HEADER DNA BINDING PROTEIN/DNA 06-MAY-22 7UYN TITLE CRYSTAL STRUCTURE OF B-FORM ALIEN DNA 5'-CTTBPPBBSSZZSAAG IN A HOST- TITLE 2 GUEST COMPLEX WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA TITLE 3 VIRUS REVERSE TRANSCRIPTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSE TRANSCRIPTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL FRAGMENT (UNP RESIDUES 683-937); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*CP*TP*TP*(IGU)P*(1WA)P*(1WA)P*(IGU)P*(IGU))-3'); COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(P*(JSP)P*(JSP)P*(1W5)P*(1W5)P*(JSP)P*AP*AP*G)- COMPND 12 3'); COMPND 13 CHAIN: G; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOLONEY MURINE LEUKEMIA VIRUS; SOURCE 3 ORGANISM_TAXID: 11801; SOURCE 4 GENE: GAG-PRO-POL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS UNNATURAL DNA, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.M.GEORGIADIS REVDAT 2 25-OCT-23 7UYN 1 JRNL REVDAT 1 10-MAY-23 7UYN 0 JRNL AUTH M.S.SHUKLA,S.HOSHIKA,S.A.BENNER,M.M.GEORGIADIS JRNL TITL CRYSTAL STRUCTURES OF 'ALTERNATIVE ISOINFORMATIONAL JRNL TITL 2 ENGINEERED' DNA IN B-FORM. JRNL REF PHILOS.TRANS.R.SOC.LOND.B V. 378 20028 2023 JRNL REF 2 BIOL.SCI. JRNL REFN ESSN 1471-2970 JRNL PMID 36633282 JRNL DOI 10.1098/RSTB.2022.0028 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 46128 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.4600 - 4.1600 1.00 2959 148 0.1935 0.2007 REMARK 3 2 4.1500 - 3.3000 1.00 2788 162 0.2039 0.2173 REMARK 3 3 3.3000 - 2.8800 1.00 2753 149 0.2367 0.2744 REMARK 3 4 2.8800 - 2.6200 1.00 2767 136 0.2421 0.2927 REMARK 3 5 2.6200 - 2.4300 1.00 2753 148 0.2249 0.2310 REMARK 3 6 2.4300 - 2.2900 1.00 2731 146 0.2218 0.2856 REMARK 3 7 2.2900 - 2.1700 1.00 2731 129 0.2189 0.2423 REMARK 3 8 2.1700 - 2.0800 1.00 2735 134 0.2236 0.2603 REMARK 3 9 2.0800 - 2.0000 1.00 2729 124 0.2357 0.2751 REMARK 3 10 2.0000 - 1.9300 1.00 2714 131 0.2272 0.2691 REMARK 3 11 1.9300 - 1.8700 1.00 2731 121 0.2339 0.2231 REMARK 3 12 1.8700 - 1.8200 1.00 2710 125 0.2480 0.3098 REMARK 3 13 1.8200 - 1.7700 1.00 2708 144 0.2487 0.2992 REMARK 3 14 1.7700 - 1.7300 1.00 2688 141 0.2778 0.3057 REMARK 3 15 1.7300 - 1.6900 1.00 2699 158 0.3042 0.3142 REMARK 3 16 1.6900 - 1.6500 1.00 2719 117 0.3588 0.3719 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7UYN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265196. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46199 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 73.