HEADER HYDROLASE 20-APR-22 7UQW TITLE PCC6803 CYANOPHYCINASE S132DAP COVALENTLY BOUND TO CYANOPHYCIN DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYANOPHYCINASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.4.15.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. PCC 6803; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 GENE: CPHB, SLR2001; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CYANOPHYCINASE, CPHB, CYANOPHYCIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.SHARON,T.M.SCHMEING REVDAT 2 18-OCT-23 7UQW 1 REMARK REVDAT 1 10-AUG-22 7UQW 0 JRNL AUTH I.SHARON,M.GROGG,D.HILVERT,T.M.SCHMEING JRNL TITL THE STRUCTURE OF CYANOPHYCINASE IN COMPLEX WITH A JRNL TITL 2 CYANOPHYCIN DEGRADATION INTERMEDIATE. JRNL REF BIOCHIM BIOPHYS ACTA GEN V.1866 30217 2022 JRNL REF 2 SUBJ JRNL REFN ISSN 1872-8006 JRNL PMID 35905922 JRNL DOI 10.1016/J.BBAGEN.2022.130217 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.890 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 133140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 6567 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 61.6100 - 4.6600 1.00 4502 204 0.2035 0.2052 REMARK 3 2 4.6600 - 3.7000 1.00 4352 185 0.1741 0.1918 REMARK 3 3 3.7000 - 3.2300 1.00 4258 255 0.1764 0.1976 REMARK 3 4 3.2300 - 2.9400 1.00 4229 249 0.1810 0.1790 REMARK 3 5 2.9400 - 2.7300 1.00 4249 243 0.1745 0.2125 REMARK 3 6 2.7300 - 2.5600 1.00 4230 214 0.1783 0.1867 REMARK 3 7 2.5600 - 2.4400 1.00 4226 245 0.1708 0.2033 REMARK 3 8 2.4400 - 2.3300 1.00 4239 189 0.1672 0.1833 REMARK 3 9 2.3300 - 2.2400 1.00 4217 224 0.1664 0.1871 REMARK 3 10 2.2400 - 2.1600 1.00 4234 222 0.1658 0.1851 REMARK 3 11 2.1600 - 2.1000 1.00 4197 236 0.1741 0.1934 REMARK 3 12 2.1000 - 2.0400 1.00 4236 172 0.1667 0.2068 REMARK 3 13 2.0400 - 1.9800 1.00 4235 213 0.1659 0.1991 REMARK 3 14 1.9800 - 1.9300 1.00 4159 235 0.1646 0.1754 REMARK 3 15 1.9300 - 1.8900 1.00 4209 218 0.1741 0.1923 REMARK 3 16 1.8900 - 1.8500 1.00 4211 197 0.1757 0.2008 REMARK 3 17 1.8500 - 1.8100 1.00 4185 221 0.1753 0.2005 REMARK 3 18 1.8100 - 1.7800 1.00 4172 242 0.1781 0.1958 REMARK 3 19 1.7800 - 1.7500 1.00 4173 229 0.1843 0.2198 REMARK 3 20 1.7500 - 1.7200 1.00 4196 246 0.1780 0.2105 REMARK 3 21 1.7200 - 1.6900 1.00 4164 231 0.1815 0.1918 REMARK 3 22 1.6900 - 1.6600 1.00 4141 221 0.1854 0.2152 REMARK 3 23 1.6600 - 1.6400 1.00 4246 204 0.1988 0.2492 REMARK 3 24 1.6400 - 1.6200 1.00 4207 206 0.1969 0.2258 REMARK 3 25 1.6200 - 1.5900 1.00 4136 226 0.2021 0.2266 REMARK 3 26 1.5900 - 1.5700 1.00 4232 199 0.2118 0.2323 REMARK 3 27 1.5700 - 1.5500 1.00 4245 179 0.2148 0.2183 REMARK 3 28 1.5500 - 1.5300 1.00 4132 211 0.2321 0.2467 REMARK 3 29 1.5300 - 1.5200 1.00 4192 242 0.2520 0.2664 REMARK 3 30 1.5200 - 1.5000 1.00 4169 209 0.2702 0.2832 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.145 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.455 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 6210 REMARK 3 ANGLE : 1.654 8376 REMARK 3 CHIRALITY : 0.093 939 REMARK 3 PLANARITY : 0.012 1108 REMARK 3 DIHEDRAL : 12.785 2295 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UQW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000264701. