HEADER IMMUNE SYSTEM 02-FEB-22 7TUC TITLE CRYSTAL STRUCTURE OF HLA-B*44:05 (T73C) WITH 9MER EEFGRAFSF COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 21-119; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: MHC CLASS II ANTIGEN PEPTIDE; COMPND 13 CHAIN: P; COMPND 14 FRAGMENT: EEFGRAFSF; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: HLA-DPA1*02:01 DERIVED PEPTIDE 9MER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: HLA-B44:05; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET21B; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PET21B; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 GENE: HLA-DPA1; SOURCE 20 EXPRESSION_SYSTEM: SYNTHETIC CONSTRUCT; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 32630 KEYWDS TAPASIN, HISTOCOMPATIBILITY COMPLEX CLASS I, MHC-I, HLA, PEPTIDE KEYWDS 2 EDITING, PEPTIDE LOADING COMPLEX, PLC, ANTIGEN PRESENTATION, IMMUNE KEYWDS 3 RESPONSE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.JIANG,K.NATARAJAN,E.KIM,L.F.BOYD,D.H.MARGULIES REVDAT 4 13-NOV-24 7TUC 1 REMARK REVDAT 3 18-OCT-23 7TUC 1 REMARK REVDAT 2 28-SEP-22 7TUC 1 JRNL REMARK REVDAT 1 07-SEP-22 7TUC 0 JRNL AUTH J.JIANG,D.K.TAYLOR,E.J.KIM,L.F.BOYD,J.AHMAD,M.G.MAGE, JRNL AUTH 2 H.V.TRUONG,C.H.WOODWARD,N.G.SGOURAKIS,P.CRESSWELL, JRNL AUTH 3 D.H.MARGULIES,K.NATARAJAN JRNL TITL STRUCTURAL MECHANISM OF TAPASIN-MEDIATED MHC-I PEPTIDE JRNL TITL 2 LOADING IN ANTIGEN PRESENTATION. JRNL REF NAT COMMUN V. 13 5470 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36115831 JRNL DOI 10.1038/S41467-022-33153-8 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 123418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.570 REMARK 3 FREE R VALUE TEST SET COUNT : 1936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0300 - 3.0100 0.99 9434 150 0.1651 0.1715 REMARK 3 2 3.0100 - 2.3900 1.00 9208 146 0.1872 0.1909 REMARK 3 3 2.3900 - 2.0900 1.00 9134 144 0.1714 0.1894 REMARK 3 4 2.0900 - 1.9000 1.00 9077 143 0.1671 0.1864 REMARK 3 5 1.9000 - 1.7600 0.99 9026 144 0.1729 0.2118 REMARK 3 6 1.7600 - 1.6600 0.99 9020 144 0.1744 0.2001 REMARK 3 7 1.6600 - 1.5700 0.99 8921 141 0.1626 0.1829 REMARK 3 8 1.5700 - 1.5100 0.98 8795 141 0.1664 0.1857 REMARK 3 9 1.5100 - 1.4500 0.96 8682 140 0.1755 0.1971 REMARK 3 10 1.4500 - 1.4000 0.95 8610 137 0.1900 0.2018 REMARK 3 11 1.4000 - 1.3500 0.93 8314 132 0.2293 0.2608 REMARK 3 12 1.3500 - 1.3200 0.92 8271 132 0.2328 0.2470 REMARK 3 13 1.3200 - 1.2800 0.89 8013 128 0.2392 0.2652 REMARK 3 14 1.2800 - 1.2500 0.78 6977 114 0.2734 0.2606 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.107 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.086 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3283 REMARK 3 ANGLE : 0.806 4456 REMARK 3 CHIRALITY : 0.083 454 REMARK 3 PLANARITY : 0.008 588 REMARK 3 DIHEDRAL : 13.086 1232 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2096 5.7543 -30.7662 REMARK 3 T TENSOR REMARK 3 T11: 0.0585 T22: 0.0506 REMARK 3 T33: 0.0615 T12: -0.0050 REMARK 3 T13: -0.0132 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 1.4265 L22: 1.2560 REMARK 3 L33: 0.6677 L12: -0.5227 REMARK 3 L13: 0.2040 L23: 0.0266 REMARK 3 S TENSOR REMARK 3 S11: 0.0608 S12: 0.0940 S13: -0.1105 REMARK 3 S21: -0.0715 S22: -0.0485 S23: 0.1160 REMARK 3 S31: 0.0412 S32: -0.0783 S33: -0.0082 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3075 16.3093 -31.0282 REMARK 3 T TENSOR REMARK 3 T11: 0.0637 T22: 0.0509 REMARK 3 T33: 0.0517 T12: 0.0030 REMARK 3 T13: -0.0016 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.4196 L22: 0.5742 REMARK 3 L33: 0.3967 L12: -0.0458 REMARK 3 L13: 0.2233 L23: 0.0514 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: 