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.60 REMARK 200 R MERGE FOR SHELL (I) : 1.33900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6MIK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M ADA, PH 6.5, 9% PEG4000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.42700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.24000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.42700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.24000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -54.85400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 292.96000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 391 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 HIS A 22 REMARK 465 MET A 23 REMARK 465 LYS A 102 REMARK 465 LYS A 103 REMARK 465 PRO A 104 REMARK 465 GLY A 105 REMARK 465 THR A 106 REMARK 465 ASN A 107 REMARK 465 ASP A 108 REMARK 465 LEU A 279 REMARK 465 THR A 280 REMARK 465 ARG A 281 REMARK 465 GLY A 282 REMARK 465 SER A 283 REMARK 465 GLY A 284 REMARK 465 CYS A 285 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 41 114.82 -167.71 REMARK 500 VAL A 223 -106.68 54.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 452 DISTANCE = 5.97 ANGSTROMS DBREF 7UYN A 24 278 UNP Q8UN00 Q8UN00_MLVMO 683 937 DBREF 7UYN B 1 8 PDB 7UYN 7UYN 1 8 DBREF 7UYN G 9 16 PDB 7UYN 7UYN 9 16 SEQADV 7UYN GLY A 20 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN SER A 21 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN HIS A 22 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN MET A 23 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN ASN A 249 UNP Q8UN00 ASP 908 CONFLICT SEQADV 7UYN LEU A 279 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN THR A 280 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN ARG A 281 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN GLY A 282 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN SER A 283 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN GLY A 284 UNP Q8UN00 EXPRESSION TAG SEQADV 7UYN CYS A 285 UNP Q8UN00 EXPRESSION TAG SEQRES 1 A 266 GLY SER HIS MET THR TRP LEU SER ASP PHE PRO GLN ALA SEQRES 2 A 266 TRP ALA GLU THR GLY GLY MET GLY LEU ALA VAL ARG GLN SEQRES 3 A 266 ALA PRO LEU ILE ILE PRO LEU LYS ALA THR SER THR PRO SEQRES 4 A 266 VAL SER ILE LYS GLN TYR PRO MET SER GLN GLU ALA ARG SEQRES 5 A 266 LEU GLY ILE LYS PRO HIS ILE GLN ARG LEU LEU ASP GLN SEQRES 6 A 266 GLY ILE LEU VAL PRO CYS GLN SER PRO TRP ASN THR PRO SEQRES 7 A 266 LEU LEU PRO VAL LYS LYS PRO GLY THR ASN ASP TYR ARG SEQRES 8 A 266 PRO VAL GLN ASP LEU ARG GLU VAL ASN LYS ARG VAL GLU SEQRES 9 A 266 ASP ILE HIS PRO THR VAL PRO ASN PRO TYR ASN LEU LEU SEQRES 10 A 266 SER GLY LEU PRO PRO SER HIS GLN TRP TYR THR VAL LEU SEQRES 11 A 266 ASP LEU LYS ASP ALA PHE PHE CYS LEU ARG LEU HIS PRO SEQRES 12 A 266 