HEADER HYDROLASE 22-OCT-21 7VRG TITLE CRYSTAL STRUCTURE OF CHITINASE-H FROM O. FURNACALIS IN COMPLEX WITH TITLE 2 LYNAMICIN B COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OSTRINIA FURNACALIS; SOURCE 3 ORGANISM_COMMON: ASIAN CORN BORER; SOURCE 4 ORGANISM_TAXID: 93504; SOURCE 5 GENE: OFCHI-H; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII CBS 7435; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 981350 KEYWDS CHITINASE H, O. FURNACALIS, LYNAMICIN B, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.LU,T.LIU,Y.ZHOU,Q.YANG REVDAT 2 29-NOV-23 7VRG 1 REMARK REVDAT 1 02-MAR-22 7VRG 0 JRNL AUTH Q.LU,L.XU,L.LIU,Y.ZHOU,T.LIU,Y.SONG,J.JU,Q.YANG JRNL TITL LYNAMICIN B IS A POTENTIAL PESTICIDE BY ACTING AS A JRNL TITL 2 LEPIDOPTERA-EXCLUSIVE CHITINASE INHIBITOR. JRNL REF J.AGRIC.FOOD CHEM. V. 69 14086 2021 JRNL REFN ESSN 1520-5118 JRNL PMID 34797675 JRNL DOI 10.1021/ACS.JAFC.1C05385 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 108403 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.580 REMARK 3 FREE R VALUE TEST SET COUNT : 3880 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.0300 - 7.2800 0.93 3667 137 0.2107 0.1936 REMARK 3 2 7.2700 - 5.7800 0.94 3697 133 0.2231 0.2127 REMARK 3 3 5.7800 - 5.0500 0.94 3714 140 0.2062 0.2536 REMARK 3 4 5.0500 - 4.5900 0.95 3666 138 0.1856 0.1875 REMARK 3 5 4.5900 - 4.2600 0.95 3794 141 0.1847 0.1820 REMARK 3 6 4.2600 - 4.0100 0.95 3701 139 0.1787 0.2122 REMARK 3 7 4.0100 - 3.8100 0.95 3745 138 0.1945 0.1652 REMARK 3 8 3.8100 - 3.6400 0.95 3758 141 0.2011 0.2079 REMARK 3 9 3.6400 - 3.5000 0.95 3687 135 0.2030 0.2741 REMARK 3 10 3.5000 - 3.3800 0.95 3729 137 0.2190 0.2075 REMARK 3 11 3.3800 - 3.2800 0.96 3755 139 0.2281 0.2235 REMARK 3 12 3.2800 - 3.1800 0.96 3838 141 0.2461 0.2528 REMARK 3 13 3.1800 - 3.1000 0.95 3721 139 0.2477 0.2430 REMARK 3 14 3.1000 - 3.0200 0.96 3765 142 0.2551 0.2365 REMARK 3 15 3.0200 - 2.9600 0.95 3688 138 0.2601 0.2935 REMARK 3 16 2.9500 - 2.8900 0.96 3797 140 0.2786 0.3271 REMARK 3 17 2.8900 - 2.8300 0.96 3715 140 0.2843 0.3046 REMARK 3 18 2.8300 - 2.7800 0.96 3786 137 0.2860 0.2676 REMARK 3 19 2.7800 - 2.7300 0.96 3714 141 0.2873 0.2795 REMARK 3 20 2.7300 - 2.6800 0.96 3851 143 0.2931 0.3473 REMARK 3 21 2.6800 - 2.6400 0.94 3645 135 0.2932 0.2925 REMARK 3 22 2.6400 - 2.6000 0.95 3721 141 0.2946 0.3108 REMARK 3 23 2.6000 - 2.5600 0.95 3733 137 0.2992 0.3252 REMARK 3 24 2.5600 - 2.5300 0.95 3705 137 0.3036 0.3066 REMARK 3 25 2.5300 - 2.4900 0.95 3825 140 0.3082 0.3414 REMARK 3 26 2.4900 - 2.4600 0.95 3713 138 0.3217 0.3819 REMARK 3 27 2.4600 - 2.4300 0.95 3671 133 0.3317 0.3686 REMARK 3 28 2.4300 - 2.4000 0.94 3722 140 0.3298 0.3189 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.313 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 8860 REMARK 3 ANGLE : 0.937 12026 REMARK 3 CHIRALITY : 0.062 1244 REMARK 3 PLANARITY : 0.011 1552 REMARK 3 DIHEDRAL : 18.259 3170 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : CHAIN 'B' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1300025235. