HEADER RNA 16-FEB-22 7TZS TITLE CRYSTAL STRUCTURE OF THE E. COLI THIM RIBOSWITCH IN COMPLEX WITH TITLE 2 QUINOXALIN-6-YLMETHANAMINE (COMPOUND 17) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (80-MER); COMPND 3 CHAIN: X, Y; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 4 ORGANISM_TAXID: 562 KEYWDS THIM TPP RIBOSWITCH, RNA EXPDTA X-RAY DIFFRACTION AUTHOR A.NUTHANAKANTI,A.SERGANOV REVDAT 2 18-OCT-23 7TZS 1 REMARK REVDAT 1 25-MAY-22 7TZS 0 JRNL AUTH M.J.ZELLER,O.FAVOROV,K.LI,A.NUTHANAKANTI,D.HUSSEIN, JRNL AUTH 2 A.MICHAUD,D.A.LAFONTAINE,S.BUSAN,A.SERGANOV,J.AUBE,K.M.WEEKS JRNL TITL SHAPE-ENABLED FRAGMENT-BASED LIGAND DISCOVERY FOR RNA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 60119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35561226 JRNL DOI 10.1073/PNAS.2122660119 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14-3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 21817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7800 - 4.4200 0.99 2731 136 0.1523 0.1911 REMARK 3 2 4.4200 - 3.5100 1.00 2638 142 0.1739 0.2344 REMARK 3 3 3.5100 - 3.0700 1.00 2575 145 0.2032 0.2339 REMARK 3 4 3.0700 - 2.7900 1.00 2609 116 0.2559 0.2672 REMARK 3 5 2.7900 - 2.5900 1.00 2595 141 0.2878 0.3232 REMARK 3 6 2.5900 - 2.4300 1.00 2592 135 0.2727 0.3335 REMARK 3 7 2.4300 - 2.3100 1.00 2553 138 0.2694 0.3336 REMARK 3 8 2.3100 - 2.2100 0.95 2451 120 0.2850 0.3196 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.311 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3850 REMARK 3 ANGLE : 1.115 6001 REMARK 3 CHIRALITY : 0.056 792 REMARK 3 PLANARITY : 0.009 162 REMARK 3 DIHEDRAL : 18.201 1940 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 10 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3380 -9.1672 0.0465 REMARK 3 T TENSOR REMARK 3 T11: 0.2130 T22: 0.1597 REMARK 3 T33: 0.2292 T12: -0.0192 REMARK 3 T13: 0.0188 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.3490 L22: 1.7968 REMARK 3 L33: 1.0746 L12: -0.6045 REMARK 3 L13: 0.0099 L23: -0.4619 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: 0.0563 S13: -0.0375 REMARK 3 S21: -0.0084 S22: -0.0049 S23: 0.0514 REMARK 3 S31: -0.0665 S32: 0.0918 S33: -0.0139 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'Y' AND (RESID 10 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2861 9.2344 55.0954 REMARK 3 T TENSOR REMARK 3 T11: 0.4315 T22: 0.7183 REMARK 3 T33: 0.3710 T12: -0.0317 REMARK 3 T13: 0.0235 T23: -0.0788 REMARK 3 L TENSOR REMARK 3 L11: 0.6698 L22: 1.3360 REMARK 3 L33: 1.3221 L12: 0.2395 REMARK 3 L13: 0.4643 L23: -0.2585 REMARK 3 S TENSOR REMARK 3 S11: -0.1744 S12: 0.2076 S13: -0.1372 REMARK 3 S21: -0.1271 S22: 0.2108 S23: -0.0719 REMARK 3 S31: -0.1295 S32: -0.0110 S33: -0.0213 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : NULL REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : NULL REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TZS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263223. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8-6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21835 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 29.