HEADER HYDROLASE 24-MAR-22 7UG9 TITLE CRYSTAL STRUCTURE OF RNASE AM PHP DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-3' EXORIBONUCLEASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HISTIDINOL PHOSPHATASE AND RELATED HYDROLASES OF THE PHP COMPND 5 FAMILY,PHP DOMAIN PROTEIN,PHOSPHATASE,PROTEIN TRPH,PUTATIVE ENZYMES, COMPND 6 PUTATIVE PHOSPHOESTERASE,S-ADENOSYLMETHIONINE TRNA COMPND 7 RIBOSYLTRANSFERASE; COMPND 8 EC: 3.1.13.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: YCIV, TRPH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FAD, 3'-FADP, RNA, CAP, DECAPPING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.DOAMEKPOR,L.TONG REVDAT 3 18-OCT-23 7UG9 1 REMARK REVDAT 2 07-SEP-22 7UG9 1 JRNL REVDAT 1 31-AUG-22 7UG9 0 JRNL AUTH S.SHARMA,J.YANG,S.K.DOAMEKPOR,E.GRUDIZEN-NOGALSKA,L.TONG, JRNL AUTH 2 M.KILEDJIAN JRNL TITL IDENTIFICATION OF A NOVEL DEFADDING ACTIVITY IN HUMAN, YEAST JRNL TITL 2 AND BACTERIAL 5' TO 3' EXORIBONUCLEASES. JRNL REF NUCLEIC ACIDS RES. V. 50 8807 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 35904778 JRNL DOI 10.1093/NAR/GKAC617 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 22651 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1900 - 4.0700 0.99 1524 146 0.1578 0.1877 REMARK 3 2 4.0700 - 3.2300 0.99 1524 155 0.1556 0.1664 REMARK 3 3 3.2300 - 2.8200 0.99 1494 132 0.1740 0.2185 REMARK 3 4 2.8200 - 2.5700 0.98 1478 148 0.1814 0.1988 REMARK 3 5 2.5700 - 2.3800 0.99 1479 157 0.1662 0.1975 REMARK 3 6 2.3800 - 2.2400 0.98 1480 145 0.1716 0.2232 REMARK 3 7 2.2400 - 2.1300 0.99 1493 151 0.1642 0.2138 REMARK 3 8 2.1300 - 2.0400 0.98 1484 135 0.1858 0.2425 REMARK 3 9 2.0400 - 1.9600 0.97 1449 144 0.2059 0.2527 REMARK 3 10 1.9600 - 1.8900 0.97 1469 137 0.2196 0.2709 REMARK 3 11 1.8900 - 1.8300 0.97 1445 149 0.2459 0.2693 REMARK 3 12 1.8300 - 1.7800 0.97 1473 144 0.2621 0.3160 REMARK 3 13 1.7800 - 1.7300 0.97 1442 131 0.3078 0.3839 REMARK 3 14 1.7300 - 1.6900 0.93 1394 149 0.3695 0.3937 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1000264136. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42453 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 37.