HEADER PROTEIN BINDING 02-FEB-22 7TUJ TITLE NMR SOLUTION STRUCTURE OF THE PHOSPHORYLATED MUS81-BINDING REGION FROM TITLE 2 HUMAN SLX4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BTB/POZ DOMAIN-CONTAINING PROTEIN 12; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLX4, BTBD12, KIAA1784, KIAA1987; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS SAP DOMAIN, DISORDER-TO-ORDER TRANSITION, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.J.PAYLISS,S.E.REICHHELD,A.LEMAK,C.H.ARROWSMITH,S.SHARPE,H.D.M.WYATT REVDAT 2 09-NOV-22 7TUJ 1 JRNL REVDAT 1 19-OCT-22 7TUJ 0 JRNL AUTH B.J.PAYLISS,Y.W.E.TSE,S.E.REICHHELD,A.LEMAK,H.Y.YUN, JRNL AUTH 2 S.HOULISTON,A.PATEL,C.H.ARROWSMITH,S.SHARPE,H.D.M.WYATT JRNL TITL PHOSPHORYLATION OF THE DNA REPAIR SCAFFOLD SLX4 DRIVES JRNL TITL 2 FOLDING OF THE SAP DOMAIN AND ACTIVATION OF THE MUS81-EME1 JRNL TITL 3 ENDONUCLEASE. JRNL REF CELL REP V. 41 11537 2022 JRNL REFN ESSN 2211-1247 JRNL PMID 36288699 JRNL DOI 10.1016/J.CELREP.2022.111537 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TUJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000262897. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 0.125 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 500 UM [U-100% 13C; U-100% 15N] REMARK 210 PHOSPHORYLATED MUS81-BINDING REMARK 210 REGION OF HUMAN SLX4, 25 MM REMARK 210 SODIUM PHOSPHATE, 100 MM SODIUM REMARK 210 CHLORIDE, 100 UM EDTA, 100 UM REMARK 210 SODIUM AZIDE, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HN(CO)CA; 3D HNCO; REMARK 210 3D HNCA; 3D HNCACB; 3D HBHA(CO) REMARK 210 NH; 3D HNHA; 3D 1H-15N TOCSY; 3D REMARK 210 1H-13C NOESY AROMATIC; 3D 1H-13C REMARK 210 NOESY ALIPHATIC; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, FMCGUI, NMRPIPE, REMARK 210 NMRFAM-SPARKY, CCPNMR ANALYSIS REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A1536 -50.36 74.82 REMARK 500 1 LEU A1542 -46.54 -143.66 REMARK 500 1 GLU A1543 78.98 -67.72 REMARK 500 1 PRO A1545 106.96 -59.76 REMARK 500 1 LYS A1546 99.30 -52.21 REMARK 500 1 PRO A1556 99.21 -64.01 REMARK 500 1 LYS A1557 -82.46 -157.20 REMARK 500 1 GLN A1604 -53.08 -120.50 REMARK 500 1 THR A1605 -91.64 -110.43 REMARK 500 1 ASP A1609 -65.56 70.95 REMARK 500 2 PRO A1531 89.64 -63.89 REMARK 500 2 PRO A1545 99.07 -60.82 REMARK 500 2 LEU A1554 107.12 -53.01 REMARK 500 2 PRO A1556 -168.56 -69.41 REMARK 500 2 LYS A1557 89.68 -67.64 REMARK 500 2 PRO A1559 32.87 -83.62 REMARK 500 2 MET A1563 74.00 51.62 REMARK 500 2 PRO A1585 82.88 -64.37 REMARK 500 3 SER A1532 90.48 -63.41 REMARK 500 3 LYS A1538 71.69 60.61 REMARK 500 3 LEU A1542 91.22 -64.81 REMARK 500 3 PRO A1545 102.26 -55.97 REMARK 500 