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.72900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.14_3260 REMARK 200 STARTING MODEL: 2GDI REMARK 200 REMARK 200 REMARK: SHAPELESS ROD-CLUSTERS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TPP RIBOSWITCH RNA (0.2 MM) 17 (2 MM) REMARK 280 WERE HEATED IN A BUFFER CONTAINING 50 MM POTASSIUM ACETATE (PH REMARK 280 6.8) AND 5 (COMPOUND 17) MM MGCL2. RESERVOIR SOLUTION CONTAINING REMARK 280 0.1 M SODIUM ACETATE (PH 4.8), 0.35 M AMMONIUM ACETATE, AND 28% REMARK 280 (V/V) PEG4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 74.36700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 15.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 74.36700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 15.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH X 309 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 C X 55 C4 N4 C5 REMARK 470 U X 79 O2' N1 C2 O2 N3 C4 O4 REMARK 470 U X 79 C5 C6 REMARK 470 GTP Y 10 PG O1G O2G O3G REMARK 470 U Y 46 O2' N1 C2 O2 N3 C4 O4 REMARK 470 U Y 46 C5 C6 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K X 106 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U X 20 O3' REMARK 620 2 G X 21 OP2 45.1 REMARK 620 3 HOH X 285 O 148.4 150.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K X 105 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G X 21 O2' REMARK 620 2 U X 71 O2' 77.8 REMARK 620 3 U X 71 O2 143.2 77.2 REMARK 620 4 C X 73 OP1 122.8 92.9 85.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA X 109 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G X 40 O6 REMARK 620 2 HOH X 270 O 91.2 REMARK 620 3 HOH X 280 O 110.2 89.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K X 107 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C X 57 O2' REMARK 620 2 C X 57 O2 80.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG X 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U X 59 O4 REMARK 620 2 G X 60 O6 80.7 REMARK 620 3 G X 72 O6 156.5 75.9 REMARK 620 4 G X 78 O6 86.7 81.3 91.9 REMARK 620 5 HOH X 277 O 111.6 163.9 91.9 88.8 REMARK 620 6 HOH X 286 O 97.7 94.0 81.9 173.1 94.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG X 103 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH X 240 O REMARK 620 2 HOH X 265 O 168.9 REMARK 620 3 HOH X 269 O 87.5 84.4 REMARK 620 4 HOH X 296 O 95.0 92.7 176.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG Y 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U Y 59 O4 REMARK 620 2 G Y 60 O6 77.0 REMARK 620 3 G Y 72 O6 159.5 82.8 REMARK 620 4 G Y 78 O6 89.7 84.4 91.8 REMARK 620 5 HOH Y 212 O 103.2 90.6 73.3 164.8 REMARK 620 N 1 2 3 4 DBREF 7TZS X 10 89 PDB 7TZS 7TZS 10 89 DBREF 7TZS Y 10 89 PDB 7TZS 7TZS 10 89 SEQRES 1 X 80 GTP G A C U C G G G G U G C SEQRES 2 X 80 C C U U C U G C G U G A A SEQRES 3 X 80 G G C U G A G A A A U A C SEQRES 4 X 80 C C G U A U C A C C U G A SEQRES 5 X 80 U C U G G A U A A U G C C SEQRES 6 X 80 A G C G U A G G G A A G U SEQRES 7 X 80 U CCC SEQRES 1 Y 80 GTP G A C U C G G G G U G C SEQRES 