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 2.689 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.65 REMARK 200 R MERGE FOR SHELL (I) : 0.58200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 2YB1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % (W/V) PEG8000, 0.1 M HEPES PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.19450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 TYR A 6 REMARK 465 ALA A 7 REMARK 465 VAL A 8 REMARK 465 ARG A 107 REMARK 465 ASN A 108 REMARK 465 GLN A 109 REMARK 465 ARG A 110 REMARK 465 ALA A 111 REMARK 465 GLN A 112 REMARK 465 LEU A 113 REMARK 465 ILE A 114 REMARK 465 ALA A 115 REMARK 465 GLU A 116 REMARK 465 ARG A 117 REMARK 465 LEU A 118 REMARK 465 GLU A 119 REMARK 465 LYS A 120 REMARK 465 ALA A 121 REMARK 465 GLN A 122 REMARK 465 ILE A 123 REMARK 465 PRO A 124 REMARK 465 GLY A 125 REMARK 465 ALA A 126 REMARK 465 LEU A 127 REMARK 465 GLU A 128 REMARK 465 GLY A 129 REMARK 465 ALA A 130 REMARK 465 GLN A 131 REMARK 465 ARG A 132 REMARK 465 LEU A 133 REMARK 465 ALA A 134 REMARK 465 GLN A 135 REMARK 465 GLY A 136 REMARK 465 GLY A 137 REMARK 465 ALA A 138 REMARK 465 VAL A 139 REMARK 465 THR A 140 REMARK 465 ARG A 141 REMARK 465 GLY A 142 REMARK 465 HIS A 143 REMARK 465 PHE A 144 REMARK 465 ALA A 145 REMARK 465 ARG A 146 REMARK 465 PHE A 147 REMARK 465 LEU A 148 REMARK 465 VAL A 149 REMARK 465 GLU A 150 REMARK 465 CYS A 151 REMARK 465 GLY A 152 REMARK 465 LYS A 153 REMARK 465 ALA A 154 REMARK 465 SER A 155 REMARK 465 SER A 156 REMARK 465 MET A 157 REMARK 465 ALA A 158 REMARK 465 ASP A 159 REMARK 465 VAL A 160 REMARK 465 PHE A 161 REMARK 465 LYS A 162 REMARK 465 LYS A 163 REMARK 465 TYR A 164 REMARK 465 LEU A 165 REMARK 465 ALA A 166 REMARK 465 ARG A 167 REMARK 465 GLY A 168 REMARK 465 LYS A 169 REMARK 465 THR A 170 REMARK 465 GLY A 171 REMARK 465 TYR A 172 REMARK 465 VAL A 173 REMARK 465 PRO A 174 REMARK 465 PRO A 175 REMARK 465 GLN A 176 REMARK 465 PRO A 285 REMARK 465 GLN A 286 REMARK 465 ASN A 287 REMARK 465 THR A 288 REMARK 465 THR A 289 REMARK 465 GLU A 290 REMARK 465 ARG A 291 REMARK 465 GLU A 292 REMARK 465 LEU A 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 103 O HOH A 401 1.97 REMARK 500 O HOH A 427 O HOH A 518 2.01 REMARK 500 OD1 ASN A 234 O HOH A 402 2.05 REMARK 500 O HOH A 440 O HOH A 488 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -112.92 -121.04 REMARK 500 HIS A 198 67.21 25.33 REMARK 500 HIS A 220 21.43 81.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 13 NE2 REMARK 620 2 HIS A 15 NE2 108.2 REMARK 620 3 GLU A 72 OE1 88.9 91.5 REMARK 620 4 ASP A 255 OD1 82.5 91.2 171.4 REMARK 620 5 SO4 A 304 O2 108.3 143.2 93.7 89.0 REMARK 620 6 SO4 A 304 O3 164.6 85.7 97.7 90.6 57.