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133142 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 61.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3EN0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.6, 1.65 M AMMONIUM REMARK 280 SULFATE AND 4% FORMAMIDE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.04600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.04600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.23150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.47350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.23150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.47350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 82.04600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.23150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.47350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 82.04600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.23150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 66.47350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 132.94700 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 164.09200 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 132.94700 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 82.04600 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 82.04600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 LEU A 3 REMARK 465 ARG A 269 REMARK 465 VAL A 270 REMARK 465 GLU A 271 REMARK 465 ASN A 272 REMARK 465 LEU A 273 REMARK 465 TYR A 274 REMARK 465 PHE A 275 REMARK 465 GLN A 276 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 GLN B 6 REMARK 465 VAL B 270 REMARK 465 GLU B 271 REMARK 465 ASN B 272 REMARK 465 LEU B 273 REMARK 465 TYR B 274 REMARK 465 PHE B 275 REMARK 465 GLN B 276 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 LEU C 3 REMARK 465 SER C 4 REMARK 465 ARG C 269 REMARK 465 VAL C 270 REMARK 465 GLU C 271 REMARK 465 ASN C 272 REMARK 465 LEU C 273 REMARK 465 TYR C 274 REMARK 465 PHE C 275 REMARK 465 GLN C 276 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 475 O HOH A 515 2.02 REMARK 500 O HOH B 453 O HOH B 605 2.14 REMARK 500 OD1 ASP B 75 O HOH B 401 2.15 REMARK 500 O HOH B 599 O HOH C 415 2.15 REMARK 500 O HOH B 512 O HOH B 513 2.15 REMARK 500 O HOH B 569 O HOH B 620 2.17 REMARK 500 O HOH B 536 O HOH B 563 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 76 CG - CD - NE ANGL. DEV. = -13.4 DEGREES REMARK 500 ARG C 249 CG - CD - NE ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 20 -121.98 -92.44 REMARK 500 DPP A 132 -115.03 60.44 REMARK 500 PHE A 175 -70.98 -64.29 REMARK 500 HIS B 20 -120.57 -92.41 REMARK 500 DPP B 132 -115.84 60.89 REMARK 500 HIS C 20 -119.36 -92.16 REMARK 500 DPP C 132 -116.27 59.87 REMARK 500 ASN C 247 44.46 70.