HEADER HYDROLASE 08-OCT-21 7VMA TITLE THE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF AMYLO-ALPHA-1,6-GLUCOSIDASE TITLE 2 FROM THERMOCOCCUS GAMMATOLERANS STB12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLO-ALPHA-1,6-GLUCOSIDASE, PUTATIVE ARCHAEAL TYPE COMPND 3 GLYCOGEN DEBRANCHING ENZYME (GDE); COMPND 4 CHAIN: A, B; COMPND 5 EC: 3.2.1.33; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS GAMMATOLERANS EJ3; SOURCE 3 ORGANISM_TAXID: 593117; SOURCE 4 STRAIN: DSM 15229 / JCM 11827 / EJ3; SOURCE 5 GENE: GDE, TGAM_1568; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS AMYLO-ALPHA-1, 6-GLUCOSIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.F.LI,X.F.BAN,Y.M.WANG,C.M.LI,Z.B.GU REVDAT 2 03-APR-24 7VMA 1 REMARK REVDAT 1 12-OCT-22 7VMA 0 JRNL AUTH Z.F.LI,X.F.BAN,Y.M.WANG,C.M.LI,Z.B.GU JRNL TITL THE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF JRNL TITL 2 AMYLO-ALPHA-1,6-GLUCOSIDASE FROM THERMOCOCCUS GANNATILERANS JRNL TITL 3 STB12 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.328 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9915 - 6.2284 0.99 2737 145 0.1752 0.2236 REMARK 3 2 6.2284 - 4.9468 1.00 2746 133 0.2311 0.3544 REMARK 3 3 4.9468 - 4.3224 1.00 2696 173 0.2239 0.3255 REMARK 3 4 4.3224 - 3.9276 1.00 2756 114 0.2516 0.3514 REMARK 3 5 3.9276 - 3.6463 1.00 2692 153 0.2847 0.3817 REMARK 3 6 3.6463 - 3.4315 1.00 2734 156 0.3035 0.4061 REMARK 3 7 3.4315 - 3.2597 1.00 2721 137 0.3272 0.3898 REMARK 3 8 3.2597 - 3.1179 1.00 2687 153 0.3362 0.4074 REMARK 3 9 3.1179 - 2.9979 1.00 2702 149 0.3489 0.4069 REMARK 3 10 2.9979 - 2.8945 1.00 2740 125 0.3458 0.4016 REMARK 3 11 2.8945 - 2.8040 0.99 2692 124 0.3526 0.4337 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.600 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 42.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VMA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300024591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44230 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.520 REMARK 200 RESOLUTION RANGE LOW (A) : 48.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.02200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.14_3260 REMARK 200 STARTING MODEL: PREDICT USING ALPHA-FOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25%TERTIARY BUTANOL; 0.1M TRIS, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 54.04350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 54.04350 