HEADER PROTEIN TRANSPORT 17-OCT-21 7VPS TITLE CRYSTAL STRUCTURE OF THE ARM DOMAIN OF C. GLABRATA IMPORTIN ALPHA COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMPORTIN SUBUNIT ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: [CANDIDA] GLABRATA CBS 138; SOURCE 3 ORGANISM_COMMON: YEAST, TORULOPSIS GLABRATA; SOURCE 4 ORGANISM_TAXID: 284593; SOURCE 5 STRAIN: CBS 138; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHIS2-THR KEYWDS IMPORTIN, NUCLEAR TRANSPORT, PROTEIN SORTING, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR L.TAN,Y.J.IM REVDAT 4 29-NOV-23 7VPS 1 REMARK REVDAT 3 09-NOV-22 7VPS 1 JRNL REVDAT 2 26-OCT-22 7VPS 1 JRNL REVDAT 1 07-SEP-22 7VPS 0 JRNL AUTH L.TAN,L.CHEN,H.YANG,B.JIN,G.KIM,Y.J.IM JRNL TITL STRUCTURAL BASIS FOR ACTIVATION OF FUNGAL STEROL RECEPTOR JRNL TITL 2 UPC2 AND AZOLE RESISTANCE. JRNL REF NAT.CHEM.BIOL. V. 18 1253 2022 JRNL REFN ESSN 1552-4469 JRNL PMID 36229681 JRNL DOI 10.1038/S41589-022-01117-0 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 39783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.3100 - 5.5200 0.93 2699 149 0.1776 0.1984 REMARK 3 2 5.5200 - 4.3800 0.96 2695 142 0.1900 0.1989 REMARK 3 3 4.3800 - 3.8300 0.97 2738 144 0.1807 0.2333 REMARK 3 4 3.8300 - 3.4800 0.97 2714 146 0.2057 0.2491 REMARK 3 5 3.4800 - 3.2300 0.98 2734 147 0.2284 0.2961 REMARK 3 6 3.2300 - 3.0400 0.98 2717 143 0.2399 0.2953 REMARK 3 7 3.0400 - 2.8900 0.98 2740 143 0.2465 0.2766 REMARK 3 8 2.8900 - 2.7600 0.98 2733 144 0.2481 0.3406 REMARK 3 9 2.7600 - 2.6600 0.98 2704 136 0.2328 0.2977 REMARK 3 10 2.6600 - 2.5700 0.97 2724 146 0.2430 0.3122 REMARK 3 11 2.5700 - 2.4800 0.98 2679 140 0.2434 0.3385 REMARK 3 12 2.4800 - 2.4100 0.97 2714 148 0.2579 0.3195 REMARK 3 13 2.4100 - 2.3500 0.96 2661 145 0.2610 0.3324 REMARK 3 14 2.3500 - 2.2900 0.92 2523 135 0.2568 0.3126 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.285 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.271 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6896 REMARK 3 ANGLE : 1.594 9378 REMARK 3 CHIRALITY : 0.076 1111 REMARK 3 PLANARITY : 0.012 1215 REMARK 3 DIHEDRAL : 7.079 4238 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300025146. