data_7UJL # _entry.id 7UJL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7UJL pdb_00007ujl 10.2210/pdb7ujl/pdb WWPDB D_1000264107 ? ? EMDB EMD-26566 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-10-05 2 'Structure model' 1 1 2023-01-11 3 'Structure model' 1 2 2024-06-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_audit_author.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7UJL _pdbx_database_status.recvd_initial_deposition_date 2022-03-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Bacteriophage Lambda Red-Beta N-terminal domain helical assembly in complex with dsDNA' _pdbx_database_related.db_id EMD-26566 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email gokhan_tolun@uow.edu.au _pdbx_contact_author.name_first Tolun _pdbx_contact_author.name_last Gokhan _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1992-062X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Newing, T.P.' 1 0000-0002-7147-6984 'Tolun, G.' 2 0000-0001-6166-9451 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 5649 _citation.page_last ? _citation.title 'Red beta 177 annealase structure reveals details of oligomerization and lambda Red-mediated homologous DNA recombination' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-33090-6 _citation.pdbx_database_id_PubMed 36163171 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Newing, T.P.' 1 ? primary 'Brewster, J.L.' 2 ? primary 'Fitschen, L.J.' 3 ? primary 'Bouwer, J.C.' 4 ? primary 'Johnston, N.P.' 5 ? primary 'Yu, H.' 6 ? primary 'Tolun, G.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Recombination protein bet' 21275.008 1 ? ? 'N-terminal domain (UNP residues 1-177)' ? 2 polymer syn 'Template DNA' 8244.295 1 ? ? ? ? 3 polymer syn 'Complementary DNA' 8351.386 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Red-beta annealase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVD GWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCA RLAFGFAGIYDKDEAERSSHHHHHH ; ;MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVD GWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCA RLAFGFAGIYDKDEAERSSHHHHHH ; A ? 2 polydeoxyribonucleotide no no ;(DT)(DG)(DC)(DA)(DG)(DC)(DA)(DG)(DC)(DT)(DT)(DT)(DA)(DC)(DC)(DA)(DT)(DC)(DT)(DG) (DC)(DC)(DG)(DC)(DT)(DG)(DG) ; TGCAGCAGCTTTACCATCTGCCGCTGG B ? 3 polydeoxyribonucleotide no no ;(DC)(DC)(DA)(DG)(DC)(DG)(DG)(DC)(DA)(DG)(DA)(DT)(DG)(DG)(DT)(DA)(DA)(DA)(DG)(DC) (DT)(DG)(DC)(DT)(DG)(DC)(DA) ; CCAGCGGCAGATGGTAAAGCTGCTGCA C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 THR n 1 4 ALA n 1 5 LEU n 1 6 ALA n 1 7 THR n 1 8 LEU n 1 9 ALA n 1 10 GLY n 1 11 LYS n 1 12 LEU n 1 13 ALA n 1 14 GLU n 1 15 ARG n 1 16 VAL n 1 17 GLY n 1 18 MET n 1 19 ASP n 1 20 SER n 1 21 VAL n 1 22 ASP n 1 23 PRO n 1 24 GLN n 1 25 GLU n 1 26 LEU n 1 27 ILE n 1 28 THR n 1 29 THR n 1 30 LEU n 1 31 ARG n 1 32 GLN n 1 33 THR n 1 34 ALA n 1 35 PHE n 1 36 LYS n 1 37 GLY n 1 38 ASP n 1 39 ALA n 1 40 SER n 1 41 ASP n 1 42 ALA n 1 43 GLN n 1 44 PHE n 1 45 ILE n 1 46 ALA n 1 47 LEU n 1 48 LEU n 1 49 ILE n 1 50 VAL n 1 51 ALA n 1 52 ASN n 1 53 GLN n 1 54 TYR n 1 55 GLY n 1 56 LEU n 1 57 ASN n 1 58 PRO n 1 59 TRP n 1 60 THR n 1 61 LYS n 1 62 GLU n 1 63 ILE n 1 64 TYR n 1 65 ALA n 1 66 PHE n 1 67 PRO n 1 68 ASP n 1 69 LYS n 1 70 GLN n 1 71 ASN n 1 72 GLY n 1 73 ILE n 1 74 VAL n 1 75 PRO n 1 76 VAL n 1 77 VAL n 1 78 GLY n 1 79 VAL n 1 80 ASP n 1 81 GLY n 1 82 TRP n 1 83 SER n 1 84 ARG n 1 85 ILE n 1 86 ILE n 1 87 ASN n 1 88 GLU n 1 89 ASN n 1 90 GLN n 1 91 GLN n 1 92 PHE n 1 93 ASP n 1 94 GLY n 1 95 MET n 1 96 ASP n 1 97 PHE n 1 98 GLU n 1 99 GLN n 1 100 ASP n 1 101 ASN n 1 102 GLU n 1 103 SER n 1 104 CYS n 1 105 THR n 1 106 CYS n 1 107 ARG n 1 108 ILE n 1 109 TYR n 1 110 ARG n 1 111 LYS n 1 112 ASP n 1 113 ARG n 1 114 ASN n 1 115 HIS n 1 116 PRO n 1 117 ILE n 1 118 CYS n 1 119 VAL n 1 120 THR n 1 121 GLU n 1 122 TRP n 1 123 MET n 1 124 