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD1 REMARK 620 2 ASP A 20 OD2 51.4 REMARK 620 3 HIS A 45 NE2 84.8 98.5 REMARK 620 4 HIS A 257 NE2 78.6 96.2 143.4 REMARK 620 5 SO4 A 304 O3 141.8 166.2 81.5 91.7 REMARK 620 6 HOH A 464 O 134.2 82.9 102.2 112.9 83.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 72 OE2 REMARK 620 2 HIS A 83 ND1 97.1 REMARK 620 3 HIS A 198 NE2 104.5 106.3 REMARK 620 4 SO4 A 304 O1 131.3 89.1 120.0 REMARK 620 5 SO4 A 304 O2 95.9 148.8 97.7 61.3 REMARK 620 6 SO4 A 304 S 116.1 119.7 111.3 31.1 30.2 REMARK 620 N 1 2 3 4 5 DBREF 7UG9 A 1 293 UNP J7Q776 J7Q776_ECOLX 1 293 SEQRES 1 A 293 MET SER ASP THR ASN TYR ALA VAL ILE TYR ASP LEU HIS SEQRES 2 A 293 SER HIS THR THR ALA SER ASP GLY CYS LEU THR PRO GLU SEQRES 3 A 293 ALA LEU VAL HIS ARG ALA VAL GLU MET ARG VAL GLY THR SEQRES 4 A 293 LEU ALA ILE THR ASP HIS ASP THR THR ALA ALA ILE ALA SEQRES 5 A 293 PRO ALA ARG GLU GLU ILE SER ARG SER GLY LEU ALA LEU SEQRES 6 A 293 ASN LEU ILE PRO GLY VAL GLU ILE SER THR VAL TRP GLU SEQRES 7 A 293 ASN HIS GLU ILE HIS ILE VAL GLY LEU ASN ILE ASP ILE SEQRES 8 A 293 THR HIS PRO LEU MET CYS GLU PHE LEU ALA GLN GLN THR SEQRES 9 A 293 GLU ARG ARG ASN GLN ARG ALA GLN LEU ILE ALA GLU ARG SEQRES 10 A 293 LEU GLU LYS ALA GLN ILE PRO GLY ALA LEU GLU GLY ALA SEQRES 11 A 293 GLN ARG LEU ALA GLN GLY GLY ALA VAL THR ARG GLY HIS SEQRES 12 A 293 PHE ALA ARG PHE LEU VAL GLU CYS GLY LYS ALA SER SER SEQRES 13 A 293 MET ALA ASP VAL PHE LYS LYS TYR LEU ALA ARG GLY LYS SEQRES 14 A 293 THR GLY TYR VAL PRO PRO GLN TRP CYS THR ILE GLU GLN SEQRES 15 A 293 ALA ILE ASP VAL ILE HIS HIS SER GLY GLY LYS ALA VAL SEQRES 16 A 293 LEU ALA HIS PRO GLY ARG TYR ASN LEU SER ALA LYS TRP SEQRES 17 A 293 LEU LYS ARG LEU VAL ALA HIS PHE ALA GLU HIS HIS GLY SEQRES 18 A 293 ASP ALA MET GLU VAL ALA GLN CYS GLN GLN SER PRO ASN SEQRES 19 A 293 GLU ARG THR GLN LEU ALA ALA LEU ALA ARG GLN HIS HIS SEQRES 20 A 293 LEU TRP ALA SER GLN GLY SER ASP PHE HIS GLN PRO CYS SEQRES 21 A 293 PRO TRP ILE GLU LEU GLY ARG LYS LEU TRP LEU PRO ALA SEQRES 22 A 293 GLY VAL GLU GLY VAL TRP GLN LEU TRP GLU GLN PRO GLN SEQRES 23 A 293 ASN THR THR GLU ARG GLU LEU HET MN A 301 1 HET MN A 302 1 HET MN A 303 1 HET SO4 A 304 5 HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION FORMUL 2 MN 3(MN 2+) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *129(H2 O) HELIX 1 AA1 THR A 24 MET A 35 1 12 HELIX 2 AA2 ALA A 50 SER A 61 1 12 HELIX 3 AA3 HIS A 93 ARG A 106 1 14 HELIX 4 AA4 THR A 179 SER A 190 1 12 HELIX 5 AA5 HIS A 198 ASN A 203 5 6 HELIX 6 AA6 SER A 205 HIS A 219 1 15 HELIX 7 AA7 SER A 232 HIS A 246 1 15 HELIX 8 AA8 TRP A 279 GLN