data_7U4K # _entry.id 7U4K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7U4K pdb_00007u4k 10.2210/pdb7u4k/pdb WWPDB D_1000263525 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7U4K _pdbx_database_status.recvd_initial_deposition_date 2022-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Forouhar, F.' 1 ? 'Liu, H.' 2 ? 'Lin, A.J.' 3 ? 'Wang, Q.' 4 ? 'Xia, X.' 5 ? 'Soni, R.K.' 6 ? 'Stockwell, B.R.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Chem Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2451-9456 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 29 _citation.language ? _citation.page_first 1680 _citation.page_last 1693.e9 _citation.title 'Small-molecule allosteric inhibitors of GPX4.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2022.11.003 _citation.pdbx_database_id_PubMed 36423641 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, H.' 1 ? primary 'Forouhar, F.' 2 ? primary 'Lin, A.J.' 3 ? primary 'Wang, Q.' 4 ? primary 'Polychronidou, V.' 5 ? primary 'Soni, R.K.' 6 ? primary 'Xia, X.' 7 ? primary 'Stockwell, B.R.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 102.500 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7U4K _cell.details ? _cell.formula_units_Z ? _cell.length_a 82.565 _cell.length_a_esd ? _cell.length_b 69.304 _cell.length_b_esd ? _cell.length_c 32.983 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7U4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phospholipid hydroperoxide glutathione peroxidase' 21869.051 1 1.11.1.12 'U46C, R152H' ? ? 2 non-polymer syn '2-chloro-N-(3-chloro-4-methoxyphenyl)-N-[(1R)-2-oxo-2-[(2-phenylethyl)amino]-1-(thiophen-2-yl)ethyl]acetamide' 477.403 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 136 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PHGPx,Glutathione peroxidase 4,GSHPx-4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMLEAASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVD LHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNF TKFLIDKNGCVVKHYGPMEEPLVIEKDLPHYF ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMLEAASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVD LHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNF TKFLIDKNGCVVKHYGPMEEPLVIEKDLPHYF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 LEU n 1 23 GLU n 1 24 ALA n 1 25 ALA n 1 26 SER n 1 27 ARG n 1 28 ASP n 1 29 ASP n 1 30 TRP n 1 31 ARG n 1 32 CYS n 1 33 ALA n 1 34 ARG n 1 35 SER n 1 36 MET n 1 37 HIS n 1 38 GLU n 1 39 PHE n 1 40 SER n 1 41 ALA n 1 42 LYS n 1 43 ASP n 1 44 ILE n 1 45 ASP n 1 46 GLY n 1 47 HIS n 1 48 MET n 1 49 VAL n 1 50 ASN n 1 51 LEU n 1 52 ASP n 1 53 LYS n 1 54 TYR n 1 55 ARG n 1 56 GLY n 1 57 PHE n 1 58 VAL n 1 59 CYS n 1 60 ILE n 1 61 VAL n 1 62 THR n 1 63 ASN n 1 64 VAL n 1 65 ALA n 1 66 SER n 1 67 GLN n 1 68 CYS n 1 69 GLY n 1 70 LYS n 1 71 THR n 1 72 GLU n 1 73 VAL n 1 74 ASN n 1 75 TYR n 1 76 THR n 1 77 GLN n 1 78 LEU n 1 79 VAL n 1 80 ASP n 1 81 LEU n 1 82 HIS n 1 83 ALA n 1 84 ARG n 1 85 TYR n 1 86 ALA n 1 87 GLU n 1 88 CYS n 1 89 GLY n 1 90 LEU n 1 91 ARG n 1 92 ILE n 1 93 LEU n 1 94 ALA n 1 95 PHE n 1 96 PRO n 1 97 CYS n 1 98 ASN n 1 99 GLN n 1 100 PHE n 1 101 GLY n 1 102 LYS n 1 103 GLN n 1 104 GLU n 1 105 PRO n 1 106 GLY n 1 107 SER n 1 108 ASN n 1 109 GLU n 1 110 GLU n 1 111 ILE n 1 112 LYS n 1 113 GLU n 1 114 PHE n 1 115 ALA n 1 116 ALA n 1 117 GLY n 1 118 TYR n 1 119 ASN n 1 120 VAL n 1 121 LYS n 1 122 PHE n 1 123 ASP n 1 124 MET n 1 125 PHE n 1 126 SER n 1 127 LYS n 1 128 ILE n 1 129 CYS n 1 130 VAL n 1 131 ASN n 1 132 GLY n 1 133 ASP n 1 134 ASP n 1 135 ALA n 1 136 HIS n 1 137 PRO n 1 138 LEU n 1 139 TRP n 1 140 LYS n 1 141 TRP n 1 142 MET n 1 143 LYS n 1 144 ILE n 1 145 GLN n 1 146 PRO n 1 147 LYS n 1 148 GLY n 1 149 LYS n 1 150 GLY n 1 151 ILE n 1 152 LEU n 1 153 GLY n 1 154 ASN n 1 155 ALA n 1 156 ILE n 1 157 LYS n 1 158 TRP n 1 159 ASN n 1 160 PHE n 1 161 THR n 1 162 LYS n 1 163 PHE n 1 164 LEU n 1 165 ILE n 1 166 ASP n 1 167 LYS n 1 168 ASN n 1 169 GLY n 1 170 CYS n 1 171 VAL n 1 172 VAL n 1 173 LYS n 1 174 HIS n 1 175 TYR n 1 176 GLY n 1 177 PRO n 1 178 MET n 1 179 GLU n 1 180 GLU n 1 181 PRO n 1 182 LEU n 1 183 VAL n 1 184 ILE n 1 185 GLU n 1 186 LYS n 1 187 ASP n 1 188 