2 Y 80 C C U U C U G C G U G A A SEQRES 3 Y 80 G G C U G A G A A A U A C SEQRES 4 Y 80 C C G U A U C A C C U G A SEQRES 5 Y 80 U C U G G A U A A U G C C SEQRES 6 Y 80 A G C G U A G G G A A G U SEQRES 7 Y 80 U CCC HET GTP X 10 32 HET CCC X 89 23 HET GTP Y 10 28 HET CCC Y 89 23 HET KX3 X 101 12 HET MG X 102 1 HET MG X 103 1 HET MG X 104 1 HET K X 105 1 HET K X 106 1 HET K X 107 1 HET K X 108 1 HET NA X 109 1 HET KX3 Y 101 12 HET MG Y 102 1 HET MG Y 103 1 HET K Y 104 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE HETNAM KX3 1-(QUINOXALIN-6-YL)METHANAMINE HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM NA SODIUM ION FORMUL 1 GTP 2(C10 H16 N5 O14 P3) FORMUL 1 CCC 2(C9 H13 N3 O10 P2) FORMUL 3 KX3 2(C9 H9 N3) FORMUL 4 MG 5(MG 2+) FORMUL 7 K 5(K 1+) FORMUL 11 NA NA 1+ FORMUL 16 HOH *126(H2 O) LINK O3' GTP X 10 P G X 11 1555 1555 1.61 LINK O3' U X 88 P CCC X 89 1555 1555 1.57 LINK O3' GTP Y 10 P G Y 11 1555 1555 1.61 LINK O3' U Y 88 P CCC Y 89 1555 1555 1.61 LINK O3' U X 20 K K X 106 1555 1555 3.18 LINK O2' G X 21 K K X 105 1555 1555 2.78 LINK OP2 G X 21 K K X 106 1555 1555 3.32 LINK O6 G X 40 NA NA X 109 1555 1555 2.69 LINK O2' C X 57 K K X 107 1555 1555 2.86 LINK O2 C X 57 K K X 107 1555 1555 2.93 LINK O4 U X 59 MG MG X 102 1555 1555 2.35 LINK O6 G X 60 MG MG X 102 1555 1555 2.44 LINK O2' U X 71 K K X 105 1555 1555 2.69 LINK O2 U X 71 K K X 105 1555 1555 3.24 LINK O6 G X 72 MG MG X 102 1555 1555 2.26 LINK OP1 C X 73 K K X 105 1555 1555 2.64 LINK O6 G X 78 MG MG X 102 1555 1555 2.43 LINK MG MG X 102 O HOH X 277 1555 1555 2.41 LINK MG MG X 102 O HOH X 286 1555 1555 2.59 LINK MG MG X 103 O HOH X 240 1555 1555 2.52 LINK MG MG X 103 O HOH X 265 1555 1555 2.35 LINK MG MG X 103 O HOH X 269 1555 1555 2.29 LINK MG MG X 103 O HOH X 296 1555 1555 2.47 LINK MG MG X 104 O HOH X 269 1555 1555 2.58 LINK K K X 106 O HOH X 285 1555 1555 3.39 LINK NA NA X 109 O HOH X 270 1555 1555 2.68 LINK NA NA X 109 O HOH X 280 1555 1555 2.84 LINK O4 U Y 59 MG MG Y 102 1555 1555 2.43 LINK O6 G Y 60 MG MG Y 102 1555 1555 2.50 LINK O6 G Y 72 MG MG Y 102 1555 1555 2.16 LINK O6 G Y 78 MG MG Y 102 1555 1555 2.57 LINK MG MG Y 102 O HOH Y 212 1555 1555 2.58 LINK MG MG Y 103 O HOH Y 207 1555 1555 2.51 CRYST1 148.734 30.400 95.570 90.00 93.51 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006723 0.000000 0.000413 0.00000 SCALE2 0.000000 0.032895 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010483 0.00000 MTRIX1 1 0.316776 0.158978 -0.935082 25.36116 1 MTRIX2 1 0.131815 -0.983666 -0.122583 2.38047 1 MTRIX3 1 -0.939297 -0.084427 -0.332557 37.93124 1 HETATM 1 PG GTP X 10 -26.007 -10.260 -19.228 1.00 91.51 P ANISOU 1 PG GTP X 10 12304 11506 10959 471 -975 -496 P HETATM 2 O1G GTP X 10 -25.844 -8.804 -19.607 1.00 80.23 O ANISOU 2 O1G GTP X 10 10905 10139 9440 516 -894 -374 O HETATM 3 O2G GTP X 10 -27.432 -10.520 -18.799 1.00 80.63 O ANISOU 3 O2G GTP X 10 10818 10068 9749 413 -1117 -513 O HETATM 4 O3G GTP X 10 -25.090 -10.602 -18.073 1.00 72.27 O ANISOU 4 O3G GTP X 10 9814 9029 8616 411 -833 -488 O HETATM 5 O3B GTP X 10 -25.698 -11.192 -20.511 1.00 74.16 O ANISOU 