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 7ID A 301 DBREF 7UQW A 1 270 UNP P73832 CPHB_SYNY3 1 270 DBREF 7UQW B 1 270 UNP P73832 CPHB_SYNY3 1 270 DBREF 7UQW C 1 270 UNP P73832 CPHB_SYNY3 1 270 SEQADV 7UQW DPP A 132 UNP P73832 SER 132 ENGINEERED MUTATION SEQADV 7UQW GLU A 271 UNP P73832 EXPRESSION TAG SEQADV 7UQW ASN A 272 UNP P73832 EXPRESSION TAG SEQADV 7UQW LEU A 273 UNP P73832 EXPRESSION TAG SEQADV 7UQW TYR A 274 UNP P73832 EXPRESSION TAG SEQADV 7UQW PHE A 275 UNP P73832 EXPRESSION TAG SEQADV 7UQW GLN A 276 UNP P73832 EXPRESSION TAG SEQADV 7UQW DPP B 132 UNP P73832 SER 132 ENGINEERED MUTATION SEQADV 7UQW GLU B 271 UNP P73832 EXPRESSION TAG SEQADV 7UQW ASN B 272 UNP P73832 EXPRESSION TAG SEQADV 7UQW LEU B 273 UNP P73832 EXPRESSION TAG SEQADV 7UQW TYR B 274 UNP P73832 EXPRESSION TAG SEQADV 7UQW PHE B 275 UNP P73832 EXPRESSION TAG SEQADV 7UQW GLN B 276 UNP P73832 EXPRESSION TAG SEQADV 7UQW DPP C 132 UNP P73832 SER 132 ENGINEERED MUTATION SEQADV 7UQW GLU C 271 UNP P73832 EXPRESSION TAG SEQADV 7UQW ASN C 272 UNP P73832 EXPRESSION TAG SEQADV 7UQW LEU C 273 UNP P73832 EXPRESSION TAG SEQADV 7UQW TYR C 274 UNP P73832 EXPRESSION TAG SEQADV 7UQW PHE C 275 UNP P73832 EXPRESSION TAG SEQADV 7UQW GLN C 276 UNP P73832 EXPRESSION TAG SEQRES 1 A 276 MET PRO LEU SER SER GLN PRO ALA ILE LEU ILE ILE GLY SEQRES 2 A 276 GLY ALA GLU ASP LYS VAL HIS GLY ARG GLU ILE LEU GLN SEQRES 3 A 276 THR PHE TRP SER ARG SER GLY GLY ASN ASP ALA ILE ILE SEQRES 4 A 276 GLY ILE ILE PRO SER ALA SER ARG GLU PRO LEU LEU ILE SEQRES 5 A 276 GLY GLU ARG TYR GLN THR ILE PHE SER ASP MET GLY VAL SEQRES 6 A 276 LYS GLU LEU LYS VAL LEU ASP ILE ARG ASP ARG ALA GLN SEQRES 7 A 276 GLY ASP ASP SER GLY TYR ARG LEU PHE VAL GLU GLN CYS SEQRES 8 A 276 THR GLY ILE PHE MET THR GLY GLY ASP GLN LEU ARG LEU SEQRES 9 A 276 CYS GLY LEU LEU ALA ASP THR PRO LEU MET ASP ARG ILE SEQRES 10 A 276 ARG GLN ARG VAL HIS ASN GLY GLU ILE SER LEU ALA GLY SEQRES 11 A 276 THR DPP ALA GLY ALA ALA VAL MET GLY HIS HIS MET ILE SEQRES 12 A 276 ALA GLY GLY SER SER GLY GLU TRP PRO ASN ARG ALA LEU SEQRES 13 A 276 VAL ASP MET ALA VAL GLY LEU GLY ILE VAL PRO GLU ILE SEQRES 14 A 276 VAL VAL ASP GLN HIS PHE HIS ASN ARG ASN ARG MET ALA SEQRES 15 A 276 ARG LEU LEU SER ALA ILE SER THR HIS PRO GLU LEU LEU SEQRES 16 A 276 GLY LEU GLY ILE ASP GLU ASP THR CYS ALA MET PHE GLU SEQRES 17 A 276 ARG ASP GLY SER VAL LYS VAL ILE GLY GLN GLY THR VAL SEQRES 18 A 276 SER PHE VAL ASP ALA ARG ASP MET SER TYR THR ASN ALA SEQRES 19 A 276 ALA LEU VAL GLY ALA ASN ALA PRO LEU SER LEU HIS ASN SEQRES 