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.59950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.04350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.29975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.04350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 168.89925 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.04350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.04350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 112.59950 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 54.04350 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 168.89925 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 54.04350 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 56.29975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 108.08700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 108.08700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 67 O SER B 93 1.48 REMARK 500 OD2 ASP A 409 CG2 THR A 412 1.53 REMARK 500 OD2 ASP A 15 CB ASP A 19 1.71 REMARK 500 CE MET A 20 CA GLY A 26 1.91 REMARK 500 OD1 ASP A 15 N ASP A 19 1.94 REMARK 500 O ALA A 38 O HOH A 701 1.97 REMARK 500 ND2 ASN A 559 O HOH A 702 2.01 REMARK 500 OE1 GLU B 277 NZ LYS B 363 2.02 REMARK 500 O ASP A 409 CD2 LEU A 413 2.07 REMARK 500 OE1 GLU B 541 OG SER B 560 2.09 REMARK 500 OE1 GLU B 332 O HOH B 701 2.09 REMARK 500 CB ASP A 409 OG1 THR A 412 2.11 REMARK 500 O ALA B 229 NE2 GLN B 562 2.16 REMARK 500 N ARG B 479 OD1 ASN B 550 2.17 REMARK 500 NZ LYS A 37 O HOH A 701 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 588 OG SER B 93 7544 1.87 REMARK 500 NZ LYS A 166 OE1 GLU A 551 6555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 43 C - N - CA ANGL. DEV. = -15.1 DEGREES REMARK 500 LYS A 275 CD - CE - NZ ANGL. DEV. = -14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 6 132.99 -172.70 REMARK 500 MET A 20 58.68 -119.22 REMARK 500 PRO A 21 -99.29 -77.84 REMARK 500 SER A 22 143.46 -26.85 REMARK 500 TYR A 24 43.61 -78.20 REMARK 500 LYS A 37 67.64 3.84 REMARK 500 ILE A 49 -38.35 -131.99 REMARK 500 THR A 54 -144.26 -106.66 REMARK 500 GLU A 91 20.15 -77.00 REMARK 500 ALA A 104 62.54 -116.48 REMARK 500 ILE A 106 40.40 -62.60 REMARK 500 MET A 116 17.37 48.71 REMARK 500 ALA A 125 118.92 48.09 REMARK 500 GLU A 149 108.77 -55.36 REMARK 500 LEU A 164 15.95 55.70 REMARK 500 ARG A 189 15.55 -150.67 REMARK 500 ALA A 235 46.00 -82.62 REMARK 500 PRO A 237 108.61 -58.44 REMARK 500 TYR A 252 -47.70 -133.93 REMARK 500 GLU A 255 -19.68 -45.39 REMARK 500 GLN A 268 150.27 -46.64 REMARK 500 ASN A 273 109.82 -163.01 REMARK 500 PHE A 287 69.56 -150.09 REMARK 500 ALA A 301 65.03 -165.07 REMARK 500 ASP A 374 -162.45 -109.14 REMARK 500 SER A 404 71.19 46.63 REMARK 500 LEU A 408 -162.92 -68.96 REMARK 500 GLU A 410 -100.39 -80.31 REMARK 500 LYS A 411 -5.89 -57.04 REMARK 500 HIS A 463 55.31 -95.76 REMARK 500 ALA A 491 60.91 -100.15 REMARK 500 ARG A 519 63.89 -117.93 REMARK 500 ARG A 598 76.26 -102.56 REMARK 500 ASN A 612 79.03 -156.57 REMARK 500 ASP B 15 -164.27 -70.39 REMARK 500 LEU B 30 73.37 33.48 REMARK 500 ILE B 49 -96.17 -102.62 REMARK 500 ASP B 77 75.81 -161.07 REMARK 500 GLU B 92 -175.08 -63.97 REMARK 500 ILE B 106 63.40 -63.72 REMARK 500 SER B 180 22.31 -70.34 REMARK 500 ARG B 189 33.30 -165.75 REMARK 500 TYR B 252 -32.46 -135.39 REMARK 500 HIS B 285 -62.79 -103.39 REMARK 500 PRO B 299 34.18 -84.07 REMARK 500 PHE B 300 56.23 -103.79 REMARK 500 ALA B 301 61.21 -154.79 REMARK 500 LYS B 363 18.19 -141.94 REMARK 500 ARG B 446 48.94 -71.77 REMARK 500 VAL B 448 109.63 -55.48 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 7VMA A 1 620 UNP C5A758 C5A758_THEGJ 1 620 DBREF 7VMA B 1 620 UNP C5A758 C5A758_THEGJ 1 620 SEQRES 1 A 620 MET ARG THR ILE LEU ALA GLY ASN GLY ALA PHE VAL LEU SEQRES 2 A 620 SER ASP GLU ARG GLY ASP MET PRO SER HIS TYR ASP GLY SEQRES 3 A 620 PHE TYR PHE LEU ASP THR ARG PHE VAL ARG LYS ALA ARG SEQRES 4 A 620 LEU GLU VAL SER PRO GLU PRO ASP PHE ILE GLY ALA SER SEQRES 5 A 620 SER THR PHE THR ARG ALA VAL SER HIS PHE SER LEU GLY SEQRES 6 A 620 GLU ARG GLY ILE LEU VAL ARG LEU ARG THR LEU ASP GLY SEQRES 7 A 620 VAL TYR GLU GLU LYS LEU SER PHE TYR ASN THR SER GLU SEQRES 8 A 620 GLU SER LEU GLY VAL LYS VAL ARG TYR SER TYR GLU ALA SEQRES 9 A 620 PRO ILE GLU ASP ILE PHE GLN VAL ARG GLY PHE MET GLY SEQRES 10 A 620 LEU LYS SER GLY LYS ALA ILE ALA PRO ALA GLY GLY THR SEQRES 11 A 620 HIS VAL LYS GLU SER PRO SER GLY ARG ARG SER LEU SER SEQRES 12 A 620 ILE GLU THR ASN MET GLU ARG GLU GLY SER LEU LEU ARG SEQRES 13 A 620 ALA GLU LEU GLU ILE PRO PRO LEU GLY LYS ALA VAL LEU SEQRES 14 A 620 TYR VAL ARG PHE ILE PRO LYS ILE GLU GLY SER ILE SER SEQRES 15 A 620 GLU ILE LEU GLY GLU LYS ARG LYS THR ILE LYS ASN VAL SEQRES 16 A 620 ALA PHE THR GLY SER PRO ALA ILE ASP GLY ILE PHE GLU SEQRES 17 A 620 ARG ALA VAL GLU ASN ILE ASN ALA LEU THR LEU PHE THR SEQRES 18 A 620 ARG PHE GLY PRO VAL PRO LEU ALA GLY ILE PRO TYR PHE SEQRES 19 A 620 ALA CYS PRO PHE GLY ARG ASP ALA ILE ILE ALA SER LEU SEQRES 20 A 620 PHE LEU LEU PRO TYR TYR PRO GLU TYR ALA ALA GLY THR SEQRES 21 A 620 LEU ARG LEU