HEADER ANTIBIOTIC 13-AUG-21 7V4N TITLE UNIQUE NON-HEME HYDROXYLASE IN BIOSYNTHESIS OF NUCLEOSIDE ANTIBIOTIC TITLE 2 PATHWAY UNCOVER MECHANISM OF REACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-HYDROXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. MK730-62F2; SOURCE 3 ORGANISM_TAXID: 643403; SOURCE 4 GENE: CPZ10; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI-PICHIA PASTORIS SHUTTLE VECTOR SOURCE 6 PPPGUT1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1182037 KEYWDS CAPRAZAMYCIN, MRAY, BETA-HYDROXYLASE, ANTIBIOTIC EXPDTA X-RAY DIFFRACTION AUTHOR T.L.LI,M.Z.SAEID REVDAT 3 29-NOV-23 7V4N 1 REMARK REVDAT 2 10-AUG-22 7V4N 1 JRNL REVDAT 1 23-FEB-22 7V4N 0 JRNL AUTH S.M.ZADEH,M.H.CHEN,Z.C.WANG,E.K.ASTANI,I.W.LO,K.H.LIN, JRNL AUTH 2 N.S.HSU,K.ADHIKARI,S.Y.LYU,H.Y.TSAI,Y.TERASAWA,M.YABE, JRNL AUTH 3 K.YAMAMOTO,S.ICHIKAWA,T.L.LI JRNL TITL BETA-HYDROXYLATION OF JRNL TITL 2 ALPHA-AMINO-BETA-HYDROXYLBUTANOYL-GLYCYLURIDINE CATALYZED BY JRNL TITL 3 A NONHEME HYDROXYLASE ENSURES THE MATURATION OF CAPRAZAMYCIN JRNL REF COMMUN CHEM V. 5 87 2022 JRNL REFN ESSN 2399-3669 JRNL DOI 10.1038/S42004-022-00703-6 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.1600 - 4.1000 1.00 1340 149 0.1341 0.1798 REMARK 3 2 4.1000 - 3.5900 1.00 1309 146 0.1604 0.2225 REMARK 3 3 3.5900 - 3.2600 1.00 1302 145 0.1867 0.2664 REMARK 3 4 3.2600 - 3.0300 1.00 1294 143 0.2108 0.2775 REMARK 3 5 3.0200 - 2.8500 1.00 1292 144 0.2270 0.2981 REMARK 3 6 2.8500 - 2.7000 1.00 1278 142 0.2178 0.3204 REMARK 3 7 2.7000 - 2.5900 1.00 1288 143 0.2276 0.2677 REMARK 3 8 2.5900 - 2.4900 1.00 1265 140 0.2167 0.3103 REMARK 3 9 2.4900 - 2.4000 1.00 1282 143 0.2233 0.3018 REMARK 3 10 2.4000 - 2.3300 1.00 1266 140 0.2270 0.3063 REMARK 3 11 2.3300 - 2.2600 1.00 1271 142 0.2261 0.3065 REMARK 3 12 2.2600 - 2.2000 1.00 1272 141 0.2231 0.2966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2888 REMARK 3 ANGLE : 1.757 3929 REMARK 3 CHIRALITY : 0.076 422 REMARK 3 PLANARITY : 0.010 520 REMARK 3 DIHEDRAL : 21.441 395 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7V4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1300023987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18830 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 29.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4P7X REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.2M SODIUM CHLORIDE 0.1 M TRIS PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.12550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.12150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.18825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.12150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.06275 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.12150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 78.18825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.12150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 26.06275 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.12550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 FE FE A 201 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 