HEADER VIRAL PROTEIN 10-AUG-21 7V3A TITLE CRYSTAL STRUCTURE OF APO-NP EXONUCLEASE C409A COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NUCLEOCAPSID PROTEIN,PROTEIN N; COMPND 5 EC: 3.1.13.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LASSA VIRUS (STRAIN MOUSE/SIERRA SOURCE 3 LEONE/JOSIAH/1976); SOURCE 4 ORGANISM_COMMON: LASV; SOURCE 5 ORGANISM_TAXID: 11622; SOURCE 6 STRAIN: MOUSE/SIERRA LEONE/JOSIAH/1976; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEDDH EXONUCLEASE, NP EXONUCLEASE, ANTI-VIRAL DRUG, PCMPS, PCMB, KEYWDS 2 VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.HSIAO,K.W.HUANG REVDAT 3 29-NOV-23 7V3A 1 REMARK REVDAT 2 23-MAR-22 7V3A 1 JRNL REVDAT 1 15-DEC-21 7V3A 0 JRNL AUTH K.W.HUANG,J.W.CHEN,T.Y.HUA,Y.Y.CHU,T.Y.CHIU,J.Y.LIU,C.I.TU, JRNL AUTH 2 K.C.HSU,Y.T.KAO,J.W.CHU,Y.Y.HSIAO JRNL TITL TARGETED COVALENT INHIBITORS ALLOSTERICALLY DEACTIVATE THE JRNL TITL 2 DEDDH LASSA FEVER VIRUS NP EXONUCLEASE FROM ALTERNATIVE JRNL TITL 3 DISTAL SITES. JRNL REF JACS AU V. 1 2315 2021 JRNL REFN ESSN 2691-3704 JRNL PMID 34977900 JRNL DOI 10.1021/JACSAU.1C00420 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 32330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.570 REMARK 3 FREE R VALUE TEST SET COUNT : 2447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7940 - 5.3897 0.99 1880 169 0.1752 0.2092 REMARK 3 2 5.3897 - 4.2820 1.00 1800 153 0.1598 0.1937 REMARK 3 3 4.2820 - 3.7419 1.00 1766 169 0.1736 0.2129 REMARK 3 4 3.7419 - 3.4003 0.99 1766 142 0.2017 0.2376 REMARK 3 5 3.4003 - 3.1569 1.00 1754 146 0.2169 0.2445 REMARK 3 6 3.1569 - 2.9709 1.00 1780 109 0.2279 0.2746 REMARK 3 7 2.9709 - 2.8223 1.00 1735 154 0.2223 0.2362 REMARK 3 8 2.8223 - 2.6995 1.00 1771 145 0.2231 0.2424 REMARK 3 9 2.6995 - 2.5956 1.00 1769 118 0.2178 0.2639 REMARK 3 10 2.5956 - 2.5061 1.00 1735 156 0.2140 0.2935 REMARK 3 11 2.5061 - 2.4278 1.00 1725 147 0.2092 0.2494 REMARK 3 12 2.4278 - 2.3584 1.00 1738 135 0.2090 0.2814 REMARK 3 13 2.3584 - 2.2964 1.00 1743 139 0.2194 0.2617 REMARK 3 14 2.2964 - 2.2404 1.00 1725 164 0.2784 0.3247 REMARK 3 15 2.2404 - 2.1894 1.00 1744 130 0.2662 0.3124 REMARK 3 16 2.1894 - 2.1429 1.00 1735 145 0.2485 0.2715 REMARK 3 17 2.1429 - 2.1000 0.99 1717 126 0.2601 0.3194 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 35.6944 -0.2893 3.7086 REMARK 3 T TENSOR REMARK 3 T11: 0.2531 T22: 0.2196 REMARK 3 T33: 0.2161 T12: -0.0086 REMARK 3 T13: -0.0001 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 1.1330 L22: 0.1479 REMARK 3 L33: 0.2836 L12: -0.0804 REMARK 3 L13: -0.2731 L23: 0.0373 REMARK 3 S TENSOR REMARK 3 S11: -0.0273 S12: -0.0700 S13: -0.0112 REMARK 3 S21: 0.0416 S22: 0.0264 S23: 0.0114 REMARK 3 S31: 0.0129 S32: 0.0110 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V3A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300023895. