HEADER IMMUNE SYSTEM 26-APR-22 7UT3 TITLE CRYSTAL STRUCTURE OF COMPLEX OF FAB, G10C WITH GALNAC-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB PROTEIN HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: G10C LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: SAPIENTIA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 2661779; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_COMMON: MOUSE; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: SAPIENTIA; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 2661779 KEYWDS FAB, GALNAC-PNP, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.LI,A.WLODAWER REVDAT 3 18-OCT-23 7UT3 1 REMARK REVDAT 2 28-SEP-22 7UT3 1 JRNL REVDAT 1 21-SEP-22 7UT3 0 JRNL AUTH L.XIA,T.R.BELLOMO,R.GIBADULLIN,M.D.CONGDON,E.F.EDMONDSON, JRNL AUTH 2 M.LI,A.WLODAWER,C.LI,J.S.TEMME,P.PATEL,D.BUTCHER, JRNL AUTH 3 J.C.GILDERSLEEVE JRNL TITL DEVELOPMENT OF A GALNAC-TYROSINE-SPECIFIC MONOCLONAL JRNL TITL 2 ANTIBODY AND DETECTION OF TYROSINE O -GALNACYLATION IN JRNL TITL 3 NUMEROUS HUMAN TISSUES AND CELL LINES. JRNL REF J.AM.CHEM.SOC. V. 144 16410 2022 JRNL REFN ESSN 1520-5126 JRNL PMID 36054098 JRNL DOI 10.1021/JACS.2C04477 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.6 REMARK 3 NUMBER OF REFLECTIONS : 14099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.000 REMARK 3 FREE R VALUE TEST SET COUNT : 587 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 296 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 23.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3276 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 89.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 1.45000 REMARK 3 B12 (A**2) : -0.22000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.383 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.273 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 34.769 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3400 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3069 ; 0.002 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4633 ; 1.344 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7114 ; 1.094 ; 1.754 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 427 ; 8.201 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;34.597 ;23.385 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 539 ;21.628 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.075 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 465 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3811 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 748 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6469 ; 6.547 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 109 REMARK 3 ORIGIN FOR THE GROUP (A): 8.5827 44.8269 98.1389 REMARK 3 T TENSOR REMARK 3 T11: 0.2536 T22: 0.2356 REMARK 3 T33: 0.1705 T12: -0.0095 REMARK 3 T13: 0.0283 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 2.2864 L22: 2.6352 REMARK 3 L33: 3.1340 L12: -0.9892 REMARK 3 L13: 0.3288 L23: -0.5292 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.2713 S13: 0.4821 REMARK 3 S21: -0.1769 S22: 0.1145 S23: 0.1030 REMARK 3 S31: -0.5216 S32: -0.2761 S33: -0.1173 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 0 H 0 REMARK 3 ORIGIN FOR THE GROUP (A): 22.2936 48.1523 63.5858 REMARK 3 T TENSOR REMARK 3 T11: 0.3711 T22: 0.4585 REMARK 3 T33: 0.3438 T12: -0.0135 REMARK 3 T13: -0.1024 T23: 0.0826 REMARK 3 L TENSOR REMARK 3 L11: 1.9156 L22: 0.9710 REMARK 3 L33: 0.8715 L12: -0.9574 REMARK 3 L13: 0.6225 L23: -0.8769 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: 0.3078 S13: -0.0893 REMARK 3 S21: -0.3827 S22: -0.0114 S23: 0.0842 REMARK 3 S31: 0.4469 S32: 0.0290 S33: 0.0171 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 0 H 0 REMARK 3 ORIGIN FOR THE GROUP (A): 28.7063 34.6070 94.5548 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.1432 REMARK 3 T33: 0.0698 T12: -0.0431 REMARK 3 T13: 0.0459 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.2755 L22: 1.1341 REMARK 3 L33: 1.5026 L12: -0.3380 REMARK 3 L13: 0.1504 L23: 0.0820 REMARK 3 S TENSOR REMARK 3 S11: 0.0421 S12: 0.2276 S13: 0.0669 REMARK 3 S21: -0.2014 S22: 0.0333 S23: -0.1344 REMARK 3 S31: -0.0497 S32: 0.3177 