data_7UDY # _entry.id 7UDY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7UDY pdb_00007udy 10.2210/pdb7udy/pdb WWPDB D_1000264015 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7UDY _pdbx_database_status.recvd_initial_deposition_date 2022-03-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kratochvil, H.T.' 1 0000-0001-8039-6823 'Thomaston, J.L.' 2 ? 'Liu, L.' 3 ? 'DeGrado, W.F.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1755-4349 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 1012 _citation.page_last 1021 _citation.title 'Transient water wires mediate selective proton transport in designed channel proteins.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41557-023-01210-4 _citation.pdbx_database_id_PubMed 37308712 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kratochvil, H.T.' 1 ? primary 'Watkins, L.C.' 2 ? primary 'Mravic, M.' 3 ? primary 'Thomaston, J.L.' 4 ? primary 'Nicoludis, J.M.' 5 ? primary 'Somberg, N.H.' 6 ? primary 'Liu, L.' 7 ? primary 'Hong, M.' 8 ? primary 'Voth, G.A.' 9 ? primary 'DeGrado, W.F.' 10 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7UDY _cell.details ? _cell.formula_units_Z ? _cell.length_a 56.385 _cell.length_a_esd ? _cell.length_b 84.837 _cell.length_b_esd ? _cell.length_c 149.557 _cell.length_c_esd ? _cell.volume 715411.025 _cell.volume_esd ? _cell.Z_PDB 120 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UDY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Designed channel QLLL' 3045.830 15 ? ? ? ? 2 non-polymer syn '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' 306.438 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code DSQKWIVFLLFLIVLLLLAIVFLLRG _entity_poly.pdbx_seq_one_letter_code_can DSQKWIVFLLFLIVLLLLAIVFLLRG _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 SER n 1 3 GLN n 1 4 LYS n 1 5 TRP n 1 6 ILE n 1 7 VAL n 1 8 PHE n 1 9 LEU n 1 10 LEU n 1 11 PHE n 1 12 LEU n 1 13 ILE n 1 14 VAL n 1 15 LEU n 1 16 LEU n 1 17 LEU n 1 18 LEU n 1 19 ALA n 1 20 ILE n 1 21 VAL n 1 22 PHE n 1 23 LEU n 1 24 LEU n 1 25 ARG n 1 26 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 26 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7UDY _struct_ref.pdbx_db_accession 7UDY _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7UDY A 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 2 1 7UDY B 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 3 1 7UDY C 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 4 1 7UDY D 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 5 1 7UDY E 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 6 1 7UDY F 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 7 1 7UDY G 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 8 1 7UDY H 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 9 1 7UDY I 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 10 1 7UDY J 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 11 1 7UDY K 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 12 1 7UDY L 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 13 1 7UDY M 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 14 1 7UDY N 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 15 1 7UDY O 1 ? 26 ? 7UDY 1 ? 26 ? 1 26 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C8E non-polymer . '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' ? 'C16 H34 O5' 306.438 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7UDY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.22 M sodium citrate, 0.1 M Tris, pH 8.0, 35% v/v PEG400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-03-12 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03318 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.03318 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 46.53 _reflns.entry_id 7UDY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 74.78 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14395 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.5 _reflns.pdbx_Rmerge_I_obs 0.155 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.53 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2034 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.249 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.831 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 67.45 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7UDY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.40 _refine.ls_d_res_low 39.77 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14307 _refine.ls_number_reflns_R_free 688 _refine.ls_number_reflns_R_work 13619 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.29 _refine.ls_percent_reflns_R_free 4.81 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2307 _refine.ls_R_factor_R_free 0.2507 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2297 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 6MCT' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 33.4173 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3235 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 39.77 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3107 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3044 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0013 ? 3228 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.3241 ? 4400 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0295 ? 610 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0015 ? 