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97852 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108457 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 43.034 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14900 REMARK 200 FOR THE DATA SET : 4.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.91000 REMARK 200 FOR SHELL : 0.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5GQB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES PH 7.0, 26% (W/V) REMARK 280 JEFFAMINE ED-2001, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 64 74.58 46.78 REMARK 500 ALA A 88 122.86 59.09 REMARK 500 ASN A 109 -161.82 -128.83 REMARK 500 SER A 116 152.89 -48.20 REMARK 500 GLU A 140 -133.65 60.98 REMARK 500 TYR A 163 -107.39 -99.13 REMARK 500 PHE A 167 78.19 -119.84 REMARK 500 SER A 220 -159.57 -153.80 REMARK 500 LYS A 243 -155.88 -109.77 REMARK 500 ASP A 306 78.66 -114.50 REMARK 500 ALA A 388 7.65 -69.12 REMARK 500 ALA A 398 35.66 -157.14 REMARK 500 ASN A 406 66.79 -157.09 REMARK 500 TRP B 27 -179.37 78.34 REMARK 500 SER B 64 74.71 47.25 REMARK 500 THR B 84 -87.96 -114.41 REMARK 500 ASN B 109 -161.02 -128.07 REMARK 500 SER B 116 151.38 -48.92 REMARK 500 GLU B 140 -133.95 58.90 REMARK 500 TYR B 163 -121.45 -99.66 REMARK 500 LYS B 243 -154.35 -107.72 REMARK 500 ASP B 306 77.38 -113.09 REMARK 500 ALA B 388 6.54 -68.20 REMARK 500 ALA B 398 35.00 -158.88 REMARK 500 ASN B 406 65.88 -157.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 929 DISTANCE = 7.17 ANGSTROMS REMARK 525 HOH B 930 DISTANCE = 7.19 ANGSTROMS DBREF 7VRG A 18 553 UNP Q4AE59 Q4AE59_OSTFU 18 553 DBREF 7VRG B 18 553 UNP Q4AE59 Q4AE59_OSTFU 18 553 SEQADV 7VRG TYR A 14 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG THR A 15 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG LYS A 16 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG PHE A 17 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG TYR B 14 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG THR B 15 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG LYS B 16 UNP Q4AE59 EXPRESSION TAG SEQADV 7VRG PHE B 17 UNP Q4AE59 EXPRESSION TAG SEQRES 1 A 540 TYR THR LYS PHE ALA PRO PRO GLY LYS PRO SER LEU GLY SEQRES 2 A 540 TRP GLY GLU ARG THR PHE ALA ILE VAL GLU VAL ASN GLN SEQRES 3 A 540 ALA ALA THR ALA TYR ASN GLN LEU VAL THR LYS ARG ASP SEQRES 4 A 540 SER ALA ASP VAL SER VAL THR TRP ASN VAL TRP SER GLY SEQRES 5 A 540 ASP PRO ALA ASP LYS ALA ARG VAL LEU LEU ASN ASP LYS SEQRES 6 A 540 GLU PHE TRP SER GLY THR GLY GLY ALA ALA GLY SER ALA SEQRES 7 A 540 SER PHE LYS