HEADER HYDROLASE/HYDROLASE INHIBITOR 14-APR-22 7UOY TITLE NDM1-INHIBITOR CO-STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLO BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METALLO-BETA-LACTAMASE NDM-1,METALLO-BETA-LACTAMASE,NDM-1, COMPND 5 METALLOBETALACTAMASE NDM-1,NDM1 METALLO-BETA-LACTAMASE,NEW DELHI COMPND 6 METALLO CARBAPENEMASE-1,NEW DELHI METALLO BETA LACTAMASE 1,NEW DELHI COMPND 7 METALLO-BETA-LACTAMASE NDM-1,SUBCLASS B1 METALLO-BETA-LACTAMASE NDM- COMPND 8 1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BLANDM-1, BLA NDM-1, BLANDM1, NDM-1, D647_P47098, DDJ63_29735, SOURCE 5 EC13450_007, NCTC13443_00040, P2146_00143, PCRE380_21, SOURCE 6 PN11X00042NDM_090, PNDM-SX04_5, PNDM10469_138, SAMEA3499901_05193, SOURCE 7 TR3_031, TR4_031; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METALLO-BETA-LACTAMASE INHIBITOR, HYDROLASE, HYDROLASE-HYDROLASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.SCAPIN,T.O.FISCHMANN REVDAT 2 25-OCT-23 7UOY 1 REMARK REVDAT 1 08-MAR-23 7UOY 0 JRNL AUTH M.MANDAL,L.XIAO,W.PAN,G.SCAPIN,G.LI,H.TANG,S.W.YANG,J.PAN, JRNL AUTH 2 Y.ROOT,R.K.DE JESUS,C.YANG,W.PROSISE,P.DAYANANTH,A.MIRZA, JRNL AUTH 3 A.G.THERIEN,K.YOUNG,A.FLATTERY,C.GARLISI,R.ZHANG,D.CHU, JRNL AUTH 4 P.SHETH,I.CHU,J.WU,C.MARKGRAF,H.Y.KIM,R.PAINTER,T.W.MAYHOOD, JRNL AUTH 5 E.DINUNZIO,D.F.WYSS,A.V.BUEVICH,T.FISCHMANN,A.PASTERNAK, JRNL AUTH 6 S.DONG,J.D.HICKS,A.VILLAFANIA,L.LIANG,N.MURGOLO,T.BLACK, JRNL AUTH 7 W.K.HAGMANN,J.TATA,E.R.PARMEE,A.E.WEBER,J.SU,H.TANG JRNL TITL RAPID EVOLUTION OF A FRAGMENT-LIKE MOLECULE TO JRNL TITL 2 PAN-METALLO-BETA-LACTAMASE INHIBITORS: INITIAL LEADS TOWARD JRNL TITL 3 CLINICAL CANDIDATES. JRNL REF J.MED.CHEM. V. 65 16234 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 36475645 JRNL DOI 10.1021/ACS.JMEDCHEM.2C00766 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 63312 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3201 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.09 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3949 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2106 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3749 REMARK 3 BIN R VALUE (WORKING SET) : 0.2086 REMARK 3 BIN FREE R VALUE : 0.2479 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.06 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 200 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3415 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 416 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.17290 REMARK 3 B22 (A**2) : 0.51700 REMARK 3 B33 (A**2) : -6.68980 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.160 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.077 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.076 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.073 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.074 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3579 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4893 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1165 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 95 