461 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 10.2371 ? 1073 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.40 2.59 . . 146 2640 98.62 . . . 0.3471 . 0.2892 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.59 2.85 . . 142 2702 99.61 . . . 0.3200 . 0.2629 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.85 3.26 . . 136 2709 99.75 . . . 0.2669 . 0.2507 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.26 4.10 . . 135 2727 99.65 . . . 0.2503 . 0.2247 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.10 39.77 . . 129 2841 98.84 . . . 0.2133 . 0.2090 . . . . . . . . . . . # _struct.entry_id 7UDY _struct.title 'Designed pentameric channel QLLL' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7UDY _struct_keywords.text 'Proton transport, de novo designed, pentameric, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 2 ? Q N N 2 ? R N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 2 ? ARG A 25 ? SER A 2 ARG A 25 1 ? 24 HELX_P HELX_P2 AA2 SER B 2 ? GLY B 26 ? SER B 2 GLY B 26 1 ? 25 HELX_P HELX_P3 AA3 SER C 2 ? ARG C 25 ? SER C 2 ARG C 25 1 ? 24 HELX_P HELX_P4 AA4 SER D 2 ? GLY D 26 ? SER D 2 GLY D 26 1 ? 25 HELX_P HELX_P5 AA5 SER E 2 ? ARG E 25 ? SER E 2 ARG E 25 1 ? 24 HELX_P HELX_P6 AA6 SER F 2 ? ARG F 25 ? SER F 2 ARG F 25 1 ? 24 HELX_P HELX_P7 AA7 SER G 2 ? ARG G 25 ? SER G 2 ARG G 25 1 ? 24 HELX_P HELX_P8 AA8 SER H 2 ? ARG H 25 ? SER H 2 ARG H 25 1 ? 24 HELX_P HELX_P9 AA9 SER I 2 ? ARG I 25 ? SER I 2 ARG I 25 1 ? 24 HELX_P HELX_P10 AB1 SER J 2 ? ARG J 25 ? SER J 2 ARG J 25 1 ? 24 HELX_P HELX_P11 AB2 SER K 2 ? ARG K 25 ? SER K 2 ARG K 25 1 ? 24 HELX_P HELX_P12 AB3 SER L 2 ? GLY L 26 ? SER L 2 GLY L 26 1 ? 25 HELX_P HELX_P13 AB4 SER M 2 ? ARG M 25 ? SER M 2 ARG M 25 1 ? 24 HELX_P HELX_P14 AB5 SER N 2 ? GLY N 26 ? SER N 2 GLY N 26 1 ? 25 HELX_P HELX_P15 AB6 SER O 2 ? ARG O 25 ? SER O 2 ARG O 25 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 7UDY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017735 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011787 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006686 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLY 26 26 ? ? ? A . n B 1 1 ASP 1 1 1 ASP ASP B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 GLN 3 3 3 GLN GLN B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 TRP 5 5 5 TRP TRP B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 VAL 7 7 7 VAL VAL B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 PHE 11 11 11 PHE PHE B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 ILE 20 20 20 ILE ILE B . n B 1 21 VAL 21 21 21 VAL VAL B . n B 1 22 PHE 22 22 22 PHE PHE B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 GLY 26 26 26 GLY GLY B . n C 1 1 ASP 1 1 1 ASP ASP C . n C 1 2 SER 2 2 2 SER SER C . n C 1 3 GLN 3 3 3 GLN GLN C . n C 1 4 LYS 4 4 4 LYS LYS C . n C 1 5 TRP 5 5 5 TRP TRP C . n C 1 6 ILE 6 6 6 ILE ILE C . n C 1 7 VAL 7 7 7 VAL VAL C . n C 1 8 PHE 8 8 8 PHE PHE C . n C 1 9 LEU 9 9 9 LEU LEU C . n C 1 10 LEU 10 10 10 LEU LEU C . n C 1 11 PHE 11 11 11 PHE PHE C . n C 1 12 LEU 12 12 12 LEU LEU C . n C 1 13 ILE 13 13 13 ILE ILE C . n C 1 14 VAL 14 14 14 VAL VAL C . n C 1 15 LEU 15 15 15 LEU LEU C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 LEU 17 17 17 LEU LEU C . n C 1 18 LEU 18 18 18 LEU LEU C . n C 1 19 ALA 19 19 19 ALA ALA C . n C 1 20 ILE 20 20 20 ILE ILE C . n C 1 21 VAL 21 21 21 VAL VAL C . n C 1 22 PHE 22 22 22 PHE PHE C . n C 1 23 LEU 23 23 23 LEU LEU C . n C 1 24 LEU 24 24 24 LEU LEU C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 GLY 26 26 ? ? ? C . n D 1 1 ASP 1 1 1 ASP ASP D . n D 1 2 SER 2 2 2 SER SER D . n D 1 3 GLN 3 3 3 GLN GLN D . n D 1 4 LYS 4 4 4 LYS LYS D . n D 1 5 TRP 5 5 5 TRP TRP D . n D 1 6 ILE 6 6 6 ILE ILE D . n D 1 7 VAL 7 7 7 VAL VAL D . n D 1 8 PHE 8 8 8 PHE PHE D . n D 1 9 LEU 9 9 9 LEU LEU D . n D 1 10 LEU 10 10 10 LEU LEU D . n D 1 11 PHE 11 11 11 PHE PHE D . n D 1 12 LEU 12 12 12 LEU LEU D . n D 1 13 ILE 13 13 13 ILE ILE D . n D 1 14 VAL 14 14 14 VAL VAL D . n D 1 15 LEU 15 15 15 LEU LEU D . n D 1 16 LEU 16 16 16 LEU LEU D . n D 1 17 LEU 17 17 17 LEU LEU D . n D 1 18 LEU 18 18 18 LEU LEU D . n D 1 19 ALA 19 19 19 ALA ALA D . n D 1 20 ILE 20 20 20 ILE ILE D . n D 1 21 VAL 21 21 21 VAL VAL D . n D 1 22 PHE 22 22 22 PHE PHE D . n D 1 23 LEU 23 23 23 LEU LEU D . n D 1 24 LEU 24 24 24 LEU LEU D . n D 1 25 ARG 25 25 25 ARG ARG D . n D 1 26 GLY 26 26 26 GLY GLY D . n E 1 1 ASP 1 1 1 ASP ASP E . n E 1 2 SER 2 2 2 SER SER E . n E 1 3 GLN 3 3 3 GLN GLN E . n E 1 4 LYS 4 4 4 LYS LYS E . n E 1 5 TRP 5 5 5 TRP TRP E . n E 1 6 ILE 6 6 6 ILE ILE E . n E 1 7 VAL 7 7 7 VAL VAL E . n E 1 8 PHE 8 8 8 PHE PHE E . n E 1 9 LEU 9 9 9 LEU LEU E . n E 1 10 LEU 10 10 10 LEU LEU E . n E 1 11 PHE 11 11 11 PHE PHE E . n E 1 12 LEU 12 12 12 LEU LEU E . n E 1 13 ILE 13 13 13 ILE ILE E . n E 1 14 VAL 14 14 14 VAL VAL E . n E 1 15 LEU 15 15 15 LEU LEU E . n E 1 16 LEU 16 16 16 LEU LEU E . n E 1 17 LEU 17 17 17 LEU LEU E . n E 1 18 LEU 18 18 18 LEU LEU E . n E 1 19 ALA 19 19 19 ALA ALA E . n E 1 20 ILE 20 20 20 ILE ILE E . n E 1 21 VAL 21 21 21 VAL VAL E . n E 1 22 PHE 22 22 22 PHE PHE E . n E 1 23 LEU 23 23 23 LEU LEU E . n E 1 24 LEU 24 24 24 LEU LEU E . n E 1 25 ARG 25 25 25 ARG ARG E . n E 1 26 GLY 26 26 ? ? ? E . n F 1 1 ASP 1 1 1 ASP ASP F . n F 1 2 SER 2 2 2 SER SER F . n F 1 3 GLN 3 3 3 GLN GLN F . n F 1 4 LYS 4 4 4 LYS LYS F . n F 1 5 TRP 5 5 5 TRP TRP F . n F 1 6 ILE 6 6 6 ILE ILE F . n F 1 7 VAL 7 7 7 