315 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 316 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLY A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 LYS A 6 REMARK 465 ALA A 7 REMARK 465 CYS A 8 REMARK 465 PHE A 9 REMARK 465 VAL A 10 REMARK 465 THR A 11 REMARK 465 GLU A 180 REMARK 465 SER A 181 REMARK 465 LYS A 182 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLY B 3 REMARK 465 ARG B 4 REMARK 465 ARG B 5 REMARK 465 LYS B 6 REMARK 465 ALA B 7 REMARK 465 CYS B 8 REMARK 465 PHE B 9 REMARK 465 VAL B 10 REMARK 465 THR B 11 REMARK 465 GLU B 180 REMARK 465 SER B 181 REMARK 465 LYS B 182 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 116 O HOH A 301 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 140 NZ LYS B 141 7555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 18 CB GLU B 18 CG 0.138 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 65 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP A 74 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 170 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 170 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 170 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 GLU B 42 OE1 - CD - OE2 ANGL. DEV. = -29.7 DEGREES REMARK 500 GLU B 42 CG - CD - OE1 ANGL. DEV. = 35.8 DEGREES REMARK 500 GLU B 42 CG - CD - OE2 ANGL. DEV. = -28.6 DEGREES REMARK 500 GLY B 43 C - N - CA ANGL. DEV. = -12.9 DEGREES REMARK 500 ASP B 74 CB - CG - OD1 ANGL. DEV. = -7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 41 -174.49 71.87 REMARK 500 ASP B 20 23.49 83.71 REMARK 500 PHE B 41 173.66 85.20 REMARK 500 HIS B 79 152.15 -49.47 REMARK 500 THR B 156 5.28 -63.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLU B 42 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 89 OE1 REMARK 620 2 GLU A 89 OE1 0.0 REMARK 620 3 ASP A 92 OD2 99.1 99.1 REMARK 620 4 ASP A 92 OD2 99.1 99.1 0.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 140 O REMARK 620 2 ASP B 140 O 72.3 REMARK 620 N 1 DBREF 7V4N A 1 182 UNP C4NCJ7 C4NCJ7_9ACTN 1 182 DBREF 7V4N B 1 182 UNP C4NCJ7 C4NCJ7_9ACTN 1 182 SEQRES 1 A 182 MET PRO GLY ARG ARG LYS ALA CYS PHE VAL THR ALA LEU SEQRES 2 A 182 THR SER ARG THR GLU LEU ASP ILE ASP PRO ASP LYS LEU SEQRES 3 A 182 ARG GLU SER VAL VAL GLU LEU LEU GLU ARG HIS PRO LEU SEQRES 4 A 182 VAL PHE GLU GLY THR ARG GLN LEU ALA LEU GLN HIS ARG SEQRES 5 A 182 PRO GLU ALA THR ASP PRO TRP TYR GLU GLY CYS GLN ARG SEQRES 6 A 182 GLN SER LEU ILE SER SER ASP SER ASP PHE THR GLU VAL SEQRES 7 A 182 HIS GLY GLU LEU ARG ASP THR TYR LEU GLY GLU VAL PHE SEQRES 8 A 182 ASP ARG LEU PRO PHE LYS PRO ILE ARG THR ARG ILE MET SEQRES 9 A 182 ALA LEU ASP PRO LYS TYR CYS TYR SER VAL HIS ARG ASP SEQRES 10 A 182 LEU THR PRO ARG TYR HIS LEU ALA VAL THR THR SER GLU SEQRES 11 A 182 HIS ALA ARG PHE VAL PHE ILE GLU HIS ASP LYS VAL LEU SEQRES 12 A 182 HIS ILE PRO ALA ASP GLY ASP LEU TYR TYR VAL ASP THR SEQRES 13 A 182 ARG GLN LEU HIS SER ALA PHE ASN GLY GLY ASP ASP MET SEQRES 14 A 182 ARG ILE HIS ILE VAL PHE GLY THR ASP GLY GLU SER LYS SEQRES 1 B 182 MET PRO GLY ARG