ASP n 1 125 GLU n 1 126 CYS n 1 127 ARG n 1 128 ARG n 1 129 GLU n 1 130 PRO n 1 131 PHE n 1 132 LYS n 1 133 THR n 1 134 ARG n 1 135 GLU n 1 136 GLY n 1 137 ARG n 1 138 GLU n 1 139 ILE n 1 140 THR n 1 141 GLY n 1 142 PRO n 1 143 TRP n 1 144 GLN n 1 145 SER n 1 146 HIS n 1 147 PRO n 1 148 LYS n 1 149 ARG n 1 150 MET n 1 151 LEU n 1 152 ARG n 1 153 HIS n 1 154 LYS n 1 155 ALA n 1 156 MET n 1 157 ILE n 1 158 GLN n 1 159 CYS n 1 160 ALA n 1 161 ARG n 1 162 LEU n 1 163 ALA n 1 164 PHE n 1 165 GLY n 1 166 PHE n 1 167 ALA n 1 168 GLY n 1 169 ILE n 1 170 TYR n 1 171 ASP n 1 172 LYS n 1 173 ASP n 1 174 GLU n 1 175 ALA n 1 176 GLU n 1 177 ARG n 1 178 SER n 1 179 SER n 1 180 HIS n 1 181 HIS n 1 182 HIS n 1 183 HIS n 1 184 HIS n 1 185 HIS n 2 1 DT n 2 2 DG n 2 3 DC n 2 4 DA n 2 5 DG n 2 6 DC n 2 7 DA n 2 8 DG n 2 9 DC n 2 10 DT n 2 11 DT n 2 12 DT n 2 13 DA n 2 14 DC n 2 15 DC n 2 16 DA n 2 17 DT n 2 18 DC n 2 19 DT n 2 20 DG n 2 21 DC n 2 22 DC n 2 23 DG n 2 24 DC n 2 25 DT n 2 26 DG n 2 27 DG n 3 1 DC n 3 2 DC n 3 3 DA n 3 4 DG n 3 5 DC n 3 6 DG n 3 7 DG n 3 8 DC n 3 9 DA n 3 10 DG n 3 11 DA n 3 12 DT n 3 13 DG n 3 14 DG n 3 15 DT n 3 16 DA n 3 17 DA n 3 18 DA n 3 19 DG n 3 20 DC n 3 21 DT n 3 22 DG n 3 23 DC n 3 24 DT n 3 25 DG n 3 26 DC n 3 27 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 185 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'bet, betA, red-beta, redB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia virus Lambda' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10710 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ;pET24a containing the truncated N-terminal 177-residue fragment of the bet gene followed by a SSHHHHHH tag under the control of the lac repressor system ; _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 27 'Escherichia coli' ? 562 ? 3 1 sample 1 27 'Escherichia coli' ? 562 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 TRP 59 59 59 TRP TRP A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 TRP 122 122 122 TRP TRP A . n A 1 123 MET 123 123 123 MET MET A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 CYS 126 126 126 CYS CYS A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 THR 133 133 ? ? ? A . n A 1 134 ARG 134 134 ? ? ? A . n A 1 135 GLU 135 135 ? ? ? A . n A 1 136 GLY 136 136 ? ? ? A . n A 1 137 ARG 137 137 ? ? ? A . n A 1 138 GLU 138 138 ? ? ? A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 TRP 143 143 143 TRP TRP A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 PRO 147 147 147 PRO PRO A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 MET 150 150 150 MET MET A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 HIS 153 153 153 HIS HIS A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 MET 156 156 156 MET MET A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 CYS 159 159 159 CYS CYS A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 TYR 170 170 ? ? ? A . n A 1 171 ASP 171 171 ? ? ? A . n A 1 172 LYS 172 172 ? ? ? A . n A 1 173 ASP 173 173 ? ? ? A . n A 1 174 GLU 174 174 ? ? ? A . n A 1 175 ALA 175 175 ? ? ? A . n A 1 176 GLU 176 176 ? ? ? A . n A 1 177 ARG 177 177 ? ? ? A . n A 1 178 SER 178 178 ? ? ? A . n A 1 179 SER 179 179 ? ? ? A . n A 1 180 HIS 180 180 ? ? ? A . n A 1 181 HIS 181 181 ? ? ? A . n A 1 182 HIS 182 182 ? ? ? A . n A 1 183 HIS 183 183 ? ? ? A . n A 1 184 HIS 184 184 ? ? ? A . n A 1 185 HIS 185 185 ? ? ? A . n B 2 1 DT 1 0 ? ? ? B . n B 2 2 DG 2 1 1 DG DG B . n B 2 3 DC 3 2 2 DC DC B . n B 2 4 DA 4 3 3 DA DA B . n B 2 5 DG 5 4 4 DG DG B . n B 2 6 DC 6 5 ? ? ? B . n B 2 7 DA 7 6 ? ? ? B . n B 2 8 DG 8 7 ? ? ? B . n B 2 9 DC 9 8 ? ? ? B . n B 2 10 DT 10 9 ? ? ? B . n B 2 11 DT 11 10 ? ? ? B . n B 2 12 DT 12 11 ? ? ? B . n B 2 13 DA 13 12 ? ? ? B . n B 2 14 DC 14 13 ? ? ? B . n B 2 15 DC 15 14 ? ? ? B . n B 2 16 DA 16 15 ? ? ? B . n B 2 17 DT 17 16 ? ? ? B . n B 2 18 DC 18 17 ? ? ? B . n B 2 19 DT 