S33: -0.0754 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 0 H 0 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0000 0.0000 0.0000 REMARK 3 T TENSOR REMARK 3 T11: 0.1759 T22: 0.1759 REMARK 3 T33: 0.1759 T12: 0.0000 REMARK 3 T13: 0.0000 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7UT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000264819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18216 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.80000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Z7X, 1SY6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM PHOSPHATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.35133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.70267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.52700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 140.87833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.17567 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.35133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 112.70267 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 140.87833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 84.52700 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.17567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C TRS H 601 LIES ON A SPECIAL POSITION. REMARK 375 N TRS H 601 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN L 1 REMARK 465 CYS L 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG H 217 C ARG H 217 O 0.174 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU H 18 140.19 -170.13 REMARK 500 ASN H 76 92.30 16.93 REMARK 500 SER H 84 81.52 55.64 REMARK 500 THR H 120 87.69 -50.19 REMARK 500 THR H 135 48.73 36.41 REMARK 500 THR H 136 40.97 -99.38 REMARK 500 SER H 162 -71.93 -37.44 REMARK 500 ALA H 172 131.26 -29.62 REMARK 500 SER H 176 79.84 -168.84 REMARK 500 VAL H 185 136.24 -175.20 REMARK 500 SER H 194 -76.73 -56.40 REMARK 500 GLN H 195 92.93 -69.86 REMARK 500 PRO H 216 -81.98 -58.70 REMARK 500 SER L 26 -49.58 -27.97 REMARK 500 TRP L 46 -65.09 -127.92 REMARK 500 THR L 50 -45.87 73.82 REMARK 500 SER L 66 142.02 -175.00 REMARK 500 GLU L 67 -85.86 54.88 REMARK 500 MET L 77 139.29 -37.54 REMARK 500 TYR L 93 127.02 -39.23 REMARK 500 PRO L 118 140.95 -34.20 REMARK 500 ASN L 136 68.82 71.15 REMARK 500 GLU L 152 99.26 -65.40 REMARK 500 LYS L 167 -74.81 -74.98 REMARK 500 LEU L 179 -168.78 -101.13 REMARK 500 ASN L 188 -68.17 -130.59 REMARK 500 ARG L 209 -133.11 40.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 7UT3 H 1 217 PDB 7UT3 7UT3 1 217 DBREF 7UT3 L 1 212 PDB 7UT3 7UT3 1 212 SEQRES 1 H 217 GLU VAL LYS LEU VAL GLU SER GLY GLY VAL LEU VAL LYS SEQRES 2 H 217 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 217 PHE THR PHE ARG ASN TYR ASP MET SER TRP VAL ARG GLN SEQRES 4 H 217 THR PRO GLU LYS ARG LEU GLU TRP VAL ALA SER ILE SER SEQRES 5 H 217 GLY GLY TYR THR THR TYR TYR PRO ASP ILE MET ARG GLY SEQRES 6 H 217 ARG PHE THR ILE SER ARG ASP ASN VAL ARG ASN ILE LEU SEQRES 7 H 217 TYR LEU GLU MET ARG SER LEU ARG SER GLU ASP THR ALA SEQRES 8 H 217 MET TYR TYR CYS ALA ARG ASN TYR GLY HIS ASP ALA MET SEQRES 9 H 217 ASP TYR TRP GLY GLN GLY THR SER VAL THR VAL SER SER SEQRES 10 H 217 ALA LYS THR THR ALA PRO SER VAL TYR PRO LEU ALA PRO SEQRES 11 H 217 VAL CYS GLY ASP THR THR GLY SER SER VAL THR LEU GLY SEQRES 12 H 217 CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR LEU SEQRES 13 H 217 THR TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR SEQRES 14 H 217 PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SER SEQRES 15 H 217 SER SER VAL THR VAL THR SER SER THR TRP PRO SER GLN SEQRES 16 H 217 SER ILE THR CYS ASN VAL ALA HIS PRO ALA SER SER THR SEQRES 17 H 217 LYS VAL ASP LYS LYS ILE GLU PRO ARG SEQRES 1 L 212 GLN ILE VAL LEU THR GLN SER PRO ALA ILE MET SER ALA SEQRES 2 L 212 SER PRO GLY GLU LYS VAL THR LEU THR CYS SER ALA SER SEQRES 3 L 212 SER GLY ILE GLY PHE ILE HIS TRP TYR GLN GLN LYS PRO SEQRES 4 L 212 GLY THR SER PRO LYS ARG TRP ILE TYR ASP THR SER ILE SEQRES 5 L 212 LEU ALA SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 6 L 212 SER GLU THR SER TYR SER LEU THR ILE THR ILE MET GLU SEQRES 7 L 212 ALA GLU ASP ALA ALA THR TYR TYR CYS HIS GLN ARG SER SEQRES 