ARG LYS ALA CYS PHE VAL THR ALA LEU SEQRES 2 B 182 THR SER ARG THR GLU LEU ASP ILE ASP PRO ASP LYS LEU SEQRES 3 B 182 ARG GLU SER VAL VAL GLU LEU LEU GLU ARG HIS PRO LEU SEQRES 4 B 182 VAL PHE GLU GLY THR ARG GLN LEU ALA LEU GLN HIS ARG SEQRES 5 B 182 PRO GLU ALA THR ASP PRO TRP TYR GLU GLY CYS GLN ARG SEQRES 6 B 182 GLN SER LEU ILE SER SER ASP SER ASP PHE THR GLU VAL SEQRES 7 B 182 HIS GLY GLU LEU ARG ASP THR TYR LEU GLY GLU VAL PHE SEQRES 8 B 182 ASP ARG LEU PRO PHE LYS PRO ILE ARG THR ARG ILE MET SEQRES 9 B 182 ALA LEU ASP PRO LYS TYR CYS TYR SER VAL HIS ARG ASP SEQRES 10 B 182 LEU THR PRO ARG TYR HIS LEU ALA VAL THR THR SER GLU SEQRES 11 B 182 HIS ALA ARG PHE VAL PHE ILE GLU HIS ASP LYS VAL LEU SEQRES 12 B 182 HIS ILE PRO ALA ASP GLY ASP LEU TYR TYR VAL ASP THR SEQRES 13 B 182 ARG GLN LEU HIS SER ALA PHE ASN GLY GLY ASP ASP MET SEQRES 14 B 182 ARG ILE HIS ILE VAL PHE GLY THR ASP GLY GLU SER LYS HET FE A 201 1 HET FE B 201 1 HETNAM FE FE (III) ION FORMUL 3 FE 2(FE 3+) FORMUL 5 HOH *44(H2 O) HELIX 1 AA1 ASP A 22 HIS A 37 1 16 HELIX 2 AA2 GLY A 80 ARG A 83 5 4 HELIX 3 AA3 THR A 85 LEU A 94 1 10 HELIX 4 AA4 ASP B 22 HIS B 37 1 16 HELIX 5 AA5 TYR B 60 GLN B 64 5 5 HELIX 6 AA6 ARG B 65 ILE B 69 5 5 HELIX 7 AA7 SER B 71 PHE B 75 5 5 HELIX 8 AA8 GLY B 80 ARG B 83 5 4 HELIX 9 AA9 THR B 85 LEU B 94 1 10 SHEET 1 AA1 6 THR A 14 THR A 17 0 SHEET 2 AA1 6 LEU A 151 VAL A 154 -1 O LEU A 151 N THR A 17 SHEET 3 AA1 6 ARG A 121 THR A 127 -1 N HIS A 123 O TYR A 152 SHEET 4 AA1 6 ARG A 170 GLY A 176 -1 O ILE A 173 N LEU A 124 SHEET 5 AA1 6 ILE A 99 LEU A 106 -1 N ARG A 102 O VAL A 174 SHEET 6 AA1 6 THR A 44 ALA A 48 -1 N ARG A 45 O ALA A 105 SHEET 1 AA2 2 GLN A 50 HIS A 51 0 SHEET 2 AA2 2 GLU A 77 VAL A 78 -1 O GLU A 77 N HIS A 51 SHEET 1 AA3 4 TYR A 110 CYS A 111 0 SHEET 2 AA3 4 HIS A 160 ASN A 164 -1 O ASN A 164 N TYR A 110 SHEET 3 AA3 4 ALA A 132 PHE A 136 -1 N VAL A 135 O SER A 161 SHEET 4 AA3 4 LYS A 141 LEU A 143 -1 O LEU A 143 N PHE A 134 SHEET 1 AA4 6 THR B 14 THR B 17 0 SHEET 2 AA4 6 LEU B 151 VAL B 154 -1 O TYR B 153 N SER B 15 SHEET 3 AA4 6 ARG B 121 THR B 127 -1 N HIS B 123 O TYR B 152 SHEET 4 AA4 6 ARG B 170 THR B 177 -1 O ILE B 171 N VAL B 126 SHEET 5 AA4 6 PRO B 98 LEU B 106 -1 N ARG B 102 O VAL B 174 SHEET 6 AA4 6 THR B 44 ALA B 48 -1 N LEU B 47 O ILE B 103 SHEET 1 AA5 2 GLN B 50 HIS B 51 0 SHEET 2 AA5 2 GLU B 77 VAL B 78 -1 O GLU B 77 N HIS B 51 SHEET 1 AA6 4 TYR B 110 CYS B 111 0 SHEET 2 AA6 4 HIS B 160 ASN B 164 -1 O ASN B 164 N TYR B 110 SHEET 3 AA6 4 ALA B 132 PHE B 136 -1 N VAL B 135 O SER B 161 SHEET 4 AA6 4 LYS B 141 LEU B 143 -1 O LYS B 141 N PHE B 136 LINK OE1 GLU A 89 FE FE A 201 1555 1555 2.32 LINK OE1 GLU A 89 FE FE A 201 1555 8665 2.32 LINK OD2 ASP A 92 FE FE A 201 1555 1555 2.43 LINK OD2 ASP A 92 FE FE A 201 1555 8665 2.43 LINK O ASP A 140 FE FE B 201 1555 7555 2.50 LINK O ASP B 140 FE FE B 201 1555 1555 2.46 CRYST1 82.243 82.243 104.251 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012159 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012159 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009592 0.00000