LEU n 1 189 PRO n 1 190 HIS n 1 191 TYR n 1 192 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 192 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GPX4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GPX4_HUMAN _struct_ref.pdbx_db_accession P36969 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVI EKDLPHYF ; _struct_ref.pdbx_align_begin 30 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7U4K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 25 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 192 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P36969 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 197 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 170 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7U4K MET A 1 ? UNP P36969 ? ? 'initiating methionine' -21 1 1 7U4K GLY A 2 ? UNP P36969 ? ? 'expression tag' -20 2 1 7U4K SER A 3 ? UNP P36969 ? ? 'expression tag' -19 3 1 7U4K SER A 4 ? UNP P36969 ? ? 'expression tag' -18 4 1 7U4K HIS A 5 ? UNP P36969 ? ? 'expression tag' -17 5 1 7U4K HIS A 6 ? UNP P36969 ? ? 'expression tag' -16 6 1 7U4K HIS A 7 ? UNP P36969 ? ? 'expression tag' -15 7 1 7U4K HIS A 8 ? UNP P36969 ? ? 'expression tag' -14 8 1 7U4K HIS A 9 ? UNP P36969 ? ? 'expression tag' -13 9 1 7U4K HIS A 10 ? UNP P36969 ? ? 'expression tag' -12 10 1 7U4K SER A 11 ? UNP P36969 ? ? 'expression tag' -11 11 1 7U4K SER A 12 ? UNP P36969 ? ? 'expression tag' -10 12 1 7U4K GLY A 13 ? UNP P36969 ? ? 'expression tag' -9 13 1 7U4K LEU A 14 ? UNP P36969 ? ? 'expression tag' -8 14 1 7U4K VAL A 15 ? UNP P36969 ? ? 'expression tag' -7 15 1 7U4K PRO A 16 ? UNP P36969 ? ? 'expression tag' -6 16 1 7U4K ARG A 17 ? UNP P36969 ? ? 'expression tag' -5 17 1 7U4K GLY A 18 ? UNP P36969 ? ? 'expression tag' -4 18 1 7U4K SER A 19 ? UNP P36969 ? ? 'expression tag' -3 19 1 7U4K HIS A 20 ? UNP P36969 ? ? 'expression tag' -2 20 1 7U4K MET A 21 ? UNP P36969 ? ? 'expression tag' -1 21 1 7U4K LEU A 22 ? UNP P36969 ? ? 'expression tag' 0 22 1 7U4K GLU A 23 ? UNP P36969 ? ? 'expression tag' 1 23 1 7U4K ALA A 24 ? UNP P36969 ? ? 'expression tag' 2 24 1 7U4K CYS A 68 ? UNP P36969 SEC 73 conflict 46 25 1 7U4K HIS A 174 ? UNP P36969 ARG 179 conflict 152 26 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 L9C non-polymer . '2-chloro-N-(3-chloro-4-methoxyphenyl)-N-[(1R)-2-oxo-2-[(2-phenylethyl)amino]-1-(thiophen-2-yl)ethyl]acetamide' ? 'C23 H22 Cl2 N2 O3 S' 477.403 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEC 'L-peptide linking' y SELENOCYSTEINE ? 'C3 H7 N O2 Se' 168.053 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7U4K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '8% Tacsimate and 20% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-28 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7U4K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.59 _reflns.d_resolution_low 52.55 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23878 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.59 _reflns_shell.d_res_low 1.62 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1007 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.635 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 84.1 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.110 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 121.540 _refine.B_iso_mean 35.2649 _refine.B_iso_min 16.950 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7U4K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.6900 _refine.ls_d_res_low 52.5500 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20242 _refine.ls_number_reflns_R_free 1997 _refine.ls_number_reflns_R_work 18245 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.3700 _refine.ls_percent_reflns_R_free 9.8700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1556 _refine.ls_R_factor_R_free 0.1811 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1528 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.390 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7L8L _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.9000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.6900 _refine_hist.d_res_low 52.5500 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 1514 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 166 _refine_hist.pdbx_B_iso_mean_ligand 92.92 _refine_hist.pdbx_B_iso_mean_solvent 45.66 _refine_hist.pdbx_number_atoms_protein 1340 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.6900 1.7300 1480 . 