19 18 ? ? ? B . n B 2 20 DG 20 19 ? ? ? B . n B 2 21 DC 21 20 ? ? ? B . n B 2 22 DC 22 21 ? ? ? B . n B 2 23 DG 23 22 ? ? ? B . n B 2 24 DC 24 23 ? ? ? B . n B 2 25 DT 25 24 ? ? ? B . n B 2 26 DG 26 25 ? ? ? B . n B 2 27 DG 27 26 ? ? ? B . n C 3 1 DC 1 -18 ? ? ? C . n C 3 2 DC 2 -17 ? ? ? C . n C 3 3 DA 3 -16 ? ? ? C . n C 3 4 DG 4 -15 ? ? ? C . n C 3 5 DC 5 -14 ? ? ? C . n C 3 6 DG 6 -13 ? ? ? C . n C 3 7 DG 7 -12 ? ? ? C . n C 3 8 DC 8 -11 ? ? ? C . n C 3 9 DA 9 -10 ? ? ? C . n C 3 10 DG 10 -9 ? ? ? C . n C 3 11 DA 11 -8 ? ? ? C . n C 3 12 DT 12 -7 ? ? ? C . n C 3 13 DG 13 -6 ? ? ? C . n C 3 14 DG 14 -5 ? ? ? C . n C 3 15 DT 15 -4 ? ? ? C . n C 3 16 DA 16 -3 ? ? ? C . n C 3 17 DA 17 -2 ? ? ? C . n C 3 18 DA 18 -1 ? ? ? C . n C 3 19 DG 19 0 ? ? ? C . n C 3 20 DC 20 1 1 DC DC C . n C 3 21 DT 21 2 2 DT DT C . n C 3 22 DG 22 3 3 DG DG C . n C 3 23 DC 23 4 4 DC DC C . n C 3 24 DT 24 5 ? ? ? C . n C 3 25 DG 25 6 ? ? ? C . n C 3 26 DC 26 7 ? ? ? C . n C 3 27 DA 27 8 ? ? ? C . n # _software.citation_id ? _software.classification 'model building' _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location https://www.rbvi.ucsf.edu/chimerax/ _software.mods ? _software.name 'UCSF ChimeraX' _software.os Windows _software.os_version ? _software.type package _software.version 1.3/v9 _software.pdbx_ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7UJL _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7UJL _struct.title 'Bacteriophage Lambda Red-Beta N-terminal domain helical assembly in complex with dsDNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7UJL _struct_keywords.text ;Annealase, Synaptase, SSAP, Single-strand annealing protein, DNA annealing intermediate, Recombinase, Two-component recombinase, Viral, DNA-binding, RECOMBINATION-DNA complex ; _struct_keywords.pdbx_keywords RECOMBINATION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP VBET_LAMBD P03698 ? 1 ;MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVD GWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCA RLAFGFAGIYDKDEAER ; 1 2 PDB 7UJL 7UJL ? 2 ? 1 3 PDB 7UJL 7UJL ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7UJL A 1 ? 177 ? P03698 1 ? 177 ? 1 177 2 2 7UJL B 1 ? 27 ? 7UJL 0 ? 26 ? 0 26 3 3 7UJL C 1 ? 27 ? 7UJL -18 ? 8 ? -18 8 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7UJL SER A 178 ? UNP P03698 ? ? 'expression tag' 178 1 1 7UJL SER A 179 ? UNP P03698 ? ? 'expression tag' 179 2 1 7UJL HIS A 180 ? UNP P03698 ? ? 'expression tag' 180 3 1 7UJL HIS A 181 ? UNP P03698 ? ? 'expression tag' 181 4 1 7UJL HIS A 182 ? UNP P03698 ? ? 'expression tag' 182 5 1 7UJL HIS A 183 ? UNP P03698 ? ? 'expression tag' 183 6 1 7UJL HIS A 184 ? UNP P03698 ? ? 'expression tag' 184 7 1 7UJL HIS A 185 ? UNP P03698 ? ? 'expression tag' 185 8 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'representative helical assembly' ? 180-meric 180 2 'helical asymmetric unit' ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C 2 1 A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details '1-start left-handed helical assembly with a helical rise of 2.078 A and a twist of -12.947 degrees' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'helical symmetry operation' ? ? 0.87956600 -0.47577800 0.00000000 111.96600 0.47577800 0.87956600 0.00000000 -66.67410 0.00000000 0.00000000 1.00000000 -62.34000 3 'helical symmetry operation' ? ? 0.96380300 -0.26661600 0.00000000 56.87040 0.26661600 0.96380300 0.00000000 -43.24010 0.00000000 0.00000000 1.00000000 -60.26200 4 'helical symmetry operation' ? ? 0.99903600 -0.04389800 0.00000000 8.42609 0.04389800 0.99903600 0.00000000 -8.05784 0.00000000 0.00000000 1.00000000 -58.18400 5 'helical symmetry operation' ? ? 0.98347400 0.18105100 0.00000000 -30.90410 -0.18105100 0.98347400 0.00000000 37.08400 0.00000000 0.00000000 1.00000000 -56.10600 6 'helical symmetry operation' ? ? 