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33231 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.44700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7V37 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE DIHYDRATE, 20% REMARK 280 W/V POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 63.66200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.76650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.71550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.76650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.66200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.71550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 321 REMARK 465 GLY A 322 REMARK 465 SER A 323 REMARK 465 SER A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 465 HIS A 330 REMARK 465 SER A 331 REMARK 465 SER A 332 REMARK 465 GLY A 333 REMARK 465 LEU A 334 REMARK 465 VAL A 335 REMARK 465 PRO A 336 REMARK 465 ARG A 337 REMARK 465 GLY A 338 REMARK 465 SER A 339 REMARK 465 HIS A 340 REMARK 465 MET A 341 REMARK 465 GLY A 342 REMARK 465 LYS A 343 REMARK 465 PRO A 344 REMARK 465 GLN A 345 REMARK 465 LYS A 346 REMARK 465 ALA A 347 REMARK 465 ASP A 348 REMARK 465 SER A 349 REMARK 465 ASN A 350 REMARK 465 ASN A 351 REMARK 465 SER A 352 REMARK 465 SER A 353 REMARK 465 LYS A 354 REMARK 465 SER A 355 REMARK 465 LEU A 356 REMARK 465 GLN A 357 REMARK 465 SER A 358 REMARK 465 ALA A 359 REMARK 465 GLY A 360 REMARK 465 PHE A 361 REMARK 465 THR A 362 REMARK 465 MET B 321 REMARK 465 GLY B 322 REMARK 465 SER B 323 REMARK 465 SER B 324 REMARK 465 HIS B 325 REMARK 465 HIS B 326 REMARK 465 HIS B 327 REMARK 465 HIS B 328 REMARK 465 HIS B 329 REMARK 465 HIS B 330 REMARK 465 SER B 331 REMARK 465 SER B 332 REMARK 465 GLY B 333 REMARK 465 LEU B 334 REMARK 465 VAL B 335 REMARK 465 PRO B 336 REMARK 465 ARG B 337 REMARK 465 GLY B 338 REMARK 465 SER B 339 REMARK 465 HIS B 340 REMARK 465 MET B 341 REMARK 465 GLY B 342 REMARK 465 LYS B 343 REMARK 465 PRO B 344 REMARK 465 GLN B 345 REMARK 465 LYS B 346 REMARK 465 ALA B 347 REMARK 465 ASP B 348 REMARK 465 SER B 349 REMARK 465 ASN B 350 REMARK 465 ASN B 351 REMARK 465 SER B 352 REMARK 465 SER B 353 REMARK 465 LYS B 354 REMARK 465 SER B 355 REMARK 465 LEU B 356 REMARK 465 GLN B 357 REMARK 465 SER B 358 REMARK 465 ALA B 359 REMARK 465 GLY B 360 REMARK 465 PHE B 361 REMARK 465 THR B 362 REMARK 465 LYS B 516 REMARK 465 LYS B 517 REMARK 465 LYS B 518 REMARK 465 ARG B 519 REMARK 465 GLY B 520 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 396 62.08 -153.99 REMARK 500 SER A 430 -75.86 -142.93 REMARK 500 ALA A 485 60.55 -116.59 REMARK 500 LYS A 518 2.69 -69.94 REMARK 500 ASP B 396 63.12 -153.59 REMARK 500 SER B 430 -80.34 -143.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 863 DISTANCE = 5.81 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 389 OD1 REMARK 620 2 HOH A 701 O 98.0 REMARK 620 3 HOH A 757 O 89.2 172.4 REMARK 620 4 HOH A 771 O 95.7 83.2 93.8 REMARK 620 5 HOH A 804 O 87.4 87.5 95.2 170.5 REMARK 620 6 HOH A 848 O 175.4 81.5 91.5 88.7 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 399 OE2 REMARK 620 2 CYS A 506 SG 106.9 REMARK 620 3 HIS A 509 NE2 110.6 110.5 REMARK 620 4 CYS A 529 SG 107.7 118.2 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 389 OD1 REMARK 620 2 HOH B 702 O 100.1 REMARK 620 3 HOH B 729 O 113.2 85.7 REMARK 620 4 HOH B 736 O 89.0 167.8 98.4 REMARK 620 5 HOH B 751 O 76.5 84.6 167.4 89.6 REMARK 620 6 HOH B 851 O 157.1 80.3 89.7 88.1 80.