A 284 1 6 SHEET 1 AA1 7 TYR A 10 ASP A 11 0 SHEET 2 AA1 7 THR A 39 ILE A 42 1 O THR A 39 N ASP A 11 SHEET 3 AA1 7 ASN A 66 TRP A 77 1 O ILE A 68 N LEU A 40 SHEET 4 AA1 7 HIS A 80 LEU A 87 -1 O ILE A 84 N ILE A 73 SHEET 5 AA1 7 LYS A 193 LEU A 196 -1 O VAL A 195 N VAL A 85 SHEET 6 AA1 7 ALA A 223 ALA A 227 1 O GLU A 225 N LEU A 196 SHEET 7 AA1 7 TRP A 249 GLN A 252 1 O SER A 251 N VAL A 226 LINK NE2 HIS A 13 MN MN A 303 1555 1555 2.17 LINK NE2 HIS A 15 MN MN A 303 1555 1555 2.14 LINK OD1 ASP A 20 MN MN A 302 1555 1555 2.75 LINK OD2 ASP A 20 MN MN A 302 1555 1555 2.17 LINK NE2 HIS A 45 MN MN A 302 1555 1555 2.23 LINK OE2 GLU A 72 MN MN A 301 1555 1555 2.04 LINK OE1 GLU A 72 MN MN A 303 1555 1555 2.25 LINK ND1 HIS A 83 MN MN A 301 1555 1555 2.11 LINK NE2 HIS A 198 MN MN A 301 1555 1555 2.11 LINK OD1 ASP A 255 MN MN A 303 1555 1555 2.36 LINK NE2 HIS A 257 MN MN A 302 1555 1555 2.18 LINK MN MN A 301 O1 SO4 A 304 1555 1555 2.40 LINK MN MN A 301 O2 SO4 A 304 1555 1555 2.12 LINK MN MN A 301 S SO4 A 304 1555 1555 2.83 LINK MN MN A 302 O3 SO4 A 304 1555 1555 2.10 LINK MN MN A 302 O HOH A 464 1555 1555 2.06 LINK MN MN A 303 O2 SO4 A 304 1555 1555 2.09 LINK MN MN A 303 O3 SO4 A 304 1555 1555 2.69 CRYST1 40.289 74.389 40.079 90.00 118.98 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024821 0.000000 0.013747 0.00000 SCALE2 0.000000 0.013443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028522 0.00000 TER 1632 GLN A 284 HETATM 1633 MN MN A 301 1.312 -6.035 -1.760 1.00 15.30 MN HETATM 1634 MN MN A 302 4.720 -5.419 2.841 1.00 17.62 MN HETATM 1635 MN MN A 303 2.255 -8.386 0.864 1.00 14.36 MN HETATM 1636 S SO4 A 304 1.886 -5.482 0.960 1.00 21.57 S HETATM 1637 O1 SO4 A 304 2.195 -4.531 -0.107 1.00 20.90 O HETATM 1638 O2 SO4 A 304 1.289 -6.631 0.276 1.00 18.29 O HETATM 1639 O3 SO4 A 304 3.054 -5.957 1.686 1.00 20.60 O HETATM 1640 O4 SO4 A 304 0.951 -4.895 1.914 1.00 20.80 O HETATM 1641 O HOH A 401 9.483 -5.845 -7.305 1.00 31.30 O HETATM 1642 O HOH A 402 -22.608 -9.425 -1.000 1.00 37.81 O HETATM 1643 O HOH A 403 16.269 -28.454 10.302 1.00 35.64 O HETATM 1644 O HOH A 404 2.956 -12.968 -19.847 1.00 33.56 O HETATM 1645 O HOH A 405 8.103 -10.952 -20.669 1.00 32.50 O HETATM 1646 O HOH A 406 3.339 -17.520 18.491 1.00 36.86 O HETATM 1647 O HOH A 407 -0.776 -26.800 10.355 1.00 31.69 O HETATM 1648 O HOH A 408 16.877 -9.637 -17.131 1.00 40.82 O HETATM 1649 O HOH A 409 -11.727 6.177 -17.904 1.00 38.06 O HETATM 1650 O HOH A 410 7.843 -29.323 17.950 1.00 37.54 O HETATM 1651 