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39813 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XGR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 7.0, 30% PEG 8000, REMARK 280 0.4 M NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.31400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 70 REMARK 465 SER A 71 REMARK 465 ALA A 72 REMARK 465 MET A 73 REMARK 465 GLY A 74 REMARK 465 ASP A 514 REMARK 465 ASP A 515 REMARK 465 THR A 516 REMARK 465 GLY B 70 REMARK 465 SER B 71 REMARK 465 ALA B 72 REMARK 465 MET B 73 REMARK 465 GLY B 74 REMARK 465 SER B 75 REMARK 465 ASP B 514 REMARK 465 ASP B 515 REMARK 465 THR B 516 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 465 O HOH A 601 1.59 REMARK 500 OE1 GLN A 378 NH2 ARG A 418 1.81 REMARK 500 OG SER A 310 O HOH A 602 1.86 REMARK 500 O HOH A 687 O HOH A 715 1.92 REMARK 500 O HOH B 610 O HOH B 728 2.00 REMARK 500 O HOH A 735 O HOH A 737 2.00 REMARK 500 NH1 ARG A 209 O ARG A 245 2.01 REMARK 500 O HOH A 669 O HOH A 710 2.01 REMARK 500 ND2 ASN B 141 O HOH B 601 2.03 REMARK 500 OG SER B 413 O HOH B 602 2.06 REMARK 500 OE1 GLU A 461 NZ LYS A 464 2.08 REMARK 500 O HOH B 616 O HOH B 685 2.08 REMARK 500 OD2 ASP B 277 O HOH B 603 2.08 REMARK 500 O TYR A 284 O HOH A 603 2.09 REMARK 500 O GLU B 119 O HOH B 604 2.10 REMARK 500 O HOH A 715 O HOH A 721 2.10 REMARK 500 O LYS B 258 O HOH B 605 2.10 REMARK 500 OG SER A 352 O HOH A 604 2.12 REMARK 500 OH TYR A 184 O HOH A 605 2.13 REMARK 500 OE1 GLN A 336 O HOH A 606 2.13 REMARK 500 O HOH B 622 O HOH B 678 2.13 REMARK 500 O HOH A 624 O HOH A 745 2.14 REMARK 500 NH1 ARG A 348 O ASN A 384 2.15 REMARK 500 O HOH A 750 O HOH B 723 2.15 REMARK 500 OE1 GLU B 361 O HOH B 606 2.17 REMARK 500 O HOH A 676 O HOH A 743 2.17 REMARK 500 NE2 GLN A 250 O HOH A 603 2.17 REMARK 500 OE1 GLN B 492 O HOH B 607 2.18 REMARK 500 O HOH B 716 O HOH B 730 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N GLY B 131 NH2 ARG B 423 1445 0.67 REMARK 500 CA GLY B 131 NH1 ARG B 423 1445 1.00 REMARK 500 CA GLY B 131 CZ ARG B 423 1445 1.06 REMARK 500 CA GLY A 131 NH2 ARG A 423 1465 1.10 REMARK 500 C SER B 130 NH2 ARG B 423 1445 1.34 REMARK 500 N GLY A 131 NH2 ARG A 423 1465 1.36 REMARK 500 O SER A 130 NH1 ARG A 423 1465 1.38 REMARK 500 CA GLY B 131 NH2 ARG B 423 1445 1.39 REMARK 500 C GLY B 131 NH1 ARG B 423 1445 1.39 REMARK 500 C SER A 130 NH1 ARG A 423 1465 1.57 REMARK 500 OE1 GLN B 214 NE2 GLN B 312 1455 1.61 REMARK 500 O GLY B 131 NH1 ARG B 423 1445 1.63 REMARK 500 NE2 GLN B 129 OE2 GLU B 473 1445 1.65 REMARK 500 N GLY B 131 CZ ARG B 423 1445 1.77 REMARK 500 OE1 GLN A 80 NH2 ARG A 497 1565 1.95 REMARK 500 CA GLY A 131 