX 8 AA8 PHE B 780 ASN B 790 1 11 SHEET 1 AA1 8 CYS A 566 VAL A 567 0 SHEET 2 AA1 8 LYS A 698 ILE A 705 -1 O GLU A 699 N CYS A 566 SHEET 3 AA1 8 GLU A 724 ALA A 727 -1 O CYS A 726 N ILE A 705 SHEET 4 AA1 8 GLY A 772 ARG A 776 -1 O TYR A 774 N LEU A 725 SHEET 5 AA1 8 LYS A 752 TRP A 761 -1 N TRP A 761 O VAL A 773 SHEET 6 AA1 8 PRO A 744 GLU A 749 -1 N GLU A 749 O LYS A 752 SHEET 7 AA1 8 GLU A 679 GLY A 684 -1 N PHE A 681 O VAL A 746 SHEET 8 AA1 8 LYS A 698 ILE A 705 -1 O LEU A 702 N CYS A 680 SHEET 1 AA2 7 GLN A 576 THR A 581 0 SHEET 2 AA2 7 HIS A 586 SER A 594 -1 O CYS A 588 N LEU A 579 SHEET 3 AA2 7 TRP A 597 THR A 600 -1 O LEU A 599 N THR A 591 SHEET 4 AA2 7 ALA A 648 LEU A 652 -1 O LEU A 650 N VAL A 598 SHEET 5 AA2 7 GLN A 631 LEU A 640 -1 N SER A 636 O LYS A 651 SHEET 6 AA2 7 TYR A 614 LEU A 618 -1 N LEU A 618 O GLN A 631 SHEET 7 AA2 7 GLN A 576 THR A 581 -1 N ARG A 580 O LYS A 615 SHEET 1 AA3 8 CYS B 566 VAL B 567 0 SHEET 2 AA3 8 LYS B 698 ILE B 705 -1 O GLU B 699 N CYS B 566 SHEET 3 AA3 8 GLU B 724 ALA B 727 -1 O CYS B 726 N ILE B 705 SHEET 4 AA3 8 GLY B 772 ARG B 776 -1 O TYR B 774 N LEU B 725 SHEET 5 AA3 8 LYS B 752 TRP B 761 -1 N TRP B 761 O VAL B 773 SHEET 6 AA3 8 PRO B 744 GLU B 749 -1 N GLU B 749 O LYS B 752 SHEET 7 AA3 8 GLU B 679 GLY B 684 -1 N PHE B 681 O VAL B 746 SHEET 8 AA3 8 LYS B 698 ILE B 705 -1 O LEU B 702 N CYS B 680 SHEET 1 AA4 7 GLN B 576 THR B 581 0 SHEET 2 AA4 7 HIS B 586 SER B 594 -1 O CYS B 588 N LEU B 579 SHEET 3 AA4 7 TRP B 597 THR B 600 -1 O LEU B 599 N THR B 591 SHEET 4 AA4 7 ALA B 648 LEU B 652 -1 O LEU B 650 N VAL B 598 SHEET 5 AA4 7 GLN B 631 LEU B 640 -1 N SER B 636 O LYS B 651 SHEET 6 AA4 7 TYR B 614 LEU B 618 -1 N VAL B 616 O ILE B 633 SHEET 7 AA4 7 GLN B 576 THR B 581 -1 N ARG B 580 O LYS B 615 SSBOND 1 CYS A 548 CYS A 666 1555 1555 2.05 SSBOND 2 CYS A 558 CYS A 566 1555 1555 2.04 SSBOND 3 CYS A 588 CYS A 604 1555 1555 2.03 SSBOND 4 CYS A 680 CYS A 747 1555 1555 2.03 SSBOND 5 CYS A 710 CYS A 726 1555 1555 2.03 SSBOND 6 CYS A 737 CYS A 765 1555 1555 2.04 SSBOND 7 CYS B 548 CYS B 666 1555 1555 2.07 SSBOND 8 CYS B 558 CYS B 566 1555 1555 2.05 SSBOND 9 CYS B 588 CYS B 604 1555 1555 2.05 SSBOND 10 CYS B 680 CYS B 747 1555 1555 2.04 SSBOND 11 CYS B 710 CYS B 726 1555 1555 2.03 SSBOND 12 CYS B 737 CYS B 765 1555 1555 2.03 CRYST1 48.723 50.598 92.757 90.00 93.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020524 0.000000 0.001089 0.00000 SCALE2 0.000000 0.019764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010796 0.00000