HEADER VIRAL PROTEIN 10-OCT-21 7VNB TITLE CRYSTAL STRUCTURE OF THE SARS-COV-2 RBD IN COMPLEX WITH A HUMAN SINGLE TITLE 2 DOMAIN ANTIBODY N3113 COMPND MOL_ID: 1; COMPND 2 MOLECULE: N3113; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SPIKE PROTEIN S1; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 8 2; SOURCE 9 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 10 ORGANISM_TAXID: 2697049; SOURCE 11 GENE: S, 2; SOURCE 12 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS SARS-COV-2, NANOBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.YANG,Y.WANG,Y.KONG,Y.JIN,Y.WU,T.YING REVDAT 2 29-NOV-23 7VNB 1 REMARK REVDAT 1 24-NOV-21 7VNB 0 JRNL AUTH Z.YANG,Y.WANG,Y.JIN,Y.ZHU,Y.WU,C.LI,Y.KONG,W.SONG,X.TIAN, JRNL AUTH 2 W.ZHAN,A.HUANG,S.ZHOU,S.XIA,X.TIAN,C.PENG,C.CHEN,Y.SHI,G.HU, JRNL AUTH 3 S.DU,Y.WANG,Y.XIE,S.JIANG,L.LU,L.SUN,Y.SONG,T.YING JRNL TITL A NON-ACE2 COMPETING HUMAN SINGLE-DOMAIN ANTIBODY CONFERS JRNL TITL 2 BROAD NEUTRALIZATION AGAINST SARS-COV-2 AND CIRCULATING JRNL TITL 3 VARIANTS. JRNL REF SIGNAL TRANSDUCT TARGET THER V. 6 378 2021 JRNL REFN ESSN 2059-3635 JRNL PMID 34732694 JRNL DOI 10.1038/S41392-021-00810-1 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 34237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.5300 - 5.4700 0.99 2300 130 0.1807 0.2039 REMARK 3 2 5.4700 - 4.3400 1.00 2320 128 0.1337 0.1401 REMARK 3 3 4.3400 - 3.7900 1.00 2285 175 0.1288 0.1614 REMARK 3 4 3.7900 - 3.4500 1.00 2262 184 0.1465 0.1796 REMARK 3 5 3.4500 - 3.2000 1.00 2293 136 0.1657 0.1984 REMARK 3 6 3.2000 - 3.0100 1.00 2342 116 0.1870 0.2132 REMARK 3 7 3.0100 - 2.8600 1.00 2343 117 0.1931 0.2322 REMARK 3 8 2.8600 - 2.7400 1.00 2275 161 0.2045 0.2497 REMARK 3 9 2.7400 - 2.6300 1.00 2285 147 0.2167 0.2598 REMARK 3 10 2.6300 - 2.5400 1.00 2329 155 0.2355 0.3200 REMARK 3 11 2.5400 - 2.4600 1.00 2302 148 0.2400 0.2396 REMARK 3 12 2.4600 - 2.3900 1.00 2245 151 0.2556 0.2836 REMARK 3 13 2.3900 - 2.3300 1.00 2332 117 0.2681 0.3531 REMARK 3 14 2.3300 - 2.2700 1.00 2350 109 0.2811 0.2811 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.266 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.907 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2683 REMARK 3 ANGLE : 0.954 3646 REMARK 3 CHIRALITY : 0.056 389 REMARK 3 PLANARITY : 0.005 472 REMARK 3 DIHEDRAL : 3.684 1552 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VNB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300024969. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34264 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 73.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6LZG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.3M SODIUM CHLORIDE AND 0.1M HEPES, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 73.10500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.20719 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.02667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 73.10500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 42.20719 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.02667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 73.10500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 42.20719 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.02667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 84.41438 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 62.05333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 84.41438 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 62.05333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 84.41438 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 62.05333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 319 REMARK 465 VAL B 320 REMARK 465 GLN B 321 REMARK 465 PRO B 322 REMARK 465 THR B 323 REMARK 465 GLU B 324 REMARK 465 SER B 325 REMARK 465 ILE B 326 REMARK 465 VAL B 327 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 248 O HOH A 263 1.91 REMARK 500 OH TYR B 365 O HOH B 701 1.93 REMARK 500 O HOH A 211 O HOH B 831 1.97 REMARK 500 OD1 ASN A 76 O HOH A 201 2.05 REMARK 500 O PRO A 41 O HOH A 202 2.06 REMARK 500 O HOH A 206 O HOH A 253 2.06 REMARK 500 NZ LYS B 528 O HOH B 702 2.07 REMARK 500 O HOH A 206 O HOH A 230 2.10 REMARK 500 O HOH B 810 O HOH B 859 2.10 REMARK 500 O HOH B 771 O HOH B 808 2.12 REMARK 500 O HOH B 714 O HOH B 824 2.19 REMARK 500 O HOH B 819 O HOH B 871 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 9 C - N - CA ANGL. DEV. = -19.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 117 -175.86 -173.76 REMARK 500 VAL B 341 -60.28 -94.32 REMARK 500 PHE B 377 85.49 -157.83 REMARK 500 ASN B 422 -53.91 -123.35 REMARK 500 ASP B 428 35.69 -91.93 REMARK 500 ASN B 487 17.76 58.53 REMARK 500 PHE B 538 62.08 -108.