VAL VAL F . n F 1 8 PHE 8 8 8 PHE PHE F . n F 1 9 LEU 9 9 9 LEU LEU F . n F 1 10 LEU 10 10 10 LEU LEU F . n F 1 11 PHE 11 11 11 PHE PHE F . n F 1 12 LEU 12 12 12 LEU LEU F . n F 1 13 ILE 13 13 13 ILE ILE F . n F 1 14 VAL 14 14 14 VAL VAL F . n F 1 15 LEU 15 15 15 LEU LEU F . n F 1 16 LEU 16 16 16 LEU LEU F . n F 1 17 LEU 17 17 17 LEU LEU F . n F 1 18 LEU 18 18 18 LEU LEU F . n F 1 19 ALA 19 19 19 ALA ALA F . n F 1 20 ILE 20 20 20 ILE ILE F . n F 1 21 VAL 21 21 21 VAL VAL F . n F 1 22 PHE 22 22 22 PHE PHE F . n F 1 23 LEU 23 23 23 LEU LEU F . n F 1 24 LEU 24 24 24 LEU LEU F . n F 1 25 ARG 25 25 25 ARG ARG F . n F 1 26 GLY 26 26 ? ? ? F . n G 1 1 ASP 1 1 1 ASP ASP G . n G 1 2 SER 2 2 2 SER SER G . n G 1 3 GLN 3 3 3 GLN GLN G . n G 1 4 LYS 4 4 4 LYS LYS G . n G 1 5 TRP 5 5 5 TRP TRP G . n G 1 6 ILE 6 6 6 ILE ILE G . n G 1 7 VAL 7 7 7 VAL VAL G . n G 1 8 PHE 8 8 8 PHE PHE G . n G 1 9 LEU 9 9 9 LEU LEU G . n G 1 10 LEU 10 10 10 LEU LEU G . n G 1 11 PHE 11 11 11 PHE PHE G . n G 1 12 LEU 12 12 12 LEU LEU G . n G 1 13 ILE 13 13 13 ILE ILE G . n G 1 14 VAL 14 14 14 VAL VAL G . n G 1 15 LEU 15 15 15 LEU LEU G . n G 1 16 LEU 16 16 16 LEU LEU G . n G 1 17 LEU 17 17 17 LEU LEU G . n G 1 18 LEU 18 18 18 LEU LEU G . n G 1 19 ALA 19 19 19 ALA ALA G . n G 1 20 ILE 20 20 20 ILE ILE G . n G 1 21 VAL 21 21 21 VAL VAL G . n G 1 22 PHE 22 22 22 PHE PHE G . n G 1 23 LEU 23 23 23 LEU LEU G . n G 1 24 LEU 24 24 24 LEU LEU G . n G 1 25 ARG 25 25 25 ARG ARG G . n G 1 26 GLY 26 26 ? ? ? G . n H 1 1 ASP 1 1 1 ASP ASP H . n H 1 2 SER 2 2 2 SER SER H . n H 1 3 GLN 3 3 3 GLN GLN H . n H 1 4 LYS 4 4 4 LYS LYS H . n H 1 5 TRP 5 5 5 TRP TRP H . n H 1 6 ILE 6 6 6 ILE ILE H . n H 1 7 VAL 7 7 7 VAL VAL H . n H 1 8 PHE 8 8 8 PHE PHE H . n H 1 9 LEU 9 9 9 LEU LEU H . n H 1 10 LEU 10 10 10 LEU LEU H . n H 1 11 PHE 11 11 11 PHE PHE H . n H 1 12 LEU 12 12 12 LEU LEU H . n H 1 13 ILE 13 13 13 ILE ILE H . n H 1 14 VAL 14 14 14 VAL VAL H . n H 1 15 LEU 15 15 15 LEU LEU H . n H 1 16 LEU 16 16 16 LEU LEU H . n H 1 17 LEU 17 17 17 LEU LEU H . n H 1 18 LEU 18 18 18 LEU LEU H . n H 1 19 ALA 19 19 19 ALA ALA H . n H 1 20 ILE 20 20 20 ILE ILE H . n H 1 21 VAL 21 21 21 VAL VAL H . n H 1 22 PHE 22 22 22 PHE PHE H . n H 1 23 LEU 23 23 23 LEU LEU H . n H 1 24 LEU 24 24 24 LEU LEU H . n H 1 25 ARG 25 25 25 ARG ARG H . n H 1 26 GLY 26 26 ? ? ? H . n I 1 1 ASP 1 1 1 ASP ASP I . n I 1 2 SER 2 2 2 SER SER I . n I 1 3 GLN 3 3 3 GLN GLN I . n I 1 4 LYS 4 4 4 LYS LYS I . n I 1 5 TRP 5 5 5 TRP TRP I . n I 1 6 ILE 6 6 6 ILE ILE I . n I 1 7 VAL 7 7 7 VAL VAL I . n I 1 8 PHE 8 8 8 PHE PHE I . n I 1 9 LEU 9 9 9 LEU LEU I . n I 1 10 LEU 10 10 10 LEU LEU I . n I 1 11 PHE 11 11 11 PHE PHE I . n I 1 12 LEU 12 12 12 LEU LEU I . n I 1 13 ILE 13 13 13 ILE ILE I . n I 1 14 VAL 14 14 14 VAL VAL I . n I 1 15 LEU 15 15 15 LEU LEU I . n I 1 16 LEU 16 16 16 LEU LEU I . n I 1 17 LEU 17 17 17 LEU LEU I . n I 1 18 LEU 18 18 18 LEU LEU I . n I 1 19 ALA 19 19 19 ALA ALA I . n I 1 20 ILE 20 20 20 ILE ILE I . n I 1 21 VAL 21 21 21 VAL VAL I . n I 1 22 PHE 22 22 22 PHE PHE I . n I 1 23 LEU 23 23 23 LEU LEU I . n I 1 24 LEU 24 24 24 LEU LEU I . n I 1 25 ARG 25 25 25 ARG ARG I . n I 1 26 GLY 26 26 ? ? ? I . n J 1 1 ASP 1 1 1 ASP ASP J . n J 1 2 SER 2 2 2 SER SER J . n J 1 3 GLN 3 3 3 GLN GLN J . n J 1 4 LYS 4 4 4 LYS LYS J . n J 1 5 TRP 5 5 5 TRP TRP J . n J 1 6 ILE 6 6 6 ILE ILE J . n J 1 7 VAL 7 7 7 VAL VAL J . n J 1 8 PHE 8 8 8 PHE PHE J . n J 1 9 LEU 9 9 9 LEU LEU J . n J 1 10 LEU 10 10 10 LEU LEU J . n J 1 11 PHE 11 11 11 PHE PHE J . n J 1 12 LEU 12 12 12 LEU LEU J . n J 1 13 ILE 13 13 13 ILE ILE J . n J 1 14 VAL 14 14 14 VAL VAL J . n J 1 15 LEU 15 15 15 LEU LEU J . n J 1 16 LEU 16 16 16 LEU LEU J . n J 1 17 LEU 17 17 17 LEU LEU J . n J 1 18 LEU 18 18 18 LEU LEU J . n J 1 19 ALA 19 19 19 ALA ALA J . n J 1 20 ILE 20 20 20 ILE ILE J . n J 1 21 VAL 21 21 21 VAL VAL J . n J 1 22 PHE 22 22 22 PHE PHE J . n J 1 23 LEU 23 23 23 LEU LEU J . n J 1 24 LEU 24 24 24 LEU LEU J . n J 1 25 ARG 25 25 25 ARG ARG J . n J 1 26 GLY 26 26 ? ? ? J . n K 1 1 ASP 1 1 1 ASP ASP K . n K 1 2 SER 2 2 2 SER SER K . n K 1 3 GLN 3 3 3 GLN GLN K . n K 1 4 LYS 4 4 4 LYS LYS K . n K 1 5 TRP 5 5 5 TRP TRP K . n K 1 6 ILE 6 6 6 ILE ILE K . n K 1 7 VAL 7 7 7 VAL VAL K . n K 1 8 PHE 8 8 8 PHE PHE K . n K 1 9 LEU 9 9 9 LEU LEU K . n K 1 10 LEU 10 10 10 LEU LEU K . n K 1 11 PHE 11 11 11 PHE PHE K . n K 1 12 LEU 12 12 12 LEU LEU K . n K 1 13 ILE 13 13 13 ILE ILE K . n K 1 14 VAL 14 14 14 VAL VAL K . n K 1 15 LEU 15 15 15 LEU LEU K . n K 1 16 LEU 16 16 16 LEU LEU K . n K 1 17 LEU 17 17 17 LEU LEU K . n K 1 18 LEU 18 18 18 LEU LEU K . n K 1 19 ALA 19 19 19 ALA ALA K . n K 1 20 ILE 20 20 20 ILE ILE K . n K 1 21 VAL 21 21 21 VAL VAL K . n K 1 22 PHE 22 22 22 PHE PHE K . n K 1 23 LEU 23 23 23 LEU LEU K . n K 1 24 LEU 24 24 24 LEU LEU K . n K 1 25 ARG 25 25 25 ARG ARG K . n K 1 26 GLY 26 26 ? ? ? K . n L 1 1 ASP 1 1 1 ASP ASP L . n L 1 2 SER 2 2 2 SER SER L . n L 1 3 GLN 3 3 3 GLN GLN L . n L 1 4 LYS 4 4 4 LYS LYS L . n L 1 5 TRP 5 5 5 TRP TRP L . n L 1 6 ILE 6 6 6 ILE ILE L . n L 1 7 VAL 7 7 7 VAL VAL L . n L 1 8 PHE 8 8 8 PHE PHE L . n L 1 9 LEU 9 9 9 LEU LEU L . n L 1 10 LEU 10 10 10 LEU LEU L . n L 1 11 PHE 11 11 11 PHE PHE L . n L 1 12 LEU 12 12 12 LEU LEU L . n L 1 13 ILE 13 13 13 ILE ILE L . n L 1 14 VAL 14 14 14 VAL VAL L . n L 1 15 LEU 15 15 15 LEU LEU L . n L 1 16 LEU 16 16 16 LEU LEU L . n L 1 17 LEU 17 17 17 LEU LEU L . n L 1 18 LEU 18 18 18 LEU LEU L . n L 1 19 