THR SER GLN PRO LEU PHE ALA PHE GLU TRP ARG ASP PRO SEQRES 13 A 266 GLU MET GLY ILE SER GLY GLN LEU THR TRP THR ARG LEU SEQRES 14 A 266 PRO GLN GLY PHE LYS ASN SER PRO THR LEU PHE ASP GLU SEQRES 15 A 266 ALA LEU HIS ARG ASP LEU ALA ASP PHE ARG ILE GLN HIS SEQRES 16 A 266 PRO ASP LEU ILE LEU LEU GLN TYR VAL ASP ASP LEU LEU SEQRES 17 A 266 LEU ALA ALA THR SER GLU LEU ASP CYS GLN GLN GLY THR SEQRES 18 A 266 ARG ALA LEU LEU GLN THR LEU GLY ASN LEU GLY TYR ARG SEQRES 19 A 266 ALA SER ALA LYS LYS ALA GLN ILE CYS GLN LYS GLN VAL SEQRES 20 A 266 LYS TYR LEU GLY TYR LEU LEU LYS GLU GLY GLN ARG LEU SEQRES 21 A 266 THR ARG GLY SER GLY CYS SEQRES 1 B 8 DC DT DT IGU 1WA 1WA IGU IGU SEQRES 1 G 8 JSP JSP 1W5 1W5 JSP DA DA DG HET IGU B 4 22 HET 1WA B 5 22 HET 1WA B 6 22 HET IGU B 7 22 HET IGU B 8 22 HET JSP G 9 20 HET JSP G 10 20 HET 1W5 G 11 22 HET 1W5 G 12 22 HET JSP G 13 20 HETNAM IGU 2'-DEOXYISOGUANINE-5'-MONOPHOSPHATE HETNAM 1WA 2-AMINO-8-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO- HETNAM 2 1WA PENTOFURANOSYL)-4-HYDROXY-1H-IMIDAZO[1,2-A][1,3, HETNAM 3 1WA 5]TRIAZINE-5,8-DIIUM HETNAM JSP (1R)-1-(4-AMINO-1-METHYL-2-OXO-1,2-DIHYDROPYRIMIDIN-5- HETNAM 2 JSP YL)-1,4-ANHYDRO-2-DEOXY-5-O-PHOSPHONO-D-ERYTHRO- HETNAM 3 JSP PENTITOL HETNAM 1W5 (1R)-1-(6-AMINO-2-HYDROXY-5-NITROPYRIDIN-3-YL)-1,4- HETNAM 2 1W5 ANHYDRO-2-DEOXY-5-O-PHOSPHONO-D-ERYTHRO-PENTITOL FORMUL 2 IGU 3(C10 H14 N5 O7 P) FORMUL 2 1WA 2(C10 H16 N5 O7 P 2+) FORMUL 3 JSP 3(C10 H16 N3 O7 P) FORMUL 3 1W5 2(C10 H14 N3 O9 P) FORMUL 4 HOH *154(H2 O) HELIX 1 AA1 THR A 24 PHE A 29 1 6 HELIX 2 AA2 TRP A 33 GLY A 38 1 6 HELIX 3 AA3 SER A 67 GLN A 84 1 18 HELIX 4 AA4 LEU A 115 LYS A 120 1 6 HELIX 5 AA5 ASN A 131 GLY A 138 1 8 HELIX 6 AA6 ALA A 154 LEU A 158 5 5 HELIX 7 AA7 SER A 164 ALA A 169 5 6 HELIX 8 AA8 ASN A 194 HIS A 214 1 21 HELIX 9 AA9 SER A 232 GLY A 251 1 20 SHEET 1 AA1 3 LEU A 87 CYS A 90 0 SHEET 2 AA1 3 SER A 180 TRP A 185 -1 O THR A 184 N VAL A 88 SHEET 3 AA1 3 PHE A 170 ARG A 173 -1 N TRP A 172 O GLY A 181 SHEET 1 AA2 4 ILE A 218 TYR A 222 0 SHEET 2 AA2 4 ASP A 225 ALA A 230 -1 O LEU A 227 N LEU A 220 SHEET 3 AA2 4 TRP A 145 ASP A 150 -1 N THR A 147 O LEU A 228 SHEET 4 AA2 4 GLN A 260 GLN A 263 -1 O GLN A 263 N TYR A 146 SHEET 1 AA3 2 GLN A 265 TYR A 268 0 SHEET 2 AA3 2 TYR A 271 LYS A 274 -1 O LEU A 273 N VAL A 266 LINK O3' DT B 3 P IGU B 4 1555 1555 1.60 LINK O3' IGU B 4 P 1WA B 5 1555 1555 1.61 LINK O3' 1WA B 5 P 1WA B 6 1555 1555 1.61 LINK O3' 1WA B 6 P IGU B 7 1555 1555 1.61 LINK O3' IGU B 7 P IGU B 8 1555 1555 1.61 LINK O3' IGU B 8 P JSP G 9 1555 2475 1.56 LINK O3' JSP G 9 P JSP G 10 1555 1555 1.61 LINK O3' JSP G 10 P 1W5 G 11 1555 1555 1.61 