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 878 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B 879 DISTANCE = 6.70 ANGSTROMS DBREF 7VNB A 1 118 PDB 7VNB 7VNB 1 118 DBREF 7VNB B 319 531 UNP P0DTC2 SPIKE_SARS2 319 531 SEQADV 7VNB GLU B 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB PHE B 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB LEU B 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB GLU B 535 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB VAL B 536 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB LEU B 537 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB PHE B 538 UNP P0DTC2 EXPRESSION TAG SEQADV 7VNB GLN B 539 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 118 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 118 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER ASP SEQRES 3 A 118 PHE SER PHE TYR ASP TYR GLU MET SER TRP VAL ARG GLN SEQRES 4 A 118 ALA PRO GLY LYS ALA LEU GLU TRP ILE GLY SER MET TYR SEQRES 5 A 118 HIS SER GLY ARG THR TYR ILE ASN PRO SER LEU LYS SER SEQRES 6 A 118 LEU VAL THR ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 A 118 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 A 118 MET TYR TYR CYS VAL SER ASN TRP ALA SER GLY SER THR SEQRES 9 A 118 GLY ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 A 118 SER SEQRES 1 B 221 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 B 221 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 B 221 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 B 221 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 B 221 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 B 221 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 B 221 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 8 B 221 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 9 B 221 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 B 221 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 B 221 TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 B 221 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 B 221 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 14 B 221 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 15 B 221 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 B 221 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 B 221 PRO LYS LYS SER THR GLU PHE LEU GLU VAL LEU PHE GLN HET NAG B 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 HOH *245(H2 O) HELIX 1 AA1 ASP A 26 ASP A 31 5 6 HELIX 2 AA2 LEU A 63 SER A 65 5 3 HELIX 3 AA3 ARG A 86 THR A 90 5 5 HELIX 4 AA4 TRP A 99 GLY A 102 5 4 HELIX 5 AA5 PHE B 338 ASN B 343 1 6 HELIX 6 AA6 SER B 349 TRP B 353 5 5 HELIX 7 AA7 ASP B 364 SER B 371 1 8 HELIX 8 AA8 SER B 383 LEU B 387 5 5 HELIX 9 AA9 ASP B 405 ILE B 410 5 6 HELIX 10 AB1 GLY B 416 ASN B 422 1 7 HELIX 11 AB2 SER B 438 SER B 443 1 6 HELIX 12 AB3 GLY B 502 TYR B 505 5 4 HELIX 13 AB4 LEU B 534 PHE B 538 5 5 SHEET 1 AA1 4 LEU A 4 SER A 7 0 SHEET 2 AA1 4 LEU A 18 ALA A 24 -1 O ALA A 23 N VAL A 5 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O LEU A 80 N LEU A 20 SHEET 4 AA1 4 VAL A 67 ASP A 72 -1 N SER A 70 O TYR A 79 SHEET 1 AA2 6 LEU A 11 VAL A 12 0 SHEET 2 AA2 6 THR A 112 VAL A 116 1 O THR A 115 N VAL A 12 SHEET 3 AA2 6 ALA A 91 SER A 97 -1 N TYR A 93 O THR A 112 SHEET 4 AA2 6 GLU A 33 GLN A 39 -1 N VAL A 37 O TYR A 94 SHEET 5 AA2 6 GLU A 46 TYR A 52 -1 O MET A 51 N MET A 34 SHEET 6 AA2 6 THR A 57 ILE A 59 -1 O TYR A 58 N SER A 50 SHEET 1 AA3 4 LEU A 11 VAL A 12 0 SHEET 2 AA3 4 THR A 112 VAL A 116 1 O THR A 115 N VAL A 12 SHEET 3 AA3 4 ALA A 91 SER A 97 -1 N TYR A 93 O THR A 112 SHEET 4 AA3 4 TYR A 107 TRP A 108 -1 O TYR A 107 N SER A 97 SHEET 1 AA4 5 ASN B 354 ILE B 358 0 SHEET 2 AA4 5 ASN B 394 ARG B 403 -1 O VAL B 395 N ILE B 358 SHEET 3 AA4 5 PRO B 507 GLU B 516 -1 O VAL B 512 N ASP B 398 SHEET 4 AA4 5 GLY B 431 ASN B 437 -1 N ILE B 434 O VAL B 511 SHEET 5 AA4 5 THR B 376 TYR B 380 -1 N TYR B 380 O GLY B 431 SHEET 1 AA5 3 CYS B 361 VAL B 362 0 SHEET 2 AA5 3 VAL B 524 CYS B 525 1 O CYS B 525 N CYS B 361 SHEET 3 AA5 3 CYS B 391 PHE B 392 -1 N PHE B 392 O VAL B 524 SHEET 1 AA6 2 LEU B 452 ARG B 454 0 SHEET 2 AA6 2 LEU B 492 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AA7 2 TYR B 473 GLN B 474 0 SHEET 2 AA7 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SSBOND 1 CYS A 22 CYS A 95 1555 1555 2.05 SSBOND 2 CYS B 336 CYS B 361 1555 1555 2.05 SSBOND 3 CYS B 379 CYS B 432 1555 1555 2.09 SSBOND 4 CYS B 391 CYS B 525 1555 1555 2.07 SSBOND 5 CYS B 480 CYS B 488 1555 1555 2.03 LINK ND2 ASN B 343 C1 NAG B 601 1555 1555 1.45 CISPEP 1 ASP A 31 TYR A 32 0 8.80 CRYST1 146.210 146.210 93.080 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006839 0.003949 0.000000 0.00000 SCALE2 0.000000 0.007898 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010743 0.00000