CZ ARG A 423 1465 1.98 REMARK 500 O HOH A 742 O HOH B 739 1655 1.99 REMARK 500 O HOH A 722 O HOH B 754 1655 2.01 REMARK 500 O SER B 130 NH2 ARG B 423 1445 2.03 REMARK 500 C SER A 130 CZ ARG A 423 1465 2.13 REMARK 500 N GLY A 131 CZ ARG A 423 1465 2.13 REMARK 500 O HOH B 715 O HOH B 717 1445 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B 423 CZ ARG B 423 NH2 -0.083 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 414 N - CA - C ANGL. DEV. = -17.2 DEGREES REMARK 500 ARG A 423 CG - CD - NE ANGL. DEV. = -22.7 DEGREES REMARK 500 ARG A 497 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 LYS B 248 N - CA - C ANGL. DEV. = -20.7 DEGREES REMARK 500 GLN B 312 O - C - N ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG B 423 CG - CD - NE ANGL. DEV. = -19.1 DEGREES REMARK 500 ARG B 497 CB - CG - CD ANGL. DEV. = -18.6 DEGREES REMARK 500 ARG B 497 CG - CD - NE ANGL. DEV. = 12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 121 76.83 36.01 REMARK 500 THR A 163 152.14 -46.66 REMARK 500 ASP A 252 106.58 -50.69 REMARK 500 ARG A 300 49.72 25.89 REMARK 500 LEU A 416 -70.98 -32.79 REMARK 500 ARG A 418 78.26 -117.17 REMARK 500 ASN A 495 109.39 -56.98 REMARK 500 HIS B 120 -85.63 104.64 REMARK 500 LYS B 248 -111.49 172.83 REMARK 500 ASP B 252 105.08 -43.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 248 PRO A 249 137.26 REMARK 500 LEU B 469 ALA B 470 -141.75 REMARK 500 ALA B 470 ILE B 471 141.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN A 129 -11.63 REMARK 500 CYS A 430 12.45 REMARK 500 LEU A 437 10.73 REMARK 500 GLU A 439 12.10 REMARK 500 GLN B 129 -11.96 REMARK 500 GLN B 312 -11.29 REMARK 500 VAL B 316 10.19 REMARK 500 LEU B 437 12.32 REMARK 500 REMARK 500 REMARK: NULL DBREF 7VPS A 75 516 UNP Q6FNI4 Q6FNI4_CANGA 75 516 DBREF 7VPS B 75 516 UNP Q6FNI4 Q6FNI4_CANGA 75 516 SEQADV 7VPS GLY A 70 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS SER A 71 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS ALA A 72 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS MET A 73 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS GLY A 74 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS GLY B 70 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS SER B 71 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS ALA B 72 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS MET B 73 UNP Q6FNI4 EXPRESSION TAG SEQADV 7VPS GLY B 74 UNP Q6FNI4 