5 O3B GTP X 10 10245 9346 8588 555 -1071 -615 O HETATM 6 PB GTP X 10 -24.825 -10.713 -21.779 1.00 75.59 P ANISOU 6 PB GTP X 10 10578 9627 8516 673 -1008 -594 P HETATM 7 O1B GTP X 10 -25.211 -9.305 -22.176 1.00 72.52 O ANISOU 7 O1B GTP X 10 10193 9292 8068 707 -989 -468 O HETATM 8 O2B GTP X 10 -25.054 -11.663 -22.928 1.00 73.33 O ANISOU 8 O2B GTP X 10 10414 9358 8090 750 -1158 -727 O HETATM 9 O3A GTP X 10 -23.287 -10.798 -21.292 1.00 72.08 O ANISOU 9 O3A GTP X 10 10143 9194 8050 672 -802 -564 O HETATM 10 PA GTP X 10 -22.369 -9.509 -20.985 1.00 72.36 P ANISOU 10 PA GTP X 10 10157 9274 8064 670 -606 -415 P HETATM 11 O1A GTP X 10 -21.491 -9.822 -19.796 1.00 71.58 O ANISOU 11 O1A GTP X 10 9976 9132 8091 598 -481 -406 O HETATM 12 O2A GTP X 10 -23.185 -8.255 -20.756 1.00 68.29 O ANISOU 12 O2A GTP X 10 9583 8754 7609 640 -620 -308 O HETATM 13 O5' GTP X 10 -21.483 -9.373 -22.322 1.00 68.89 O ANISOU 13 O5' GTP X 10 9861 8929 7385 795 -538 -403 O HETATM 14 C5' GTP X 10 -20.398 -10.236 -22.575 1.00 70.21 C ANISOU 14 C5' GTP X 10 10088 9117 7473 844 -458 -466 C HETATM 15 C4' GTP X 10 -19.735 -9.836 -23.893 1.00 72.28 C ANISOU 15 C4' GTP X 10 10485 9478 7500 974 -383 -423 C HETATM 16 O4' GTP X 10 -20.680 -9.937 -24.933 1.00 72.24 O ANISOU 16 O4' GTP X 10 10584 9503 7362 1047 -545 -480 O HETATM 17 C3' GTP X 10 -19.276 -8.392 -23.972 1.00 66.84 C ANISOU 17 C3' GTP X 10 9775 8836 6784 977 -240 -252 C HETATM 18 O3' GTP X 10 -17.995 -8.189 -23.416 1.00 65.99 O ANISOU 18 O3' GTP X 10 9608 8734 6730 947 -54 -181 O HETATM 19 C2' GTP X 10 -19.241 -8.104 -25.462 1.00 67.24 C ANISOU 19 C2' GTP X 10 9978 8980 6589 1116 -245 -228 C HETATM 20 O2' GTP X 10 -18.060 -8.658 -25.997 1.00 72.17 O ANISOU 20 O2' GTP X 10 10678 9657 7085 1202 -119 -248 O HETATM 21 C1' GTP X 10 -20.460 -8.918 -25.885 1.00 70.28 C ANISOU 21 C1' GTP X 10 10419 9342 6941 1137 -476 -369 C HETATM 22 N9 GTP X 10 -21.607 -7.995 -25.851 1.00 69.07 N ANISOU 22 N9 GTP X 10 10224 9179 6842 1104 -580 -300 N HETATM 23 C8 GTP X 10 -22.662 -8.063 -24.981 1.00 71.68 C ANISOU 23 C8 GTP X 10 10438 9432 7367 1001 -702 -330 C HETATM 24 N7 GTP X 10 -23.507 -7.040 -25.244 1.00 71.54 N ANISOU 24 N7 GTP X 10 10408 9430 7344 1011 -762 -239 N HETATM 25 C5 GTP X 10 -23.007 -6.316 -26.270 1.00 69.70 C ANISOU 25 C5 GTP X 10 10287 9282 6914 1117 -682 -149 C HETATM 26 C6 GTP X 10 -23.467 -5.181 -26.930 1.00 68.67 C ANISOU 26 C6 GTP X 10 10198 9198 6694 1176 -694 -29 C HETATM 27 O6 GTP X 10 -24.520 -4.644 -26.599 1.00 67.48 O ANISOU 27 O6 GTP X 10 9973 9011 6655 1135 -794 8 O HETATM 28 N1 GTP X 10 -22.730 -4.652 -27.968 1.00 69.80 N ANISOU 28 N1 GTP X 10 10467 9429 6626 1291 -583 59 N HETATM 29 C2 GTP X 10 -21.543 -5.242 -28.357 1.00 67.39 C ANISOU 29 C2 GTP X 10 10239 9168 6198 1348 -457 26 C HETATM 30 N2 GTP X 10 -20.836 -4.715 -29.357 1.00 63.86 N ANISOU 30 N2 GTP X 10 9907 8808 5547 1465 -334 125 N HETATM 31 N3 GTP X 10 -21.090 -6.368 -27.691 1.00 68.75 N ANISOU 31 N3 GTP X 10 10365 9293 6464 1291 -448 -98 N HETATM 32 C4 GTP X 10 -21.809 -6.901 -26.663 1.00 69.81 C ANISOU 32 C4 GTP X 10 10381 9337 6805 1176 -562 -184 C