154 1326 99.0000 . . . 0.0000 0.2560 . . . . . . . 14 . . . 0.2850 'X-RAY DIFFRACTION' 1.7300 1.7800 1390 . 117 1273 99.0000 . . . 0.0000 0.2137 . . . . . . . 14 . . . 0.2368 'X-RAY DIFFRACTION' 1.7800 1.8300 1477 . 138 1339 99.0000 . . . 0.0000 0.1813 . . . . . . . 14 . . . 0.2092 'X-RAY DIFFRACTION' 1.8300 1.8900 1402 . 144 1258 100.0000 . . . 0.0000 0.1710 . . . . . . . 14 . . . 0.2028 'X-RAY DIFFRACTION' 1.8900 1.9600 1454 . 141 1313 99.0000 . . . 0.0000 0.1635 . . . . . . . 14 . . . 0.1886 'X-RAY DIFFRACTION' 1.9600 2.0400 1428 . 155 1273 99.0000 . . . 0.0000 0.1526 . . . . . . . 14 . . . 0.2128 'X-RAY DIFFRACTION' 2.0400 2.1300 1435 . 128 1307 99.0000 . . . 0.0000 0.1524 . . . . . . . 14 . . . 0.2058 'X-RAY DIFFRACTION' 2.1300 2.2400 1465 . 137 1328 100.0000 . . . 0.0000 0.1543 . . . . . . . 14 . . . 0.1864 'X-RAY DIFFRACTION' 2.2400 2.3800 1425 . 136 1289 100.0000 . . . 0.0000 0.1466 . . . . . . . 14 . . . 0.1958 'X-RAY DIFFRACTION' 2.3800 2.5700 1461 . 142 1319 100.0000 . . . 0.0000 0.1523 . . . . . . . 14 . . . 0.1820 'X-RAY DIFFRACTION' 2.5700 2.8200 1442 . 141 1301 99.0000 . . . 0.0000 0.1654 . . . . . . . 14 . . . 0.1772 'X-RAY DIFFRACTION' 2.8200 3.2300 1440 . 150 1290 99.0000 . . . 0.0000 0.1562 . . . . . . . 14 . . . 0.2019 'X-RAY DIFFRACTION' 3.2300 4.0700 1460 . 147 1313 100.0000 . . . 0.0000 0.1370 . . . . . . . 14 . . . 0.1569 'X-RAY DIFFRACTION' 4.0700 52.5500 1483 . 167 1316 99.0000 . . . 0.0000 0.1408 . . . . . . . 14 . . . 0.1588 # _struct.entry_id 7U4K _struct.title 'Crystal structure of human GPX4-U46C-R152H in complex with ML162' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7U4K _struct_keywords.text 'GPX4, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 28 ? ALA A 33 ? ASP A 6 ALA A 11 5 ? 6 HELX_P HELX_P2 AA2 SER A 35 ? GLU A 38 ? SER A 13 GLU A 16 5 ? 4 HELX_P HELX_P3 AA3 ASP A 52 ? ARG A 55 ? ASP A 30 ARG A 33 5 ? 4 HELX_P HELX_P4 AA4 LYS A 70 ? ALA A 86 ? LYS A 48 ALA A 64 1 ? 17 HELX_P HELX_P5 AA5 SER A 107 ? GLY A 117 ? SER A 85 GLY A 95 1 ? 11 HELX_P HELX_P6 AA6 HIS A 136 ? ILE A 144 ? HIS A 114 ILE A 122 1 ? 9 HELX_P HELX_P7 AA7 GLU A 180 ? TYR A 191 ? GLU A 158 TYR A 169 5 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 88 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id L9C _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C16 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 66 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id L9C _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.817 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 40 ? LYS A 42 ? SER A 18 LYS A 20 AA1 2 MET A 48 ? ASN A 50 ? MET A 26 ASN A 28 AA2 1 ASP A 123 ? MET A 124 ? ASP A 101 MET A 102 AA2 2 LEU A 90 ? PRO A 96 ? LEU A 68 PRO A 74 AA2 3 VAL A 58 ? VAL A 64 ? VAL A 36 VAL A 42 AA2 4 LYS A 162 ? ILE A 165 ? LYS A 140 ILE A 143 AA2 5 VAL A 171 ? TYR A 175 ? VAL A 149 TYR A 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 41 ? N ALA A 19 O VAL A 49 ? O VAL A 27 AA2 1 2 O ASP A 123 ? O ASP A 101 N ALA A 94 ? N ALA A 72 AA2 2 3 O PHE A 95 ? O PHE A 73 N THR A 62 ? N THR A 40 AA2 3 4 N CYS A 59 ? N CYS A 37 O ILE A 165 ? O ILE A 143 AA2 4 5 N LYS A 162 ? N LYS A 140 O TYR A 175 ? O TYR A 153 # _atom_sites.entry_id 7U4K _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.012112 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002686 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014429 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031055 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 GLY 2 -20 ? ? ? A . n A 1 3 SER 3 -19 ? ? ? A . n A 1 4 SER 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 HIS 8 -14 ? ? ? A . n A 1 9 HIS 9 -13 ? ? ? A . n A 1 10 HIS 10 -12 ? ? ? A . n A 1 11 SER 11 -11 ? ? ? A . n A 1 12 SER 12 -10 ? ? ? A . n A 1 13 GLY 13 -9 ? ? ? A . n A 1 14 LEU 14 -8 ? ? ? A . n A 1 15 VAL 15 -7 ? ? ? A . n A 1 16 PRO 16 -6 ? ? ? A . n A 1 17 ARG 17 -5 ? ? ? A . n A 1 18 GLY 