LINK O3' 1W5 G 11 P 1W5 G 12 1555 1555 1.61 LINK O3' 1W5 G 12 P JSP G 13 1555 1555 1.61 LINK O3' JSP G 13 P DA G 14 1555 1555 1.61 CRYST1 54.854 146.480 46.656 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018230 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021433 0.00000 CONECT 2034 2046 CONECT 2046 2034 2047 2048 2049 CONECT 2047 2046 CONECT 2048 2046 CONECT 2049 2046 2050 CONECT 2050 2049 2051 CONECT 2051 2050 2052 2053 CONECT 2052 2051 2056 CONECT 2053 2051 2054 2055 CONECT 2054 2053 2068 CONECT 2055 2053 2056 CONECT 2056 2052 2055 2057 CONECT 2057 2056 2058 2067 CONECT 2058 2057 2059 CONECT 2059 2058 2062 CONECT 2060 2061 2062 2063 CONECT 2061 2060 CONECT 2062 2059 2060 2067 CONECT 2063 2060 2064 CONECT 2064 2063 2065 2066 CONECT 2065 2064 CONECT 2066 2064 2067 CONECT 2067 2057 2062 2066 CONECT 2068 2054 2087 2088 2089 CONECT 2069 2070 2075 CONECT 2070 2069 2071 2072 CONECT 2071 2070 CONECT 2072 2070 2073 CONECT 2073 2072 2074 2079 CONECT 2074 2073 2075 2077 CONECT 2075 2069 2074 2076 CONECT 2076 2075 CONECT 2077 2074 2078 CONECT 2078 2077 2079 CONECT 2079 2073 2078 2080 CONECT 2080 2079 2081 2085 CONECT 2081 2080 2082 CONECT 2082 2081 2083 2084 CONECT 2083 2082 2090 CONECT 2084 2082 2085 2086 CONECT 2085 2080 2084 CONECT 2086 2084 2087 CONECT 2087 2068 2086 CONECT 2088 2068 CONECT 2089 2068 CONECT 2090 2083 2109 2110 2111 CONECT 2091 2092 2097 CONECT 2092 2091 2093 2094 CONECT 2093 2092 CONECT 2094 2092 2095 CONECT 2095 2094 2096 2101 CONECT 2096 2095 2097 2099 CONECT 2097 2091 2096 2098 CONECT 2098 2097 CONECT 2099 2096 2100 CONECT 2100 2099 2101 CONECT 2101 2095 2100 2102 CONECT 2102 2101 2103 2107 CONECT 2103 2102 2104 CONECT 2104 2103 2105 2106 CONECT 2105 2104 2112 CONECT 2106 2104 2107 2108 CONECT 2107 2102 2106 CONECT 2108 2106 2109 CONECT 2109 2090 2108 CONECT 2110 2090 CONECT 2111 2090 CONECT 2112 2105 2113 2114 2115 CONECT 2113 2112 CONECT 2114 2112 CONECT 2115 2112 2116 CONECT 2116 2115 2117 CONECT 2117 2116 2118 2119 CONECT 2118 2117 2122 CONECT 2119 2117 2120 2121 CONECT 2120 2119 2134 CONECT 2121 2119 2122 CONECT 2122 2118 2121 2123 CONECT 2123 2122 2124 2133 CONECT 2124 2123 2125 CONECT 2125 2124 2128 CONECT 2126 2127 2128 2129 CONECT 2127 2126 CONECT 2128 2125 2126 2133 CONECT 2129 2126 2130 CONECT 2130 2129 2131 2132 CONECT 2131 2130 CONECT 2132 2130 2133 CONECT 2133 2123 2128 2132 CONECT 2134 2120 2135 2136 2137 CONECT 2135 2134 CONECT 2136 2134 CONECT 2137 2134 2138 CONECT 2138 2137 2139 CONECT 2139 2138 2140 2141 CONECT 2140 2139 2144 CONECT 2141 2139 2142 2143 CONECT 2142 2141 CONECT 2143 2141 2144 CONECT 2144 2140 2143 2145 CONECT 2145 2144 2146 2155 CONECT 2146 2145 