HEADER TRANSFERASE 19-OCT-21 7VQ9 TITLE STRUCTURE OF MA1831 FROM METHANOSARCINA ACETIVORANS IN COMPLEX WITH TITLE 2 FARNESYL THIOPYROPHOSPHATE AND ISOPENTYL S-THIOLODIPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DI-TRANS-POLY-CIS-DECAPRENYLCISTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA ACETIVORANS (STRAIN ATCC 35395 / SOURCE 3 DSM 2834 / JCM 12185 / C2A); SOURCE 4 ORGANISM_TAXID: 188937; SOURCE 5 GENE: UPPS, MA_1831; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS CIS-PRENYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.L.ZHANG,C.C.CHEN,W.D.LIU,J.W.HUANG,X.W.ZHANG,B.B.LIU,R.T.GUO REVDAT 2 29-NOV-23 7VQ9 1 REMARK REVDAT 1 31-AUG-22 7VQ9 0 JRNL AUTH L.ZHANG,X.ZHANG,J.MIN,B.LIU,J.W.HUANG,Y.YANG,W.LIU,L.DAI, JRNL AUTH 2 Y.YANG,C.C.CHEN,R.T.GUO JRNL TITL STRUCTURAL INSIGHTS TO A BI-FUNCTIONAL ISOPRENYL DIPHOSPHATE JRNL TITL 2 SYNTHASE THAT CAN CATALYZE HEAD-TO-TAIL AND HEAD-TO-MIDDLE JRNL TITL 3 CONDENSATION. JRNL REF INT.J.BIOL.MACROMOL. V. 214 492 2022 JRNL REFN ISSN 0141-8130 JRNL PMID 35764165 JRNL DOI 10.1016/J.IJBIOMAC.2022.06.146 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 37927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2052 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.89 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.94 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2114 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE SET COUNT : 127 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3353 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 401 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.90000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : -0.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.116 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.404 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3533 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3336 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4771 ; 1.700 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7710 ; 1.403 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 406 ; 6.217 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 197 ;32.833 ;21.066 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 617 ;15.322 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;21.783 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 428 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3845 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 789 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7VQ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300025192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : LIQUID ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER METALJET REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.34138 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON III REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41757 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 35.