0.91790700 0.39679500 0.00000000 -59.12040 -0.39679500 0.91790700 0.00000000 89.89010 0.00000000 0.00000000 1.00000000 -54.02800 7 'helical symmetry operation' ? ? 0.80567000 0.59236500 0.00000000 -74.78820 -0.59236500 0.80567000 0.00000000 147.67600 0.00000000 0.00000000 1.00000000 -51.95000 8 'helical symmetry operation' ? ? 0.65246900 0.75781600 0.00000000 -77.11090 -0.75781600 0.65246900 0.00000000 207.50200 0.00000000 0.00000000 1.00000000 -49.87200 9 'helical symmetry operation' ? ? 0.46609300 0.88473600 0.00000000 -65.97030 -0.88473600 0.46609300 0.00000000 266.32900 0.00000000 0.00000000 1.00000000 -47.79400 10 'helical symmetry operation' ? ? 0.25601900 0.96667200 0.00000000 -41.93300 -0.96667200 0.25601900 0.00000000 321.16300 0.00000000 0.00000000 1.00000000 -45.71600 11 'helical symmetry operation' ? ? 0.03292800 0.99945800 0.00000000 -6.22099 -0.99945800 0.03292800 0.00000000 369.21900 0.00000000 0.00000000 1.00000000 -43.63800 12 'helical symmetry operation' ? ? -0.19183700 0.98142700 0.00000000 39.34990 -0.98142700 -0.19183700 0.00000000 408.05100 0.00000000 0.00000000 1.00000000 -41.56000 13 'helical symmetry operation' ? ? -0.40684800 0.91349600 0.00000000 92.46250 -0.91349600 -0.40684800 0.00000000 435.68600 0.00000000 0.00000000 1.00000000 -39.48200 14 'helical symmetry operation' ? ? -0.60117400 0.79911800 0.00000000 150.41700 -0.79911800 -0.60117400 0.00000000 450.71800 0.00000000 0.00000000 1.00000000 -37.40400 15 'helical symmetry operation' ? ? -0.76493300 0.64411000 0.00000000 210.26500 -0.64411000 -0.76493300 0.00000000 452.38400 0.00000000 0.00000000 1.00000000 -35.32600 16 'helical symmetry operation' ? ? -0.88979900 0.45635300 0.00000000 268.96600 -0.45635300 -0.88979900 0.00000000 440.59800 0.00000000 0.00000000 1.00000000 -33.24800 17 'helical symmetry operation' ? ? -0.96942400 0.24539200 0.00000000 323.53300 -0.24539200 -0.96942400 0.00000000 415.96100 0.00000000 0.00000000 1.00000000 -31.17000 18 'helical symmetry operation' ? ? -0.99975900 0.02195400 0.00000000 371.19400 -0.02195400 -0.99975900 0.00000000 379.72300 0.00000000 0.00000000 1.00000000 -29.09200 19 'helical symmetry operation' ? ? -0.97926200 -0.20259900 0.00000000 409.52300 0.20259900 -0.97926200 0.00000000 333.72900 0.00000000 0.00000000 1.00000000 -27.01400 20 'helical symmetry operation' ? ? -0.90897400 -0.41685200 0.00000000 436.57300 0.41685200 -0.90897400 0.00000000 280.31600 0.00000000 0.00000000 1.00000000 -24.93600 21 'helical symmetry operation' ? ? -0.79247100 -0.60991000 0.00000000 450.96900 0.60991000 -0.79247100 0.00000000 222.20000 0.00000000 0.00000000 1.00000000 -22.85800 22 'helical symmetry operation' ? ? -0.63567400 -0.77195800 0.00000000 451.97700 0.77195800 -0.63567400 0.00000000 162.33700 0.00000000 0.00000000 1.00000000 -20.78000 23 'helical symmetry operation' ? ? -0.44655700 -0.89475500 0.00000000 439.54800 0.89475500 -0.44655700 0.00000000 103.76900 0.00000000 0.00000000 1.00000000 -18.70200 24 'helical symmetry operation' ? ? -0.23473500 -0.97205900 0.00000000 414.31300 0.97205900 -0.23473500 0.00000000 49.47560 0.00000000 0.00000000 1.00000000 -16.62400 25 'helical symmetry operation' ? ? -0.01097800 -0.99994000 0.00000000 377.55400 0.99994000 -0.01097800 0.00000000 2.21602 0.00000000 0.00000000 1.00000000 -14.54600 26 'helical symmetry operation' ? ? 0.21333700 -0.97697900 0.00000000 331.14200 0.97697900 0.21333700 0.00000000 -35.60640 0.00000000 0.00000000 1.00000000 -12.46800 27 'helical symmetry operation' ? ? 0.42680600 -0.90434300 0.00000000 277.43500 0.90434300 0.42680600 0.00000000 -62.06860 0.00000000 0.00000000 1.00000000 -10.39000 28 'helical symmetry operation' ? ? 0.61857300 -0.78572700 0.00000000 219.16500 0.78572700 0.61857300 0.00000000 -75.82510 0.00000000 0.00000000 1.00000000 -8.31200 29 'helical symmetry operation' ? ? 