VAL LYS LYS GLY GLY ARG TYR GLN MET VAL SEQRES 8 A 540 VAL GLU LEU CYS ASN ALA ASP GLY CYS SER GLN SER ASP SEQRES 9 A 540 ALA THR GLU ILE ILE VAL ALA ASP THR ASP GLY SER HIS SEQRES 10 A 540 LEU PRO PRO LEU ASP TYR ASN MET GLY GLU LYS ASN LYS SEQRES 11 A 540 PRO PHE LYS GLN THR SER GLY LYS VAL VAL GLY ALA TYR SEQRES 12 A 540 PHE VAL GLU TRP GLY VAL TYR PRO ARG LYS PHE PRO VAL SEQRES 13 A 540 ASP ARG VAL PRO ILE PRO ASN LEU THR HIS LEU LEU TYR SEQRES 14 A 540 GLY PHE ILE PRO ILE CYS GLY GLY ASP GLY ILE ASN ASP SEQRES 15 A 540 SER LEU LYS GLU ILE GLU GLY SER PHE GLN ALA LEU GLN SEQRES 16 A 540 ARG SER CYS SER GLY ARG GLU ASP PHE LYS VAL SER ILE SEQRES 17 A 540 HIS ASP PRO TRP ALA ALA LEU GLN LYS PRO GLN LYS GLY SEQRES 18 A 540 LEU SER SER TRP ASN GLU PRO TYR LYS GLY ASN PHE GLY SEQRES 19 A 540 GLN LEU MET MET LEU LYS GLN ALA LYS PRO ASP LEU LYS SEQRES 20 A 540 ILE LEU PRO SER ILE GLY GLY TRP THR LEU ALA ASP PRO SEQRES 21 A 540 PHE PHE PHE PHE THR ASP GLU THR LYS ARG ARG ARG PHE SEQRES 22 A 540 VAL ALA SER VAL LYS ASP PHE LEU GLN THR TRP LYS PHE SEQRES 23 A 540 PHE ASP GLY VAL ASP ILE ASP TRP GLU PHE PRO GLY GLY SEQRES 24 A 540 LYS GLY ALA ASN PRO ASN LEU GLY SER PRO LYS ASP GLY SEQRES 25 A 540 GLU ILE TYR VAL LEU LEU MET LYS GLU LEU ARG GLU MET SEQRES 26 A 540 LEU ASN GLU LEU SER ALA GLU THR GLY ARG LYS TYR GLU SEQRES 27 A 540 LEU THR SER ALA ILE SER ALA GLY TRP ASP LYS ILE GLN SEQRES 28 A 540 VAL VAL ASP TYR SER ALA ALA GLN LYS TYR MET ASP HIS SEQRES 29 A 540 ILE PHE PHE MET SER TYR ASP PHE LYS GLY ALA TRP SER SEQRES 30 A 540 ASN ASP THR LEU GLY HIS GLN ALA SER LEU TYR ALA PRO SEQRES 31 A 540 ASP TRP ASN GLU LYS GLU THR TYR THR THR ASP PHE GLY SEQRES 32 A 540 VAL GLN PHE LEU LEU ALA GLN GLY VAL SER PRO LYS LYS SEQRES 33 A 540 ILE VAL VAL GLY VAL ALA MET TYR GLY ARG GLY TRP THR SEQRES 34 A 540 GLY VAL HIS GLY TYR LYS ASP ASN ASN PRO PHE THR GLY SEQRES 35 A 540 ASN ALA THR GLY PRO VAL LYS GLY THR TRP GLN ASP GLY SEQRES 36 A 540 VAL VAL ASP TYR ARG GLU ILE ALA THR GLU ILE ALA GLN SEQRES 37 A 540 GLY LYS TRP GLU TYR HIS TYR ASP LYS VAL ALA GLN ALA SEQRES 38 A 540 PRO TYR VAL PHE ARG PRO ALA THR GLY ASP LEU ILE THR SEQRES 39 A 540 TYR ASP ASP ALA ARG SER THR ILE GLU LYS GLY LYS TYR SEQRES 40 A 540 VAL ARG ALA ASN LYS LEU GLY GLY LEU PHE ALA TRP GLU SEQRES 41 A 540 ILE ASP ALA ASP ASN GLY ASP ILE LEU ASN ALA MET ASN SEQRES 42 A 540 MET GLY LEU GLY ASN SER ALA SEQRES 1 B 540 TYR THR LYS PHE ALA PRO PRO GLY LYS PRO SER LEU GLY SEQRES 2 B 540 TRP GLY GLU ARG THR PHE ALA ILE VAL GLU VAL ASN GLN SEQRES 3 B 540 ALA ALA THR ALA TYR ASN GLN LEU VAL THR LYS ARG ASP SEQRES 4 B 540 SER ALA ASP VAL SER VAL THR TRP ASN VAL TRP SER GLY SEQRES 5 B 540 ASP PRO ALA ASP LYS ALA ARG VAL LEU LEU ASN ASP LYS SEQRES 6 B 540 GLU PHE TRP SER GLY THR GLY GLY ALA ALA GLY SER ALA SEQRES 