18 -4 ? ? ? A . n A 1 19 SER 19 -3 ? ? ? A . n A 1 20 HIS 20 -2 ? ? ? A . n A 1 21 MET 21 -1 ? ? ? A . n A 1 22 LEU 22 0 ? ? ? A . n A 1 23 GLU 23 1 ? ? ? A . n A 1 24 ALA 24 2 ? ? ? A . n A 1 25 ALA 25 3 ? ? ? A . n A 1 26 SER 26 4 ? ? ? A . n A 1 27 ARG 27 5 5 ARG ARG A . n A 1 28 ASP 28 6 6 ASP ASP A . n A 1 29 ASP 29 7 7 ASP ASP A . n A 1 30 TRP 30 8 8 TRP TRP A . n A 1 31 ARG 31 9 9 ARG ARG A . n A 1 32 CYS 32 10 10 CYS CYS A . n A 1 33 ALA 33 11 11 ALA ALA A . n A 1 34 ARG 34 12 12 ARG ARG A . n A 1 35 SER 35 13 13 SER SER A . n A 1 36 MET 36 14 14 MET MET A . n A 1 37 HIS 37 15 15 HIS HIS A . n A 1 38 GLU 38 16 16 GLU GLU A . n A 1 39 PHE 39 17 17 PHE PHE A . n A 1 40 SER 40 18 18 SER SER A . n A 1 41 ALA 41 19 19 ALA ALA A . n A 1 42 LYS 42 20 20 LYS LYS A . n A 1 43 ASP 43 21 21 ASP ASP A . n A 1 44 ILE 44 22 22 ILE ILE A . n A 1 45 ASP 45 23 23 ASP ASP A . n A 1 46 GLY 46 24 24 GLY GLY A . n A 1 47 HIS 47 25 25 HIS HIS A . n A 1 48 MET 48 26 26 MET MET A . n A 1 49 VAL 49 27 27 VAL VAL A . n A 1 50 ASN 50 28 28 ASN ASN A . n A 1 51 LEU 51 29 29 LEU LEU A . n A 1 52 ASP 52 30 30 ASP ASP A . n A 1 53 LYS 53 31 31 LYS LYS A . n A 1 54 TYR 54 32 32 TYR TYR A . n A 1 55 ARG 55 33 33 ARG ARG A . n A 1 56 GLY 56 34 34 GLY GLY A . n A 1 57 PHE 57 35 35 PHE PHE A . n A 1 58 VAL 58 36 36 VAL VAL A . n A 1 59 CYS 59 37 37 CYS CYS A . n A 1 60 ILE 60 38 38 ILE ILE A . n A 1 61 VAL 61 39 39 VAL VAL A . n A 1 62 THR 62 40 40 THR THR A . n A 1 63 ASN 63 41 41 ASN ASN A . n A 1 64 VAL 64 42 42 VAL VAL A . n A 1 65 ALA 65 43 43 ALA ALA A . n A 1 66 SER 66 44 44 SER SER A . n A 1 67 GLN 67 45 45 GLN GLN A . n A 1 68 CYS 68 46 46 CYS CYS A . n A 1 69 GLY 69 47 47 GLY GLY A . n A 1 70 LYS 70 48 48 LYS LYS A . n A 1 71 THR 71 49 49 THR THR A . n A 1 72 GLU 72 50 50 GLU GLU A . n A 1 73 VAL 73 51 51 VAL VAL A . n A 1 74 ASN 74 52 52 ASN ASN A . n A 1 75 TYR 75 53 53 TYR TYR A . n A 1 76 THR 76 54 54 THR THR A . n A 1 77 GLN 77 55 55 GLN GLN A . n A 1 78 LEU 78 56 56 LEU LEU A . n A 1 79 VAL 79 57 57 VAL VAL A . n A 1 80 ASP 80 58 58 ASP ASP A . n A 1 81 LEU 81 59 59 LEU LEU A . n A 1 82 HIS 82 60 60 HIS HIS A . n A 1 83 ALA 83 61 61 ALA ALA A . n A 1 84 ARG 84 62 62 ARG ARG A . n A 1 85 TYR 85 63 63 TYR TYR A . n A 1 86 ALA 86 64 64 ALA ALA A . n A 1 87 GLU 87 65 65 GLU GLU A . n A 1 88 CYS 88 66 66 CYS CYS A . n A 1 89 GLY 89 67 67 GLY GLY A . n A 1 90 LEU 90 68 68 LEU LEU A . n A 1 91 ARG 91 69 69 ARG ARG A . n A 1 92 ILE 92 70 70 ILE ILE A . n A 1 93 LEU 93 71 71 LEU LEU A . n A 1 94 ALA 94 72 72 ALA ALA A . n A 1 95 PHE 95 73 73 PHE PHE A . n A 1 96 PRO 96 74 74 PRO PRO A . n A 1 97 CYS 97 75 75 CYS CYS A . n A 1 98 ASN 98 76 76 ASN ASN A . n A 1 99 GLN 99 77 77 GLN GLN A . n A 1 100 PHE 100 78 78 PHE PHE A . n A 1 101 GLY 101 79 79 GLY GLY A . n A 1 102 LYS 102 80 80 LYS LYS A . n A 1 103 GLN 103 81 81 GLN GLN A . n A 1 104 GLU 104 82 82 GLU GLU A . n A 1 105 PRO 105 83 83 PRO PRO A . n A 1 106 GLY 106 84 84 GLY GLY A . n A 1 107 SER 107 85 85 SER SER A . n A 1 108 ASN 108 86 86 ASN ASN A . n A 1 109 GLU 109 87 87 GLU GLU A . n A 1 110 GLU 110 88 88 GLU GLU A . n A 1 111 ILE 111 89 89 ILE ILE A . n A 1 112 LYS 112 90 90 LYS LYS A . n A 1 113 GLU 113 91 91 GLU GLU A . n A 1 114 PHE 114 92 92 PHE PHE A . n A 1 115 ALA 115 93 93 ALA ALA A . n A 1 116 ALA 116 94 94 ALA ALA A . n A 1 117 GLY 117 95 95 GLY GLY A . n A 1 118 TYR 118 96 96 TYR TYR A . n A 1 119 ASN 119 97 97 ASN ASN A . n A 1 120 VAL 120 98 98 VAL VAL A . n A 1 121 LYS 121 99 99 LYS LYS A . n A 1 122 PHE 122 100 100 PHE PHE A . n A 1 123 ASP 123 101 101 ASP ASP A . n A 1 124 MET 124 102 102 MET MET A . n A 1 125 PHE 125 103 103 PHE PHE A . n A 1 126 SER 126 104 104 SER SER A . n A 1 127 LYS 127 105 105 LYS LYS A . n A 1 128 ILE 128 106 106 ILE ILE A . n A 1 129 CYS 129 107 107 CYS CYS A . n A 1 130 VAL 130 108 108 VAL VAL A . n A 1 131 ASN 131 109 109 ASN ASN A . n A 1 132 GLY 132 110 110 GLY GLY A . n A 1 133 ASP 133 111 111 ASP ASP A . n A 1 134 ASP 134 112 112 ASP ASP A . n A 1 135 ALA 135 113 113 ALA ALA A . n A 1 136 HIS 136 114 114 HIS HIS A . n A 1 137 PRO 137 115 115 PRO PRO A . n A 1 138 LEU 138 116 116 LEU LEU A . n A 1 139 TRP 139 117 117 TRP TRP A . n A 1 140 LYS 140 118 