8 L 212 SER TYR PRO THR PHE GLY GLY GLY THR LYS LEU GLU ILE SEQRES 9 L 212 LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE PRO SEQRES 10 L 212 PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SER VAL SEQRES 11 L 212 VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP ILE ASN SEQRES 12 L 212 VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN GLY SEQRES 13 L 212 VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SER SEQRES 14 L 212 THR TYR SER MET SER SER THR LEU THR LEU THR LYS ASP SEQRES 15 L 212 GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA THR SEQRES 16 L 212 HIS LYS THR SER THR SER PRO ILE VAL LYS SER PHE ASN SEQRES 17 L 212 ARG ASN GLU CYS HET TRS H 601 8 HET TI0 L 301 24 HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM TI0 4-NITROPHENYL 2-ACETAMIDO-2-DEOXY-ALPHA-D- HETNAM 2 TI0 GALACTOPYRANOSIDE HETSYN TRS TRIS BUFFER FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 TI0 C14 H18 N2 O8 FORMUL 5 HOH *57(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 ARG H 86 THR H 90 5 5 HELIX 3 AA3 SER H 160 SER H 162 5 3 HELIX 4 AA4 GLU L 78 ALA L 82 5 5 HELIX 5 AA5 SER L 119 GLY L 126 1 8 HELIX 6 AA6 THR L 180 GLU L 185 1 6 SHEET 1 AA1 4 LYS H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 25 N LYS H 3 SHEET 3 AA1 4 ILE H 77 MET H 82 -1 O LEU H 78 N CYS H 22 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA2 5 THR H 57 TYR H 58 0 SHEET 2 AA2 5 LEU H 45 ILE H 51 -1 N SER H 50 O TYR H 58 SHEET 3 AA2 5 ASP H 33 GLN H 39 -1 N MET H 34 O ILE H 51 SHEET 4 AA2 5 ALA H 91 ASN H 98 -1 O TYR H 94 N VAL H 37 SHEET 5 AA2 5 TYR H 106 TRP H 107 -1 O TYR H 106 N ARG H 97 SHEET 1 AA3 5 THR H 57 TYR H 58 0 SHEET 2 AA3 5 LEU H 45 ILE H 51 -1 N SER H 50 O TYR H 58 SHEET 3 AA3 5 ASP H 33 GLN H 39 -1 N MET H 34 O ILE H 51 SHEET 4 AA3 5 ALA H 91 ASN H 98 -1 O TYR H 94 N VAL H 37 SHEET 5 AA3 5 THR H 111 VAL H 113 -1 O THR H 111 N TYR H 93 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 SER H 139 TYR H 149 -1 O LEU H 145 N TYR H 126 SHEET 3 AA4 4 TYR H 179 THR H 188 -1 O LEU H 181 N VAL H 146 SHEET 4 AA4 4 HIS H 168 THR H 169 -1 N HIS H 168 O SER H 184 SHEET 1 AA5 4 SER H 124 LEU H 128 0 SHEET 2 AA5 4 SER H 139 TYR H 149 -1 O LEU H 145 N TYR H 126 SHEET 3 AA5 4 TYR H 179 THR H 188 -1 O LEU H 181 N VAL H 146 SHEET 4 AA5 4 VAL H 173 LEU H 174 -1 N VAL H 173 O THR H 180 SHEET 1 AA6 3 THR H 155 TRP H 158 0 SHEET 2 AA6 3 THR H 198 ALA H 202 -1 O ALA H 202 N THR H 155 SHEET 3 AA6 3 ASP H 211 LYS H 213 -1 O LYS H 212 N CYS H 199 SHEET 1 AA7 4 LEU L 4 THR L 5 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O SER L 24 N THR L 5 SHEET 3 AA7 4 SER L 69 ILE L 74 -1 O LEU L 72 N LEU L 21 SHEET 4 AA7 4 PHE L 61 SER L 66 -1 N SER L 64 O SER L 71 SHEET 1 AA8 6 ILE L 10 ALA L 13 0 SHEET 2 AA8 6 THR L 100 ILE L 104 1 O LYS L 101 N MET L 11 SHEET 3 AA8 6 THR L 84 GLN L 89 -1 N TYR L 85 O THR L 100 SHEET 4 AA8 6 HIS L 33 GLN L 37 -1 N GLN L 37 O THR L 84 SHEET 5 AA8 6 LYS L 44 TYR L 48 -1 O ILE L 47 N TRP L 34 SHEET 6 AA8 6 ILE L 52 LEU L 53 -1 O ILE L 52 N TYR L 48 SHEET 1 AA9 4 ILE L 10 ALA L 13 0 SHEET 2 AA9 4 THR L 100 ILE L 104 1 O LYS L 101 N MET L 11 SHEET 3 AA9 4 THR L 84 GLN L 89 -1 N TYR L 85 O THR L 100 SHEET 4 AA9 4 THR L 95 PHE L 96 -1 O THR L 95 N GLN L 89 SHEET 1 AB1 4 ILE L 115 PHE L 116 0 SHEET 2 AB1 4 SER L 129 PHE L 137 -1 O VAL L 131 N PHE L 116 SHEET 3 AB1 4 TYR L 171 THR L 178 -1 O TYR L 171 N PHE L 137 SHEET 4 AB1 4 VAL L 157 TRP L 161 -1 N LEU L 158 O THR L 176 SHEET 1 AB2 3 ASN L 143 ILE L 148 0 SHEET 2 AB2 3 SER L 189 THR L 195 -1 O GLU L 193 N LYS L 145 SHEET 3 AB2 3 PHE L 207 ASN L 208 -1 O PHE L 207 N TYR L 190 SSBOND 1 CYS H 22 CYS H 95 1555 1555 2.06 SSBOND 2 CYS H 144 CYS H 199 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 87 1555 1555 2.08 SSBOND 4 CYS L 132 CYS L 192 1555 1555 2.03 CISPEP 1 PHE H 150 PRO H 151 0 -2.14 CISPEP 2 GLU H 152 PRO H 153 0 -5.58 CISPEP 3 TRP H 192 PRO H 193 0 9.23 CISPEP 4 SER L 7 PRO L 8 0 -15.29 CISPEP 5 TYR L 138 PRO L 139 0 7.26 CRYST1 132.594 132.594 169.054 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007542 0.004354 0.000000 0.00000 SCALE2 0.000000 0.008709 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005915 0.00000