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 399 OE1 REMARK 620 2 CYS B 506 SG 105.6 REMARK 620 3 HIS B 509 NE2 110.8 108.2 REMARK 620 4 CYS B 529 SG 110.4 115.8 106.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7V37 RELATED DB: PDB REMARK 900 RELATED ID: 7V38 RELATED DB: PDB REMARK 900 RELATED ID: 7V39 RELATED DB: PDB DBREF 7V3A A 342 569 UNP P13699 NCAP_LASSJ 342 569 DBREF 7V3A B 342 569 UNP P13699 NCAP_LASSJ 342 569 SEQADV 7V3A MET A 321 UNP P13699 INITIATING METHIONINE SEQADV 7V3A GLY A 322 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER A 323 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER A 324 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 325 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 326 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 327 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 328 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 329 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 330 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER A 331 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER A 332 UNP P13699 EXPRESSION TAG SEQADV 7V3A GLY A 333 UNP P13699 EXPRESSION TAG SEQADV 7V3A LEU A 334 UNP P13699 EXPRESSION TAG SEQADV 7V3A VAL A 335 UNP P13699 EXPRESSION TAG SEQADV 7V3A PRO A 336 UNP P13699 EXPRESSION TAG SEQADV 7V3A ARG A 337 UNP P13699 EXPRESSION TAG SEQADV 7V3A GLY A 338 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER A 339 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS A 340 UNP P13699 EXPRESSION TAG SEQADV 7V3A MET A 341 UNP P13699 EXPRESSION TAG SEQADV 7V3A ALA A 409 UNP P13699 CYS 409 ENGINEERED MUTATION SEQADV 7V3A MET B 321 UNP P13699 INITIATING METHIONINE SEQADV 7V3A GLY B 322 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER B 323 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER B 324 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 325 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 326 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 327 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 328 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 329 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 330 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER B 331 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER B 332 UNP P13699 EXPRESSION TAG SEQADV 7V3A GLY B 333 UNP P13699 EXPRESSION TAG SEQADV 7V3A LEU B 334 UNP P13699 EXPRESSION TAG SEQADV 7V3A VAL B 335 UNP P13699 EXPRESSION TAG SEQADV 7V3A PRO B 336 UNP P13699 EXPRESSION TAG SEQADV 7V3A ARG B 337 UNP P13699 EXPRESSION TAG SEQADV 7V3A GLY B 338 UNP P13699 