PHE GLY ARG LEU GLN GLY LYS ARG THR ASN SEQRES 22 A 620 PRO LYS ASN GLU GLU GLU PRO GLY LYS ILE PRO HIS GLU SEQRES 23 A 620 PHE ARG LEU GLY GLU LEU ALA GLN SER GLY LYS VAL PRO SEQRES 24 A 620 PHE ALA PRO TYR TYR GLY THR VAL ASP ALA THR PRO LEU SEQRES 25 A 620 TYR VAL ALA LEU ALA GLY GLU TYR LEU ARG TRP THR GLY SEQRES 26 A 620 ASP ARG LYS LEU ILE GLU GLU LEU ARG PRO ASN LEU THR SEQRES 27 A 620 ALA ALA VAL GLU TRP ILE LEU LYS LYS LEU ASP ASP GLY SEQRES 28 A 620 TYR ILE THR TYR VAL PRO GLY ILE LEU GLY ASN LYS GLY SEQRES 29 A 620 TRP LYS ASP SER ARG ASP GLY ILE ILE ASP GLU GLU GLY SEQRES 30 A 620 LYS ILE PRO LYS PRO PRO ILE ALA LEU VAL GLU VAL GLN SEQRES 31 A 620 GLY TYR THR TYR TRP ALA LEU LYS LEU ALA GLY GLU LEU SEQRES 32 A 620 SER LEU THR ASP LEU ASP GLU LYS THR LEU LEU ALA GLU SEQRES 33 A 620 ALA GLU LYS LEU LYS LYS ARG PHE ASN ARG ASP PHE TRP SEQRES 34 A 620 LEU GLY SER TYR TYR ALA LEU ALA LEU ASP GLY GLU GLY SEQRES 35 A 620 ARG PRO LEU ARG VAL VAL SER SER ASN MET GLY HIS LEU SEQRES 36 A 620 LEU LEU THR GLY ILE ALA GLU HIS GLU GLU GLU LEU ALA SEQRES 37 A 620 GLU ARG LEU PHE ARG PRO ASP MET PHE SER ARG TYR GLY SEQRES 38 A 620 ILE ARG THR LEU SER ALA LYS GLU LYS ALA TYR ASN PRO SEQRES 39 A 620 PHE SER TYR HIS ARG GLY SER VAL TRP PRO HIS ASP ASN SEQRES 40 A 620 ALA LEU ILE ALA LEU GLY LEU ALA ARG ILE GLY ARG THR SEQRES 41 A 620 ASP MET ALA LYS ALA LEU MET ASP ALA VAL PHE ASP ALA SEQRES 42 A 620 ALA LYS LEU LEU PRO GLU ARG GLU LEU PRO GLU LEU TYR SEQRES 43 A 620 SER GLY LEU ASN GLU LEU VAL PRO VAL PRO ARG ALA ASN SEQRES 44 A 620 SER PRO GLN ALA TRP SER SER ALA SER VAL PHE ALA PHE SEQRES 45 A 620 VAL THR ALA SER LEU GLY MET GLU ALA GLY ASP GLU LEU SEQRES 46 A 620 THR VAL ARG PRO ALA GLU GLY THR SER ILE VAL LEU ARG SEQRES 47 A 620 GLY VAL SER PHE GLY GLY ARG ARG TYR VAL VAL VAL VAL SEQRES 48 A 620 ASN GLY GLY VAL SER VAL GLU PRO LEU SEQRES 1 B 620 MET ARG THR ILE LEU ALA GLY ASN GLY ALA PHE VAL LEU SEQRES 2 B 620 SER ASP GLU ARG GLY ASP MET PRO SER HIS TYR ASP GLY SEQRES 3 B 620 PHE TYR PHE LEU ASP THR ARG PHE VAL ARG LYS ALA ARG SEQRES 4 B 620 LEU GLU VAL SER PRO GLU PRO ASP PHE ILE GLY ALA SER SEQRES 5 B 620 SER THR PHE THR ARG ALA VAL SER HIS PHE SER LEU GLY SEQRES 6 B 620 GLU ARG GLY ILE LEU VAL ARG LEU ARG THR LEU ASP GLY SEQRES 7 B 620 VAL TYR GLU GLU LYS LEU SER PHE TYR ASN THR SER GLU SEQRES 8 B 620 GLU SER LEU GLY VAL LYS VAL ARG TYR SER TYR GLU ALA SEQRES 9 B 620 PRO ILE GLU ASP ILE PHE GLN VAL ARG GLY PHE MET GLY SEQRES 10 B 620 LEU LYS SER GLY LYS ALA