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7CAQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM SULFATE, 0.1M TRIS (PH REMARK 280 8.0), 12% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 55.94950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.65400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 55.94950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.65400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 TYR A 4 REMARK 465 PHE A 5 REMARK 465 LEU A 6 REMARK 465 ASP A 7 REMARK 465 PHE A 147 REMARK 465 GLU A 148 REMARK 465 ASN A 149 REMARK 465 SER A 150 REMARK 465 SER A 151 REMARK 465 ASP A 219 REMARK 465 ILE A 220 REMARK 465 THR A 221 REMARK 465 LEU A 222 REMARK 465 GLY A 223 REMARK 465 GLY A 224 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLY B 3 REMARK 465 TYR B 4 REMARK 465 PHE B 5 REMARK 465 LEU B 6 REMARK 465 ASP B 7 REMARK 465 THR B 8 REMARK 465 PHE B 147 REMARK 465 GLU B 148 REMARK 465 ASN B 149 REMARK 465 SER B 150 REMARK 465 SER B 151 REMARK 465 ASP B 152 REMARK 465 SER B 153 REMARK 465 ASP B 219 REMARK 465 ILE B 220 REMARK 465 THR B 221 REMARK 465 LEU B 222 REMARK 465 GLY B 223 REMARK 465 GLY B 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 8 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 96 -168.46 -105.02 REMARK 500 ASN B 107 43.20 -84.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 592 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B 593 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B 594 DISTANCE = 6.58 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 23 OD1 REMARK 620 2 ISY A 301 O7 99.0 REMARK 620 3 FPS A 302 O2A 95.7 90.7 REMARK 620 4 FPS A 302 O1B 83.7 177.1 90.0 REMARK 620 5 HOH A 426 O 87.5 88.8 176.8 90.4 REMARK 620 6 HOH A 447 O 173.3 85.5 89.2 91.7 87.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 23 OD1 REMARK 620 2 ISY B 301 O7 99.8 REMARK 620 3 FPS B 302 O2A 94.7 90.7 REMARK 620 4 FPS B 302 O2B 84.5 175.2 91.1 REMARK 620 5 HOH B 407 O 87.5 86.2 176.5 91.8 REMARK 620 6 HOH B 460 O 174.5 84.1 89.1 91.5 88.9 REMARK 620 N 1 2 3 4 5 DBREF 7VQ9 A 1 224 UNP Q8TPS4 Q8TPS4_METAC 1 224 DBREF 7VQ9 B 1 224 UNP Q8TPS4 Q8TPS4_METAC 1 224 SEQRES 1 A 224 MET GLY GLY TYR PHE LEU ASP THR PRO LYS PHE LYS ARG SEQRES 2 A 224 LEU PRO GLY HIS ILE ALA ILE ILE PRO ASP GLY ASN ARG SEQRES 3 A 224 ARG TRP ALA LEU ASP ARG GLY LEU GLU LYS HIS GLU GLY SEQRES 4 A 224 TYR LYS HIS GLY ILE VAL PRO GLY LEU GLU LEU TYR ASP SEQRES 5 A 224 ILE CYS VAL LYS ILE GLY ILE GLY GLU VAL THR PHE PHE SEQRES 6 A 224 GLY PHE THR GLN ASP ASN THR LYS ARG PRO GLN ILE GLN SEQRES 7 A 224 ARG LYS ALA PHE VAL ASP ALA CYS ILE LYS SER VAL LYS SEQRES 8 A 224 GLU LEU SER LYS HIS ASP ALA GLU LEU LEU VAL VAL GLY SEQRES 9 A 224 ASN THR ASN SER ASP MET PHE PRO LYS GLU LEU LEU ALA SEQRES 10 A 224 TYR THR LYS ARG THR LYS PHE GLY LYS GLY LYS VAL ARG SEQRES 11 A 224 ILE ASN PHE LEU VAL ASN TYR GLY TRP TYR TRP ASP LEU SEQRES 12 A 224 THR TYR ALA PHE GLU ASN SER SER ASP SER LYS LYS MET SEQRES 13 A 224 ILE GLU ASN ILE ALA SER ALA GLU ILE PRO ARG ILE ASP SEQRES 14 A 224 LEU LEU ILE ARG TRP GLY GLY ARG ARG ARG LEU SER GLY SEQRES 15 A 224 MET LEU PRO VAL GLN THR VAL TYR SER ASP ILE TYR VAL SEQRES 16 A 224 VAL ASP GLU MET TRP PRO ASP PHE LYS PRO GLU HIS LEU SEQRES 17 A 224 PHE ASN ALA LEU GLU PHE TYR GLN ASP GLN ASP ILE THR SEQRES 18 A 224 LEU GLY GLY SEQRES 1 B 224 MET GLY GLY TYR PHE LEU ASP THR PRO LYS PHE LYS ARG SEQRES 2 B 224 LEU PRO GLY HIS ILE ALA ILE ILE PRO ASP GLY ASN ARG SEQRES 3 B 224 ARG TRP ALA LEU ASP ARG GLY LEU GLU LYS HIS GLU GLY SEQRES 4 B 224 TYR LYS HIS GLY ILE VAL PRO GLY LEU GLU LEU TYR ASP SEQRES 5 B 224 ILE CYS VAL LYS ILE GLY ILE GLY GLU VAL THR PHE PHE SEQRES 6 B 224 GLY PHE THR GLN ASP ASN THR LYS ARG PRO GLN ILE GLN SEQRES 7 B 224 ARG LYS ALA PHE VAL ASP ALA CYS ILE LYS SER VAL LYS SEQRES 8 B 224 GLU LEU SER LYS HIS ASP ALA GLU LEU LEU VAL VAL GLY SEQRES 9 B 224 ASN THR ASN SER ASP