ALA 19 19 19 ALA ALA L . n L 1 20 ILE 20 20 20 ILE ILE L . n L 1 21 VAL 21 21 21 VAL VAL L . n L 1 22 PHE 22 22 22 PHE PHE L . n L 1 23 LEU 23 23 23 LEU LEU L . n L 1 24 LEU 24 24 24 LEU LEU L . n L 1 25 ARG 25 25 25 ARG ARG L . n L 1 26 GLY 26 26 26 GLY GLY L . n M 1 1 ASP 1 1 1 ASP ASP M . n M 1 2 SER 2 2 2 SER SER M . n M 1 3 GLN 3 3 3 GLN GLN M . n M 1 4 LYS 4 4 4 LYS LYS M . n M 1 5 TRP 5 5 5 TRP TRP M . n M 1 6 ILE 6 6 6 ILE ILE M . n M 1 7 VAL 7 7 7 VAL VAL M . n M 1 8 PHE 8 8 8 PHE PHE M . n M 1 9 LEU 9 9 9 LEU LEU M . n M 1 10 LEU 10 10 10 LEU LEU M . n M 1 11 PHE 11 11 11 PHE PHE M . n M 1 12 LEU 12 12 12 LEU LEU M . n M 1 13 ILE 13 13 13 ILE ILE M . n M 1 14 VAL 14 14 14 VAL VAL M . n M 1 15 LEU 15 15 15 LEU LEU M . n M 1 16 LEU 16 16 16 LEU LEU M . n M 1 17 LEU 17 17 17 LEU LEU M . n M 1 18 LEU 18 18 18 LEU LEU M . n M 1 19 ALA 19 19 19 ALA ALA M . n M 1 20 ILE 20 20 20 ILE ILE M . n M 1 21 VAL 21 21 21 VAL VAL M . n M 1 22 PHE 22 22 22 PHE PHE M . n M 1 23 LEU 23 23 23 LEU LEU M . n M 1 24 LEU 24 24 24 LEU LEU M . n M 1 25 ARG 25 25 25 ARG ARG M . n M 1 26 GLY 26 26 ? ? ? M . n N 1 1 ASP 1 1 1 ASP ASP N . n N 1 2 SER 2 2 2 SER SER N . n N 1 3 GLN 3 3 3 GLN GLN N . n N 1 4 LYS 4 4 4 LYS LYS N . n N 1 5 TRP 5 5 5 TRP TRP N . n N 1 6 ILE 6 6 6 ILE ILE N . n N 1 7 VAL 7 7 7 VAL VAL N . n N 1 8 PHE 8 8 8 PHE PHE N . n N 1 9 LEU 9 9 9 LEU LEU N . n N 1 10 LEU 10 10 10 LEU LEU N . n N 1 11 PHE 11 11 11 PHE PHE N . n N 1 12 LEU 12 12 12 LEU LEU N . n N 1 13 ILE 13 13 13 ILE ILE N . n N 1 14 VAL 14 14 14 VAL VAL N . n N 1 15 LEU 15 15 15 LEU LEU N . n N 1 16 LEU 16 16 16 LEU LEU N . n N 1 17 LEU 17 17 17 LEU LEU N . n N 1 18 LEU 18 18 18 LEU LEU N . n N 1 19 ALA 19 19 19 ALA ALA N . n N 1 20 ILE 20 20 20 ILE ILE N . n N 1 21 VAL 21 21 21 VAL VAL N . n N 1 22 PHE 22 22 22 PHE PHE N . n N 1 23 LEU 23 23 23 LEU LEU N . n N 1 24 LEU 24 24 24 LEU LEU N . n N 1 25 ARG 25 25 25 ARG ARG N . n N 1 26 GLY 26 26 26 GLY GLY N . n O 1 1 ASP 1 1 1 ASP ASP O . n O 1 2 SER 2 2 2 SER SER O . n O 1 3 GLN 3 3 3 GLN GLN O . n O 1 4 LYS 4 4 4 LYS LYS O . n O 1 5 TRP 5 5 5 TRP TRP O . n O 1 6 ILE 6 6 6 ILE ILE O . n O 1 7 VAL 7 7 7 VAL VAL O . n O 1 8 PHE 8 8 8 PHE PHE O . n O 1 9 LEU 9 9 9 LEU LEU O . n O 1 10 LEU 10 10 10 LEU LEU O . n O 1 11 PHE 11 11 11 PHE PHE O . n O 1 12 LEU 12 12 12 LEU LEU O . n O 1 13 ILE 13 13 13 ILE ILE O . n O 1 14 VAL 14 14 14 VAL VAL O . n O 1 15 LEU 15 15 15 LEU LEU O . n O 1 16 LEU 16 16 16 LEU LEU O . n O 1 17 LEU 17 17 17 LEU LEU O . n O 1 18 LEU 18 18 18 LEU LEU O . n O 1 19 ALA 19 19 19 ALA ALA O . n O 1 20 ILE 20 20 20 ILE ILE O . n O 1 21 VAL 21 21 21 VAL VAL O . n O 1 22 PHE 22 22 22 PHE PHE O . n O 1 23 LEU 23 23 23 LEU LEU O . n O 1 24 LEU 24 24 24 LEU LEU O . n O 1 25 ARG 25 25 25 ARG ARG O . n O 1 26 GLY 26 26 ? ? ? O . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email william.degrado@ucsf.edu _pdbx_contact_author.name_first William _pdbx_contact_author.name_last DeGrado _pdbx_contact_author.name_mi F _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4745-263X # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code P 2 C8E 1 101 102 C8E C8E C . Q 2 C8E 1 101 101 C8E C8E D . R 2 C8E 1 101 103 C8E C8E G . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA pentameric 5 2 author_and_software_defined_assembly PISA pentameric 5 3 author_and_software_defined_assembly PISA pentameric 5 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,P,Q 2 1 F,G,H,I,J,R 3 1 K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6410 ? 1 MORE -82 ? 1 'SSA (A^2)' 7910 ? 2 'ABSA (A^2)' 5840 ? 2 MORE -83 ? 2 'SSA (A^2)' 7190 ? 3 'ABSA (A^2)' 6440 ? 3 MORE -84 ? 3 'SSA (A^2)' 7370 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-04-06 2 'Structure model' 1 1 2023-06-28 3 'Structure model' 1 2 2023-07-19 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 3 'Structure model' '_citation.journal_volume' 10 3 'Structure model' '_citation.page_first' 11 3 'Structure model' '_citation.page_last' 12 3 'Structure model' '_citation_author.identifier_ORCID' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x,-y,-z 3 -x,y,-z+1/2 4 -x,-y,z+1/2 5 x+1/2,y+1/2,z 6 x+1/2,-y+1/2,-z 7 -x+1/2,y+1/2,-z+1/2 8 -x+1/2,-y+1/2,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -5.04382095675 23.4322332527 -19.9282165256 0.631943142621 ? -0.0551878471172 ? -0.025027127093 ? 0.596394293108 ? -0.00630182084659 ? 0.777489726823 ? 3.56572847376 ? -1.10634855359 ? -1.61298004062 ? 6.65465544478 ? 3.39223489655 ? 2.584705168 ? -0.356129533428 ? 0.351365514338 ? -0.0509573640268 ? -0.131643392801 ? 0.676897345847 ? -0.596315563186 ? -0.0430360039036 ? 0.373632973807 ? -0.361326746288 ? 2 'X-RAY DIFFRACTION' ? refined -6.77580986601 23.613372056 -29.8025470743 0.484973280393 ? 0.000738794133087 ? 0.0781622749088 ? 0.641262806859 ? -0.0460251103999 ? 0.686826938186 ? 7.19996065943 ? 0.16408853866 ? 1.23022793485 ? 0.533533097199 ? -1.30105752382 ? 3.5629226207 ? 0.602374865425 ? 0.552765393029 ? -0.485221447309 ? -1.13936526428 ? -0.33725667381 ? -2.78081381989 ? 0.0827395296431 ? 0.416114716667 ? -1.44109066209 ? 3 'X-RAY DIFFRACTION' ? refined -16.1927742681 25.0393491084 -31.0607150331 0.59186675273 ? -0.0286858870167 ? -0.000965498554451 ? 0.477825894902 ? 0.0228136930565 ? 0.667150828154 ? 8.91756312458 ? 1.96296294919 ? 1.77779022975 ? 8.58651319474 ? 1.85240264007 ? 4.71482513496 ? -0.615976321202 ? 0.840104674341 ? 0.553833831372 ? -1.14708959578 ? 