O HOH A 411 0.014 -21.363 -15.455 1.00 36.70 O HETATM 1652 O HOH A 412 -3.374 -10.441 0.751 1.00 30.00 O HETATM 1653 O HOH A 413 0.867 -3.759 4.172 1.00 32.69 O HETATM 1654 O HOH A 414 17.164 -19.307 -3.924 1.00 40.41 O HETATM 1655 O HOH A 415 6.458 -6.516 -3.900 1.00 22.22 O HETATM 1656 O HOH A 416 -2.107 -24.320 -14.450 1.00 39.61 O HETATM 1657 O HOH A 417 -5.094 -15.889 -17.987 1.00 30.67 O HETATM 1658 O HOH A 418 -19.372 -14.206 -6.351 1.00 24.67 O HETATM 1659 O HOH A 419 -9.096 -1.729 -6.776 1.00 26.51 O HETATM 1660 O HOH A 420 -1.881 -15.265 -2.907 1.00 19.29 O HETATM 1661 O HOH A 421 -2.280 -10.748 14.435 1.00 24.90 O HETATM 1662 O HOH A 422 12.495 -15.644 16.069 1.00 26.62 O HETATM 1663 O HOH A 423 11.437 -6.491 8.604 1.00 29.23 O HETATM 1664 O HOH A 424 -10.888 -25.257 -4.631 1.00 34.65 O HETATM 1665 O HOH A 425 16.109 -10.324 2.998 1.00 32.29 O HETATM 1666 O HOH A 426 -1.770 -19.066 -17.275 1.00 32.22 O HETATM 1667 O HOH A 427 -12.694 -7.233 -16.849 1.00 34.09 O HETATM 1668 O HOH A 428 2.154 -3.619 -16.426 1.00 21.29 O HETATM 1669 O HOH A 429 -8.617 -9.836 -2.083 1.00 32.34 O HETATM 1670 O HOH A 430 -1.156 -27.299 -1.118 1.00 32.71 O HETATM 1671 O HOH A 431 -16.354 -22.882 -7.812 1.00 41.52 O HETATM 1672 O HOH A 432 15.539 -12.514 8.800 1.00 26.75 O HETATM 1673 O HOH A 433 17.660 -18.326 2.714 1.00 30.11 O HETATM 1674 O HOH A 434 -3.261 5.698 -15.446 1.00 31.00 O HETATM 1675 O HOH A 435 9.926 -33.073 10.930 1.00 18.88 O HETATM 1676 O HOH A 436 -5.764 -10.090 15.502 1.00 32.78 O HETATM 1677 O HOH A 437 -6.193 4.122 -7.713 1.00 31.40 O HETATM 1678 O HOH A 438 -22.182 -10.497 -4.771 1.00 28.77 O HETATM 1679 O HOH A 439 9.193 -15.052 -0.236 1.00 14.85 O HETATM 1680 O HOH A 440 3.435 -22.651 -14.022 1.00 33.68 O HETATM 1681 O HOH A 441 10.351 -3.306 -17.606 1.00 36.60 O HETATM 1682 O HOH A 442 -3.394 -6.035 2.035 1.00 40.44 O HETATM 1683 O HOH A 443 6.110 -11.302 10.065 1.00 16.44 O HETATM 1684 O HOH A 444 -1.194 1.230 -6.432 1.00 28.48 O HETATM 1685 O HOH A 445 -13.956 4.444 -14.282 1.00 27.17 O HETATM 1686 O HOH A 446 6.255 -17.871 16.798 1.00 25.57 O HETATM 1687 O HOH A 447 15.519 -25.657 3.944 1.00 36.25 O HETATM 1688 O HOH A 448 14.992 -16.843 -5.716 1.00 26.18 O HETATM 1689 O HOH A 449 -3.690 -23.864 18.026 1.00 37.25 O HETATM 1690 O HOH A 450 5.702 -6.173 -20.841 1.00 28.77 O HETATM 1691 O HOH A 451 15.564 -22.249 10.216 1.00 25.78 O HETATM 1692 O HOH A 452 -6.576 -19.068 11.309 1.00 25.39 O HETATM 1693 O HOH A 453 -9.424 6.043 -7.426 