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 543 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3579 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 4 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 473 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4420 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.77 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.02 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -18.4248 10.1293 -14.6107 REMARK 3 T TENSOR REMARK 3 T11: 0.0194 T22: -0.0366 REMARK 3 T33: -0.0550 T12: -0.0040 REMARK 3 T13: -0.0035 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.5200 L22: 0.6536 REMARK 3 L33: 0.4060 L12: -0.1685 REMARK 3 L13: 0.0111 L23: 0.1718 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: 0.0336 S13: 0.0521 REMARK 3 S21: -0.0500 S22: -0.0101 S23: 0.0298 REMARK 3 S31: -0.0435 S32: -0.0009 S33: -0.0064 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -31.5946 16.3309 -47.4815 REMARK 3 T TENSOR REMARK 3 T11: 0.0208 T22: -0.0290 REMARK 3 T33: -0.0755 T12: -0.0002 REMARK 3 T13: -0.0122 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.7299 L22: 0.5607 REMARK 3 L33: 0.5353 L12: 0.0361 REMARK 3 L13: 0.0320 L23: -0.0044 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.0042 S13: -0.0772 REMARK 3 S21: 0.0242 S22: 0.0016 S23: -0.0026 REMARK 3 S31: 0.0652 S32: -0.0129 S33: -0.0019 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UOY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-22. REMARK 100 THE DEPOSITION ID IS D_1000264514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63605 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.468 REMARK 200 RESOLUTION RANGE LOW (A) : 128.034 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 20.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.54500 REMARK 200 R SYM FOR SHELL (I) : 0.54500 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: BUSTER REMARK 200 STARTING MODEL: 3ZR9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE 0.1 M SODIUM REMARK 280 ACETATE PH 4.6 20.0 W/V POLYETHYLENE GLYCOL 4000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.53700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.01700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.27150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.01700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.53700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.27150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 LYS A 25 REMARK 465 LEU A 26 REMARK 465 GLU A 27 REMARK 465 PHE A 28 REMARK 465 GLY A 29 REMARK 465 GLU A 30 REMARK 465 ILE A 31 REMARK 465 ARG A 32 REMARK 465 PRO A 33 REMARK 465 THR A 34 REMARK 465 ILE A 35 REMARK 465 GLY A 36 REMARK 465 GLN A 37 REMARK 465 GLN A 38 REMARK 465 MET A 39 REMARK 465 GLU A 40 REMARK 465 THR A 41 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 LYS B 25 REMARK 465 LEU B 26 REMARK 465 GLU B 27 REMARK 465 PHE B 28 REMARK 465 GLY B 29 REMARK 465 GLU B 30 REMARK 465 ILE B 31 REMARK 465 ARG B 32 REMARK 465 PRO B 33 REMARK 465 THR B 34 REMARK 465 ILE B 35 REMARK 465 GLY B 36 REMARK 465 GLN B 37 REMARK 465 GLN B 38 REMARK 465 MET B 39 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 67 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 90 148.90 71.35 REMARK 500 HIS A 120 161.85 170.38 REMARK 500 ALA A 174 63.47 -119.86 REMARK 500 ASP B 90 145.17 74.58 REMARK 500 HIS B 120 160.77 179.