ILE ALA PRO ALA GLY GLY THR SEQRES 11 B 620 HIS VAL LYS GLU SER PRO SER GLY ARG ARG SER LEU SER SEQRES 12 B 620 ILE GLU THR ASN MET GLU ARG GLU GLY SER LEU LEU ARG SEQRES 13 B 620 ALA GLU LEU GLU ILE PRO PRO LEU GLY LYS ALA VAL LEU SEQRES 14 B 620 TYR VAL ARG PHE ILE PRO LYS ILE GLU GLY SER ILE SER SEQRES 15 B 620 GLU ILE LEU GLY GLU LYS ARG LYS THR ILE LYS ASN VAL SEQRES 16 B 620 ALA PHE THR GLY SER PRO ALA ILE ASP GLY ILE PHE GLU SEQRES 17 B 620 ARG ALA VAL GLU ASN ILE ASN ALA LEU THR LEU PHE THR SEQRES 18 B 620 ARG PHE GLY PRO VAL PRO LEU ALA GLY ILE PRO TYR PHE SEQRES 19 B 620 ALA CYS PRO PHE GLY ARG ASP ALA ILE ILE ALA SER LEU SEQRES 20 B 620 PHE LEU LEU PRO TYR TYR PRO GLU TYR ALA ALA GLY THR SEQRES 21 B 620 LEU ARG LEU PHE GLY ARG LEU GLN GLY LYS ARG THR ASN SEQRES 22 B 620 PRO LYS ASN GLU GLU GLU PRO GLY LYS ILE PRO HIS GLU SEQRES 23 B 620 PHE ARG LEU GLY GLU LEU ALA GLN SER GLY LYS VAL PRO SEQRES 24 B 620 PHE ALA PRO TYR TYR GLY THR VAL ASP ALA THR PRO LEU SEQRES 25 B 620 TYR VAL ALA LEU ALA GLY GLU TYR LEU ARG TRP THR GLY SEQRES 26 B 620 ASP ARG LYS LEU ILE GLU GLU LEU ARG PRO ASN LEU THR SEQRES 27 B 620 ALA ALA VAL GLU TRP ILE LEU LYS LYS LEU ASP ASP GLY SEQRES 28 B 620 TYR ILE THR TYR VAL PRO GLY ILE LEU GLY ASN LYS GLY SEQRES 29 B 620 TRP LYS ASP SER ARG ASP GLY ILE ILE ASP GLU GLU GLY SEQRES 30 B 620 LYS ILE PRO LYS PRO PRO ILE ALA LEU VAL GLU VAL GLN SEQRES 31 B 620 GLY TYR THR TYR TRP ALA LEU LYS LEU ALA GLY GLU LEU SEQRES 32 B 620 SER LEU THR ASP LEU ASP GLU LYS THR LEU LEU ALA GLU SEQRES 33 B 620 ALA GLU LYS LEU LYS LYS ARG PHE ASN ARG ASP PHE TRP SEQRES 34 B 620 LEU GLY SER TYR TYR ALA LEU ALA LEU ASP GLY GLU GLY SEQRES 35 B 620 ARG PRO LEU ARG VAL VAL SER SER ASN MET GLY HIS LEU SEQRES 36 B 620 LEU LEU THR GLY ILE ALA GLU HIS GLU GLU GLU LEU ALA SEQRES 37 B 620 GLU ARG LEU PHE ARG PRO ASP MET PHE SER ARG TYR GLY SEQRES 38 B 620 ILE ARG THR LEU SER ALA LYS GLU LYS ALA TYR ASN PRO SEQRES 39 B 620 PHE SER TYR HIS ARG GLY SER VAL TRP PRO HIS ASP ASN SEQRES 40 B 620 ALA LEU ILE ALA LEU GLY LEU ALA ARG ILE GLY ARG THR SEQRES 41 B 620 ASP MET ALA LYS ALA LEU MET ASP ALA VAL PHE ASP ALA SEQRES 42 B 620 ALA LYS LEU LEU PRO GLU ARG GLU LEU PRO GLU LEU TYR SEQRES 43 B 620 SER GLY LEU ASN GLU LEU VAL PRO VAL PRO ARG ALA ASN SEQRES 44 B 620 SER PRO GLN ALA TRP SER SER ALA SER VAL PHE ALA PHE SEQRES 45 B 620 VAL THR ALA SER LEU GLY MET GLU ALA GLY ASP GLU LEU SEQRES 46 B 620 THR VAL ARG PRO ALA GLU GLY THR SER ILE VAL LEU ARG SEQRES 47 B 620 GLY VAL SER PHE