0.77888900 -0.62716100 0.00000000 159.29400 0.62716100 0.77888900 0.00000000 -76.17650 0.00000000 0.00000000 1.00000000 -6.23400 30 'helical symmetry operation' ? ? 0.89960400 -0.43670800 0.00000000 100.86700 0.43670800 0.89960400 0.00000000 -63.10490 0.00000000 0.00000000 1.00000000 -4.15600 31 'helical symmetry operation' ? ? 0.97457800 -0.22405000 0.00000000 46.85320 0.22405000 0.97457800 0.00000000 -37.27500 0.00000000 0.00000000 1.00000000 -2.07800 32 'helical symmetry operation' ? ? 0.97457800 0.22405000 0.00000000 -37.31060 -0.22405000 0.97457800 0.00000000 46.82480 0.00000000 0.00000000 1.00000000 2.07800 33 'helical symmetry operation' ? ? 0.89960400 0.43670800 0.00000000 -63.18160 -0.43670800 0.89960400 0.00000000 100.81900 0.00000000 0.00000000 1.00000000 4.15600 34 'helical symmetry operation' ? ? 0.77888900 0.62716100 0.00000000 -76.29760 -0.62716100 0.77888900 0.00000000 159.23600 0.00000000 0.00000000 1.00000000 6.23400 35 'helical symmetry operation' ? ? 0.61857300 0.78572700 0.00000000 -75.99180 -0.78572700 0.61857300 0.00000000 219.10700 0.00000000 0.00000000 1.00000000 8.31200 36 'helical symmetry operation' ? ? 0.42680600 0.90434300 0.00000000 -62.27960 -0.90434300 0.42680600 0.00000000 277.38800 0.00000000 0.00000000 1.00000000 10.39000 37 'helical symmetry operation' ? ? 0.21333700 0.97697900 0.00000000 -35.85820 -0.97697900 0.21333700 0.00000000 331.11500 0.00000000 0.00000000 1.00000000 12.46800 38 'helical symmetry operation' ? ? -0.01097800 0.99994000 0.00000000 1.92886 -0.99994000 -0.01097800 0.00000000 377.55600 0.00000000 0.00000000 1.00000000 14.54600 39 'helical symmetry operation' ? ? -0.23473500 0.97205900 0.00000000 49.16050 -0.97205900 -0.23473500 0.00000000 414.35000 0.00000000 0.00000000 1.00000000 16.62400 40 'helical symmetry operation' ? ? -0.44655700 0.89475500 0.00000000 103.43500 -0.89475500 -0.44655700 0.00000000 439.62700 0.00000000 0.00000000 1.00000000 18.70200 41 'helical symmetry operation' ? ? -0.63567400 0.77195800 0.00000000 161.99300 -0.77195800 -0.63567400 0.00000000 452.10100 0.00000000 0.00000000 1.00000000 20.78000 42 'helical symmetry operation' ? ? -0.79247100 0.60991000 0.00000000 221.85700 -0.60991000 -0.79247100 0.00000000 451.13800 0.00000000 0.00000000 1.00000000 22.85800 43 'helical symmetry operation' ? ? -0.90897400 0.41685200 0.00000000 279.98400 -0.41685200 -0.90897400 0.00000000 436.78600 0.00000000 0.00000000 1.00000000 24.93600 44 'helical symmetry operation' ? ? -0.97926200 0.20259900 0.00000000 333.41700 -0.20259900 -0.97926200 0.00000000 409.77700 0.00000000 0.00000000 1.00000000 27.01400 45 'helical symmetry operation' ? ? -0.99975900 -0.02195400 0.00000000 379.44100 0.02195400 -0.99975900 0.00000000 371.48200 0.00000000 0.00000000 1.00000000 29.09200 46 'helical symmetry operation' ? ? -0.96942400 -0.24539200 0.00000000 415.71400 0.24539200 -0.96942400 0.00000000 323.85000 0.00000000 0.00000000 1.00000000 31.17000 47 'helical symmetry operation' ? ? -0.88979900 -0.45635300 0.00000000 440.39400 0.45635300 -0.88979900 0.00000000 269.30100 0.00000000 0.00000000 1.00000000 33.24800 48 'helical symmetry operation' ? ? -0.76493300 -0.64411000 0.00000000 452.22400 0.64411000 -0.76493300 0.00000000 210.60900 0.00000000 0.00000000 1.00000000 35.32600 49 'helical symmetry operation' ? ? -0.60117400 -0.79911800 0.00000000 450.60400 0.79911800 -0.60117400 0.00000000 150.75900 0.00000000 0.00000000 1.00000000 37.40400 50 'helical symmetry operation' ? ? -0.40684800 -0.91349600 0.00000000 435.61500 0.91349600 -0.40684800 0.00000000 92.79390 0.00000000 0.00000000 1.00000000 39.48200 51 'helical symmetry operation' ? ? -0.19183700 -0.98142700 0.00000000 408.02100 0.98142700 -0.19183700 0.00000000 39.66020 0.00000000 0.00000000 1.00000000 41.56000 52 'helical symmetry operation' ? ? 0.03292800 -0.99945800 0.00000000 369.22300 0.99945800 0.03292800 0.00000000 -5.94017 0.00000000 0.00000000 1.00000000 43.63800 53 'helical symmetry operation' ? ? 