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 610 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A 611 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B 605 DISTANCE = 6.76 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 120 NE2 REMARK 620 2 HIS A 122 ND1 102.6 REMARK 620 3 HIS A 189 NE2 101.5 109.8 REMARK 620 4 O0F A 304 N1 119.0 108.9 114.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 302 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 124 OD2 REMARK 620 2 CYS A 208 SG 103.6 REMARK 620 3 HIS A 250 NE2 80.5 107.7 REMARK 620 4 O0F A 304 N6 144.4 111.9 88.8 REMARK 620 5 O0F A 304 N1 85.3 104.0 147.5 85.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 303 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 152 OE1 REMARK 620 2 GLU A 152 OE2 54.8 REMARK 620 3 ASP A 223 OD2 90.0 97.6 REMARK 620 4 HOH A 553 O 72.3 127.1 80.0 REMARK 620 5 GLU B 227 OE1 75.5 130.2 78.1 3.6 REMARK 620 6 GLU B 227 OE2 75.2 129.8 76.3 4.6 1.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 303 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 227 OE1 REMARK 620 2 GLU A 227 OE2 54.0 REMARK 620 3 GLU B 152 OE1 17.7 68.2 REMARK 620 4 GLU B 152 OE2 17.2 68.4 1.1 REMARK 620 5 ASP B 223 OD2 13.4 65.2 4.5 3.9 REMARK 620 6 HOH B 563 O 123.8 91.2 118.2 119.3 120.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 120 NE2 REMARK 620 2 HIS B 122 ND1 99.1 REMARK 620 3 HIS B 189 NE2 103.4 110.1 REMARK 620 4 O0F B 304 N1 119.1 105.1 118.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 302 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD2 REMARK 620 2 CYS B 208 SG 98.6 REMARK 620 3 HIS B 250 NE2 81.9 105.3 REMARK 620 4 O0F B 304 N1 82.3 104.2 148.3 REMARK 620 5 O0F B 304 N6 145.2 115.5 82.5 95.3 REMARK 620 N 1 2 3 4 DBREF 7UOY A 29 270 UNP E9NWK5 E9NWK5_KLEPN 29 270 DBREF 7UOY B 29 270 UNP E9NWK5 E9NWK5_KLEPN 29 270 SEQADV 7UOY GLY A 23 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY SER A 24 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY LYS A 25 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY LEU A 26 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY GLU A 27 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY PHE A 28 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY GLY B 23 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY SER B 24 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY LYS B 25 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY LEU B 26 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY GLU B 27 UNP E9NWK5 EXPRESSION TAG SEQADV 7UOY PHE B 28 UNP E9NWK5 EXPRESSION TAG SEQRES 1 A 248 GLY SER LYS LEU GLU PHE GLY GLU ILE ARG PRO THR ILE SEQRES 2 A 248 GLY GLN GLN MET GLU THR GLY ASP GLN ARG PHE GLY ASP SEQRES 3 A 248 LEU VAL PHE ARG GLN LEU ALA PRO ASN VAL TRP GLN HIS