1.00 26.44 O HETATM 1694 O HOH A 454 18.436 -13.001 -6.256 1.00 22.29 O HETATM 1695 O HOH A 455 16.937 -11.222 0.778 1.00 31.31 O HETATM 1696 O HOH A 456 -4.233 -13.882 -24.301 1.00 29.45 O HETATM 1697 O HOH A 457 -16.491 2.155 -9.196 1.00 36.56 O HETATM 1698 O HOH A 458 16.581 -24.622 -10.596 1.00 37.60 O HETATM 1699 O HOH A 459 12.520 -32.884 6.741 1.00 30.26 O HETATM 1700 O HOH A 460 -16.989 -15.530 -18.300 1.00 23.02 O HETATM 1701 O HOH A 461 -5.749 -9.185 4.643 1.00 26.34 O HETATM 1702 O HOH A 462 -7.648 -4.376 -19.989 1.00 28.05 O HETATM 1703 O HOH A 463 3.249 -24.724 -9.575 1.00 26.42 O HETATM 1704 O HOH A 464 4.098 -3.500 2.432 1.00 26.50 O HETATM 1705 O HOH A 465 8.010 -24.819 -9.158 1.00 36.51 O HETATM 1706 O HOH A 466 10.330 -28.932 5.944 1.00 22.83 O HETATM 1707 O HOH A 467 1.897 -6.028 -18.798 1.00 23.92 O HETATM 1708 O HOH A 468 -9.306 -26.403 -10.615 1.00 35.67 O HETATM 1709 O HOH A 469 11.274 -14.924 1.655 1.00 20.21 O HETATM 1710 O HOH A 470 16.164 -10.711 -3.169 1.00 25.23 O HETATM 1711 O HOH A 471 14.011 -25.335 -3.204 1.00 37.36 O HETATM 1712 O HOH A 472 -8.777 -7.060 -2.255 1.00 22.78 O HETATM 1713 O HOH A 473 0.080 -7.538 9.734 1.00 18.18 O HETATM 1714 O HOH A 474 -12.157 -19.603 -12.850 1.00 25.68 O HETATM 1715 O HOH A 475 -10.174 -19.420 7.677 1.00 32.88 O HETATM 1716 O HOH A 476 -1.569 -29.183 8.487 1.00 35.51 O HETATM 1717 O HOH A 477 -5.141 -12.369 16.460 1.00 31.86 O HETATM 1718 O HOH A 478 -11.459 -0.614 -3.746 1.00 34.55 O HETATM 1719 O HOH A 479 -13.538 -2.265 -17.855 1.00 30.25 O HETATM 1720 O HOH A 480 11.920 -10.980 14.581 1.00 18.92 O HETATM 1721 O HOH A 481 -3.427 2.143 -7.285 1.00 30.26 O HETATM 1722 O HOH A 482 -14.840 -4.225 -10.803 1.00 36.13 O HETATM 1723 O HOH A 483 -11.776 -1.542 -6.403 1.00 33.50 O HETATM 1724 O HOH A 484 -15.084 -19.200 -16.399 1.00 37.23 O HETATM 1725 O HOH A 485 11.291 -23.578 -4.379 1.00 29.02 O HETATM 1726 O HOH A 486 2.719 2.498 -16.662 1.00 28.94 O HETATM 1727 O HOH A 487 -11.495 -23.863 18.812 1.00 36.50 O HETATM 1728 O HOH A 488 4.573 -22.545 -15.854 1.00 37.93 O HETATM 1729 O HOH A 489 15.490 -19.462 0.889 1.00 21.02 O HETATM 1730 O HOH A 490 -10.719 -21.859 1.376 1.00 33.82 O HETATM 1731 O HOH A 491 9.940 -11.383 -17.884 1.00 32.49 O HETATM 1732 O HOH A 492 4.085 -24.063 17.472 1.00 37.69 O HETATM 1733 O HOH A 493 16.082 -16.354 10.438 1.00 38.13 O HETATM 1734 O HOH A 494 -7.556 -13.323 15.969 1.00 35.23 O HETATM 1735 O HOH A 495 -0.715 -28.185 12.210 1.00 33.37 O HETATM 1736 O HOH