0.1298 S13: 0.1112 REMARK 3 S21: -0.0581 S22: -0.0111 S23: -0.0325 REMARK 3 S31: -0.0269 S32: 0.0155 S33: 0.0123 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 274 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2325 15.7189 -3.8331 REMARK 3 T TENSOR REMARK 3 T11: 0.0835 T22: 0.0989 REMARK 3 T33: 0.0716 T12: 0.0127 REMARK 3 T13: 0.0074 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.4530 L22: 0.6126 REMARK 3 L33: 2.8078 L12: 0.0726 REMARK 3 L13: -0.4695 L23: 0.0700 REMARK 3 S TENSOR REMARK 3 S11: 0.0212 S12: -0.1072 S13: -0.0138 REMARK 3 S21: 0.1367 S22: 0.0299 S23: 0.0321 REMARK 3 S31: -0.1489 S32: -0.0354 S33: -0.0266 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7329 3.5268 -8.9869 REMARK 3 T TENSOR REMARK 3 T11: 0.0893 T22: 0.0872 REMARK 3 T33: 0.0625 T12: 0.0056 REMARK 3 T13: 0.0072 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 7.8909 L22: 2.3440 REMARK 3 L33: 2.0371 L12: 1.9032 REMARK 3 L13: 0.5673 L23: -0.0743 REMARK 3 S TENSOR REMARK 3 S11: 0.0137 S12: -0.1861 S13: -0.2313 REMARK 3 S21: 0.0372 S22: -0.0732 S23: -0.0919 REMARK 3 S31: -0.0779 S32: 0.1850 S33: 0.0612 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.1758 -1.7496 -10.0167 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.2023 REMARK 3 T33: 0.2901 T12: -0.0370 REMARK 3 T13: 0.0488 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 5.1246 L22: 1.6744 REMARK 3 L33: 1.1272 L12: 2.8907 REMARK 3 L13: -1.4829 L23: -0.6614 REMARK 3 S TENSOR REMARK 3 S11: -0.0650 S12: 0.1245 S13: -0.0392 REMARK 3 S21: 0.1160 S22: 0.1423 S23: 0.5952 REMARK 3 S31: 0.2578 S32: -0.6405 S33: -0.1066 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7354 0.3427 -13.1181 REMARK 3 T TENSOR REMARK 3 T11: 0.0640 T22: 0.0444 REMARK 3 T33: 0.0839 T12: 0.0048 REMARK 3 T13: -0.0043 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 6.0821 L22: 3.5432 REMARK 3 L33: 2.1184 L12: 3.4086 REMARK 3 L13: -1.5505 L23: -0.7251 REMARK 3 S TENSOR REMARK 3 S11: -0.0573 S12: 0.0128 S13: -0.0368 REMARK 3 S21: -0.0953 S22: 0.0070 S23: 0.2644 REMARK 3 S31: 0.1084 S32: -0.1510 S33: 0.0530 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5678 -4.8494 -13.6452 REMARK 3 T TENSOR REMARK 3 T11: 0.1343 T22: 0.0854 REMARK 3 T33: 0.1402 T12: 0.0150 REMARK 3 T13: 0.0417 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 6.9704 L22: 7.0888 REMARK 3 L33: 2.2691 L12: 6.4775 REMARK 3 L13: -3.2115 L23: -2.5637 REMARK 3 S TENSOR REMARK 3 S11: -0.4297 S12: 0.0546 S13: -0.4535 REMARK 3 S21: -0.3609 S22: 0.1799 S23: -0.2276 REMARK 3 S31: 0.3021 S32: -0.0091 S33: 0.2222 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2671 -11.8903 -15.0836 REMARK 3 T TENSOR REMARK 3 T11: 0.2620 T22: 0.0999 REMARK 3 T33: 0.2266 T12: -0.0014 REMARK 3 T13: 0.0529 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 2.6940 L22: 3.2565 REMARK 3 L33: 0.3407 L12: 0.7020 REMARK 3 L13: 0.1633 L23: 1.0509 REMARK 3 S TENSOR REMARK 3 S11: -0.1557 S12: 0.0258 S13: -0.4819 REMARK 3 S21: -0.2361 S22: 0.0457 S23: 0.1730 REMARK 3 S31: 0.4057 S32: 0.0754 S33: 0.0731 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6717 5.2909 -22.4499 REMARK 3 T TENSOR REMARK 3 T11: 0.1819 T22: 0.0902 REMARK 3 T33: 0.0758 T12: -0.0060 REMARK 3 T13: -0.0418 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 7.6835 L22: 5.6737 REMARK 3 L33: 0.7271 L12: 4.5243 REMARK 3 L13: 0.8408 L23: 1.8775 REMARK 3 S TENSOR REMARK 3 S11: -0.0527 S12: 0.4270 S13: -0.2482 REMARK 3 S21: -0.3332 S22: 0.1560 S23: 0.1809 REMARK 3 S31: 0.5063 S32: -0.0494 S33: -0.1049 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6569 2.9643 -16.6099 REMARK 3 T TENSOR REMARK 3 T11: 0.0751 T22: 