SEQRES 4 A 248 THR SER TYR LEU ASP MET PRO GLY PHE GLY ALA VAL ALA SEQRES 5 A 248 SER ASN GLY LEU ILE VAL ARG ASP GLY GLY ARG VAL LEU SEQRES 6 A 248 VAL VAL ASP THR ALA TRP THR ASP ASP GLN THR ALA GLN SEQRES 7 A 248 ILE LEU ASN TRP ILE LYS GLN GLU ILE ASN LEU PRO VAL SEQRES 8 A 248 ALA LEU ALA VAL VAL THR HIS ALA HIS GLN ASP LYS MET SEQRES 9 A 248 GLY GLY MET ASP ALA LEU HIS ALA ALA GLY ILE ALA THR SEQRES 10 A 248 TYR ALA ASN ALA LEU SER ASN GLN LEU ALA PRO GLN GLU SEQRES 11 A 248 GLY MET VAL ALA ALA GLN HIS SER LEU THR PHE ALA ALA SEQRES 12 A 248 ASN GLY TRP VAL GLU PRO ALA THR ALA PRO ASN PHE GLY SEQRES 13 A 248 PRO LEU LYS VAL PHE TYR PRO GLY PRO GLY HIS THR SER SEQRES 14 A 248 ASP ASN ILE THR VAL GLY ILE ASP GLY THR ASP ILE ALA SEQRES 15 A 248 PHE GLY GLY CYS LEU ILE LYS ASP SER LYS ALA LYS SER SEQRES 16 A 248 LEU GLY ASN LEU GLY ASP ALA ASP THR GLU HIS TYR ALA SEQRES 17 A 248 ALA SER ALA ARG ALA PHE GLY ALA ALA PHE PRO LYS ALA SEQRES 18 A 248 SER MET ILE VAL MET SER HIS SER ALA PRO ASP SER ARG SEQRES 19 A 248 ALA ALA ILE THR HIS THR ALA ARG MET ALA ASP LYS LEU SEQRES 20 A 248 ARG SEQRES 1 B 248 GLY SER LYS LEU GLU PHE GLY GLU ILE ARG PRO THR ILE SEQRES 2 B 248 GLY GLN GLN MET GLU THR GLY ASP GLN ARG PHE GLY ASP SEQRES 3 B 248 LEU VAL PHE ARG GLN LEU ALA PRO ASN VAL TRP GLN HIS SEQRES 4 B 248 THR SER TYR LEU ASP MET PRO GLY PHE GLY ALA VAL ALA SEQRES 5 B 248 SER ASN GLY LEU ILE VAL ARG ASP GLY GLY ARG VAL LEU SEQRES 6 B 248 VAL VAL ASP THR ALA TRP THR ASP ASP GLN THR ALA GLN SEQRES 7 B 248 ILE LEU ASN TRP ILE LYS GLN GLU ILE ASN LEU PRO VAL SEQRES 8 B 248 ALA LEU ALA VAL VAL THR HIS ALA HIS GLN ASP LYS MET SEQRES 9 B 248 GLY GLY MET ASP ALA LEU HIS ALA ALA GLY ILE ALA THR SEQRES 10 B 248 TYR ALA ASN ALA LEU SER ASN GLN LEU ALA PRO GLN GLU SEQRES 11 B 248 GLY MET VAL ALA ALA GLN HIS SER LEU THR PHE ALA ALA SEQRES 12 B 248 ASN GLY TRP VAL GLU PRO ALA THR ALA PRO ASN PHE GLY SEQRES 13 B 248 PRO LEU LYS VAL PHE TYR PRO GLY PRO GLY HIS THR SER SEQRES 14 B 248 ASP ASN ILE THR VAL GLY ILE ASP GLY THR ASP ILE ALA SEQRES 15 B 248 PHE GLY GLY CYS LEU ILE LYS ASP SER LYS ALA LYS SER SEQRES 16 B 248 LEU GLY ASN LEU GLY ASP ALA ASP THR GLU HIS TYR ALA SEQRES 17 B 248 ALA SER ALA ARG ALA PHE GLY ALA ALA PHE PRO LYS ALA SEQRES 18 B 248 SER MET ILE VAL MET SER HIS SER ALA PRO ASP SER ARG SEQRES 19 B 248 ALA ALA ILE THR HIS THR ALA ARG MET ALA ASP LYS LEU SEQRES 20 B 248 ARG HET ZN A 301 1 HET CD A 302 1 HET CD A 303 1 HET O0F A 304 20 HET ZN B 301 1 HET CD B 302 1 HET CD B 303 1 HET O0F B 304 20 HETNAM ZN ZINC ION HETNAM CD CADMIUM ION HETNAM O0F (6P)-4-AMINO-6-(2H-TETRAZOL-5-YL)BENZENE-1,3- HETNAM 2 O0F DISULFONAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 CD 4(CD 2+) FORMUL 6 O0F 2(C7 H9 N7 O4 S2) FORMUL 11 HOH *416(H2 O) HELIX 1 AA1 THR A 94 ILE A 109 1 16 HELIX 2 AA2 HIS A 122 GLY A 127 1 6 HELIX 3 AA3 GLY A 128 ALA A 135 1 8 HELIX 4 AA4 ALA A 143 ALA A 149 1 7 HELIX 5 AA5 GLU A 170 ALA A 174 5 5 HELIX 6 AA6 HIS A 228 PHE A 240 1 13 HELIX 7 AA7 ARG A 256 ASP A 267 1 12 HELIX 8 AA8 THR B 94 ILE B 109 1 16 HELIX 9 AA9 HIS B 122 GLY B 127 1 6 HELIX 10 AB1 