3 PRO A1556 40.72 -84.21 REMARK 500 3 GLU A1611 22.17 -160.42 REMARK 500 4 LYS A1538 143.87 71.13 REMARK 500 4 LYS A1551 -66.46 -137.23 REMARK 500 4 LYS A1552 -34.92 -174.66 REMARK 500 4 PRO A1556 81.92 -65.30 REMARK 500 4 LYS A1557 -72.59 -106.33 REMARK 500 4 TPO A1561 103.48 -44.98 REMARK 500 4 MET A1563 109.70 -57.72 REMARK 500 4 PRO A1585 82.02 -66.47 REMARK 500 4 GLN A1604 109.57 -58.08 REMARK 500 4 SER A1608 57.20 -96.56 REMARK 500 5 PRO A1531 89.46 -66.19 REMARK 500 5 ASN A1553 -166.52 -68.52 REMARK 500 5 PRO A1556 179.08 -49.98 REMARK 500 5 LYS A1557 99.51 -61.87 REMARK 500 5 PRO A1564 -154.65 -97.17 REMARK 500 5 HIS A1603 70.36 65.54 REMARK 500 5 THR A1605 -69.93 -144.99 REMARK 500 5 LEU A1606 81.57 -175.73 REMARK 500 5 SER A1610 19.58 57.07 REMARK 500 6 PRO A1531 107.15 -49.39 REMARK 500 6 ALA A1548 -53.55 74.92 REMARK 500 6 ASN A1549 -156.26 -72.82 REMARK 500 6 LEU A1554 107.01 65.25 REMARK 500 6 PRO A1556 37.89 -85.48 REMARK 500 6 VAL A1558 137.38 65.26 REMARK 500 6 PRO A1585 85.56 -57.03 REMARK 500 REMARK 500 THIS ENTRY HAS 172 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VWB RELATED DB: PDB REMARK 900 6VWB CONTAINS THE N-TERMINAL HELIX-HAIRPIN-HELIX DOMAIN OF MUS81, REMARK 900 WHICH DIRECTLY INTERACTS WITH THE MUS81-BINDING REGION OF SLX4 REMARK 900 RELATED ID: 30986 RELATED DB: BMRB REMARK 900 NMR SOLUTION STRUCTURE OF THE PHOSPHORYLATED MUS81-BINDING REGION REMARK 900 FROM HUMAN SLX4 DBREF 7TUJ A 1528 1613 UNP Q8IY92 SLX4_HUMAN 1528 1613 SEQRES 1 A 86 ALA GLN MET PRO SER ALA GLY GLY ALA GLN LYS PRO GLU SEQRES 2 A 86 GLY LEU GLU TPO PRO LYS GLY ALA ASN ARG LYS LYS ASN SEQRES 3 A 86 LEU PRO PRO LYS VAL PRO ILE TPO PRO MET PRO GLN TYR SEQRES 4 A 86 SER ILE MET GLU TPO PRO VAL LEU LYS LYS GLU LEU ASP SEQRES 5 A 86 ARG PHE GLY VAL ARG PRO LEU PRO LYS ARG GLN MET VAL SEQRES 6 A 86 LEU LYS LEU LYS GLU ILE PHE GLN TYR THR HIS GLN THR SEQRES 7 A 86 LEU ASP SER ASP SER GLU ASP GLU MODRES 7TUJ TPO A 1544 THR MODIFIED RESIDUE MODRES 7TUJ TPO A 1561 THR MODIFIED RESIDUE MODRES 7TUJ TPO A 1571 THR MODIFIED RESIDUE HET TPO A1544 17 HET TPO A1561 17 HET TPO A1571 17 HETNAM TPO PHOSPHOTHREONINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO 3(C4 H10 N O6 P) HELIX 1 AA1 GLN A 1565 MET A 1569 5 5 HELIX 2 AA2 GLU A 1570 PHE A 1581 1 12 HELIX 3 AA3 PRO A 1587 HIS A 1603 1 17 LINK C GLU A1543 N TPO A1544 1555 1555 1.34 LINK C TPO A1544 N PRO A1545 1555 1555 1.38 LINK C ILE A1560 N TPO A1561 1555 1555 1.36 LINK C TPO A1561 N PRO A1562 1555 1555 1.38 LINK C GLU A1570 N TPO A1571 1555 1555 1.35 LINK C TPO A1571 N PRO A1572 1555 1555 1.40 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1