A 496 1.327 0.111 -18.532 1.00 32.82 O HETATM 1737 O HOH A 497 -0.975 -5.933 5.666 1.00 31.36 O HETATM 1738 O HOH A 498 -9.077 -22.411 3.703 1.00 29.90 O HETATM 1739 O HOH A 499 7.738 -31.817 9.535 1.00 23.91 O HETATM 1740 O HOH A 500 16.062 -13.831 -2.666 1.00 20.93 O HETATM 1741 O HOH A 501 2.150 -28.914 13.818 1.00 33.43 O HETATM 1742 O HOH A 502 17.682 -26.908 -7.075 1.00 42.64 O HETATM 1743 O HOH A 503 0.340 3.622 -7.434 1.00 30.10 O HETATM 1744 O HOH A 504 -16.642 2.181 -12.635 1.00 27.84 O HETATM 1745 O HOH A 505 15.191 -25.116 0.793 1.00 37.49 O HETATM 1746 O HOH A 506 -2.214 -26.659 13.213 1.00 33.67 O HETATM 1747 O HOH A 507 -16.158 -11.097 4.322 1.00 42.06 O HETATM 1748 O HOH A 508 10.672 -13.280 15.323 1.00 17.71 O HETATM 1749 O HOH A 509 15.744 -31.021 10.669 1.00 33.46 O HETATM 1750 O HOH A 510 6.246 -28.177 4.099 1.00 27.44 O HETATM 1751 O HOH A 511 7.401 -17.845 -19.247 1.00 30.05 O HETATM 1752 O HOH A 512 1.669 -26.997 -10.886 1.00 34.39 O HETATM 1753 O HOH A 513 -20.337 -19.706 -0.332 1.00 40.71 O HETATM 1754 O HOH A 514 -18.612 -16.952 -9.728 1.00 31.27 O HETATM 1755 O HOH A 515 -4.288 -10.391 -27.373 1.00 40.38 O HETATM 1756 O HOH A 516 -3.895 -2.115 -20.148 1.00 36.25 O HETATM 1757 O HOH A 517 -12.783 -21.309 -10.975 1.00 27.30 O HETATM 1758 O HOH A 518 -13.601 -7.340 -18.640 1.00 33.62 O HETATM 1759 O HOH A 519 6.275 -0.893 -16.044 1.00 37.92 O HETATM 1760 O HOH A 520 -7.320 -5.624 -0.546 1.00 32.38 O HETATM 1761 O HOH A 521 -11.007 -27.397 -11.682 1.00 41.94 O HETATM 1762 O HOH A 522 17.020 -15.000 -4.912 1.00 22.79 O HETATM 1763 O HOH A 523 -7.557 -9.378 17.763 1.00 33.26 O HETATM 1764 O HOH A 524 2.256 -3.117 -19.019 1.00 32.00 O HETATM 1765 O HOH A 525 -20.862 -13.538 1.485 1.00 33.81 O HETATM 1766 O HOH A 526 0.143 -5.129 8.986 1.00 37.34 O HETATM 1767 O HOH A 527 17.127 -11.946 4.731 1.00 35.92 O HETATM 1768 O HOH A 528 8.513 -27.639 4.366 1.00 29.82 O HETATM 1769 O HOH A 529 -22.851 -20.552 -1.087 1.00 29.98 O CONECT 46 1635 CONECT 62 1635 CONECT 94 1634 CONECT 95 1634 CONECT 284 1634 CONECT 476 1635 CONECT 477 1633 CONECT 570 1633 CONECT 923 1633 CONECT 1381 1635 CONECT 1403 1634 CONECT 1633 477 570 923 1636 CONECT 1633 1637 1638 CONECT 1634 94 95 284 1403 CONECT 1634 1639 1704 CONECT 1635 46 62 476 1381 CONECT 1635 1638 1639 CONECT 1636 1633 1637 1638 1639 CONECT 1636 1640 CONECT 1637 1633 1636 CONECT 1638 1633 1635 1636 CONECT 1639 1634 1635 1636 CONECT 1640 1636 CONECT 1704 1634 MASTER 358 0 4 8 7 0 0 6 1760 1 24 23 END