EXPRESSION TAG SEQRES 1 A 447 GLY SER ALA MET GLY SER SER ALA ALA ASP GLN GLN PHE SEQRES 2 A 447 TYR GLY GLN LEU GLN GLN GLU LEU PRO GLN MET VAL GLN SEQRES 3 A 447 GLN ILE ASN SER SER ASP MET GLN GLU GLN LEU ALA ALA SEQRES 4 A 447 THR VAL LYS PHE ARG GLN ILE LEU SER ARG GLU HIS ASN SEQRES 5 A 447 PRO PRO ILE ASP ILE VAL ILE GLN SER GLY VAL VAL PRO SEQRES 6 A 447 THR LEU VAL ASN PHE MET ASN GLU ASN GLN PRO GLU MET SEQRES 7 A 447 LEU GLN LEU GLU ALA ALA TRP ALA LEU THR ASN ILE ALA SEQRES 8 A 447 SER GLY THR SER ALA GLN THR GLN VAL VAL VAL ASP ALA SEQRES 9 A 447 GLY ALA VAL PRO LEU PHE ILE GLN LEU LEU TYR THR GLY SEQRES 10 A 447 SER VAL GLU LEU GLN GLU GLN ALA ILE TRP ALA LEU GLY SEQRES 11 A 447 ASN VAL ALA GLY ASP SER THR SER TYR ARG ASP TYR VAL SEQRES 12 A 447 LEU GLN CYS SER ALA MET GLU PRO ILE LEU SER LEU PHE SEQRES 13 A 447 ASN SER GLU LYS VAL THR LEU ILE ARG THR ALA THR TRP SEQRES 14 A 447 THR LEU SER ASN LEU CYS ARG GLY LYS LYS PRO GLN PRO SEQRES 15 A 447 ASP TRP SER ILE VAL SER LYS ALA LEU PRO THR LEU ALA SEQRES 16 A 447 LYS LEU ILE TYR SER PHE ASP ASN GLU THR LEU ILE ASP SEQRES 17 A 447 ALA CYS TRP ALA ILE SER TYR LEU SER ASP GLY PRO ALA SEQRES 18 A 447 GLU ALA ILE GLN ALA VAL ILE ASP ALA ARG ILE PRO LYS SEQRES 19 A 447 ARG LEU VAL GLU LEU LEU SER HIS GLN SER THR LEU VAL SEQRES 20 A 447 GLN THR PRO ALA LEU ARG ALA VAL GLY ASN ILE VAL THR SEQRES 21 A 447 GLY ASN ASP LEU HIS THR GLN VAL VAL ILE ASN CYS GLY SEQRES 22 A 447 VAL LEU SER ALA LEU ARG ASN LEU LEU SER SER PRO LYS SEQRES 23 A 447 GLU SER ILE ARG LYS GLU ALA CYS TRP THR ILE SER ASN SEQRES 24 A 447 ILE THR ALA GLY ASN THR GLU GLN ILE GLN ALA VAL VAL SEQRES 25 A 447 ASP ALA ASN LEU ILE PRO PRO LEU ILE LYS LEU LEU GLU SEQRES 26 A 447 THR ALA GLU TYR LYS ILE LYS LYS GLU ALA CYS TRP ALA SEQRES 27 A 447 ILE SER ASN ALA SER SER GLY GLY LEU GLN ARG PRO GLU SEQRES 28 A 447 ILE ILE ARG TYR MET VAL SER GLN GLY CYS ILE LYS PRO SEQRES 29 A 447 LEU CYS ASP LEU LEU GLU ILE ALA ASP ASN ARG ILE ILE SEQRES 30 A 447 GLU VAL THR LEU ASP ALA LEU GLU ASN ILE LEU LYS MET SEQRES 31 A 447 GLY GLU THR ASP LYS GLU ALA ARG GLY LEU ALA ILE ASN SEQRES 32 A 447 GLU ASN ALA ASP LEU ILE GLU LYS ALA GLY GLY MET GLU SEQRES 33 A 447 LYS ILE PHE ASN CYS GLN GLN ASN GLU ASN ASP ARG ILE SEQRES 34 A 447 TYR GLU LYS ALA TYR LYS ILE ILE GLU THR TYR PHE GLY SEQRES 35 A 447 GLU GLU ASP ASP THR SEQRES 1 B 447 GLY SER ALA MET GLY SER SER ALA ALA ASP GLN GLN PHE