118 LYS LYS A . n A 1 141 TRP 141 119 119 TRP TRP A . n A 1 142 MET 142 120 120 MET MET A . n A 1 143 LYS 143 121 121 LYS LYS A . n A 1 144 ILE 144 122 122 ILE ILE A . n A 1 145 GLN 145 123 123 GLN GLN A . n A 1 146 PRO 146 124 124 PRO PRO A . n A 1 147 LYS 147 125 125 LYS LYS A . n A 1 148 GLY 148 126 126 GLY GLY A . n A 1 149 LYS 149 127 127 LYS LYS A . n A 1 150 GLY 150 128 128 GLY GLY A . n A 1 151 ILE 151 129 129 ILE ILE A . n A 1 152 LEU 152 130 130 LEU LEU A . n A 1 153 GLY 153 131 131 GLY GLY A . n A 1 154 ASN 154 132 132 ASN ASN A . n A 1 155 ALA 155 133 133 ALA ALA A . n A 1 156 ILE 156 134 134 ILE ILE A . n A 1 157 LYS 157 135 135 LYS LYS A . n A 1 158 TRP 158 136 136 TRP TRP A . n A 1 159 ASN 159 137 137 ASN ASN A . n A 1 160 PHE 160 138 138 PHE PHE A . n A 1 161 THR 161 139 139 THR THR A . n A 1 162 LYS 162 140 140 LYS LYS A . n A 1 163 PHE 163 141 141 PHE PHE A . n A 1 164 LEU 164 142 142 LEU LEU A . n A 1 165 ILE 165 143 143 ILE ILE A . n A 1 166 ASP 166 144 144 ASP ASP A . n A 1 167 LYS 167 145 145 LYS LYS A . n A 1 168 ASN 168 146 146 ASN ASN A . n A 1 169 GLY 169 147 147 GLY GLY A . n A 1 170 CYS 170 148 148 CYS CYS A . n A 1 171 VAL 171 149 149 VAL VAL A . n A 1 172 VAL 172 150 150 VAL VAL A . n A 1 173 LYS 173 151 151 LYS LYS A . n A 1 174 HIS 174 152 152 HIS HIS A . n A 1 175 TYR 175 153 153 TYR TYR A . n A 1 176 GLY 176 154 154 GLY GLY A . n A 1 177 PRO 177 155 155 PRO PRO A . n A 1 178 MET 178 156 156 MET MET A . n A 1 179 GLU 179 157 157 GLU GLU A . n A 1 180 GLU 180 158 158 GLU GLU A . n A 1 181 PRO 181 159 159 PRO PRO A . n A 1 182 LEU 182 160 160 LEU LEU A . n A 1 183 VAL 183 161 161 VAL VAL A . n A 1 184 ILE 184 162 162 ILE ILE A . n A 1 185 GLU 185 163 163 GLU GLU A . n A 1 186 LYS 186 164 164 LYS LYS A . n A 1 187 ASP 187 165 165 ASP ASP A . n A 1 188 LEU 188 166 166 LEU LEU A . n A 1 189 PRO 189 167 167 PRO PRO A . n A 1 190 HIS 190 168 168 HIS HIS A . n A 1 191 TYR 191 169 169 TYR TYR A . n A 1 192 PHE 192 170 170 PHE PHE A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email bstockwell@columbia.edu _pdbx_contact_author.name_first Brent _pdbx_contact_author.name_last Stockwell _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-3532-3868 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 L9C 1 201 201 L9C ML6 A . C 3 EDO 1 202 202 EDO EDO A . D 3 EDO 1 203 203 EDO EDO A . E 4 HOH 1 301 134 HOH HOH A . E 4 HOH 2 302 138 HOH HOH A . E 4 HOH 3 303 98 HOH HOH A . E 4 HOH 4 304 137 HOH HOH A . E 4 HOH 5 305 48 HOH HOH A . E 4 HOH 6 306 116 HOH HOH A . E 4 HOH 7 307 117 HOH HOH A . E 4 HOH 8 308 80 HOH HOH A . E 4 HOH 9 309 127 HOH HOH A . E 4 HOH 10 310 3 HOH HOH A . E 4 HOH 11 311 122 HOH HOH A . E 4 HOH 12 312 115 HOH HOH A . E 4 HOH 13 313 43 HOH HOH A . E 4 HOH 14 314 97 HOH HOH A . E 4 HOH 15 315 16 HOH HOH A . E 4 HOH 16 316 113 HOH HOH A . E 4 HOH 17 317 40 HOH HOH A . E 4 HOH 18 318 12 HOH HOH A . E 4 HOH 19 319 21 HOH HOH A . E 4 HOH 20 320 6 HOH HOH A . E 4 HOH 21 321 14 HOH HOH A . E 4 HOH 22 322 109 HOH HOH A . E 4 HOH 23 323 60 HOH HOH A . E 4 HOH 24 324 62 HOH HOH A . E 4 HOH 25 325 37 HOH HOH A . E 4 HOH 26 326 39 HOH HOH A . E 4 HOH 27 327 78 HOH HOH A . E 4 HOH 28 328 36 HOH HOH A . E 4 HOH 29 329 23 HOH HOH A . E 4 HOH 30 330 19 HOH HOH A . E 4 HOH 31 331 34 HOH HOH A . E 4 HOH 32 332 24 HOH HOH A . E 4 HOH 33 333 25 HOH HOH A . E 4 HOH 34 334 35 HOH HOH A . E 4 HOH 35 335 58 HOH HOH A . E 4 HOH 36 336 20 HOH HOH A . E 4 HOH 37 337 107 HOH HOH A . E 4 HOH 38 338 69 HOH HOH A . E 4 HOH 39 339 22 HOH HOH A . E 4 HOH 40 340 65 HOH HOH A . E 4 HOH 41 341 7 HOH HOH A . E 4 HOH 42 342 10 HOH HOH A . E 4 HOH 43 343 11 HOH HOH A . E 4 HOH 44 344 9 HOH HOH A . E 4 HOH 45 345 53 HOH HOH A . E 4 HOH 46 346 89 HOH HOH A . E 4 HOH 47 347 81 HOH HOH A . E 4 HOH 48 348 52 HOH HOH A . E 4 HOH 49 349 8 HOH HOH A . E 4 HOH 50 350 54 HOH HOH A . E 4 HOH 51 351 42 HOH HOH A . E 4 HOH 52 352 76 HOH HOH A . E 4 HOH 53 353 13 HOH HOH A . E 4 HOH 54 354 27 HOH HOH A . E 4 HOH 55 355 67 HOH HOH A . E 4 HOH 56 356 4 HOH HOH A . E 4 HOH 57 357 75 HOH HOH A . E 4 HOH 58 358 50 HOH HOH A . E 4 HOH 59 359 73 HOH HOH A . E 4 HOH 60 360 31 HOH HOH A . E 4 HOH 61 361 1 HOH HOH A . E 4 HOH 62 362 136 HOH HOH A . E 4 HOH 63 363 82 HOH HOH A . E 4 HOH 64 364 5 HOH HOH A . E 4 HOH 65 365 95 HOH HOH A . E 4 HOH 66 366 41 HOH HOH A . E 4 HOH 67 367 2 HOH HOH A . E 4 HOH 68 368 74 HOH HOH A . E 4 HOH 69 369 51 HOH HOH A . E 4 HOH 70 370 63 HOH HOH A . E 4 HOH 71 371 120 HOH HOH A . E 4 HOH 72 372 29 HOH HOH A . E 4 HOH 73 373 46 HOH HOH A . E 4 HOH 74 374 32 HOH HOH A . E 4 HOH 75 375 15 HOH HOH A . E 4 HOH 76 376 28 HOH HOH A . E 4 HOH 77 377 77 HOH HOH A . E 4 HOH 78 378 88 HOH HOH A . E 4 HOH 79 379 130 HOH HOH A . E 4 HOH 80 380 45 HOH HOH A . E 4 HOH 81 381 44 HOH HOH A . E 4 HOH 82 382 102 HOH HOH A . E 4 HOH 83 383 71 HOH HOH A . E 4 HOH 84 384 96 HOH HOH A . E 4 HOH 85 385 133 HOH HOH A . E 4 HOH 86 386 17 HOH HOH A . E 4 HOH 87 387 93 HOH HOH A . E 4 HOH 88 388 47 HOH HOH A . E 4 HOH 89 389 119 HOH HOH A . E 4 HOH 90 390 18 HOH HOH A . E 4 HOH 91 391 30 HOH HOH A . E 4 HOH 92 392 110 HOH HOH A . E 4 HOH 93 393 49 HOH HOH A . E 4 HOH 94 394 33 HOH HOH A . E 4 HOH 95 395 106 HOH HOH A . E 4 HOH 96 396 26 HOH HOH A . E 4 HOH 97 397 132 HOH HOH A . E 4 HOH 98 398 83 HOH HOH A . E 4 HOH 99 399 38 HOH HOH A . E 4 HOH 100 400 91 HOH HOH A . E 4 HOH 101 401 55 HOH HOH A . E 4 HOH 102 402 126 HOH HOH A . E 4 HOH 103 403 131 HOH HOH A . E 4 HOH 104 404 112 HOH HOH A . E 4 HOH 105 405 104 HOH HOH A . E 4 HOH 106 406 57 HOH HOH A . E 4 HOH 107 407 84 HOH HOH A . E 4 HOH 108 408 105 HOH HOH A . E 4 HOH 109 409 64 HOH HOH A . E 4 HOH 110 410 86 HOH HOH A . E 4 HOH 111 411 129 HOH HOH A . E 4 HOH 112 412 101 HOH HOH A . E 4 HOH 113 413 103 HOH HOH A . E 4 HOH 114 414 135 HOH HOH A . E 4 HOH 115 415 61 HOH HOH A . E 4 HOH 116 416 125 HOH HOH A . E 4 HOH 117 417 124 HOH HOH A . E 4 HOH 118 418 59 HOH HOH A . E 4 HOH 119 419 121 HOH HOH A . E 4 HOH 120 420 92 HOH HOH A . E 4 HOH 121 421 118 HOH HOH A . E 4 HOH 122 422 94 HOH HOH A . E 4 HOH 123 423 85 HOH HOH A . E 4 HOH 124 424 111 HOH HOH A . E 4 HOH 125 425 99 HOH HOH A . E 4 HOH 126 426 108 HOH HOH A . E 4 HOH 127 427 114 HOH HOH A . E 4 HOH 128 428 66 HOH HOH A . E 4 HOH 129 429 79 HOH HOH A . E 4 HOH 130 430 123 HOH HOH A . E 4 HOH 131 431 100 HOH HOH A . E 4 HOH 132 432 72 HOH HOH A . E 4 HOH 133 433 70 HOH HOH A . E 4 HOH 134 434 56 HOH HOH A . E 4 HOH 135 435 87 HOH HOH A . E 4 HOH 136 436 90 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-12-07 2 'Structure model' 1 1 2022-12-14 3 'Structure model' 1 2 2022-12-28 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 16.2804 _pdbx_refine_tls.origin_y -0.5052 _pdbx_refine_tls.origin_z 7.8531 _pdbx_refine_tls.T[1][1] 0.1965 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0054 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0087 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.2113 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0091 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.2096 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.0654 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.3336 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.1171 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.3478 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.3387 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.8439 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0468 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0192 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0031 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0357 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0694 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0059 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0152 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0312 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0000 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 5 ? ? ? A 170 ? ? all 2 'X-RAY DIFFRACTION' 1 ? ? A 201 ? ? ? A 203 ? ? all 3 'X-RAY DIFFRACTION' 1 ? ? S 1 ? ? ? S 138 ? ? all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _pdbx_entry_details.entry_id 7U4K _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 65 ? ? O A HOH 301 ? ? 