1.19239138167 ? 0.756813097355 ? -0.321431617469 ? 0.179056616834 ? -0.299307953214 ? 4 'X-RAY DIFFRACTION' ? refined -20.814598608 24.0762941117 -21.8351566219 0.400364711843 ? -0.0431713740547 ? 0.0897160802154 ? -0.380855419931 ? 0.105660811747 ? 1.03497365072 ? 0.421702097627 ? -0.105049301662 ? 0.307973151097 ? 0.776928018376 ? 0.531883648473 ? 0.70096558309 ? 0.0270448824064 ? 0.0905221284431 ? 0.851342179155 ? -1.05114330559 ? 0.0116398656216 ? 0.0922131549513 ? -0.0903474285129 ? 0.113662156913 ? -0.208530782897 ? 5 'X-RAY DIFFRACTION' ? refined -13.9663225407 24.7762125115 -15.1193969622 0.569340001191 ? -0.000749702271355 ? 0.0299772301944 ? 0.510822328004 ? 0.0325564066656 ? 0.621936138442 ? 8.24022399672 ? 0.101217650851 ? 1.29806809125 ? 8.72053849558 ? -2.18985473425 ? 9.17069453674 ? 0.267245448527 ? -0.024163652554 ? 0.449551491828 ? 0.921417550201 ? 0.0302506513562 ? -0.185300569855 ? -0.623652120895 ? 0.0131598113091 ? -0.507693987786 ? 6 'X-RAY DIFFRACTION' ? refined 9.35530458781 22.0173970087 -1.34818744373 0.32380333127 ? -0.0474128197948 ? 0.0610804552287 ? 0.265690698813 ? -0.122258556001 ? 0.793745740433 ? 0.235414152181 ? 0.375651212486 ? 0.893769254596 ? 2.35694628013 ? 0.849515173905 ? 4.65741012778 ? 0.273691050155 ? -0.0222558970459 ? -0.0149916150945 ? -0.00600322330566 ? -0.188616103387 ? -0.963007482746 ? 0.749391413203 ? 0.836905462425 ? -3.39949789567 ? 7 'X-RAY DIFFRACTION' ? refined 3.05529850828 24.363636604 -7.86223597592 0.562201535896 ? -0.0249827298223 ? 0.0246081715559 ? 0.498192875557 ? -0.0196037708531 ? 0.772079912842 ? 7.46948345473 ? 0.863810168209 ? -0.736859208208 ? 2.88343007748 ? 0.990992166822 ? 7.66122395439 ? -0.400902317212 ? 0.539990232321 ? 0.626065468272 ? -1.5913010984 ? 1.17725982749 ? -0.1378793523 ? -0.637154561942 ? 0.464574214454 ? -0.600529318102 ? 8 'X-RAY DIFFRACTION' ? refined -6.43324823484 22.708268147 -3.60985826751 0.646818849926 ? 0.0495652015065 ? -0.194202894 ? 0.374966582222 ? 0.0140847870155 ? 0.904034299939 ? 0.804313893331 ? -0.40777407053 ? -1.09455812426 ? 0.186555680548 ? 0.535627529661 ? 1.58675592522 ? 0.0467199311339 ? 0.485423213059 ? 0.780548514022 ? -0.0844789926094 ? -0.827749623976 ? 0.436312432855 ? -0.973334076679 ? -0.512433618959 ? -2.05471299631 ? 9 'X-RAY DIFFRACTION' ? refined -5.56945078641 22.5549190035 5.68499813 0.513553886969 ? 0.014315127463 ? 0.0520439258451 ? 0.406007460882 ? -0.0148479833675 ? 0.865035023746 ? 1.56398099716 ? 2.3117136787 ? 0.148186936888 ? 3.77278207832 ? -0.945606006977 ? 4.17353878205 ? -0.0961467087437 ? 0.316541922158 ? 0.594674015286 ? 0.989834707994 ? -0.0465220156872 ? 0.828688723821 ? -0.277473379618 ? -0.712120378527 ? -0.22124466592 ? 10 'X-RAY DIFFRACTION' ? refined 4.34551971941 22.2579228351 7.95249286923 0.342875308752 ? -0.0074371121439 ? 0.0255896539841 ? 0.111889874613 ? -0.212919051776 ? 0.77643463051 ? 0.153849561723 ? -0.182986933502 ? 0.209923303112 ? 0.232326388192 ? -0.213763528326 ? 0.207570305741 ? 0.212178434413 ? 0.0647490733739 ? 0.499319484275 ? -0.137318137837 ? 0.249864036356 ? -0.420088074622 ? -0.0800042480961 ? 0.256414063671 ? 0.66157582934 ? 11 'X-RAY DIFFRACTION' ? refined 13.0346727517 21.4159923072 -31.862960623 0.515495215406 ? -0.00837677175407 ? -0.052259947707 ? 0.45081590874 ? 0.053600912277 ? 0.63366252518 ? 4.80763357956 ? 1.91803732502 ? 0.2454850464 ? 2.00355892717 ? -0.387395857689 ? 5.61872967152 ? -0.179430336733 ? 0.143255657208 ? -1.2008494233 ? -2.07628802498 ? 0.268615171057 ? -0.520127798718 ? 0.846859027505 ? -0.466955715912 ? -0.0194650349951 ? 12 'X-RAY DIFFRACTION' ? refined 22.5299694 21.4316813896 -28.6912074075 0.509485374813 ? 0.014930079869 ? 0.0419317306524 ? 0.455251747796 ? 0.0854016299647 ? 0.620650941662 ? 6.74721338753 ? -1.76507389253 ? -1.61189876957 ? 8.59513525217 ? 1.37493964772 ? 4.08784754748 ? -0.0762269895957 ? -0.452371212529 ? -0.415822950751 ? -0.0401924285141 ? -0.249611792363 ? -0.413557377295 ? 0.0866424916787 ? -0.21313536734 ? -0.0710467148305 ? 13 'X-RAY DIFFRACTION' ? refined 22.0312083979 21.4740201658 -18.5789912875 0.383093036514 ? 0.0340387693135 ? -0.0525553573142 ? 0.333318557265 ? 0.089935182817 ? 0.58804199981 ? 6.4558627634 ? -0.667531286477 ? -1.12564277432 ? 9.79067498162 ? 2.15541061183 ? 3.69166088697 ? -0.0918205198478 ? -0.48749068539 ? 0.0606782895316 ? 0.461058294222 ? -0.0193983151534 ? 0.510802097006 ? -0.30698608334 ? -0.0654116319925 ? 0.0243539490125 ? 14 'X-RAY DIFFRACTION' ? refined 12.0729397775 21.6944412634 -15.9596729847 0.39347476225 ? 0.0691282089843 ? 0.120456485647 ? 0.397819960101 ? 0.207872356226 ? 0.687705737712 ? 1.23538770658 ? -2.52925358457 ? 1.51632578204 ? 9.17615946043 ? -3.06782860942 ? 1.90010697782 ? -0.32119288693 ? 0.49500640869 ? 0.274995582521 ? 2.03345845877 ? 0.367663309087 ? 0.991523683083 ? -0.784376129014 ? -0.0952396300518 ? 0.298645193697 ? 15 'X-RAY DIFFRACTION' ? refined 7.02873035225 21.1695689191 -24.0914519134 0.39826424939 ? 0.0150948181884 ? 0.0903401818852 ? 0.357881485308 ? 0.187973785598 ? 1.00347944028 ? 0.475512902443 ? 0.790530140614 ? 0.944722447808 ? 1.57748803061 ? 1.99470139992 ? 2.65130171467 ? -0.291321369459 ? 0.277315089073 ? -0.902517229908 ? 0.764153484221 ? 0.370568525238 ? 1.67511913929 ? 0.540173928056 ? -0.157635641584 ? -0.630775966082 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 2 ? A 24 A 25 ? ? 'chain A' 2 'X-RAY DIFFRACTION' 2 B 1 B 1 ? B 26 B 26 ? ? 