GLY GLY ARG ARG TYR VAL VAL VAL VAL SEQRES 48 B 620 ASN GLY GLY VAL SER VAL GLU PRO LEU FORMUL 3 HOH *14(H2 O) HELIX 1 AA1 ASP A 108 GLY A 114 1 7 HELIX 2 AA2 PHE A 115 LEU A 118 5 4 HELIX 3 AA3 SER A 200 LEU A 217 1 18 HELIX 4 AA4 PHE A 238 LEU A 249 1 12 HELIX 5 AA5 TYR A 253 GLU A 255 5 3 HELIX 6 AA6 TYR A 256 LEU A 267 1 12 HELIX 7 AA7 GLY A 290 SER A 295 1 6 HELIX 8 AA8 ASP A 308 GLY A 325 1 18 HELIX 9 AA9 ASP A 326 LEU A 333 1 8 HELIX 10 AB1 LEU A 333 LEU A 348 1 16 HELIX 11 AB2 VAL A 387 LEU A 403 1 17 HELIX 12 AB3 ASP A 409 TRP A 429 1 21 HELIX 13 AB4 SER A 449 LEU A 456 5 8 HELIX 14 AB5 HIS A 463 PHE A 472 1 10 HELIX 15 AB6 TRP A 503 ILE A 517 1 15 HELIX 16 AB7 ARG A 519 LEU A 536 1 18 HELIX 17 AB8 LEU A 537 GLU A 541 5 5 HELIX 18 AB9 GLN A 562 LEU A 577 1 16 HELIX 19 AC1 ILE B 109 ARG B 113 1 5 HELIX 20 AC2 GLY B 114 LEU B 118 5 5 HELIX 21 AC3 SER B 200 LEU B 217 1 18 HELIX 22 AC4 PHE B 238 LEU B 249 1 12 HELIX 23 AC5 PRO B 254 LEU B 267 1 14 HELIX 24 AC6 GLY B 290 SER B 295 1 6 HELIX 25 AC7 ASP B 308 GLY B 325 1 18 HELIX 26 AC8 ASP B 326 LEU B 333 1 8 HELIX 27 AC9 LEU B 333 LEU B 348 1 16 HELIX 28 AD1 ASP B 349 GLY B 351 5 3 HELIX 29 AD2 VAL B 387 LEU B 403 1 17 HELIX 30 AD3 ASP B 409 TRP B 429 1 21 HELIX 31 AD4 SER B 450 GLY B 453 5 4 HELIX 32 AD5 HIS B 454 GLY B 459 1 6 HELIX 33 AD6 HIS B 463 LEU B 471 1 9 HELIX 34 AD7 TRP B 503 ILE B 517 1 15 HELIX 35 AD8 ARG B 519 LEU B 537 1 19 HELIX 36 AD9 PRO B 538 GLU B 541 5 4 HELIX 37 AE1 GLN B 562 ALA B 567 1 6 HELIX 38 AE2 ALA B 567 LEU B 577 1 11 SHEET 1 AA1 7 THR A 3 GLY A 7 0 SHEET 2 AA1 7 ALA A 10 SER A 14 -1 O VAL A 12 N LEU A 5 SHEET 3 AA1 7 GLY A 26 PHE A 29 -1 O TYR A 28 N PHE A 11 SHEET 4 AA1 7 THR A 32 SER A 43 -1 O PHE A 34 N PHE A 27 SHEET 5 AA1 7 LEU A 94 GLU A 103 -1 O SER A 101 N ARG A 39 SHEET 6 AA1 7 LEU A 154 ILE A 161 -1 O ALA A 157 N VAL A 98 SHEET 7 AA1 7 GLU A 149 GLU A 151 -1 N GLU A 151 O LEU A 154 SHEET 1 AA2 7 ASP A 47 SER A 53 0 SHEET 2 AA2 7 ARG A 57 SER A 63 -1 O HIS A 61 N GLY A 50 SHEET 3 AA2 7 GLY A 68 LEU A 76 -1 O LEU A 70 N PHE A 62 SHEET 4 AA2 7 TYR A 80 ASN A 88 -1 O TYR A 87 N ILE A 69 SHEET 5 AA2 7 LYS A 166 ILE A 177 -1 O ALA A 167 N PHE A 86 SHEET 6 AA2 7 GLY A 138 THR A 146 -1 N SER A 143 O ILE A 174 SHEET 7 AA2 7 THR A 130 SER A 135 -1 N HIS A 131 O LEU A 142 SHEET 1 AA3 4 ALA A 196 PHE A 197 0 SHEET 2 AA3 4 ILE A 595 PHE A 602 -1 O VAL A 596 N PHE A 197 SHEET 3 AA3 4 ARG A 605 VAL A 611 -1 O VAL A 611 N ILE A 595 SHEET 4 AA3 4 VAL A 615 PRO A 619 -1 O GLU A 618 