SEQRES 2 B 447 TYR GLY GLN LEU GLN GLN GLU LEU PRO GLN MET VAL GLN SEQRES 3 B 447 GLN ILE ASN SER SER ASP MET GLN GLU GLN LEU ALA ALA SEQRES 4 B 447 THR VAL LYS PHE ARG GLN ILE LEU SER ARG GLU HIS ASN SEQRES 5 B 447 PRO PRO ILE ASP ILE VAL ILE GLN SER GLY VAL VAL PRO SEQRES 6 B 447 THR LEU VAL ASN PHE MET ASN GLU ASN GLN PRO GLU MET SEQRES 7 B 447 LEU GLN LEU GLU ALA ALA TRP ALA LEU THR ASN ILE ALA SEQRES 8 B 447 SER GLY THR SER ALA GLN THR GLN VAL VAL VAL ASP ALA SEQRES 9 B 447 GLY ALA VAL PRO LEU PHE ILE GLN LEU LEU TYR THR GLY SEQRES 10 B 447 SER VAL GLU LEU GLN GLU GLN ALA ILE TRP ALA LEU GLY SEQRES 11 B 447 ASN VAL ALA GLY ASP SER THR SER TYR ARG ASP TYR VAL SEQRES 12 B 447 LEU GLN CYS SER ALA MET GLU PRO ILE LEU SER LEU PHE SEQRES 13 B 447 ASN SER GLU LYS VAL THR LEU ILE ARG THR ALA THR TRP SEQRES 14 B 447 THR LEU SER ASN LEU CYS ARG GLY LYS LYS PRO GLN PRO SEQRES 15 B 447 ASP TRP SER ILE VAL SER LYS ALA LEU PRO THR LEU ALA SEQRES 16 B 447 LYS LEU ILE TYR SER PHE ASP ASN GLU THR LEU ILE ASP SEQRES 17 B 447 ALA CYS TRP ALA ILE SER TYR LEU SER ASP GLY PRO ALA SEQRES 18 B 447 GLU ALA ILE GLN ALA VAL ILE ASP ALA ARG ILE PRO LYS SEQRES 19 B 447 ARG LEU VAL GLU LEU LEU SER HIS GLN SER THR LEU VAL SEQRES 20 B 447 GLN THR PRO ALA LEU ARG ALA VAL GLY ASN ILE VAL THR SEQRES 21 B 447 GLY ASN ASP LEU HIS THR GLN VAL VAL ILE ASN CYS GLY SEQRES 22 B 447 VAL LEU SER ALA LEU ARG ASN LEU LEU SER SER PRO LYS SEQRES 23 B 447 GLU SER ILE ARG LYS GLU ALA CYS TRP THR ILE SER ASN SEQRES 24 B 447 ILE THR ALA GLY ASN THR GLU GLN ILE GLN ALA VAL VAL SEQRES 25 B 447 ASP ALA ASN LEU ILE PRO PRO LEU ILE LYS LEU LEU GLU SEQRES 26 B 447 THR ALA GLU TYR LYS ILE LYS LYS GLU ALA CYS TRP ALA SEQRES 27 B 447 ILE SER ASN ALA SER SER GLY GLY LEU GLN ARG PRO GLU SEQRES 28 B 447 ILE ILE ARG TYR MET VAL SER GLN GLY CYS ILE LYS PRO SEQRES 29 B 447 LEU CYS ASP LEU LEU GLU ILE ALA ASP ASN ARG ILE ILE SEQRES 30 B 447 GLU VAL THR LEU ASP ALA LEU GLU ASN ILE LEU LYS MET SEQRES 31 B 447 GLY GLU THR ASP LYS GLU ALA ARG GLY LEU ALA ILE ASN SEQRES 32 B 447 GLU ASN ALA ASP LEU ILE GLU LYS ALA GLY GLY MET GLU SEQRES 33 B 447 LYS ILE PHE ASN CYS GLN GLN ASN GLU ASN ASP ARG ILE SEQRES 34 B 447 TYR GLU LYS ALA TYR LYS ILE ILE GLU THR TYR PHE GLY SEQRES 35 B 447 GLU GLU ASP ASP THR FORMUL 3 HOH *315(H2 O) HELIX 1 AA1 SER A 76 ASN A 98 1 23 HELIX 2 AA2 ASP A 101 SER A 117 1 17 HELIX 3 AA3 PRO A 123 GLY A 131 1 9 HELIX 4 AA4 VAL