20 A 276 LEU ARG LEU ASN ILE LEU VAL HIS GLY GLU VAL TYR HIS SEQRES 21 A 276 GLN VAL LYS GLN ARG ALA PHE PRO ARG VAL GLU ASN LEU SEQRES 22 A 276 TYR PHE GLN SEQRES 1 B 276 MET PRO LEU SER SER GLN PRO ALA ILE LEU ILE ILE GLY SEQRES 2 B 276 GLY ALA GLU ASP LYS VAL HIS GLY ARG GLU ILE LEU GLN SEQRES 3 B 276 THR PHE TRP SER ARG SER GLY GLY ASN ASP ALA ILE ILE SEQRES 4 B 276 GLY ILE ILE PRO SER ALA SER ARG GLU PRO LEU LEU ILE SEQRES 5 B 276 GLY GLU ARG TYR GLN THR ILE PHE SER ASP MET GLY VAL SEQRES 6 B 276 LYS GLU LEU LYS VAL LEU ASP ILE ARG ASP ARG ALA GLN SEQRES 7 B 276 GLY ASP ASP SER GLY TYR ARG LEU PHE VAL GLU GLN CYS SEQRES 8 B 276 THR GLY ILE PHE MET THR GLY GLY ASP GLN LEU ARG LEU SEQRES 9 B 276 CYS GLY LEU LEU ALA ASP THR PRO LEU MET ASP ARG ILE SEQRES 10 B 276 ARG GLN ARG VAL HIS ASN GLY GLU ILE SER LEU ALA GLY SEQRES 11 B 276 THR DPP ALA GLY ALA ALA VAL MET GLY HIS HIS MET ILE SEQRES 12 B 276 ALA GLY GLY SER SER GLY GLU TRP PRO ASN ARG ALA LEU SEQRES 13 B 276 VAL ASP MET ALA VAL GLY LEU GLY ILE VAL PRO GLU ILE SEQRES 14 B 276 VAL VAL ASP GLN HIS PHE HIS ASN ARG ASN ARG MET ALA SEQRES 15 B 276 ARG LEU LEU SER ALA ILE SER THR HIS PRO GLU LEU LEU SEQRES 16 B 276 GLY LEU GLY ILE ASP GLU ASP THR CYS ALA MET PHE GLU SEQRES 17 B 276 ARG ASP GLY SER VAL LYS VAL ILE GLY GLN GLY THR VAL SEQRES 18 B 276 SER PHE VAL ASP ALA ARG ASP MET SER TYR THR ASN ALA SEQRES 19 B 276 ALA LEU VAL GLY ALA ASN ALA PRO LEU SER LEU HIS ASN SEQRES 20 B 276 LEU ARG LEU ASN ILE LEU VAL HIS GLY GLU VAL TYR HIS SEQRES 21 B 276 GLN VAL LYS GLN ARG ALA PHE PRO ARG VAL GLU ASN LEU SEQRES 22 B 276 TYR PHE GLN SEQRES 1 C 276 MET PRO LEU SER SER GLN PRO ALA ILE LEU ILE ILE GLY SEQRES 2 C 276 GLY ALA GLU ASP LYS VAL HIS GLY ARG GLU ILE LEU GLN SEQRES 3 C 276 THR PHE TRP SER ARG SER GLY GLY ASN ASP ALA ILE ILE SEQRES 4 C 276 GLY ILE ILE PRO SER ALA SER ARG GLU PRO LEU LEU ILE SEQRES 5 C 276 GLY GLU ARG TYR GLN THR ILE PHE SER ASP MET GLY VAL SEQRES 6 C 276 LYS GLU LEU LYS VAL LEU ASP ILE ARG ASP ARG ALA GLN SEQRES 7 C 276 GLY ASP ASP SER GLY TYR ARG LEU PHE VAL GLU GLN CYS SEQRES 8 C 276 THR GLY ILE PHE MET THR GLY GLY ASP GLN LEU ARG LEU SEQRES 9 C 276 CYS GLY LEU LEU ALA ASP THR PRO LEU MET ASP ARG ILE SEQRES 10 C 276 ARG GLN ARG VAL HIS ASN GLY GLU ILE SER LEU ALA GLY SEQRES 11 C 276 THR DPP ALA GLY ALA ALA VAL MET GLY HIS HIS MET ILE SEQRES 12 C 276 ALA GLY GLY SER SER GLY GLU TRP PRO ASN ARG ALA LEU SEQRES 13 C 276 VAL ASP MET ALA VAL GLY LEU GLY ILE VAL PRO GLU ILE SEQRES 14 C 276 VAL VAL ASP GLN HIS PHE HIS ASN ARG ASN ARG MET ALA SEQRES 15 C 276 ARG LEU LEU SER ALA ILE SER THR HIS PRO GLU LEU LEU SEQRES 16 C 276 GLY LEU GLY ILE ASP GLU ASP THR CYS ALA MET PHE GLU SEQRES 17 C 276 ARG ASP GLY SER VAL LYS VAL ILE GLY GLN GLY THR VAL SEQRES 18 C 276 SER PHE VAL ASP ALA ARG ASP MET SER TYR THR ASN ALA SEQRES 19 C 