'chain B' 3 'X-RAY DIFFRACTION' 3 C 1 C 1 ? C 25 C 25 ? ? 'chain C' 4 'X-RAY DIFFRACTION' 4 D 1 D 1 ? D 26 D 26 ? ? 'chain D' 5 'X-RAY DIFFRACTION' 5 E 1 E 1 ? E 25 E 25 ? ? 'chain E' 6 'X-RAY DIFFRACTION' 6 F 1 F 1 ? F 25 F 25 ? ? 'chain F' 7 'X-RAY DIFFRACTION' 7 G 1 G 1 ? G 25 G 25 ? ? 'chain G' 8 'X-RAY DIFFRACTION' 8 H 1 H 1 ? H 25 H 25 ? ? 'chain H' 9 'X-RAY DIFFRACTION' 9 I 1 I 1 ? I 25 I 25 ? ? 'chain I' 10 'X-RAY DIFFRACTION' 10 J 1 J 1 ? J 25 J 25 ? ? 'chain J' 11 'X-RAY DIFFRACTION' 11 K 1 K 1 ? K 25 K 25 ? ? 'chain K' 12 'X-RAY DIFFRACTION' 12 L 1 L 1 ? L 26 L 26 ? ? 'chain L' 13 'X-RAY DIFFRACTION' 13 M 1 M 1 ? M 26 M 26 ? ? 'chain M' 14 'X-RAY DIFFRACTION' 14 N 1 N 1 ? N 26 N 26 ? ? 'chain N' 15 'X-RAY DIFFRACTION' 15 O 1 O 1 ? O 25 O 25 ? ? 'chain O' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 7UDY _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 4 ? CG ? A LYS 4 CG 2 1 Y 1 A LYS 4 ? CD ? A LYS 4 CD 3 1 Y 1 A LYS 4 ? CE ? A LYS 4 CE 4 1 Y 1 A LYS 4 ? NZ ? A LYS 4 NZ 5 1 Y 1 A ARG 25 ? CG ? A ARG 25 CG 6 1 Y 1 A ARG 25 ? CD ? A ARG 25 CD 7 1 Y 1 A ARG 25 ? NE ? A ARG 25 NE 8 1 Y 1 A ARG 25 ? CZ ? A ARG 25 CZ 9 1 Y 1 A ARG 25 ? NH1 ? A ARG 25 NH1 10 1 Y 1 A ARG 25 ? NH2 ? A ARG 25 NH2 11 1 Y 1 B ASP 1 ? CG ? B ASP 1 CG 12 1 Y 1 B ASP 1 ? OD1 ? B ASP 1 OD1 13 1 Y 1 B ASP 1 ? OD2 ? B ASP 1 OD2 14 1 Y 1 B LYS 4 ? CG ? B LYS 4 CG 15 1 Y 1 B LYS 4 ? CD ? B LYS 4 CD 16 1 Y 1 B LYS 4 ? CE ? B LYS 4 CE 17 1 Y 1 B LYS 4 ? NZ ? B LYS 4 NZ 18 1 Y 1 B PHE 22 ? CG ? B PHE 22 CG 19 1 Y 1 B PHE 22 ? CD1 ? B PHE 22 CD1 20 1 Y 1 B PHE 22 ? CD2 ? B PHE 22 CD2 21 1 Y 1 B PHE 22 ? CE1 ? B PHE 22 CE1 22 1 Y 1 B PHE 22 ? CE2 ? B PHE 22 CE2 23 1 Y 1 B PHE 22 ? CZ ? B PHE 22 CZ 24 1 Y 1 C LYS 4 ? CG ? C LYS 4 CG 25 1 Y 1 C LYS 4 ? CD ? C LYS 4 CD 26 1 Y 1 C LYS 4 ? CE ? C LYS 4 CE 27 1 Y 1 C LYS 4 ? NZ ? C LYS 4 NZ 28 1 Y 1 C ARG 25 ? CG ? C ARG 25 CG 29 1 Y 1 C ARG 25 ? CD ? C ARG 25 CD 30 1 Y 1 C ARG 25 ? NE ? C ARG 25 NE 31 1 Y 1 C ARG 25 ? CZ ? C ARG 25 CZ 32 1 Y 1 C ARG 25 ? NH1 ? C ARG 25 NH1 33 1 Y 1 C ARG 25 ? NH2 ? C ARG 25 NH2 34 1 Y 1 D LYS 4 ? CG ? D LYS 4 CG 35 1 Y 1 D LYS 4 ? CD ? D LYS 4 CD 36 1 Y 1 D LYS 4 ? CE ? D LYS 4 CE 37 1 Y 1 D LYS 4 ? NZ ? D LYS 4 NZ 38 1 Y 1 E LYS 4 ? CD ? E LYS 4 CD 39 1 Y 1 E LYS 4 ? CE ? E LYS 4 CE 40 1 Y 1 E LYS 4 ? NZ ? E LYS 4 NZ 41 1 Y 1 E ARG 25 ? CG ? E ARG 25 CG 42 1 Y 1 E ARG 25 ? CD ? E ARG 25 CD 43 1 Y 1 E ARG 25 ? NE ? E ARG 25 NE 44 1 Y 1 E ARG 25 ? CZ ? E ARG 25 CZ 45 1 Y 1 E ARG 25 ? NH1 ? E ARG 25 NH1 46 1 Y 1 E ARG 25 ? NH2 ? E ARG 25 NH2 47 1 Y 1 F ASP 1 ? CG ? F ASP 1 CG 48 1 Y 1 F ASP 1 ? OD1 ? F ASP 1 OD1 49 1 Y 1 F ASP 1 ? OD2 ? F ASP 1 OD2 50 1 Y 1 F LYS 4 ? CG ? F LYS 4 CG 51 1 Y 1 F LYS 4 ? CD ? F LYS 4 CD 52 1 Y 1 F LYS 4 ? CE ? F LYS 4 CE 53 1 Y 1 F LYS 4 ? NZ ? F LYS 4 NZ 54 1 Y 1 G LYS 4 ? CG ? G LYS 4 CG 55 1 Y 1 G LYS 4 ? CD ? G LYS 4 CD 56 1 Y 1 G LYS 4 ? CE ? G LYS 4 CE 57 1 Y 1 G LYS 4 ? NZ ? G LYS 4 NZ 58 1 Y 1 G ARG 25 ? CG ? G ARG 25 CG 59 1 Y 1 G ARG 25 ? CD ? G ARG 25 CD 60 1 Y 1 G ARG 25 ? NE ? G ARG 25 NE 61 1 Y 1 G ARG 25 ? CZ ? G ARG 25 CZ 62 1 Y 1 G ARG 25 ? NH1 ? G ARG 25 NH1 63 1 Y 1 G ARG 25 ? NH2 ? G ARG 25 NH2 64 1 Y 1 H ASP 1 ? CG ? H ASP 1 CG 65 1 Y 1 H ASP 1 ? OD1 ? H ASP 1 OD1 66 1 Y 1 H ASP 1 ? OD2 ? H ASP 1 OD2 67 1 Y 1 H LYS 4 ? CG ? H LYS 4 CG 68 1 Y 1 H LYS 4 ? CD ? H LYS 4 CD 69 1 Y 1 H LYS 4 ? CE ? H LYS 4 CE 70 1 Y 1 H LYS 4 ? NZ ? H LYS 4 NZ 71 1 Y 1 H ARG 25 ? CG ? H ARG 25 CG 72 1 Y 1 H ARG 25 ? CD ? H ARG 25 CD 73 1 Y 1 H ARG 25 ? NE ? H ARG 25 NE 74 1 Y 1 H ARG 25 ? CZ ? H ARG 25 CZ 75 1 Y 1 H ARG 25 ? NH1 ? H ARG 25 NH1 76 1 Y 1 H ARG 25 ? NH2 ? H ARG 25 NH2 77 1 Y 1 I ASP 1 ? CG ? I ASP 1 CG 78 1 Y 1 I ASP 1 ? OD1 ? I ASP 1 OD1 79 1 Y 1 I ASP 1 ? OD2 ? I ASP 1 OD2 80 1 Y 1 I LYS 4 ? CG ? I LYS 4 CG 81 1 Y 1 I LYS 4 ? CD ? I LYS 4 CD 82 1 Y 1 I LYS 4 ? CE ? I LYS 4 CE 83 1 Y 1 I LYS 4 ? NZ ? I LYS 4 NZ 84 1 Y 1 I PHE 11 ? CD1 ? I PHE 11 CD1 85 1 Y 1 I PHE 11 ? CD2 ? I PHE 11 CD2 86 1 Y 1 I PHE 11 ? CE1 ? I PHE 11 CE1 87 1 Y 1 I PHE 11 ? CE2 ? I PHE 11 CE2 88 1 Y 1 I PHE 11 ? CZ ? I PHE 11 CZ 89 1 Y 1 I ARG 25 ? CG ? I ARG 25 CG 90 1 Y 1 I ARG 25 ? CD ? I ARG 25 CD 91 1 Y 1 I ARG 25 ? NE ? I ARG 25 NE 92 1 Y 1 I ARG 25 ? CZ ? I ARG 25 CZ 93 1 Y 1 I ARG 25 ? NH1 ? I ARG 25 NH1 94 1 Y 1 I ARG 25 ? NH2 ? I ARG 25 NH2 95 1 Y 1 J LYS 4 ? CG ? J LYS 4 CG 96 1 Y 1 J LYS 4 ? CD ? J LYS 4 CD 97 1 Y 1 J LYS 4 ? CE ? J LYS 4 CE 98 1 Y 1 J LYS 4 ? NZ ? J LYS 4 NZ 99 1 Y 1 J ARG 25 ? CG ? J ARG 25 CG 100 1 Y 1 J ARG 25 ? CD ? J ARG 25 CD 101 1 Y 1 J ARG 25 ? NE ? J ARG 25 NE 102 1 Y 1 J ARG 25 ? CZ ? J ARG 25 CZ 103 1 Y 1 J ARG 25 ? NH1 ? J ARG 25 NH1 104 1 Y 1 J ARG 25 ? NH2 ? J ARG 25 NH2 105 1 Y 1 K LYS 4 ? CG ? K LYS 4 CG 106 1 Y 1 K LYS 4 ? CD ? K LYS 4 CD 107 1 Y 1 K LYS 4 ? CE ? K LYS 4 CE 108 1 Y 1 K LYS 4 ? NZ ? K LYS 4 NZ 109 1 Y 1 K ARG 25 ? CG ? K ARG 25 CG 110 1 Y 1 K ARG 25 ? CD ? K ARG 25 CD 111 1 Y 1 K ARG 25 ? NE ? K ARG 25 NE 112 1 Y 1 K ARG 25 ? CZ ? K ARG 25 CZ 113 1 Y 1 K ARG 25 ? NH1 ? K ARG 25 NH1 114 1 Y 1 K ARG 25 ? NH2 ? K ARG 25 NH2 115 1 Y 1 L ARG 25 ? CG ? L ARG 25 CG 116 1 Y 1 L ARG 25 ? CD ? L ARG 25 CD 117 1 Y 1 L ARG 25 ? NE ? L ARG 25 NE 118 1 Y 1 L ARG 25 ? CZ ? L ARG 25 CZ 119 1 Y 1 L ARG 25 ? NH1 ? L ARG 25 NH1 120 1 Y 1 L ARG 25 ? NH2 ? L ARG 25 NH2 121 1 Y 1 M LYS 4 ? CG ? M LYS 4 CG 122 1 Y 1 M LYS 4 ? CD ? M LYS 4 CD 123 1 Y 1 M LYS 4 ? CE ? M LYS 4 CE 124 1 Y 1 M LYS 4 ? NZ ? M LYS 