0.0468 REMARK 3 T33: 0.0790 T12: 0.0076 REMARK 3 T13: 0.0055 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 4.1764 L22: 2.9023 REMARK 3 L33: 1.7000 L12: 2.3779 REMARK 3 L13: -1.3615 L23: -1.0657 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: -0.0337 S13: 0.0437 REMARK 3 S21: -0.1034 S22: -0.0129 S23: 0.2503 REMARK 3 S31: 0.0480 S32: -0.0595 S33: 0.0196 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0274 -11.0979 -2.5822 REMARK 3 T TENSOR REMARK 3 T11: 0.3595 T22: 0.3276 REMARK 3 T33: 0.3785 T12: -0.0699 REMARK 3 T13: 0.1267 T23: 0.0897 REMARK 3 L TENSOR REMARK 3 L11: 0.7274 L22: 1.2062 REMARK 3 L33: 0.8838 L12: 0.7995 REMARK 3 L13: -0.2781 L23: -0.8101 REMARK 3 S TENSOR REMARK 3 S11: 0.0316 S12: -0.6051 S13: -0.4130 REMARK 3 S21: 0.3083 S22: 0.0087 S23: 0.3664 REMARK 3 S31: 0.3008 S32: -0.3498 S33: -0.0377 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2032 -5.7659 -7.3216 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.1557 REMARK 3 T33: 0.2069 T12: 0.0311 REMARK 3 T13: 0.0119 T23: 0.1129 REMARK 3 L TENSOR REMARK 3 L11: 0.3539 L22: 0.6880 REMARK 3 L33: 1.2492 L12: -0.4621 REMARK 3 L13: -0.3063 L23: 0.1118 REMARK 3 S TENSOR REMARK 3 S11: 0.0186 S12: -0.2823 S13: -0.3986 REMARK 3 S21: 0.2301 S22: -0.1489 S23: -0.2050 REMARK 3 S31: 0.1489 S32: 0.1974 S33: 0.0539 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8818 -2.0729 -2.3266 REMARK 3 T TENSOR REMARK 3 T11: 0.2122 T22: 0.1943 REMARK 3 T33: 0.1422 T12: -0.0096 REMARK 3 T13: 0.0590 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 5.6042 L22: 3.3932 REMARK 3 L33: 3.5396 L12: -1.3313 REMARK 3 L13: -0.0455 L23: -0.2102 REMARK 3 S TENSOR REMARK 3 S11: -0.1455 S12: -0.6248 S13: -0.3434 REMARK 3 S21: 0.4555 S22: -0.0379 S23: 0.1908 REMARK 3 S31: 0.0515 S32: 0.0125 S33: 0.1572 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'P' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0862 15.1244 -37.1733 REMARK 3 T TENSOR REMARK 3 T11: 0.1376 T22: 0.1414 REMARK 3 T33: 0.1179 T12: 0.0127 REMARK 3 T13: 0.0093 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 7.2009 L22: 1.0605 REMARK 3 L33: 1.5134 L12: 0.4502 REMARK 3 L13: 2.4815 L23: 0.0401 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: 0.6164 S13: 0.2963 REMARK 3 S21: -0.0899 S22: -0.0198 S23: -0.1256 REMARK 3 S31: 0.0290 S32: 0.1626 S33: 0.0819 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TUC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000262903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 273 REMARK 200 PH : 6.0-8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 128295 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 46.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.03290 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.41250 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1M6O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 3350, 0.1M TRIS, 0.2M CA REMARK 280 ACETATE, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.37500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.44500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.29100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.44500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.37500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.29100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 ILE B 1 CB CG1 CG2 CD1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 89 OE2 REMARK 480 ASP A 106 OD2 REMARK 480 ARG A 108 CZ REMARK 480 GLU A 222 CD OE1 OE2 REMARK 480 ASP A 223 CG OD1 OD2 REMARK 480 LYS A 268 CD CE NZ REMARK 480 ILE B 1 N REMARK 480 GLU B 16 CG CD OE1 OE2 REMARK 480 GLU B 36 OE1 REMARK 480 GLU B 44 OE1 OE2 REMARK 480 LYS B 48 CE NZ REMARK 480 GLU B 50 OE1 OE2 REMARK 480 LYS B 58 CE NZ REMARK 480 GLU B 69 OE1 REMARK 480 GLU B 74 CD OE1 OE2 REMARK 480 LYS B 75 CD CE NZ REMARK 480 GLU B 77 OE2 REMARK 480 GLN B 89 OE1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 69.33 -158.47 REMARK 500 ASP A 29 -125.94 51.52 REMARK 500 GLN A 224 51.42 -107.19 REMARK 500 ARG A 239 -23.28 91.52 REMARK 500 TRP B 60 -2.47 78.