N VAL A 608 SHEET 1 AA4 2 THR A 218 PHE A 220 0 SHEET 2 AA4 2 PRO A 225 PRO A 227 -1 O VAL A 226 N LEU A 219 SHEET 1 AA5 2 ALA A 385 LEU A 386 0 SHEET 2 AA5 2 ALA A 437 LEU A 438 -1 O LEU A 438 N ALA A 385 SHEET 1 AA6 2 PHE A 477 SER A 478 0 SHEET 2 AA6 2 GLY A 481 ILE A 482 -1 O GLY A 481 N SER A 478 SHEET 1 AA7 2 GLU A 580 ALA A 581 0 SHEET 2 AA7 2 LEU A 585 THR A 586 -1 O THR A 586 N GLU A 580 SHEET 1 AA8 5 THR B 3 GLY B 7 0 SHEET 2 AA8 5 ALA B 10 SER B 14 -1 O VAL B 12 N LEU B 5 SHEET 3 AA8 5 GLY B 26 PHE B 29 -1 O TYR B 28 N PHE B 11 SHEET 4 AA8 5 THR B 32 SER B 43 -1 O PHE B 34 N PHE B 27 SHEET 5 AA8 5 GLU B 107 ASP B 108 -1 O GLU B 107 N ARG B 33 SHEET 1 AA9 7 THR B 3 GLY B 7 0 SHEET 2 AA9 7 ALA B 10 SER B 14 -1 O VAL B 12 N LEU B 5 SHEET 3 AA9 7 GLY B 26 PHE B 29 -1 O TYR B 28 N PHE B 11 SHEET 4 AA9 7 THR B 32 SER B 43 -1 O PHE B 34 N PHE B 27 SHEET 5 AA9 7 LEU B 94 GLU B 103 -1 O LYS B 97 N SER B 43 SHEET 6 AA9 7 LEU B 154 ILE B 161 -1 O LEU B 155 N TYR B 100 SHEET 7 AA9 7 GLU B 149 ARG B 150 -1 N GLU B 149 O ARG B 156 SHEET 1 AB1 7 ASP B 47 SER B 53 0 SHEET 2 AB1 7 ARG B 57 LEU B 64 -1 O HIS B 61 N GLY B 50 SHEET 3 AB1 7 GLY B 68 LEU B 76 -1 O LEU B 70 N PHE B 62 SHEET 4 AB1 7 TYR B 80 ASN B 88 -1 O LYS B 83 N LEU B 73 SHEET 5 AB1 7 LYS B 166 ILE B 177 -1 O PHE B 173 N TYR B 80 SHEET 6 AB1 7 ARG B 140 THR B 146 -1 N GLU B 145 O ARG B 172 SHEET 7 AB1 7 THR B 130 LYS B 133 -1 N HIS B 131 O LEU B 142 SHEET 1 AB2 4 ALA B 196 PHE B 197 0 SHEET 2 AB2 4 SER B 594 PHE B 602 -1 O VAL B 596 N PHE B 197 SHEET 3 AB2 4 ARG B 605 ASN B 612 -1 O VAL B 609 N LEU B 597 SHEET 4 AB2 4 VAL B 615 PRO B 619 -1 O SER B 616 N VAL B 610 SHEET 1 AB3 2 THR B 218 THR B 221 0 SHEET 2 AB3 2 GLY B 224 PRO B 227 -1 O GLY B 224 N THR B 221 SHEET 1 AB4 2 ALA B 385 LEU B 386 0 SHEET 2 AB4 2 ALA B 437 LEU B 438 -1 O LEU B 438 N ALA B 385 SHEET 1 AB5 2 GLU B 580 ALA B 581 0 SHEET 2 AB5 2 LEU B 585 THR B 586 -1 O THR B 586 N GLU B 580 CISPEP 1 SER A 43 PRO A 44 0 2.92 CISPEP 2 ALA A 301 PRO A 302 0 0.68 CISPEP 3 PRO A 382 PRO A 383 0 -4.68 CISPEP 4 SER A 560 PRO A 561 0 -0.42 CISPEP 5 SER B 43 PRO B 44 0 1.44 CISPEP 6 ILE B 231 PRO B 232 0 -3.09 CISPEP 7 ALA B 301 PRO B 302 0 0.50 CISPEP 8 PRO B 382 PRO B 383 0 2.01 CISPEP 9 SER B 560 PRO B 561 0 11.37 CRYST1 108.087 108.087 225.199 90.00 90.00 90.00 I 41 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009252 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009252 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004441 0.00000