HEADER VIRAL PROTEIN 07-APR-22 7UMR TITLE THE CRYSTAL STRUCTURE OF WILD TYPE PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001034732-1 (TRANS- TITLE 3 FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PA-X; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: A/LUXEMBOURG/43/2009(H1N1); SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE REVDAT 3 25-OCT-23 7UMR 1 REMARK REVDAT 2 29-MAR-23 7UMR 1 JRNL REVDAT 1 12-OCT-22 7UMR 0 JRNL AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, JRNL AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, JRNL AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, JRNL AUTH 4 S.W.WHITE JRNL TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF JRNL TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS JRNL TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE JRNL TITL 4 RESISTANCE POTENTIAL. JRNL REF EUR.J.MED.CHEM. V. 247 15035 2023 JRNL REFN ISSN 0223-5234 JRNL PMID 36603507 JRNL DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 9209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 450 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6000 - 3.6500 0.99 3049 126 0.1845 0.2054 REMARK 3 2 3.6500 - 2.9000 1.00 2886 164 0.2573 0.3544 REMARK 3 3 2.9000 - 2.5300 0.99 2824 160 0.3289 0.3905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.401 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.227 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1553 REMARK 3 ANGLE : 0.491 2097 REMARK 3 CHIRALITY : 0.037 218 REMARK 3 PLANARITY : 0.003 265 REMARK 3 DIHEDRAL : 11.143 225 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2062 35.5983 -7.7586 REMARK 3 T TENSOR REMARK 3 T11: 0.4623 T22: 0.5196 REMARK 3 T33: 0.5628 T12: -0.0301 REMARK 3 T13: -0.0156 T23: -0.2179 REMARK 3 L TENSOR REMARK 3 L11: 1.4718 L22: 5.8562 REMARK 3 L33: 9.4342 L12: -0.6747 REMARK 3 L13: -0.4861 L23: -2.4780 REMARK 3 S TENSOR REMARK 3 S11: -0.2344 S12: -0.1778 S13: 0.2042 REMARK 3 S21: 0.8533 S22: 0.1645 S23: 0.0820 REMARK 3 S31: -0.5723 S32: -0.3519 S33: 0.0909 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0978 48.7286 -21.9561 REMARK 3 T TENSOR REMARK 3 T11: 0.5463 T22: 0.7077 REMARK 3 T33: 0.6250 T12: -0.0272 REMARK 3 T13: -0.2337 T23: -0.1786 REMARK 3 L TENSOR REMARK 3 L11: 1.8608 L22: 6.6000 REMARK 3 L33: 2.6708 L12: -0.7644 REMARK 3 L13: 0.0880 L23: -0.4585 REMARK 3 S TENSOR REMARK 3 S11: -0.2967 S12: 0.4284 S13: 0.0851 REMARK 3 S21: -0.4234 S22: 0.1740 S23: 0.3251 REMARK 3 S31: -0.0954 S32: -0.5656 S33: 0.0417 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6991 37.8300 -27.4444 REMARK 3 T TENSOR REMARK 3 T11: 0.5722 T22: 1.0062 REMARK 3 T33: 0.5837 T12: -0.1673 REMARK 3 T13: -0.1491 T23: -0.2198 REMARK 3 L TENSOR REMARK 3 L11: 6.1579 L22: 1.8549 REMARK 3 L33: 3.9636 L12: 0.5614 REMARK 3 L13: 3.0914 L23: -1.5821 REMARK 3 S TENSOR REMARK 3 S11: -0.5635 S12: -0.0350 S13: -0.1709 REMARK 3 S21: -0.6965 S22: 0.6856 S23: 0.0508 REMARK 3 S31: -0.0383 S32: -1.5610 S33: -0.1548 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0811 27.9728 -20.9213 REMARK 3 T TENSOR REMARK 3 T11: 0.4699 T22: 0.7428 REMARK 3 T33: 0.6728 T12: -0.1741 REMARK 3 T13: 0.0462 T23: -0.3383 REMARK 3 L TENSOR REMARK 3 L11: 1.1039 L22: 5.6198 REMARK 3 L33: 8.2733 L12: -0.7733 REMARK 3 L13: -0.4120 L23: -4.4758 REMARK 3 S TENSOR REMARK 3 S11: -0.0933 S12: 0.1870 S13: -0.4225 REMARK 3 S21: -0.1721 S22: -0.1457 S23: 0.2322 REMARK 3 S31: 0.5651 S32: -0.3725 S33: 0.1439 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UMR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264430. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9220 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.530 REMARK 200 RESOLUTION RANGE LOW (A) : 74.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.55100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.75550 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 65.75950 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.75550 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 65.75950 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.75550 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 65.75950 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.75550 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 65.75950 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.75550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 65.75950 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.75550 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 65.75950 