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7TUD RELATED DB: PDB REMARK 900 RELATED ID: 7TUE RELATED DB: PDB REMARK 900 RELATED ID: 7TUF RELATED DB: PDB REMARK 900 RELATED ID: 7TUG RELATED DB: PDB REMARK 900 RELATED ID: 7TUH RELATED DB: PDB DBREF 7TUC A 1 274 PDB 7TUC 7TUC 1 274 DBREF 7TUC B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 7TUC P 1 9 UNP Q9TQB0 Q9TQB0_HUMAN 36 44 SEQADV 7TUC MET B 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 274 GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SER SEQRES 2 A 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE THR VAL GLY SEQRES 3 A 274 TYR VAL ASP ASP THR LEU PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 274 ALA THR SER PRO ARG LYS GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 274 GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG GLU THR GLN SEQRES 6 A 274 ILE SER LYS THR ASN THR GLN CYS TYR ARG GLU ASN LEU SEQRES 7 A 274 ARG THR ALA LEU ARG TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 274 SER HIS ILE ILE GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 274 PRO ASP GLY ARG LEU LEU ARG GLY TYR ASP GLN TYR ALA SEQRES 10 A 274 TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 274 SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE THR SEQRES 12 A 274 GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU GLN ASP SEQRES 13 A 274 ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU SER LEU ARG SEQRES 14 A 274 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG ALA SEQRES 15 A 274 ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO ILE SER SEQRES 16 A 274 ASP HIS GLU VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 274 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 274 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 274 PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 274 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 274 TRP SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 P 9 GLU GLU PHE GLY ARG ALA PHE SER PHE HET GOL A 301 6 HET GOL A 302 6 HET EDO A 303 4 HET EDO B 101 4 HET EDO B 102 4 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 9 HOH *454(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 ALA A 150 1 14 HELIX 4 AA4 ARG A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLU A 253 GLN A 255 5 3 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 AA1 8 HIS A 3 MET A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 ILE A 94 VAL A 103 -1 O ILE A 95 N ALA A 11 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O TYR A 123 N TYR A 116 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA2 4 THR A 228 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 4 GLU A 222 ASP A 223 0 SHEET 2 AA4 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 AA4 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 AA4 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.09 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.05 CISPEP 1 TYR A 209 PRO A 210 0 0.48 CISPEP 2 HIS B 31 PRO B 32 0 3.13 CRYST1 50.750 82.582 110.890 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019704 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012109 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009018 0.00000