0.25601900 -0.96667200 0.00000000 321.19500 0.96667200 0.25601900 0.00000000 -41.68870 0.00000000 0.00000000 1.00000000 45.71600 54 'helical symmetry operation' ? ? 0.46609300 -0.88473600 0.00000000 266.37900 0.88473600 0.46609300 0.00000000 -65.76770 0.00000000 0.00000000 1.00000000 47.79400 55 'helical symmetry operation' ? ? 0.65246900 -0.75781600 0.00000000 207.56100 0.75781600 0.65246900 0.00000000 -76.95300 0.00000000 0.00000000 1.00000000 49.87200 56 'helical symmetry operation' ? ? 0.80567000 -0.59236500 0.00000000 147.73200 0.59236500 0.80567000 0.00000000 -74.67590 0.00000000 0.00000000 1.00000000 51.95000 57 'helical symmetry operation' ? ? 0.91790700 -0.39679500 0.00000000 89.93500 0.39679500 0.91790700 0.00000000 -59.05200 0.00000000 0.00000000 1.00000000 54.02800 58 'helical symmetry operation' ? ? 0.98347400 -0.18105100 0.00000000 37.10750 0.18105100 0.98347400 0.00000000 -30.87590 0.00000000 0.00000000 1.00000000 56.10600 59 'helical symmetry operation' ? ? 0.99903600 0.04389800 0.00000000 -8.06424 -0.04389800 0.99903600 0.00000000 8.41996 0.00000000 0.00000000 1.00000000 58.18400 60 'helical symmetry operation' ? ? 0.96380300 0.26661600 0.00000000 -43.28340 -0.26661600 0.96380300 0.00000000 56.83750 0.00000000 0.00000000 1.00000000 60.26200 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 3 ? VAL A 16 ? THR A 3 VAL A 16 1 ? 14 HELX_P HELX_P2 AA2 ASP A 22 ? PHE A 35 ? ASP A 22 PHE A 35 1 ? 14 HELX_P HELX_P3 AA3 SER A 40 ? GLY A 55 ? SER A 40 GLY A 55 1 ? 16 HELX_P HELX_P4 AA4 LYS A 69 ? ASN A 71 ? LYS A 69 ASN A 71 5 ? 3 HELX_P HELX_P5 AA5 GLY A 78 ? GLU A 88 ? GLY A 78 GLU A 88 1 ? 11 HELX_P HELX_P6 AA6 MET A 123 ? ARG A 127 ? MET A 123 ARG A 127 1 ? 5 HELX_P HELX_P7 AA7 GLY A 141 ? HIS A 146 ? GLY A 141 HIS A 146 1 ? 6 HELX_P HELX_P8 AA8 HIS A 146 ? PHE A 164 ? HIS A 146 PHE A 164 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 23 N3 ? ? B DG 1 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 23 O2 ? ? B DG 1 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 23 N4 ? ? B DG 1 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 22 N1 ? ? B DC 2 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 22 O6 ? ? B DC 2 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 22 N2 ? ? B DC 2 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 21 N3 ? ? B DA 3 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 21 O4 ? ? B DA 3 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 20 N3 ? ? B DG 4 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 20 O2 ? ? B DG 4 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 20 N4 ? ? B DG 4 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 63 ? PRO A 67 ? ILE A 63 PRO A 67 AA1 2 ILE A 73 ? VAL A 77 ? ILE A 73 VAL A 77 AA2 1 PHE A 92 ? GLN A 99 ? PHE A 92 GLN A 99 AA2 2 SER A 103 ? ARG A 110 ? SER A 103 ARG A 110 AA2 3 ILE A 117 ? TRP A 122 ? ILE A 117 TRP A 122 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 64 ? N TYR A 64 O VAL A 76 ? O VAL A 76 AA2 1 2 N ASP A 96 ? N ASP A 96 O ARG A 107 ? O ARG A 107 AA2 2 3 N CYS A 104 ? N CYS A 104 O GLU A 121 ? O GLU A 121 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 31 ? ? CZ A ARG 31 ? ? NH2 A ARG 31 ? ? 123.59 120.30 3.29 0.50 N 2 1 OP1 B DG 1 ? ? P B DG 1 ? ? OP2 B DG 1 ? ? 106.94 119.60 -12.66 1.50 N 3 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 124.06 118.90 5.16 0.60 N 4 1 N3 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 115.43 121.90 -6.47 0.70 N 5 1 "C3'" B DC 2 ? ? "O3'" B DC 2 ? ? P B DA 3 ? ? 128.61 119.70 8.91 1.20 Y 6 1 C5 B DA 3 ? ? C6 B DA 3 ? ? N1 B DA 3 ? ? 122.21 117.70 4.51 0.50 N 7 1 "O3'" B DA 3 ? ? P B DG 4 ? ? OP1 B DG 4 ? ? 126.33 110.50 15.83 1.10 Y 8 1 OP1 B DG 4 ? ? P B DG 4 ? ? OP2 B DG 4 ? ? 106.46 119.60 -13.14 1.50 N 9 1 OP1 C DC 1 ? ? P C DC 1 ? ? OP2 C DC 1 ? ? 107.38 119.60 -12.22 1.50 N 10 1 "O4'" C DT 2 ? ? "C4'" C DT 2 ? ? "C3'" C DT 2 ? ? 