2.17 2 1 O A HOH 370 ? ? O A HOH 402 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 355 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 376 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_546 _pdbx_validate_symm_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 125 ? ? 33.12 -112.06 2 1 LYS A 127 ? ? -83.52 -72.80 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A GLY -20 ? A GLY 2 3 1 Y 1 A SER -19 ? A SER 3 4 1 Y 1 A SER -18 ? A SER 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A HIS -14 ? A HIS 8 9 1 Y 1 A HIS -13 ? A HIS 9 10 1 Y 1 A HIS -12 ? A HIS 10 11 1 Y 1 A SER -11 ? A SER 11 12 1 Y 1 A SER -10 ? A SER 12 13 1 Y 1 A GLY -9 ? A GLY 13 14 1 Y 1 A LEU -8 ? A LEU 14 15 1 Y 1 A VAL -7 ? A VAL 15 16 1 Y 1 A PRO -6 ? A PRO 16 17 1 Y 1 A ARG -5 ? A ARG 17 18 1 Y 1 A GLY -4 ? A GLY 18 19 1 Y 1 A SER -3 ? A SER 19 20 1 Y 1 A HIS -2 ? A HIS 20 21 1 Y 1 A MET -1 ? A MET 21 22 1 Y 1 A LEU 0 ? A LEU 22 23 1 Y 1 A GLU 1 ? A GLU 23 24 1 Y 1 A ALA 2 ? A ALA 24 25 1 Y 1 A ALA 3 ? A ALA 25 26 1 Y 1 A SER 4 ? A SER 26 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 L9C C10 C N R 193 L9C C11 C Y N 194 L9C C13 C Y N 195 L9C C14 C Y N 196 L9C C15 C N N 197 L9C C21 C Y N 198 L9C C22 C Y N 199 L9C C23 C N N 200 L9C C1 C Y N 201 L9C C12 C Y N 202 L9C C16 C N N 203 L9C C17 C Y N 204 L9C C18 C Y N 205 L9C C19 C Y N 206 L9C C2 C Y N 207 L9C C20 C Y N 208 L9C C3 C Y N 209 L9C C4 C Y N 210 L9C C5 C Y N 211 L9C C6 C Y N 212 L9C C7 C N N 213 L9C C8 C N N 214 L9C C9 C N N 215 L9C CL2 CL N N 216 L9C N1 N N N 217 L9C N2 N N N 218 L9C O1 O N N 219 L9C O2 O N N 220 L9C O3 O N N 221 L9C S1 S Y N 222 L9C CL1 CL N N 223 L9C H1 H N N 224 L9C H2 H N N 225 L9C H3 H N N 226 L9C H4 H N N 227 L9C H5 H N N 228 L9C H6 H N N 229 L9C H7 H N N 230 L9C H8 H N N 231 L9C H9 H N N 232 L9C H10 H N N 233 L9C H11 H N N 234 L9C H12 H N N 235 L9C H13 H N N 236 L9C H14 H N N 237 L9C H15 H N N 238 L9C H16 H N N 239 L9C H17 H N N 240 L9C H18 H N N 241 L9C H19 H N N 242 L9C H20 H N N 243 L9C H21 H N N 244 L9C H22 H N N 245 LEU N N N N 246 LEU CA C N S 247 LEU C C N N 248 LEU O O N N 249 LEU CB C N N 250 LEU CG C N N 251 LEU CD1 C N N 252 LEU CD2 C N N 253 LEU OXT O N N 254 LEU H H N N 255 LEU H2 H N N 256 LEU HA H N N 257 LEU HB2 H N N 258 LEU HB3 H N N 259 LEU HG H N N 260 LEU HD11 H N N 261 LEU HD12 H N N 262 LEU HD13 H N N 263 LEU HD21 H N N 264 LEU HD22 H N N 265 LEU HD23 H N N 266 LEU HXT H N N 267 LYS N N N N 268 LYS CA C N S 269 LYS C C N N 270 LYS O O N N 271 LYS CB C N N 272 LYS CG C N N 273 LYS CD C N N 274 LYS CE C N N 275 LYS NZ N N N 276 LYS OXT O N N 277 LYS H H N N 278 LYS H2 H N N 279 LYS HA H N N 280 LYS HB2 H N N 281 LYS HB3 H N N 282 LYS HG2 H N N 283 LYS HG3 H N N 284 LYS HD2 H N N 285 LYS HD3 H N N 286 LYS HE2 H N N 287 LYS HE3 H N N 288 LYS HZ1 H N N 289 LYS HZ2 H N N 290 LYS HZ3 H N N 291 LYS HXT H N N 292 MET N N N N 293 MET CA C N S 294 MET C C N N 295 MET O O N N 296 MET CB C N N 297 MET CG C N N 298 MET SD S N N 299 MET CE C N N 300 MET OXT O N N 301 MET H H N N 302 MET H2 H N N 303 MET HA H N N 304 MET HB2 H N N 305 MET HB3 H N N 306 MET HG2 H N N 307 MET HG3 H N N 308 MET HE1 H N N 309 MET HE2 H N N 310 MET HE3 H N N 311 MET HXT H N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SEC N N N N 353 SEC CA C N R 354 SEC CB C N N 355 SEC SE SE N N 356 SEC C C N N 357 SEC O O N N 358 SEC OXT O N N 359 SEC H H N N 360 SEC H2 H N N 361 SEC HA H N N 362 SEC HB2 H N N 363 SEC HB3 H N N 364 SEC HE H N N 365 SEC HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 THR N N N N 381 THR CA C N S 382 THR C C N N 383 THR O O N N 384 THR CB C N R 385 THR OG1 O N N 386 THR CG2 C N N 387 THR OXT O N N 388 THR H H N N 389 THR H2 H N N 390 THR HA H N N 391 THR HB H N N 392 THR HG1 H N N 393 THR HG21 H N N 394 THR HG22 H N N 395 THR HG23 H N N 396 THR HXT H N N 397 TRP N N N N 398 TRP CA C N S 399 TRP C C N N 400 TRP O O N N 401 TRP CB C N N 402 TRP CG C Y N 403 TRP CD1 C Y N 404 TRP CD2 C Y N 405 TRP NE1 N Y N 406 TRP CE2 C Y N 407 TRP CE3 C Y N 408 TRP CZ2 C Y N 409 TRP CZ3 C Y N 410 TRP CH2 C Y N 411 TRP OXT O N N 412 TRP H H N N 413 TRP H2 H N N 414 TRP HA H N N 415 TRP HB2 H N N 416 TRP HB3 H N N 417 TRP HD1 H N N 418 TRP HE1 H N N 419 TRP HE3 H N N 420 TRP HZ2 H N N 421 TRP HZ3 H N N 422 TRP HH2 H N N 423 TRP HXT H N N 424 TYR N N N N 425 TYR CA C N S 426 TYR C