4 NZ 125 1 Y 1 M ARG 25 ? CG ? M ARG 25 CG 126 1 Y 1 M ARG 25 ? CD ? M ARG 25 CD 127 1 Y 1 M ARG 25 ? NE ? M ARG 25 NE 128 1 Y 1 M ARG 25 ? CZ ? M ARG 25 CZ 129 1 Y 1 M ARG 25 ? NH1 ? M ARG 25 NH1 130 1 Y 1 M ARG 25 ? NH2 ? M ARG 25 NH2 131 1 Y 1 N LYS 4 ? CG ? N LYS 4 CG 132 1 Y 1 N LYS 4 ? CD ? N LYS 4 CD 133 1 Y 1 N LYS 4 ? CE ? N LYS 4 CE 134 1 Y 1 N LYS 4 ? NZ ? N LYS 4 NZ 135 1 Y 1 O LYS 4 ? CG ? O LYS 4 CG 136 1 Y 1 O LYS 4 ? CD ? O LYS 4 CD 137 1 Y 1 O LYS 4 ? CE ? O LYS 4 CE 138 1 Y 1 O LYS 4 ? NZ ? O LYS 4 NZ 139 1 Y 1 O ARG 25 ? CG ? O ARG 25 CG 140 1 Y 1 O ARG 25 ? CD ? O ARG 25 CD 141 1 Y 1 O ARG 25 ? NE ? O ARG 25 NE 142 1 Y 1 O ARG 25 ? CZ ? O ARG 25 CZ 143 1 Y 1 O ARG 25 ? NH1 ? O ARG 25 NH1 144 1 Y 1 O ARG 25 ? NH2 ? O ARG 25 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 1 ? A ASP 1 2 1 Y 1 A GLY 26 ? A GLY 26 3 1 Y 1 C GLY 26 ? C GLY 26 4 1 Y 1 E GLY 26 ? E GLY 26 5 1 Y 1 F GLY 26 ? F GLY 26 6 1 Y 1 G GLY 26 ? G GLY 26 7 1 Y 1 H GLY 26 ? H GLY 26 8 1 Y 1 I GLY 26 ? I GLY 26 9 1 Y 1 J GLY 26 ? J GLY 26 10 1 Y 1 K GLY 26 ? K GLY 26 11 1 Y 1 M GLY 26 ? M GLY 26 12 1 Y 1 O GLY 26 ? O GLY 26 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 C8E C1 C N N 57 C8E C2 C N N 58 C8E C3 C N N 59 C8E C4 C N N 60 C8E C5 C N N 61 C8E C6 C N N 62 C8E C7 C N N 63 C8E C8 C N N 64 C8E O9 O N N 65 C8E C10 C N N 66 C8E C11 C N N 67 C8E O12 O N N 68 C8E C13 C N N 69 C8E C14 C N N 70 C8E O15 O N N 71 C8E C16 C N N 72 C8E C17 C N N 73 C8E O18 O N N 74 C8E C19 C N N 75 C8E C20 C N N 76 C8E O21 O N N 77 C8E H11 H N N 78 C8E H12 H N N 79 C8E H13 H N N 80 C8E H21 H N N 81 C8E H22 H N N 82 C8E H31 H N N 83 C8E H32 H N N 84 C8E H41 H N N 85 C8E H42 H N N 86 C8E H51 H N N 87 C8E H52 H N N 88 C8E H61 H N N 89 C8E H62 H N N 90 C8E H71 H N N 91 C8E H72 H N N 92 C8E H81 H N N 93 C8E H82 H N N 94 C8E H101 H N N 95 C8E H102 H N N 96 C8E H111 H N N 97 C8E H112 H N N 98 C8E H131 H N N 99 C8E H132 H N N 100 C8E H141 H N N 101 C8E H142 H N N 102 C8E H161 H N N 103 C8E H162 H N N 104 C8E H171 H N N 105 C8E H172 H N N 106 C8E H191 H N N 107 C8E H192 H N N 108 C8E H201 H N N 109 C8E H202 H N N 110 C8E HO2 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 ILE N N N N 142 ILE CA C N S 143 ILE C C N N 144 ILE O O N N 145 ILE CB C N S 146 ILE CG1 C N N 147 ILE CG2 C N N 148 ILE CD1 C N N 149 ILE OXT O N N 150 ILE H H N N 151 ILE H2 H N N 152 ILE HA H N N 153 ILE HB H N N 154 ILE HG12 H N N 155 ILE HG13 H N N 156 ILE HG21 H N N 157 ILE HG22 H N N 158 ILE HG23 H N N 159 ILE HD11 H N N 160 ILE HD12 H N N 161 ILE HD13 H N N 162 ILE HXT H N N 163 LEU N N N N 164 LEU CA C N S 165 LEU C C N N 166 LEU O O N N 167 LEU CB C N N 168 LEU CG C N N 169 LEU CD1 C N N 170 LEU CD2 C N N 171 LEU OXT O N N 172 LEU H H N N 173 LEU H2 H N N 174 LEU HA H N N 175 LEU HB2 H N N 176 LEU HB3 H N N 177 LEU HG H N N 178 LEU HD11 H N N 179 LEU HD12 H N N 180 LEU HD13 H N N 181 LEU HD21 H N N 182 LEU HD22 H N N 183 LEU HD23 H N N 184 LEU HXT H N N 185 LYS N N N N 186 LYS CA C N S 187 LYS C C N N 188 LYS O O N N 189 LYS CB C N N 190 LYS CG C N N 191 LYS CD C N N 192 LYS CE C N N 193 LYS NZ N N N 194 LYS OXT O N N 195 LYS H H N N 196 LYS H2 H N N 197 LYS HA H N N 198 LYS HB2 H N N 199 LYS HB3 H N N 200 LYS HG2 H N N 201 LYS HG3 H N N 202 LYS HD2 H N N 203 LYS HD3 H N N 204 LYS HE2 H N N 205 LYS HE3 H N N 206 LYS HZ1 H N N 207 LYS HZ2 H N N 208 LYS HZ3 H N N 209 LYS HXT H N N 210 PHE N N N N 211 PHE CA C N S 212 PHE C C N N 213 PHE O O N N 214 PHE CB C N N 215 PHE CG C Y N 216 PHE CD1 C Y N 217 PHE CD2 C Y N 218 PHE CE1 C Y N 219 PHE CE2 C Y N 220 PHE CZ C Y N 221 PHE OXT O N N 222 PHE H H N N 223 PHE H2 H N N 224 PHE HA H N N 225 PHE HB2 H N N 226 PHE HB3 H N N 227 PHE HD1 H N N 228 PHE HD2 H N N 229 PHE HE1 H N N 230 PHE HE2 H N N 231 PHE HZ H N N 232 PHE HXT H N N 233 SER N N N N 234 SER CA C N S 235 SER C C N N 236 SER O O N N 237 SER CB C N N 238 SER OG O N N 239 SER OXT O N N 240 SER H H N N 241 SER H2 H N N 242 SER HA H N N 243 SER HB2 H N N 244 SER HB3 H N N 245 SER HG H N N 246 SER HXT H N N 247 TRP N N N N 248 TRP CA C N S 249 TRP C C N N 250 TRP O O N N 251 TRP CB C N N 252 TRP CG C Y N 253 TRP CD1 C Y N 254 TRP CD2 C Y N 255 TRP NE1 N Y N 256 TRP CE2 C Y N 257 TRP CE3 C Y N 258 TRP CZ2 C Y N 259 TRP CZ3 C Y N 260 TRP CH2 C Y N 261 TRP OXT O N N 262 TRP H H N N 263 TRP H2 H N N 264 TRP HA H N N 265 TRP HB2 H N N 266 TRP HB3 H N N 267 TRP HD1 H N N 268 TRP HE1 H N N 269 TRP HE3 H N N 270 TRP HZ2 H N N 271 TRP HZ3 H N N 272 TRP HH2 H N N 273 TRP HXT H N N 274 VAL N N N N 275 VAL CA C N S 276 VAL C C N N 277 VAL O O N N 278 VAL CB C N N 279 VAL CG1 C N N 280 VAL CG2 C N N 281 VAL OXT O N N 282 VAL H H N N 283 VAL H2 H N N 284 VAL HA H N N 285 VAL HB H N N 286 VAL HG11 H N N 287 VAL HG12 H N N 288 VAL HG13 H N N 289 VAL HG21 H N N 290 VAL HG22 H N N 291 VAL HG23 H N N 292 VAL HXT H N N 293 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 C8E C1 C2 sing N N 54 C8E C1 H11 sing N N 55 C8E C1 H12 sing N N 56 C8E C1 H13 sing N N 57 C8E C2 C3 sing N N 58 C8E C2 H21 sing N N 59 C8E C2 H22 sing N N 60 C8E C3 C4 sing N N 61 C8E C3 H31 sing N N 62 C8E C3 H32 sing N N 63 C8E C4 C5 sing N N 64 C8E C4 H41 sing N N 65 C8E C4 H42 sing N N 66 C8E C5 C6 sing N N 67 C8E C5 H51 sing N N 68 C8E C5 H52 sing N N 69 C8E C6 C7 sing N N 70 C8E C6 H61 sing N N 71 C8E C6 H62 sing N N 72 C8E C7 C8 sing N N 73 C8E C7 H71 sing N N 74 C8E C7 H72 sing N N 75 C8E C8 O9 sing N N 76 C8E C8 H81 sing N N 77 C8E C8 