276 ALA LEU VAL GLY ALA ASN ALA PRO LEU SER LEU HIS ASN SEQRES 20 C 276 LEU ARG LEU ASN ILE LEU VAL HIS GLY GLU VAL TYR HIS SEQRES 21 C 276 GLN VAL LYS GLN ARG ALA PHE PRO ARG VAL GLU ASN LEU SEQRES 22 C 276 TYR PHE GLN HET DPP A 132 6 HET DPP B 132 6 HET DPP C 132 6 HET 7ID A 301 5 HET 7ID A 302 19 HET SO4 A 303 5 HET 7ID B 301 2 HET 7ID B 302 19 HET ARF B 303 3 HET ARF B 304 3 HET ARF B 305 3 HET ARF B 306 3 HET ARF B 307 3 HET 7ID C 301 2 HET 7ID C 302 19 HET ARF C 303 3 HET ARF C 304 3 HETNAM DPP DIAMINOPROPANOIC ACID HETNAM 7ID (2~{S})-4-[[(2~{S})-5-[[AZANYL($L^{4}-AZANYLIDENE) HETNAM 2 7ID METHYL]AMINO]-1-$L^{1}-OXIDANYL-1-OXIDANYLIDENE- HETNAM 3 7ID PENTAN-2-YL]AMINO]-2-$L^{2}-AZANYL-4-OXIDANYLIDENE- HETNAM 4 7ID BUTANOIC ACID HETNAM SO4 SULFATE ION HETNAM ARF FORMAMIDE FORMUL 1 DPP 3(C3 H8 N2 O2) FORMUL 4 7ID 6(C10 H19 N5 O5) FORMUL 6 SO4 O4 S 2- FORMUL 9 ARF 7(C H3 N O) FORMUL 18 HOH *539(H2 O) HELIX 1 AA1 ARG A 22 SER A 32 1 11 HELIX 2 AA2 GLY A 33 ASP A 36 5 4 HELIX 3 AA3 GLU A 48 GLY A 64 1 17 HELIX 4 AA4 ASP A 75 ASP A 80 5 6 HELIX 5 AA5 ASP A 81 CYS A 91 1 11 HELIX 6 AA6 ASP A 100 ALA A 109 1 10 HELIX 7 AA7 THR A 111 ASN A 123 1 13 HELIX 8 AA8 DPP A 132 VAL A 137 1 6 HELIX 9 AA9 ASN A 153 ALA A 155 5 3 HELIX 10 AB1 ARG A 180 HIS A 191 1 12 HELIX 11 AB2 ALA A 234 VAL A 237 5 4 HELIX 12 AB3 ARG B 22 SER B 32 1 11 HELIX 13 AB4 GLY B 33 ASP B 36 5 4 HELIX 14 AB5 GLU B 48 GLY B 64 1 17 HELIX 15 AB6 ASP B 75 ASP B 80 5 6 HELIX 16 AB7 ASP B 81 CYS B 91 1 11 HELIX 17 AB8 ASP B 100 ALA B 109 1 10 HELIX 18 AB9 THR B 111 ASN B 123 1 13 HELIX 19 AC1 DPP B 132 VAL B 137 1 6 HELIX 20 AC2 ASN B 153 ALA B 155 5 3 HELIX 21 AC3 ARG B 180 HIS B 191 1 12 HELIX 22 AC4 ALA B 234 VAL B 237 5 4 HELIX 23 AC5 ARG C 22 SER C 32 1 11 HELIX 24 AC6 GLY C 33 ASP C 36 5 4 HELIX 25 AC7 GLU C 48 GLY C 64 1 17 HELIX 26 AC8 ASP C 75 ASP C 80 5 6 HELIX 27 AC9 ASP C 81 CYS C 91 1 11 HELIX 28 AD1 ASP C 100 ALA C 109 1 10 HELIX 29 AD2 THR C 111 ASN C 123 1 13 HELIX 30 AD3 DPP C 132 VAL C 137 1 6 HELIX 31 AD4 ASN C 153 ALA C 155 5 3 HELIX 32 AD5 ARG C 180 HIS C 191 1 12 HELIX 33 AD6 ALA C 234 VAL C 237 5 4 SHEET 1 AA1 9 GLU A 67 VAL A 70 0 SHEET 2 AA1 9 ILE A 38 ILE A 42 1 N ILE A 41 O LYS A 69 SHEET 3 AA1 9 GLY A 93 MET A 96 1 O PHE A 95 N ILE A 42 SHEET 4 AA1 9 SER A 127 THR A 131 1 O ALA A 129 N MET A 96 SHEET 5 AA1 9 ILE A 9 ILE A 12 1 N ILE A 12 O GLY A 130 SHEET 6 AA1 9 THR A 203 PHE A 207 -1 O PHE A 207 N ILE A 9 SHEET 7 AA1 9 SER A 212 GLY A 217 -1 O LYS A 214 N MET A 206 SHEET 8 AA1 9 VAL A 258 HIS A 260 -1 O TYR A 259 N VAL A 213 SHEET 9 AA1 9 ARG A 265 PHE A 267 -1 O ARG A 265 N HIS A 260 SHEET 1 AA2 2 HIS A 141 GLY A 146 0 SHEET 2 AA2 2 VAL A 157 VAL A 161 -1 O ASP A 158 N ALA A 144 SHEET 1 AA3 8 ILE A 169 ASP A 172 0 SHEET 2 AA3 8 LEU A 195 ILE A 199 1 O LEU A 197 N ASP A 172 SHEET 3 AA3 8 VAL A 