MET PHE PRO LYS GLU LEU LEU ALA SEQRES 10 B 224 TYR THR LYS ARG THR LYS PHE GLY LYS GLY LYS VAL ARG SEQRES 11 B 224 ILE ASN PHE LEU VAL ASN TYR GLY TRP TYR TRP ASP LEU SEQRES 12 B 224 THR TYR ALA PHE GLU ASN SER SER ASP SER LYS LYS MET SEQRES 13 B 224 ILE GLU ASN ILE ALA SER ALA GLU ILE PRO ARG ILE ASP SEQRES 14 B 224 LEU LEU ILE ARG TRP GLY GLY ARG ARG ARG LEU SER GLY SEQRES 15 B 224 MET LEU PRO VAL GLN THR VAL TYR SER ASP ILE TYR VAL SEQRES 16 B 224 VAL ASP GLU MET TRP PRO ASP PHE LYS PRO GLU HIS LEU SEQRES 17 B 224 PHE ASN ALA LEU GLU PHE TYR GLN ASP GLN ASP ILE THR SEQRES 18 B 224 LEU GLY GLY HET ISY A 301 14 HET FPS A 302 24 HET MG A 303 1 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET ISY B 301 14 HET FPS B 302 24 HET MG B 303 1 HET SO4 B 304 5 HETNAM ISY 3-METHYLBUT-3-ENYLSULFANYL(PHOSPHONOOXY)PHOSPHINIC ACID HETNAM FPS S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] HETNAM 2 FPS TRIHYDROGEN THIODIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETSYN ISY ISOPENTYL S-THIOLODIPHOSPHATE HETSYN FPS FARNESYL THIOPYROPHOSPHATE FORMUL 3 ISY 2(C5 H12 O6 P2 S) FORMUL 4 FPS 2(C15 H28 O6 P2 S) FORMUL 5 MG 2(MG 2+) FORMUL 6 SO4 4(O4 S 2-) FORMUL 13 HOH *401(H2 O) HELIX 1 AA1 GLY A 24 ARG A 32 1 9 HELIX 2 AA2 GLU A 35 HIS A 42 5 8 HELIX 3 AA3 GLY A 43 GLY A 58 1 16 HELIX 4 AA4 ASP A 70 ARG A 74 5 5 HELIX 5 AA5 PRO A 75 SER A 94 1 20 HELIX 6 AA6 PRO A 112 LYS A 120 5 9 HELIX 7 AA7 GLY A 138 TYR A 145 1 8 HELIX 8 AA8 SER A 153 ASN A 159 1 7 HELIX 9 AA9 MET A 199 PHE A 203 5 5 HELIX 10 AB1 LYS A 204 GLN A 218 1 15 HELIX 11 AB2 GLY B 24 ARG B 32 1 9 HELIX 12 AB3 GLU B 35 HIS B 42 5 8 HELIX 13 AB4 GLY B 43 GLY B 58 1 16 HELIX 14 AB5 ASP B 70 ARG B 74 5 5 HELIX 15 AB6 PRO B 75 SER B 94 1 20 HELIX 16 AB7 PRO B 112 THR B 119 5 8 HELIX 17 AB8 GLY B 138 TYR B 145 1 8 HELIX 18 AB9 LYS B 155 ASN B 159 1 5 HELIX 19 AC1 MET B 199 PHE B 203 5 5 HELIX 20 AC2 LYS B 204 GLN B 218 1 15 SHEET 1 AA1 7 THR A 122 LYS A 123 0 SHEET 2 AA1 7 ALA A 98 VAL A 103 -1 N LEU A 100 O THR A 122 SHEET 3 AA1 7 VAL A 129 TYR A 137 1 O PHE A 133 N VAL A 103 SHEET 4 AA1 7 GLU A 61 THR A 68 1 N VAL A 62 O ASN A 132 SHEET 5 AA1 7 HIS A 17 PRO A 22 1 N ILE A 20 O THR A 63 SHEET 6 AA1 7 LEU A 170 TRP A 174 1 O ILE A 172 N ALA A 19 SHEET 7 AA1 7 ASP A 192 VAL A 195 1 O ASP A 192 N LEU A 171 SHEET 1 AA2 7 THR B 122 LYS B 123 0 SHEET 2 AA2 7 ALA B 98 VAL B 103 -1 N LEU B 100 O THR B 122 SHEET 3 AA2 7 VAL B 129 TYR B 137 1 O ILE B 131 N GLU B 99 SHEET 4 AA2 7 GLU B 61 THR B 68 1 N PHE B 64 O ASN B 132 SHEET 5 AA2 7 HIS B 17 PRO B 22 1 N ILE B 20 O THR B 63 SHEET 6 AA2 7 LEU B 170 TRP B 174 1 O ILE B 172 N ALA B 19 SHEET 7 AA2 7 ASP B 192 VAL B 195 1 O ASP B 192 N LEU B 171 LINK OD1 ASP A 23 MG MG A 303 1555 1555 2.15 LINK O7 ISY A 301 MG MG A 303 1555 1555 1.92 LINK O2A FPS A 302 MG MG A 303 1555 1555 2.09 LINK O1B FPS A 302 MG MG A 303 1555 1555 2.10 LINK MG MG A 303 O HOH A 426 1555 1555 2.15 LINK MG MG A 303 O HOH A 447 1555 1555 2.02 LINK OD1 ASP B 23 MG MG B 303 1555 1555 2.15 LINK O7 ISY B 301 MG MG B 303 1555 1555 1.98 LINK O2A FPS B 302 MG MG B 303 1555 1555 2.10 LINK O2B FPS B 302 MG MG B 303 1555 1555 2.13 LINK MG MG B 303 O HOH B 407 1555 1555 2.20 LINK MG MG B 303 O HOH B 460 1555 1555 2.10 CRYST1 111.899 81.308 60.023 90.00 103.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008937 0.000000 0.002139 0.00000 SCALE2 0.000000 0.012299 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017131 0.00000