EXPRESSION TAG SEQADV 7V3A SER B 339 UNP P13699 EXPRESSION TAG SEQADV 7V3A HIS B 340 UNP P13699 EXPRESSION TAG SEQADV 7V3A MET B 341 UNP P13699 EXPRESSION TAG SEQADV 7V3A ALA B 409 UNP P13699 CYS 409 ENGINEERED MUTATION SEQRES 1 A 249 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 249 LEU VAL PRO ARG GLY SER HIS MET GLY LYS PRO GLN LYS SEQRES 3 A 249 ALA ASP SER ASN ASN SER SER LYS SER LEU GLN SER ALA SEQRES 4 A 249 GLY PHE THR ALA GLY LEU THR TYR SER GLN LEU MET THR SEQRES 5 A 249 LEU LYS ASP ALA MET LEU GLN LEU ASP PRO ASN ALA LYS SEQRES 6 A 249 THR TRP MET ASP ILE GLU GLY ARG PRO GLU ASP PRO VAL SEQRES 7 A 249 GLU ILE ALA LEU TYR GLN PRO SER SER GLY ALA TYR ILE SEQRES 8 A 249 HIS PHE PHE ARG GLU PRO THR ASP LEU LYS GLN PHE LYS SEQRES 9 A 249 GLN ASP ALA LYS TYR SER HIS GLY ILE ASP VAL THR ASP SEQRES 10 A 249 LEU PHE ALA THR GLN PRO GLY LEU THR SER ALA VAL ILE SEQRES 11 A 249 ASP ALA LEU PRO ARG ASN MET VAL ILE THR CYS GLN GLY SEQRES 12 A 249 SER ASP ASP ILE ARG LYS LEU LEU GLU SER GLN GLY ARG SEQRES 13 A 249 LYS ASP ILE LYS LEU ILE ASP ILE ALA LEU SER LYS THR SEQRES 14 A 249 ASP SER ARG LYS TYR GLU ASN ALA VAL TRP ASP GLN TYR SEQRES 15 A 249 LYS ASP LEU CYS HIS MET HIS THR GLY VAL VAL VAL GLU SEQRES 16 A 249 LYS LYS LYS ARG GLY GLY LYS GLU GLU ILE THR PRO HIS SEQRES 17 A 249 CYS ALA LEU MET ASP CYS ILE MET PHE ASP ALA ALA VAL SEQRES 18 A 249 SER GLY GLY LEU ASN THR SER VAL LEU ARG ALA VAL LEU SEQRES 19 A 249 PRO ARG ASP MET VAL PHE ARG THR SER THR PRO ARG VAL SEQRES 20 A 249 VAL LEU SEQRES 1 B 249 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 249 LEU VAL PRO ARG GLY SER HIS MET GLY LYS PRO GLN LYS SEQRES 3 B 249 ALA ASP SER ASN ASN SER SER LYS SER LEU GLN SER ALA SEQRES 4 B 249 GLY PHE THR ALA GLY LEU THR TYR SER GLN LEU MET THR SEQRES 5 B 249 LEU LYS ASP ALA MET LEU GLN LEU ASP PRO ASN ALA LYS SEQRES 6 B 249 THR TRP MET ASP ILE GLU GLY ARG PRO GLU ASP PRO VAL SEQRES 7 B 249 GLU ILE ALA LEU TYR GLN PRO SER SER GLY ALA TYR ILE SEQRES 8 B 249 HIS PHE PHE ARG GLU PRO THR ASP LEU LYS GLN PHE LYS SEQRES 9 B 249 GLN ASP ALA LYS TYR SER HIS GLY ILE ASP VAL THR ASP SEQRES 10 B 249 LEU PHE ALA THR GLN PRO GLY LEU THR SER ALA VAL ILE SEQRES 11 B 249 ASP ALA LEU PRO ARG ASN MET VAL ILE THR CYS GLN GLY SEQRES 12 B 249 SER ASP ASP ILE ARG LYS LEU LEU GLU SER GLN GLY ARG SEQRES 13 B 249 LYS ASP ILE LYS LEU ILE ASP ILE ALA LEU SER LYS THR SEQRES 14 B 249 ASP SER ARG LYS TYR GLU ASN ALA VAL TRP ASP GLN TYR SEQRES 15 B 249 LYS ASP LEU CYS HIS MET HIS THR GLY VAL VAL VAL GLU SEQRES 16 B 249 LYS LYS LYS ARG GLY GLY LYS GLU GLU ILE THR PRO HIS SEQRES 17 B 249 CYS ALA LEU MET ASP CYS ILE MET PHE ASP ALA ALA VAL SEQRES 18 B 249 SER GLY GLY LEU ASN THR SER VAL LEU ARG ALA VAL LEU SEQRES 19 B 249 PRO ARG ASP MET VAL PHE ARG THR SER THR PRO ARG VAL SEQRES 20 B 249 VAL LEU HET ZN A 601 1 HET MG A 602 1 HET ZN B 601 1 HET MG B 602 1 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *323(H2 O) HELIX 1 AA1 THR A 366 MET A 377 1 12 