221 ASP A 225 -1 O VAL A 224 N GLY A 196 SHEET 4 AA3 8 LEU A 245 LEU A 253 -1 O ASN A 251 N PHE A 223 SHEET 5 AA3 8 LEU B 245 VAL B 254 -1 O ILE B 252 N LEU A 245 SHEET 6 AA3 8 THR B 220 ASP B 225 -1 N PHE B 223 O ASN B 251 SHEET 7 AA3 8 LEU B 195 ILE B 199 -1 N GLY B 196 O VAL B 224 SHEET 8 AA3 8 ILE B 169 ASP B 172 1 N ASP B 172 O LEU B 197 SHEET 1 AA4 4 TYR A 231 THR A 232 0 SHEET 2 AA4 4 LEU A 245 LEU A 253 -1 O HIS A 246 N TYR A 231 SHEET 3 AA4 4 LEU B 245 VAL B 254 -1 O ILE B 252 N LEU A 245 SHEET 4 AA4 4 TYR B 231 THR B 232 -1 N TYR B 231 O HIS B 246 SHEET 1 AA5 9 GLU B 67 VAL B 70 0 SHEET 2 AA5 9 ILE B 38 ILE B 42 1 N ILE B 41 O LYS B 69 SHEET 3 AA5 9 GLY B 93 MET B 96 1 O PHE B 95 N ILE B 42 SHEET 4 AA5 9 SER B 127 THR B 131 1 O ALA B 129 N MET B 96 SHEET 5 AA5 9 ALA B 8 ILE B 12 1 N ILE B 12 O GLY B 130 SHEET 6 AA5 9 THR B 203 GLU B 208 -1 O PHE B 207 N ILE B 9 SHEET 7 AA5 9 SER B 212 GLY B 217 -1 O SER B 212 N GLU B 208 SHEET 8 AA5 9 VAL B 258 HIS B 260 -1 O TYR B 259 N VAL B 213 SHEET 9 AA5 9 ARG B 265 PHE B 267 -1 O ARG B 265 N HIS B 260 SHEET 1 AA6 2 HIS B 141 GLY B 146 0 SHEET 2 AA6 2 VAL B 157 VAL B 161 -1 O ASP B 158 N ALA B 144 SHEET 1 AA7 9 GLU C 67 VAL C 70 0 SHEET 2 AA7 9 ILE C 38 ILE C 42 1 N ILE C 41 O LYS C 69 SHEET 3 AA7 9 GLY C 93 MET C 96 1 O PHE C 95 N ILE C 42 SHEET 4 AA7 9 SER C 127 THR C 131 1 O ALA C 129 N MET C 96 SHEET 5 AA7 9 ILE C 9 ILE C 12 1 N ILE C 12 O GLY C 130 SHEET 6 AA7 9 THR C 203 PHE C 207 -1 O PHE C 207 N ILE C 9 SHEET 7 AA7 9 SER C 212 GLY C 217 -1 O LYS C 214 N MET C 206 SHEET 8 AA7 9 VAL C 258 HIS C 260 -1 O TYR C 259 N VAL C 213 SHEET 9 AA7 9 ARG C 265 PHE C 267 -1 O ARG C 265 N HIS C 260 SHEET 1 AA8 2 HIS C 141 GLY C 146 0 SHEET 2 AA8 2 VAL C 157 VAL C 161 -1 O ASP C 158 N ALA C 144 SHEET 1 AA9 4 ILE C 169 ASP C 172 0 SHEET 2 AA9 4 LEU C 195 ILE C 199 1 O LEU C 197 N ASP C 172 SHEET 3 AA9 4 VAL C 221 ASP C 225 -1 O VAL C 224 N GLY C 196 SHEET 4 AA9 4 ARG C 249 LEU C 253 -1 O ASN C 251 N PHE C 223 SHEET 1 AB1 2 TYR C 231 THR C 232 0 SHEET 2 AB1 2 LEU C 245 HIS C 246 -1 O HIS C 246 N TYR C 231 LINK C THR A 131 N DPP A 132 1555 1555 1.32 LINK C DPP A 132 N ALA A 133 1555 1555 1.32 LINK NG DPP A 132 C 7ID A 302 1555 1555 1.33 LINK CO2 7ID A 301 N 7ID A 302 1555 1555 1.33 LINK C THR B 131 N DPP B 132 1555 1555 1.32 LINK C DPP B 132 N ALA B 133 1555 1555 1.34 LINK NG DPP B 132 C 7ID B 302 1555 1555 1.34 LINK CO2 7ID B 301 N 7ID B 302 1555 1555 1.33 LINK C THR C 131 N DPP C 132 1555 1555 1.32 LINK C DPP C 132 N ALA C 133 1555 1555 1.34 LINK NG DPP C 132 C 7ID C 302 1555 1555 1.33 LINK CO2 7ID C 301 N 7ID C 302 1555 1555 1.34 CRYST1 76.463 132.947 164.092 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013078 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007522 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006094 0.00000