GLY B 128 ALA B 135 1 8 HELIX 11 AB2 ALA B 143 ALA B 149 1 7 HELIX 12 AB3 PRO B 150 GLY B 153 5 4 HELIX 13 AB4 GLU B 170 ALA B 174 5 5 HELIX 14 AB5 HIS B 228 PHE B 240 1 13 HELIX 15 AB6 ARG B 256 LYS B 268 1 13 SHEET 1 AA1 8 ASP A 43 PHE A 46 0 SHEET 2 AA1 8 LEU A 49 ALA A 55 -1 O PHE A 51 N GLN A 44 SHEET 3 AA1 8 VAL A 58 MET A 67 -1 O GLN A 60 N ARG A 52 SHEET 4 AA1 8 GLY A 71 ASP A 82 -1 O VAL A 73 N LEU A 65 SHEET 5 AA1 8 ARG A 85 VAL A 89 -1 O LEU A 87 N VAL A 80 SHEET 6 AA1 8 VAL A 113 VAL A 117 1 O ALA A 114 N VAL A 86 SHEET 7 AA1 8 ALA A 138 ASN A 142 1 O TYR A 140 N ALA A 116 SHEET 8 AA1 8 HIS A 159 LEU A 161 1 O LEU A 161 N ALA A 141 SHEET 1 AA2 4 LEU A 180 PHE A 183 0 SHEET 2 AA2 4 THR A 195 ILE A 198 -1 O GLY A 197 N LYS A 181 SHEET 3 AA2 4 ILE A 203 PHE A 205 -1 O PHE A 205 N VAL A 196 SHEET 4 AA2 4 MET A 245 VAL A 247 1 O VAL A 247 N ALA A 204 SHEET 1 AA3 8 ASP B 43 PHE B 46 0 SHEET 2 AA3 8 LEU B 49 ALA B 55 -1 O PHE B 51 N GLN B 44 SHEET 3 AA3 8 VAL B 58 TYR B 64 -1 O GLN B 60 N ARG B 52 SHEET 4 AA3 8 ALA B 74 ASP B 82 -1 O ILE B 79 N TRP B 59 SHEET 5 AA3 8 ARG B 85 VAL B 89 -1 O LEU B 87 N VAL B 80 SHEET 6 AA3 8 VAL B 113 VAL B 117 1 O VAL B 117 N VAL B 88 SHEET 7 AA3 8 ALA B 138 ASN B 142 1 O TYR B 140 N ALA B 116 SHEET 8 AA3 8 HIS B 159 LEU B 161 1 O LEU B 161 N ALA B 141 SHEET 1 AA4 4 LEU B 180 PHE B 183 0 SHEET 2 AA4 4 THR B 195 ILE B 198 -1 O GLY B 197 N LYS B 181 SHEET 3 AA4 4 ILE B 203 GLY B 207 -1 O PHE B 205 N VAL B 196 SHEET 4 AA4 4 MET B 245 MET B 248 1 O VAL B 247 N GLY B 206 LINK NE2 HIS A 120 ZN ZN A 301 1555 1555 1.98 LINK ND1 HIS A 122 ZN ZN A 301 1555 1555 1.93 LINK OD2 ASP A 124 CD CD A 302 1555 1555 2.18 LINK OE1 GLU A 152 CD CD B 303 1555 3444 2.45 LINK OE2 GLU A 152 CD CD B 303 1555 3444 2.33 LINK NE2 HIS A 189 ZN ZN A 301 1555 1555 2.06 LINK SG CYS A 208 CD CD A 302 1555 1555 2.39 LINK OD2 ASP A 223 CD CD B 303 1555 3444 2.22 LINK OE1 GLU A 227 CD CD A 303 1555 1555 2.35 LINK OE2 GLU A 227 CD CD A 303 1555 1555 2.49 LINK NE2 HIS A 250 CD CD A 302 1555 1555 2.28 LINK ZN ZN A 301 N1 O0F A 304 1555 1555 2.03 LINK CD CD A 302 N6 O0F A 304 1555 1555 2.32 LINK CD CD A 302 N1 O0F A 304 1555 1555 2.42 LINK CD CD A 303 OE1 GLU B 152 3454 1555 2.57 LINK CD CD A 303 OE2 GLU B 152 3454 1555 2.19 LINK CD CD A 303 OD2 ASP B 223 3454 1555 2.18 LINK CD CD A 303 O HOH B 563 1555 3444 2.62 LINK O HOH A 553 CD CD B 303 3454 1555 2.48 LINK NE2 HIS B 120 ZN ZN B 301 1555 1555 2.02 LINK ND1 HIS B 122 ZN ZN B 301 1555 1555 1.97 LINK OD2 ASP B 124 CD CD B 302 1555 1555 2.25 LINK NE2 HIS B 189 ZN ZN B 301 1555 1555 2.09 LINK SG CYS B 208 CD CD B 302 1555 1555 2.44 LINK OE1 GLU B 227 CD CD B 303 1555 1555 2.44 LINK OE2 GLU B 227 CD CD B 303 1555 1555 2.32 LINK NE2 HIS B 250 CD CD B 302 1555 1555 2.30 LINK ZN ZN B 301 N1 O0F B 304 1555 1555 2.07 LINK CD CD B 302 N1 O0F B 304 1555 1555 2.56 LINK CD CD B 302 N6 O0F B 304 1555 1555 2.05 CRYST1 39.074 78.543 128.034 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025592 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012732 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007810 0.00000