2147 CONECT 2147 2146 2150 CONECT 2148 2149 2150 2151 CONECT 2149 2148 CONECT 2150 2147 2148 2155 CONECT 2151 2148 2152 CONECT 2152 2151 2153 2154 CONECT 2153 2152 CONECT 2154 2152 2155 CONECT 2155 2145 2150 2154 CONECT 2157 2158 2159 2165 CONECT 2158 2157 2160 2172 CONECT 2159 2157 2167 2168 CONECT 2160 2158 2161 CONECT 2161 2160 2163 2170 CONECT 2162 2168 2169 2171 CONECT 2163 2161 2164 2172 CONECT 2164 2163 2173 CONECT 2165 2157 2169 CONECT 2166 2169 CONECT 2167 2159 CONECT 2168 2159 2162 CONECT 2169 2162 2165 2166 CONECT 2170 2161 2196 CONECT 2171 2162 CONECT 2172 2158 2163 CONECT 2173 2164 2176 CONECT 2174 2176 CONECT 2175 2176 CONECT 2176 2173 2174 2175 CONECT 2177 2178 2179 2185 CONECT 2178 2177 2180 2192 CONECT 2179 2177 2187 2188 CONECT 2180 2178 2181 CONECT 2181 2180 2183 2190 CONECT 2182 2188 2189 2191 CONECT 2183 2181 2184 2192 CONECT 2184 2183 2193 CONECT 2185 2177 2189 CONECT 2186 2189 CONECT 2187 2179 CONECT 2188 2179 2182 CONECT 2189 2182 2185 2186 CONECT 2190 2181 2198 CONECT 2191 2182 CONECT 2192 2178 2183 CONECT 2193 2184 2196 CONECT 2194 2196 CONECT 2195 2196 CONECT 2196 2170 2193 2194 2195 CONECT 2197 2205 2215 2216 CONECT 2198 2190 2214 2217 2218 CONECT 2199 2200 2206 2207 CONECT 2200 2199 2201 2202 CONECT 2201 2200 CONECT 2202 2200 2203 CONECT 2203 2202 2204 2205 CONECT 2204 2203 CONECT 2205 2197 2203 2206 CONECT 2206 2199 2205 CONECT 2207 2199 2208 2212 CONECT 2208 2207 2209 CONECT 2209 2208 2210 2211 CONECT 2210 2209 2220 CONECT 2211 2209 2212 2213 CONECT 2212 2207 2211 CONECT 2213 2211 2214 CONECT 2214 2198 2213 CONECT 2215 2197 CONECT 2216 2197 CONECT 2217 2198 CONECT 2218 2198 CONECT 2219 2227 2237 2238 CONECT 2220 2210 2236 2239 2240 CONECT 2221 2222 2228 2229 CONECT 2222 2221 2223 2224 CONECT 2223 2222 CONECT 2224 2222 2225 CONECT 2225 2224 2226 2227 CONECT 2226 2225 CONECT 2227 2219 2225 2228 CONECT 2228 2221 2227 CONECT 2229 2221 2230 2234 CONECT 2230 2229 2231 CONECT 2231 2230 2232 2233 CONECT 2232 2231 2260 CONECT 2233 2231 2234 2235 CONECT 2234 2229 2233 CONECT 2235 2233 2236 CONECT 2236 2220 2235 CONECT 2237 2219 CONECT 2238 2219 CONECT 2239 2220 CONECT 2240 2220 CONECT 2241 2242 2243 2249 CONECT 2242 2241 2244 2256 CONECT 2243 2241 2251 2252 CONECT 2244 2242 2245 CONECT 2245 2244 2247 2254 CONECT 2246 2252 2253 2255 CONECT 2247 2245 2248 2256 CONECT 2248 2247 2257 CONECT 2249 2241 2253 CONECT 2250 2253 CONECT 2251 2243 CONECT 2252 2243 2246 CONECT 2253 2246 2249 2250 CONECT 2254 2245 2261 CONECT 2255 2246 CONECT 2256 2242 2247 CONECT 2257 2248 2260 CONECT 2258 2260 CONECT 2259 2260 CONECT 2260 2232 2257 2258 2259 CONECT 2261 2254 MASTER 271 0 10 9 9 0 0 6 2476 3 216 23 END