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.75550 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 65.75950 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.75550 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.75550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 65.75950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 ARG A 84 CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LYS A 113 NZ REMARK 470 ARG A 125 CZ NH1 NH2 REMARK 470 LYS A 137 CE NZ REMARK 470 ILE A 138 CG1 CG2 CD1 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 0 -55.48 61.84 REMARK 500 LYS A 73 -87.31 55.29 REMARK 500 ARG A 125 -146.33 -82.58 REMARK 500 ALA A 159 13.29 59.65 REMARK 500 THR A 162 -63.50 60.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QQ4 A 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 89.2 REMARK 620 3 GLU A 119 OE2 160.4 71.5 REMARK 620 4 ILE A 120 O 74.9 80.8 104.4 REMARK 620 5 NVR A 204 O4 106.9 113.0 78.7 165.9 REMARK 620 6 NVR A 204 O5 98.0 168.8 101.6 92.8 73.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 103.3 REMARK 620 3 NVR A 204 O4 135.1 89.8 REMARK 620 4 NVR A 204 O1 95.8 154.8 65.0 REMARK 620 5 HOH A 301 O 160.4 82.5 62.6 85.0 REMARK 620 6 HOH A 302 O 75.0 107.4 141.7 93.2 85.4 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7RKP RELATED DB: PDB DBREF 7UMR A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50 DBREF 7UMR A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196 SEQADV 7UMR MET A -19 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR GLY A -18 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR SER A -17 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR SER A -16 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A -15 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A -14 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A -13 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A -12 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A -11 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A -10 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR SER A -9 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR SER A -8 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR GLY A -7 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR LEU A -6 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR VAL A -5 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR PRO A -4 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR ARG A -3 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR GLY A -2 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR SER A -1 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR HIS A 0 UNP C6H0Y9 EXPRESSION TAG SEQADV 7UMR GLY A 51 UNP C6H0Y9 LINKER SEQADV 7UMR GLY A 52 UNP C6H0Y9 LINKER SEQADV 7UMR SER A 53 UNP C6H0Y9 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET MN A 201 1 HET MN A 202 1 HET QQ4 A 203 41 HET NVR A 204 31 HET SO4 A 205 5 HET SO4 A 206 5 HETNAM MN MANGANESE (II) ION HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETNAM NVR (1P,18Z)-5-HYDROXY-16,21-DIOXA-3,8,28- HETNAM 2 NVR TRIAZATETRACYCLO[20.3.1.1~2,6~.1~11,15~]OCTACOSA- HETNAM 3 NVR 1(26),2(28),5,11(27),12,14,18,22,24-NONAENE-4,7-DIONE HETNAM SO4 SULFATE ION HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) HETSYN NVR SJ001034732-1 (CIS-FORM) FORMUL 2 MN 2(MN 2+) FORMUL 4 QQ4 C36 H56 N6 O6 FORMUL 5 NVR C23 H21 N3 O5 FORMUL 6 SO4 2(O4 S 2-) FORMUL 8 HOH *16(H2 O) HELIX 1 AA1 HIS A 0 PHE A 9 1 10 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 THR A 98 1 16 HELIX 5 AA5 GLU A 126 ASN A 136 1 11 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLN A 193 1 7 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O PHE A 148 N GLY A 121 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 201 1555 1555 2.46 LINK OE1 GLU A 80 MN MN A 202 1555 1555 2.47 LINK OD2 ASP A 108 MN MN A 201 1555 1555 2.43 LINK OD1 ASP A 108 MN MN A 202 1555 1555 2.07 LINK OE2 GLU A 119 MN MN A 201 1555 1555 2.39 LINK O ILE A 120 MN MN A 201 1555 1555 2.08 LINK MN MN A 201 O4 NVR A 204 1555 1555 2.22 LINK MN MN A 201 O5 NVR A 204 1555 1555 2.51 LINK MN MN A 202 O4 NVR A 204 1555 1555 2.73 LINK MN MN A 202 O1 NVR A 204 1555 1555 2.00 LINK MN MN A 202 O HOH A 301 1555 1555 2.62 LINK MN MN A 202 O HOH A 302 1555 1555 2.62 CRYST1 89.511 89.511 131.519 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011172 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011172 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007603 0.00000