109.70 106.00 3.70 0.60 N 11 1 N3 C DT 2 ? ? C2 C DT 2 ? ? O2 C DT 2 ? ? 118.57 122.30 -3.73 0.60 N 12 1 C6 C DT 2 ? ? C5 C DT 2 ? ? C7 C DT 2 ? ? 119.01 122.90 -3.89 0.60 N 13 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 111.94 108.30 3.64 0.30 N 14 1 N1 C DG 3 ? ? C6 C DG 3 ? ? O6 C DG 3 ? ? 115.74 119.90 -4.16 0.60 N 15 1 "O3'" C DG 3 ? ? P C DC 4 ? ? OP1 C DC 4 ? ? 126.44 110.50 15.94 1.10 Y 16 1 OP1 C DC 4 ? ? P C DC 4 ? ? OP2 C DC 4 ? ? 107.68 119.60 -11.92 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 40 ? ? -49.42 150.75 2 1 ASN A 71 ? ? 59.00 10.16 3 1 GLU A 102 ? ? -142.37 -12.43 4 1 PHE A 164 ? ? -125.93 -54.39 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 127 ? ? 0.085 'SIDE CHAIN' 2 1 DC B 2 ? ? 0.124 'SIDE CHAIN' 3 1 DG C 3 ? ? 0.074 'SIDE CHAIN' # _pdbx_helical_symmetry.entry_id 7UJL _pdbx_helical_symmetry.number_of_operations 60 _pdbx_helical_symmetry.rotation_per_n_subunits -12.947 _pdbx_helical_symmetry.rise_per_n_subunits 2.078 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 1 # _em_3d_fitting.entry_id 7UJL _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'Correlation coefficient' _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7UJL _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 2 _em_3d_reconstruction.num_particles 26525 _em_3d_reconstruction.resolution 3.3 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 6.0 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 'Helical complex assembled through sequential addition of complementary oligonucleotides in a controlled environment' 'RedBeta177 oligomeric helical assembly bound to two complementary 27mer ssDNA oligonucleotides' 'MULTIPLE SOURCES' COMPLEX '1, 2, 3' ? ? 2 1 ? 'Red-beta annealase N-terminal domain' RECOMBINANT COMPLEX 1 ? ? 3 1 '27mer ssDNA oligonucleotide' 'Template ssDNA' RECOMBINANT COMPLEX 2 ? ? 4 1 '27mer ssDNA oligonucleotide' 'Complementary ssDNA' RECOMBINANT COMPLEX 3 ? ? # _em_image_scans.entry_id 7UJL _em_image_scans.id 1 _em_image_scans.dimension_height 3710 _em_image_scans.dimension_width 3838 _em_image_scans.frames_per_image 50 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-50 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 7UJL _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification 59500 _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 2500 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 298 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Sample loading volume ranged between 2 and 3 microlitres. Samples were blotted for 5 seconds prior to vitrification.' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7UJL _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7UJL _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A THR 133 ? A THR 133 4 1 Y 1 A ARG 134 ? A ARG 134 5 1 Y 1 A GLU 135 ? A GLU 135 6 1 Y 1 A GLY 136 ? A GLY 136 7 1 Y 1 A ARG 137 ? A ARG 137 8 1 Y 1 A GLU 138 ? A GLU 138 9 1 Y 1 A TYR 170 ? A TYR 170 10 1 Y 1 A ASP 171 ? A ASP 171 11 1 Y 1 A LYS 172 ? A LYS 172 12 1 Y 1 A ASP 173 ? A ASP 173 13 1 Y 1 A GLU 174 ? A GLU 174 14 1 Y 1 A ALA 175 ? A ALA 175 15 1 Y 1 A GLU 176 ? A GLU 176 16 1 Y 1 A ARG 177 ? A ARG 177 17 1 Y 1 A SER 178 ? A SER 178 18 1 Y 1 A SER 179 ? A SER 179 19 1 Y 1 A HIS 180 ? A HIS 180 20 1 Y 1 A HIS 181 ? A HIS 181 21 1 Y 1 A HIS 182 ? A HIS 182 22 1 Y 1 A HIS 183 ? A HIS 183 23 1 Y 1 A HIS 184 ? A HIS 184 24 1 Y 1 A HIS 185 ? A HIS 185 25 1 Y 1 B DT 0 ? B DT 1 26 1 Y 1 B DC 5 ? B DC 6 27 1 Y 1 B DA 6 ? B DA 7 28 1 Y 1 B DG 7 ? B DG 8 29 1 Y 1 B DC 8 ? B DC 9 30 1 Y 1 B DT 9 ? B DT 10 31 1 Y 1 B DT 10 ? B DT 11 32 1 Y 1 B DT 11 ? B DT 12 33 1 Y 1 B DA 12 ? B DA 13 34 1 Y 1 B DC 13 ? B DC 14 35 1 Y 1 B DC 14 ? B DC 15 36 1 Y 1 B DA 15 ? B DA 16 37 1 Y 1 B DT 16 ? B DT 17 38 1 Y 1 B DC 17 ? B DC 18 39 1 Y 1 B DT 18 ? B DT 19 40 1 Y 1 B DG 19 ? B DG 20 41 1 Y 1 B DC 20 ? B DC 21 42 1 Y 1 B DC 21 ? B DC 22 43 1 Y 1 B DG 22 ? B DG 23 44 1 Y 1 B DC 23 ? B DC 24 45 1 Y 1 B DT 24 ? B DT 25 46 1 Y 1 B DG 25 ? B DG 26 47 1 Y 1 B DG 26 ? B DG 27 48 1 Y 1 C DC -18 ? C DC 1 49 1 Y 1 C DC -17 ? C DC 2 50 1 Y 1 C DA -16 ? C DA 3 51 1 Y 1 C DG -15 ? C DG 4 52 1 Y 1 C DC -14 ? C DC 5 53 1 Y 1 C DG -13 ? C DG 6 54 1 Y 1 C DG -12 ? C DG 7 55 1 Y 1 C DC -11 ? C DC 8 56 1 Y 1 C DA -10 ? C DA 9 57 1 Y 1 C DG -9 ? C DG 10 58 1 Y 1 C DA -8 ? C DA 11 59 1 Y 1 C DT -7 ? C DT 12 60 1 Y 1 C DG -6 ? C DG 13 61 1 Y 1 C DG -5 ? C DG 14 62 1 Y 1 C DT -4 ? C DT 15 63 1 Y 1 C DA -3 ? C DA 16 64 1 Y 1 C DA -2 ? C DA 17 65 1 Y 1 C DA -1 ? C DA 18 66 1 Y 1 C DG 0 ? C DG 19 67 1 Y 1 C DT 5 ? C DT 24 68 1 Y 1 C DG 6 ? C DG 25 69 1 Y 1 C DC 7 ? C DC 26 70 1 Y 1 C DA 8 ? C DA 27 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 20 mM KH2PO4 'potassium phosphate' 1 2 5 mM MgCl2 'magnesium chloride' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_molwt.entity_assembly_id _em_entity_assembly_molwt.id _em_entity_assembly_molwt.experimental_flag _em_entity_assembly_molwt.units _em_entity_assembly_molwt.value 1 1 NO KILODALTONS/NANOMETER 114.18 1 2 NO KILODALTONS/NANOMETER 102.26 # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 2 2 ? ? 10710 ? ? 'Escherichia virus Lambda' ? ? 3 3 ? ? 562 ? ? 'Escherichia coli' ? ? 3 4 ? ? 562 ? ? 'Escherichia coli' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 2 2 ? 469008 'Escherichia coli BL21(DE3)' pET24a ? 3 4 ? 562 'Escherichia coli' ? ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -12.947 _em_helical_entity.axial_rise_per_subunit 2.078 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.average_exposure_time 9 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 4710 _em_image_recording.avg_electron_dose_per_subtomogram ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details 'Installed but not used' # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details '922280 particles were initially selected using cryoSPARC filament tracing' _em_particle_selection.method ? _em_particle_selection.num_particles_selected 922280 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? cryoSPARC 3.0 1 ? ? 2 'IMAGE ACQUISITION' ? EPU ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? cryoSPARC 3.0 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ISOLDE ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? 10 'INITIAL EULER ASSIGNMENT' ? cryoSPARC 3.0 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? cryoSPARC 3.0 1 ? ? 12 CLASSIFICATION ? RELION 3.1 1 ? ? 13 RECONSTRUCTION ? cryoSPARC 3.0 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 2.6 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _ndb_struct_conf_na.entry_id 7UJL _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 23 1_555 -0.689 -0.011 -0.123 2.952 27.054 6.257 1 B_DG1:DC4_C B 1 ? C 4 ? 19 1 1 B DC 3 1_555 C DG 22 1_555 0.203 -0.099 -0.073 -14.782 18.716 -3.531 2 B_DC2:DG3_C B 2 ? C 3 ? 19 1 1 B DA 4 1_555 C DT 21 1_555 0.255 0.417 0.874 -2.969 32.400 -19.343 3 B_DA3:DT2_C B 3 ? C 2 ? 20 1 1 B DG 5 1_555 C DC 20 1_555 -0.429 -0.226 -0.057 2.228 29.619 -8.048 4 B_DG4:DC1_C B 4 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 3 1_555 C DG 22 1_555 B DA 4 1_555 C DT 21 1_555 -1.109 3.228 3.689 -8.087 18.426 11.802 -2.992 -2.076 4.806 54.859 24.079 23.297 1 BB_DC2DA3:DT2DG3_CC B 2 ? C 3 ? B 3 ? C 2 ? 1 B DA 4 1_555 C DT 21 1_555 B DG 5 1_555 C DC 20 1_555 0.625 2.428 3.965 2.855 24.538 0.456 -9.187 0.269 2.557 88.363 -10.282 24.708 2 BB_DA3DG4:DC1DT2_CC B 3 ? C 2 ? B 4 ? C 1 ? # _pdbx_audit_support.funding_organization 'National Health and Medical Research Council (NHMRC, Australia)' _pdbx_audit_support.country Australia _pdbx_audit_support.grant_number GNT1184012 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 7UJL _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_