HELIX 2 AA2 LEU A 378 LEU A 380 5 3 HELIX 3 AA3 ASP A 419 SER A 430 1 12 HELIX 4 AA4 ASP A 434 PHE A 439 5 6 HELIX 5 AA5 GLY A 444 LEU A 453 1 10 HELIX 6 AA6 GLY A 463 GLN A 474 1 12 HELIX 7 AA7 SER A 487 ARG A 492 1 6 HELIX 8 AA8 TYR A 494 TYR A 502 1 9 HELIX 9 AA9 LYS A 503 CYS A 506 5 4 HELIX 10 AB1 CYS A 529 GLY A 543 1 15 HELIX 11 AB2 PRO A 555 PHE A 560 1 6 HELIX 12 AB3 THR B 366 LEU B 378 1 13 HELIX 13 AB4 ASP B 419 SER B 430 1 12 HELIX 14 AB5 ASP B 434 PHE B 439 5 6 HELIX 15 AB6 GLY B 444 ALA B 452 1 9 HELIX 16 AB7 GLY B 463 GLN B 474 1 12 HELIX 17 AB8 SER B 487 ARG B 492 1 6 HELIX 18 AB9 TYR B 494 LYS B 503 1 10 HELIX 19 AC1 ASP B 504 CYS B 506 5 3 HELIX 20 AC2 CYS B 529 GLY B 543 1 15 HELIX 21 AC3 PRO B 555 PHE B 560 1 6 SHEET 1 AA1 4 TRP A 387 GLU A 391 0 SHEET 2 AA1 4 GLU A 399 TYR A 403 -1 O TYR A 403 N TRP A 387 SHEET 3 AA1 4 ALA A 409 PHE A 414 -1 O ILE A 411 N LEU A 402 SHEET 4 AA1 4 ARG A 551 ALA A 552 1 O ARG A 551 N TYR A 410 SHEET 1 AA2 2 VAL A 458 GLN A 462 0 SHEET 2 AA2 2 LYS A 480 ILE A 484 1 O LYS A 480 N ILE A 459 SHEET 1 AA3 2 VAL A 513 LYS A 516 0 SHEET 2 AA3 2 LYS A 522 ILE A 525 -1 O ILE A 525 N VAL A 513 SHEET 1 AA4 6 LYS B 480 ASP B 483 0 SHEET 2 AA4 6 VAL B 458 CYS B 461 1 N ILE B 459 O LYS B 480 SHEET 3 AA4 6 THR B 386 ARG B 393 1 N THR B 386 O THR B 460 SHEET 4 AA4 6 ASP B 396 TYR B 403 -1 O TYR B 403 N TRP B 387 SHEET 5 AA4 6 ALA B 409 PHE B 414 -1 O ILE B 411 N LEU B 402 SHEET 6 AA4 6 ARG B 551 ALA B 552 1 O ARG B 551 N TYR B 410 SHEET 1 AA5 2 VAL B 513 GLU B 515 0 SHEET 2 AA5 2 GLU B 523 ILE B 525 -1 O ILE B 525 N VAL B 513 LINK OD1 ASP A 389 MG MG A 602 1555 1555 2.10 LINK OE2 GLU A 399 ZN ZN A 601 1555 1555 2.01 LINK SG CYS A 506 ZN ZN A 601 1555 1555 2.30 LINK NE2 HIS A 509 ZN ZN A 601 1555 1555 2.04 LINK SG CYS A 529 ZN ZN A 601 1555 1555 2.34 LINK MG MG A 602 O HOH A 701 1555 1555 2.16 LINK MG MG A 602 O HOH A 757 1555 1555 2.14 LINK MG MG A 602 O HOH A 771 1555 1555 2.14 LINK MG MG A 602 O HOH A 804 1555 1555 2.16 LINK MG MG A 602 O HOH A 848 1555 1555 2.16 LINK OD1 ASP B 389 MG MG B 602 1555 1555 2.00 LINK OE1 GLU B 399 ZN ZN B 601 1555 1555 2.05 LINK SG CYS B 506 ZN ZN B 601 1555 1555 2.23 LINK NE2 HIS B 509 ZN ZN B 601 1555 1555 2.06 LINK SG CYS B 529 ZN ZN B 601 1555 1555 2.29 LINK MG MG B 602 O HOH B 702 1555 1555 2.01 LINK MG MG B 602 O HOH B 729 1555 1555 2.06 LINK MG MG B 602 O HOH B 736 1555 1555 2.10 LINK MG MG B 602 O HOH B 751 1555 1555 2.34 LINK MG MG B 602 O HOH B 851 1555 1555 2.23 SITE 1 AC1 4 GLU A 399 CYS A 506 HIS A 509 CYS A 529 SITE 1 AC2 6 ASP A 389 HOH A 701 HOH A 757 HOH A 771 SITE 2 AC2 6 HOH A 804 HOH A 848 SITE 1 AC3 4 GLU B 399 CYS B 506 HIS B 509 CYS B 529 SITE 1 AC4 6 ASP B 389 HOH B 702 HOH B 729 HOH B 736 SITE 2 AC4 6 HOH B 751 HOH B 851 CRYST1 127.324 59.431 71.533 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007854 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016826 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013980 0.00000