C N N 427 TYR O O N N 428 TYR CB C N N 429 TYR CG C Y N 430 TYR CD1 C Y N 431 TYR CD2 C Y N 432 TYR CE1 C Y N 433 TYR CE2 C Y N 434 TYR CZ C Y N 435 TYR OH O N N 436 TYR OXT O N N 437 TYR H H N N 438 TYR H2 H N N 439 TYR HA H N N 440 TYR HB2 H N N 441 TYR HB3 H N N 442 TYR HD1 H N N 443 TYR HD2 H N N 444 TYR HE1 H N N 445 TYR HE2 H N N 446 TYR HH H N N 447 TYR HXT H N N 448 VAL N N N N 449 VAL CA C N S 450 VAL C C N N 451 VAL O O N N 452 VAL CB C N N 453 VAL CG1 C N N 454 VAL CG2 C N N 455 VAL OXT O N N 456 VAL H H N N 457 VAL H2 H N N 458 VAL HA H N N 459 VAL HB H N N 460 VAL HG11 H N N 461 VAL HG12 H N N 462 VAL HG13 H N N 463 VAL HG21 H N N 464 VAL HG22 H N N 465 VAL HG23 H N N 466 VAL HXT H N N 467 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 L9C CL2 C18 sing N N 182 L9C C13 C12 doub Y N 183 L9C C13 C14 sing Y N 184 L9C C12 S1 sing Y N 185 L9C O3 C23 sing N N 186 L9C O3 C17 sing N N 187 L9C C18 C17 doub Y N 188 L9C C18 C19 sing Y N 189 L9C C14 C11 doub Y N 190 L9C C17 C22 sing Y N 191 L9C C19 C20 doub Y N 192 L9C S1 C11 sing Y N 193 L9C C11 C10 sing N N 194 L9C C22 C21 doub Y N 195 L9C C20 N2 sing N N 196 L9C C20 C21 sing Y N 197 L9C N2 C10 sing N N 198 L9C N2 C15 sing N N 199 L9C C10 C9 sing N N 200 L9C O2 C15 doub N N 201 L9C C15 C16 sing N N 202 L9C C9 N1 sing N N 203 L9C C9 O1 doub N N 204 L9C N1 C8 sing N N 205 L9C C8 C7 sing N N 206 L9C C7 C2 sing N N 207 L9C C2 C1 doub Y N 208 L9C C2 C3 sing Y N 209 L9C C1 C6 sing Y N 210 L9C C3 C4 doub Y N 211 L9C C6 C5 doub Y N 212 L9C C4 C5 sing Y N 213 L9C C16 CL1 sing N N 214 L9C C10 H1 sing N N 215 L9C C13 H2 sing N N 216 L9C C14 H3 sing N N 217 L9C C21 H4 sing N N 218 L9C C22 H5 sing N N 219 L9C C23 H6 sing N N 220 L9C C23 H7 sing N N 221 L9C C23 H8 sing N N 222 L9C C1 H9 sing N N 223 L9C C12 H10 sing N N 224 L9C C16 H11 sing N N 225 L9C C16 H12 sing N N 226 L9C C19 H13 sing N N 227 L9C C3 H14 sing N N 228 L9C C4 H15 sing N N 229 L9C C5 H16 sing N N 230 L9C C6 H17 sing N N 231 L9C C7 H18 sing N N 232 L9C C7 H19 sing N N 233 L9C C8 H20 sing N N 234 L9C C8 H21 sing N N 235 L9C N1 H22 sing N N 236 LEU N CA sing N N 237 LEU N H sing N N 238 LEU N H2 sing N N 239 LEU CA C sing N N 240 LEU CA CB sing N N 241 LEU CA HA sing N N 242 LEU C O doub N N 243 LEU C OXT sing N N 244 LEU CB CG sing N N 245 LEU CB HB2 sing N N 246 LEU CB HB3 sing N N 247 LEU CG CD1 sing N N 248 LEU CG CD2 sing N N 249 LEU CG HG sing N N 250 LEU CD1 HD11 sing N N 251 LEU CD1 HD12 sing N N 252 LEU CD1 HD13 sing N N 253 LEU CD2 HD21 sing N N 254 LEU CD2 HD22 sing N N 255 LEU CD2 HD23 sing N N 256 LEU OXT HXT sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 MET N CA sing N N 282 MET N H sing N N 283 MET N H2 sing N N 284 MET CA C sing N N 285 MET CA CB sing N N 286 MET CA HA sing N N 287 MET C O doub N N 288 MET C OXT sing N N 289 MET CB CG sing N N 290 MET CB HB2 sing N N 291 MET CB HB3 sing N N 292 MET CG SD sing N N 293 MET CG HG2 sing N N 294 MET CG HG3 sing N N 295 MET SD CE sing N N 296 MET CE HE1 sing N N 297 MET CE HE2 sing N N 298 MET CE HE3 sing N N 299 MET OXT HXT sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SEC N CA sing N N 341 SEC N H sing N N 342 SEC N H2 sing N N 343 SEC CA CB sing N N 344 SEC CA C sing N N 345 SEC CA HA sing N N 346 SEC CB SE sing N N 347 SEC CB HB2 sing N N 348 SEC CB HB3 sing N N 349 SEC SE HE sing N N 350 SEC C O doub N N 351 SEC C OXT sing N N 352 SEC OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' P01CA87497 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R24GM141256 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM124165 3 'Department of Health & Human Services (HHS)' 'United States' OD021527 4 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 5 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' R35CA209896 6 'National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS)' 'United States' R61NS109407 7 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-chloro-N-(3-chloro-4-methoxyphenyl)-N-[(1R)-2-oxo-2-[(2-phenylethyl)amino]-1-(thiophen-2-yl)ethyl]acetamide' L9C 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 7L8K ? 2 ? 'experimental model' PDB 7L8L ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'crystal packing' #