A 132 PHE A 139 1 8 HELIX 5 AA5 PRO A 145 SER A 161 1 17 HELIX 6 AA6 THR A 163 ALA A 173 1 11 HELIX 7 AA7 GLY A 174 GLY A 186 1 13 HELIX 8 AA8 SER A 187 GLY A 203 1 17 HELIX 9 AA9 SER A 205 CYS A 215 1 11 HELIX 10 AB1 ALA A 217 LEU A 224 1 8 HELIX 11 AB2 PHE A 225 SER A 227 5 3 HELIX 12 AB3 LYS A 229 ARG A 245 1 17 HELIX 13 AB4 ASP A 252 SER A 257 1 6 HELIX 14 AB5 ALA A 259 ILE A 267 1 9 HELIX 15 AB6 ASP A 271 ASP A 287 1 17 HELIX 16 AB7 PRO A 289 ALA A 299 1 11 HELIX 17 AB8 ILE A 301 LEU A 309 1 9 HELIX 18 AB9 SER A 313 THR A 329 1 17 HELIX 19 AC1 ASN A 331 CYS A 341 1 11 HELIX 20 AC2 GLY A 342 LEU A 351 1 10 HELIX 21 AC3 LYS A 355 ALA A 371 1 17 HELIX 22 AC4 ASN A 373 ALA A 383 1 11 HELIX 23 AC5 LEU A 385 ALA A 396 1 12 HELIX 24 AC6 GLU A 397 SER A 413 1 17 HELIX 25 AC7 ARG A 418 GLN A 428 1 11 HELIX 26 AC8 CYS A 430 LEU A 437 1 8 HELIX 27 AC9 ASP A 442 GLY A 468 1 27 HELIX 28 AD1 ASN A 472 ALA A 481 1 10 HELIX 29 AD2 GLY A 483 ASN A 489 1 7 HELIX 30 AD3 CYS A 490 ASN A 493 5 4 HELIX 31 AD4 ASN A 495 PHE A 510 1 16 HELIX 32 AD5 ALA B 77 ASN B 98 1 22 HELIX 33 AD6 ASP B 101 ARG B 118 1 18 HELIX 34 AD7 PRO B 123 GLN B 129 1 7 HELIX 35 AD8 VAL B 132 PHE B 139 1 8 HELIX 36 AD9 PRO B 145 SER B 161 1 17 HELIX 37 AE1 THR B 163 ALA B 173 1 11 HELIX 38 AE2 GLY B 174 GLY B 186 1 13 HELIX 39 AE3 SER B 187 GLY B 203 1 17 HELIX 40 AE4 SER B 205 CYS B 215 1 11 HELIX 41 AE5 ALA B 217 LEU B 224 1 8 HELIX 42 AE6 PHE B 225 SER B 227 5 3 HELIX 43 AE7 LYS B 229 ARG B 245 1 17 HELIX 44 AE8 ASP B 252 SER B 257 1 6 HELIX 45 AE9 ALA B 259 ILE B 267 1 9 HELIX 46 AF1 ASP B 271 SER B 286 1 16 HELIX 47 AF2 PRO B 289 ALA B 299 1 11 HELIX 48 AF3 ILE B 301 LEU B 309 1 9 HELIX 49 AF4 SER B 313 THR B 329 1 17 HELIX 50 AF5 ASN B 331 CYS B 341 1 11 HELIX 51 AF6 GLY B 342 LEU B 351 1 10 HELIX 52 AF7 LYS B 355 ALA B 371 1 17 HELIX 53 AF8 ASN B 373 ALA B 383 1 11 HELIX 54 AF9 LEU B 385 ALA B 396 1 12 HELIX 55 AG1 GLU B 397 SER B 412 1 16 HELIX 56 AG2 ARG B 418 GLN B 428 1 11 HELIX 57 AG3 CYS B 430 LEU B 437 1 8 HELIX 58 AG4 ASP B 442 GLY B 468 1 27 HELIX 59 AG5 ASN B 472 ALA B 481 1 10 HELIX 60 AG6 GLY B 482 ASN B 489 1 8 HELIX 61 AG7 CYS B 490 ASN B 493 5 4 HELIX 62 AG8 ASN B 495 PHE B 510 1 16 CRYST1 47.650 62.628 154.646 90.00 90.02 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020986 0.000000 0.000008 0.00000 SCALE2 0.000000 0.015967 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006466 0.00000