HEADER LYASE 15-FEB-22 7TZ8 TITLE SOLUTION NMR STRUCTURE OF THE PBS LINKER POLYPEPTIDE DOMAIN (FRAGMENT TITLE 2 254-400) OF PHYCOBILISOME LINKER PROTEIN APCE FROM SYNECHOCYSTIS SP. TITLE 3 PCC 6803 REFINED WITH NH RDCS. NORTHEAST STRUCTURAL GENOMICS TITLE 4 CONSORTIUM TARGET SGR209C COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHYCOBILIPROTEIN APCE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHYCOBILISOME LCM CORE-MEMBRANE LINKER POLYPEPTIDE, COMPND 5 PHYCOBILISOME CORE-MEMBRANE LINKER PHYCOBILIPROTEIN APCE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA); SOURCE 3 ORGANISM_TAXID: 1111708; SOURCE 4 STRAIN: PCC 6803 / KAZUSA; SOURCE 5 GENE: APCE, SLR0335; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: PMGK; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET21-23C KEYWDS SLR0335, LYASE, STRUCTURAL GENOMICS, PSI-BIOLOGY, NORTHEAST KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.A.RAMELOT,R.TEJERO,G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (NESG) REVDAT 2 15-MAY-24 7TZ8 1 REMARK REVDAT 1 10-AUG-22 7TZ8 0 JRNL AUTH R.TEJERO,Y.J.HUANG,T.A.RAMELOT,G.T.MONTELIONE JRNL TITL ALPHAFOLD MODELS OF SMALL PROTEINS RIVAL THE ACCURACY OF JRNL TITL 2 SOLUTION NMR STRUCTURES. JRNL REF FRONT MOL BIOSCI V. 9 77000 2022 JRNL REFN ESSN 2296-889X JRNL PMID 35769913 JRNL DOI 10.3389/FMOLB.2022.877000 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS WATER REFINEMENT REMARK 4 REMARK 4 7TZ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263170. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 20 MM MES, 100 MM SODIUM REMARK 210 CHLORIDE, 5 MM CALCIUM CHLORIDE, REMARK 210 100 MM DTT, 0.02 % SODIUM AZIDE, REMARK 210 1.4 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1D 1H REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.98.14, NMRFAM-SPARKY REMARK 210 1.370, PDBSTAT 5.21.6 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -47.09 -156.33 REMARK 500 1 ASN A 6 -78.80 61.84 REMARK 500 1 GLN A 12 92.21 -64.03 REMARK 500 1 PRO A 18 92.31 -56.30 REMARK 500 1 ARG A 39 96.58 60.01 REMARK 500 1 ASP A 40 66.98 -170.55 REMARK 500 1 TYR A 45 -73.89 -59.89 REMARK 500 1 SER A 46 -164.19 53.04 REMARK 500 1 GLN A 47 -77.42 65.20 REMARK 500 1 PHE A 80 -50.67 -127.76 REMARK 500 1 HIS A 96 -66.94 -91.07 REMARK 500 1 ARG A 100 -70.10 -158.56 REMARK 500 1 SER A 103 -60.53 -130.47 REMARK 500 1 PRO A 143 86.34 -45.50 REMARK 500 1 LEU A 148 87.33 55.00 REMARK 500 1 HIS A 151 51.22 -144.16 REMARK 500 1 HIS A 154 151.15 76.62 REMARK 500 2 PHE A 5 90.54 53.13 REMARK 500 2 GLN A 12 92.60 60.00 REMARK 500 2 PRO A 18 91.33 -62.20 REMARK 500 2 SER A 46 131.05 -173.74 REMARK 500 2 PHE A 81 -33.57 -150.43 REMARK 500 2 ARG A 100 -75.16 -157.64 REMARK 500 2 SER A 117 -67.10 -94.29 REMARK 500 2 PRO A 143 92.64 -57.26 REMARK 500 2 GLU A 149 -61.52 -122.16 REMARK 500 2 HIS A 151 -76.68 -160.77 REMARK 500 2 HIS A 152 166.70 61.53 REMARK 500 2 HIS A 153 88.36 62.93 REMARK 500 2 HIS A 154 -39.53 -139.61 REMARK 500 3 ASN A 6 84.22 55.73 REMARK 500 3 ALA A 9 33.27 -97.83 REMARK 500 3 ARG A 11 -64.64 -125.15 REMARK 500 3 PRO A 18 82.70 -69.09 REMARK 500 3 GLU A 38 -3.81 71.59 REMARK 500 3 ASP A 40 78.42 -69.45 REMARK 500 3 PHE A 80 -62.31 -120.42 REMARK 500 3 ARG A 146 99.56 59.56 REMARK 500 3 LEU A 148 -157.09 61.99 REMARK 500 4 ALA A 8 -73.88 51.33 REMARK 500 4 LYS A 10 -164.08 62.42 REMARK 500 4 ARG A 11 61.00 -105.36 REMARK 500 4 GLU A 38 -8.91 82.25 REMARK 500 4 LYS A 43 -76.58 42.69 REMARK 500 4 PHE A 81 -60.09 -138.28 REMARK 500 4 PHE A 84 -95.52 -94.61 REMARK 500 4 ILE A 85 159.56 173.86 REMARK 500 4 HIS A 96 -62.38 -94.90 REMARK 500 4 HIS A 150 18.46 58.90 REMARK 500 4 HIS A 152 143.60 -171.15 REMARK 500 REMARK 500 THIS ENTRY HAS 234 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17031 RELATED DB: BMRB REMARK 900 RELATED ID: 2LO6 RELATED DB: PDB REMARK 900 REFINED WITH NH RDCS REMARK 900 RELATED ID: NESG-SGR209C RELATED DB: TARGETTRACK DBREF 7TZ8 A 1 148 UNP Q55544 APCE_SYNY3 254 401 SEQADV 7TZ8 GLU A 149 UNP Q55544 EXPRESSION TAG SEQADV 7TZ8 HIS A 150 UNP Q55544 EXPRESSION TAG SEQADV 7TZ8 HIS A 151 UNP Q55544 EXPRESSION TAG SEQADV 7TZ8 HIS A 152 UNP Q55544 EXPRESSION TAG SEQADV 7TZ8 HIS A 153 UNP Q55544 EXPRESSION TAG SEQADV 7TZ8 HIS A 154 UNP Q55544 EXPRESSION TAG SEQADV 7TZ8 HIS A 155 UNP Q55544 EXPRESSION TAG SEQRES 1 A 155 PRO GLN SER TYR PHE ASN ALA ALA ALA LYS ARG GLN LYS SEQRES 2 A 155 TYR ALA MET LYS PRO GLY LEU SER ALA LEU GLU LYS ASN SEQRES 3 A 155 ALA VAL ILE LYS ALA ALA TYR ARG GLN ILE PHE GLU ARG SEQRES 4 A 155 ASP ILE THR LYS ALA TYR SER GLN SER ILE SER TYR LEU SEQRES 5 A 155 GLU SER GLN VAL ARG ASN GLY ASP ILE SER MET LYS GLU SEQRES 6 A 155 PHE VAL ARG ARG LEU ALA LYS SER PRO LEU TYR ARG LYS SEQRES 7 A 155 GLN PHE PHE GLU PRO PHE ILE ASN SER ARG ALA LEU GLU SEQRES 8 A 155 LEU ALA PHE ARG HIS ILE LEU GLY ARG GLY PRO SER SER SEQRES 9 A 155 ARG GLU GLU VAL GLN LYS TYR PHE SER ILE VAL SER SER SEQRES 10 A 155 GLY GLY LEU PRO ALA LEU VAL ASP ALA LEU VAL ASP SER SEQRES 11 A 155 GLN GLU TYR ALA ASP TYR PHE GLY GLU GLU THR VAL PRO SEQRES 12 A 155 TYR LEU ARG GLY LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 SER A 21 PHE A 37 1 17 HELIX 2 AA2 GLN A 47 GLY A 59 1 13 HELIX 3 AA3 SER A 62 ALA A 71 1 10 HELIX 4 AA4 SER A 73 GLN A 79 1 7 HELIX 5 AA5 ILE A 85 LEU A 98 1 14 HELIX 6 AA6 SER A 104 GLY A 118 1 15 HELIX 7 AA7 GLY A 118 SER A 130 1 13 HELIX 8 AA8 SER A 130 PHE A 137 1 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1