H82 sing N N 78 C8E O9 C10 sing N N 79 C8E C10 C11 sing N N 80 C8E C10 H101 sing N N 81 C8E C10 H102 sing N N 82 C8E C11 O12 sing N N 83 C8E C11 H111 sing N N 84 C8E C11 H112 sing N N 85 C8E O12 C13 sing N N 86 C8E C13 C14 sing N N 87 C8E C13 H131 sing N N 88 C8E C13 H132 sing N N 89 C8E C14 O15 sing N N 90 C8E C14 H141 sing N N 91 C8E C14 H142 sing N N 92 C8E O15 C16 sing N N 93 C8E C16 C17 sing N N 94 C8E C16 H161 sing N N 95 C8E C16 H162 sing N N 96 C8E C17 O18 sing N N 97 C8E C17 H171 sing N N 98 C8E C17 H172 sing N N 99 C8E O18 C19 sing N N 100 C8E C19 C20 sing N N 101 C8E C19 H191 sing N N 102 C8E C19 H192 sing N N 103 C8E C20 O21 sing N N 104 C8E C20 H201 sing N N 105 C8E C20 H202 sing N N 106 C8E O21 HO2 sing N N 107 GLN N CA sing N N 108 GLN N H sing N N 109 GLN N H2 sing N N 110 GLN CA C sing N N 111 GLN CA CB sing N N 112 GLN CA HA sing N N 113 GLN C O doub N N 114 GLN C OXT sing N N 115 GLN CB CG sing N N 116 GLN CB HB2 sing N N 117 GLN CB HB3 sing N N 118 GLN CG CD sing N N 119 GLN CG HG2 sing N N 120 GLN CG HG3 sing N N 121 GLN CD OE1 doub N N 122 GLN CD NE2 sing N N 123 GLN NE2 HE21 sing N N 124 GLN NE2 HE22 sing N N 125 GLN OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 ILE N CA sing N N 136 ILE N H sing N N 137 ILE N H2 sing N N 138 ILE CA C sing N N 139 ILE CA CB sing N N 140 ILE CA HA sing N N 141 ILE C O doub N N 142 ILE C OXT sing N N 143 ILE CB CG1 sing N N 144 ILE CB CG2 sing N N 145 ILE CB HB sing N N 146 ILE CG1 CD1 sing N N 147 ILE CG1 HG12 sing N N 148 ILE CG1 HG13 sing N N 149 ILE CG2 HG21 sing N N 150 ILE CG2 HG22 sing N N 151 ILE CG2 HG23 sing N N 152 ILE CD1 HD11 sing N N 153 ILE CD1 HD12 sing N N 154 ILE CD1 HD13 sing N N 155 ILE OXT HXT sing N N 156 LEU N CA sing N N 157 LEU N H sing N N 158 LEU N H2 sing N N 159 LEU CA C sing N N 160 LEU CA CB sing N N 161 LEU CA HA sing N N 162 LEU C O doub N N 163 LEU C OXT sing N N 164 LEU CB CG sing N N 165 LEU CB HB2 sing N N 166 LEU CB HB3 sing N N 167 LEU CG CD1 sing N N 168 LEU CG CD2 sing N N 169 LEU CG HG sing N N 170 LEU CD1 HD11 sing N N 171 LEU CD1 HD12 sing N N 172 LEU CD1 HD13 sing N N 173 LEU CD2 HD21 sing N N 174 LEU CD2 HD22 sing N N 175 LEU CD2 HD23 sing N N 176 LEU OXT HXT sing N N 177 LYS N CA sing N N 178 LYS N H sing N N 179 LYS N H2 sing N N 180 LYS CA C sing N N 181 LYS CA CB sing N N 182 LYS CA HA sing N N 183 LYS C O doub N N 184 LYS C OXT sing N N 185 LYS CB CG sing N N 186 LYS CB HB2 sing N N 187 LYS CB HB3 sing N N 188 LYS CG CD sing N N 189 LYS CG HG2 sing N N 190 LYS CG HG3 sing N N 191 LYS CD CE sing N N 192 LYS CD HD2 sing N N 193 LYS CD HD3 sing N N 194 LYS CE NZ sing N N 195 LYS CE HE2 sing N N 196 LYS CE HE3 sing N N 197 LYS NZ HZ1 sing N N 198 LYS NZ HZ2 sing N N 199 LYS NZ HZ3 sing N N 200 LYS OXT HXT sing N N 201 PHE N CA sing N N 202 PHE N H sing N N 203 PHE N H2 sing N N 204 PHE CA C sing N N 205 PHE CA CB sing N N 206 PHE CA HA sing N N 207 PHE C O doub N N 208 PHE C OXT sing N N 209 PHE CB CG sing N N 210 PHE CB HB2 sing N N 211 PHE CB HB3 sing N N 212 PHE CG CD1 doub Y N 213 PHE CG CD2 sing Y N 214 PHE CD1 CE1 sing Y N 215 PHE CD1 HD1 sing N N 216 PHE CD2 CE2 doub Y N 217 PHE CD2 HD2 sing N N 218 PHE CE1 CZ doub Y N 219 PHE CE1 HE1 sing N N 220 PHE CE2 CZ sing Y N 221 PHE CE2 HE2 sing N N 222 PHE CZ HZ sing N N 223 PHE OXT HXT sing N N 224 SER N CA sing N N 225 SER N H sing N N 226 SER N H2 sing N N 227 SER CA C sing N N 228 SER CA CB sing N N 229 SER CA HA sing N N 230 SER C O doub N N 231 SER C OXT sing N N 232 SER CB OG sing N N 233 SER CB HB2 sing N N 234 SER CB HB3 sing N N 235 SER OG HG sing N N 236 SER OXT HXT sing N N 237 TRP N CA sing N N 238 TRP N H sing N N 239 TRP N H2 sing N N 240 TRP CA C sing N N 241 TRP CA CB sing N N 242 TRP CA HA sing N N 243 TRP C O doub N N 244 TRP C OXT sing N N 245 TRP CB CG sing N N 246 TRP CB HB2 sing N N 247 TRP CB HB3 sing N N 248 TRP CG CD1 doub Y N 249 TRP CG CD2 sing Y N 250 TRP CD1 NE1 sing Y N 251 TRP CD1 HD1 sing N N 252 TRP CD2 CE2 doub Y N 253 TRP CD2 CE3 sing Y N 254 TRP NE1 CE2 sing Y N 255 TRP NE1 HE1 sing N N 256 TRP CE2 CZ2 sing Y N 257 TRP CE3 CZ3 doub Y N 258 TRP CE3 HE3 sing N N 259 TRP CZ2 CH2 doub Y N 260 TRP CZ2 HZ2 sing N N 261 TRP CZ3 CH2 sing Y N 262 TRP CZ3 HZ3 sing N N 263 TRP CH2 HH2 sing N N 264 TRP OXT HXT sing N N 265 VAL N CA sing N N 266 VAL N H sing N N 267 VAL N H2 sing N N 268 VAL CA C sing N N 269 VAL CA CB sing N N 270 VAL CA HA sing N N 271 VAL C O doub N N 272 VAL C OXT sing N N 273 VAL CB CG1 sing N N 274 VAL CB CG2 sing N N 275 VAL CB HB sing N N 276 VAL CG1 HG11 sing N N 277 VAL CG1 HG12 sing N N 278 VAL CG1 HG13 sing N N 279 VAL CG2 HG21 sing N N 280 VAL CG2 HG22 sing N N 281 VAL CG2 HG23 sing N N 282 VAL OXT HXT sing N N 283 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' K99GM138753 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM122603 2 'National Science Foundation (NSF, United States)' 'United States' CHE1709506 3 'Air Force Office of Scientific Research' 'United States' FA9550-19-1-0331 4 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' _pdbx_entity_nonpoly.comp_id C8E # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6MCT _pdbx_initial_refinement_model.details 'PDB entry 6MCT' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'SDS PAGE (gel electrophoresis)' # _space_group.name_H-M_alt 'C 2 2 21' _space_group.name_Hall 'C 2c 2' _space_group.IT_number 20 _space_group.crystal_system orthorhombic _space_group.id 1 #