7 B 540 SER PHE LYS VAL LYS LYS GLY GLY ARG TYR GLN MET VAL SEQRES 8 B 540 VAL GLU LEU CYS ASN ALA ASP GLY CYS SER GLN SER ASP SEQRES 9 B 540 ALA THR GLU ILE ILE VAL ALA ASP THR ASP GLY SER HIS SEQRES 10 B 540 LEU PRO PRO LEU ASP TYR ASN MET GLY GLU LYS ASN LYS SEQRES 11 B 540 PRO PHE LYS GLN THR SER GLY LYS VAL VAL GLY ALA TYR SEQRES 12 B 540 PHE VAL GLU TRP GLY VAL TYR PRO ARG LYS PHE PRO VAL SEQRES 13 B 540 ASP ARG VAL PRO ILE PRO ASN LEU THR HIS LEU LEU TYR SEQRES 14 B 540 GLY PHE ILE PRO ILE CYS GLY GLY ASP GLY ILE ASN ASP SEQRES 15 B 540 SER LEU LYS GLU ILE GLU GLY SER PHE GLN ALA LEU GLN SEQRES 16 B 540 ARG SER CYS SER GLY ARG GLU ASP PHE LYS VAL SER ILE SEQRES 17 B 540 HIS ASP PRO TRP ALA ALA LEU GLN LYS PRO GLN LYS GLY SEQRES 18 B 540 LEU SER SER TRP ASN GLU PRO TYR LYS GLY ASN PHE GLY SEQRES 19 B 540 GLN LEU MET MET LEU LYS GLN ALA LYS PRO ASP LEU LYS SEQRES 20 B 540 ILE LEU PRO SER ILE GLY GLY TRP THR LEU ALA ASP PRO SEQRES 21 B 540 PHE PHE PHE PHE THR ASP GLU THR LYS ARG ARG ARG PHE SEQRES 22 B 540 VAL ALA SER VAL LYS ASP PHE LEU GLN THR TRP LYS PHE SEQRES 23 B 540 PHE ASP GLY VAL ASP ILE ASP TRP GLU PHE PRO GLY GLY SEQRES 24 B 540 LYS GLY ALA ASN PRO ASN LEU GLY SER PRO LYS ASP GLY SEQRES 25 B 540 GLU ILE TYR VAL LEU LEU MET LYS GLU LEU ARG GLU MET SEQRES 26 B 540 LEU ASN GLU LEU SER ALA GLU THR GLY ARG LYS TYR GLU SEQRES 27 B 540 LEU THR SER ALA ILE SER ALA GLY TRP ASP LYS ILE GLN SEQRES 28 B 540 VAL VAL ASP TYR SER ALA ALA GLN LYS TYR MET ASP HIS SEQRES 29 B 540 ILE PHE PHE MET SER TYR ASP PHE LYS GLY ALA TRP SER SEQRES 30 B 540 ASN ASP THR LEU GLY HIS GLN ALA SER LEU TYR ALA PRO SEQRES 31 B 540 ASP TRP ASN GLU LYS GLU THR TYR THR THR ASP PHE GLY SEQRES 32 B 540 VAL GLN PHE LEU LEU ALA GLN GLY VAL SER PRO LYS LYS SEQRES 33 B 540 ILE VAL VAL GLY VAL ALA MET TYR GLY ARG GLY TRP THR SEQRES 34 B 540 GLY VAL HIS GLY TYR LYS ASP ASN ASN PRO PHE THR GLY SEQRES 35 B 540 ASN ALA THR GLY PRO VAL LYS GLY THR TRP GLN ASP GLY SEQRES 36 B 540 VAL VAL ASP TYR ARG GLU ILE ALA THR GLU ILE ALA GLN SEQRES 37 B 540 GLY LYS TRP GLU TYR HIS TYR ASP LYS VAL ALA GLN ALA SEQRES 38 B 540 PRO TYR VAL PHE ARG PRO ALA THR GLY ASP LEU ILE THR SEQRES 39 B 540 TYR ASP ASP ALA ARG SER THR ILE GLU LYS GLY LYS TYR SEQRES 40 B 540 VAL ARG ALA ASN LYS LEU GLY GLY LEU PHE ALA TRP GLU SEQRES 41 B 540 ILE ASP ALA ASP ASN GLY ASP ILE LEU ASN ALA MET ASN SEQRES 42 B 540 MET GLY LEU GLY ASN SER ALA HET NAG L 1 14 HET NAG L 2 14 HET NAG C 1 14 HET NAG C 2 14 HET 7U8 A 601 30 HET NAG A 602 14 HET 7U8 B 601 30 HET NAG B 602 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM 7U8 METHYL 4-[5,6-BIS(CHLORANYL)-1H-INDOL-3-YL]-3-(5- HETNAM 2 7U8 CHLORANYL-1H-INDOL-3-YL)-1H-PYRROLE-2-CARBOXYLATE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN 7U8 LYNAMICIN B FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 5 7U8 2(C22 H14 CL3 N3 O2) FORMUL 9 HOH *432(H2 O) HELIX 1 AA1 ALA A 43 LEU A 47 1 5 HELIX 2 AA2 TRP A 160 TYR A 163 5 4 HELIX 3 AA3 PRO A 168 VAL A 172 5 5 HELIX 4 AA4 PRO A 173 LEU A 177 5 5 HELIX 5 AA5 ASN A 194 ILE A 200 5 7 HELIX 6 AA6 GLY A 202 CYS A 211 1 10 HELIX 7 AA7 ASP A 223 GLN A 229 1 7 HELIX 8 AA8 LYS A 243 LYS A 256 1 14 HELIX 9 AA9 ALA A 271 PHE A 277 5 7 HELIX 10 AB1 ASP A 279 TRP A 297 1 19 HELIX 11 AB2 LYS A 323 GLY A 347 1 25 HELIX 12 AB3 GLY A 359 GLN A 364 1 6 HELIX 13 AB4 ASP A 367 GLN A 372 1 6 HELIX 14 AB5 LYS A 373 MET A 375 5 3 HELIX 15 AB6 PRO A 403 GLU A 407 5 5 HELIX 16 AB7 THR A 412 GLN A 423 1 12 HELIX 17 AB8 SER A 426 LYS A 428 5 3 HELIX 18 AB9 ASN A 451 GLY A 455 5 5 HELIX 19 AC1 TYR A 472 GLN A 481 1 10 HELIX 20 AC2 ASP A 510 ASN A 524 1 15 HELIX 21 AC3 GLU A 533 ASP A 537 5 5 HELIX 22 AC4 GLY A 539 GLY A 550 1 12 HELIX 23 AC5 ALA B 43 LEU B 47 1 5 HELIX 24 AC6 TRP B 160 TYR B 163 5 4 HELIX 25 AC7 PRO B 168 VAL B 172 5 5 HELIX 26 AC8 PRO B 173 LEU B 177 5 5 HELIX 27 AC9 ASN B 194 ILE B 200 5 7 HELIX 28 AD1 GLY B 202 CYS B 211 1 10 HELIX 29 AD2 ASP B 223 GLN B 229 1 7 HELIX 30 AD3 LYS B 243 LYS B 256 1 14 HELIX 31 AD4 ALA B 271 PHE B 277 5 7 HELIX 32 AD5 ASP B 279 TRP B 297 1 19 HELIX 33 AD6 LYS B 323 GLY B 347 1 25 HELIX 34 AD7 GLY B 359 GLN B 364 1 6 HELIX 35 AD8 ASP B 367 GLN B 372 1 6 HELIX 36 AD9 PRO B 403 GLU B 407 5 5 HELIX 37 AE1 THR B 412 ALA B 422 1 11 HELIX 38 AE2 SER B 426 LYS B 428 5 3 HELIX 39 AE3 ASN B 451 GLY B 455 5 5 HELIX 40 AE4 TYR B 472 GLN B 481 1 10 HELIX 41 AE5 ASP B 510 ASN B 524 1 15 HELIX 42 AE6 GLU B 533 ASP B 537 5 5 HELIX 43 AE7 GLY B 539 GLY B 550 1 12 SHEET 1 AA1 3 SER A 24 LEU A 25 0 SHEET 2 AA1 3 ALA A 54 ASN A 61 -1 O ASN A 61 N SER A 24 SHEET 3 AA1 3 GLY A 89 VAL A 95 -1 O VAL A 95 N ALA A 54 SHEET 1 AA2 5 THR A 31 ALA A 33 0 SHEET 2 AA2 5 THR A 119 ALA A 124 1 O ALA A 124 N PHE A 32 SHEET 3 AA2 5 GLY A 99 CYS A 108 -1 N MET A 103 O THR A 119 SHEET 4 AA2 5 LYS A 70 LEU A 75 -1 N ARG A 72 O GLU A 106 SHEET 5 AA2 5 LYS A 78 THR A 84 -1 O LYS A 78 N LEU A 75 SHEET 1 AA3 4 THR A 31 ALA A 33 0 SHEET 2 AA3 4 THR A 119 ALA A 124 1 O ALA A 124 N PHE A 32 SHEET 3 AA3 4 GLY A 99 CYS A 108 -1 N MET A 103 O THR A 119 SHEET 4 AA3 4 CYS A 113 GLN A 115 -1 O SER A 114 N LEU A 107 SHEET 1 AA4 2 VAL A 35 VAL A 37 0 SHEET 2 AA4 2 VAL A 48 LYS A 50 -1 O THR A 49 N GLU A 36 SHEET 1 AA5 9 VAL A 152 VAL A 158 0 SHEET 2 AA5 9 HIS A 179 ILE A 185 1 O LEU A 181 N PHE A 157 SHEET 3 AA5 9 LYS A 260 GLY A 266 1 O SER A 264 N ILE A 185 SHEET 4 AA5 9 GLY A 302 ASP A 306 1 O ASP A 304 N ILE A 265 SHEET 5 AA5 9 GLU A 351 SER A 357 1 O THR A 353 N ILE A 305 SHEET 6 AA5 9 HIS A 377 MET A 381 1 O MET A 381 N ILE A 356 SHEET 7 AA5 9 ILE A 430 ALA A 435 1 O VAL A 431 N ILE A 378 SHEET 8 AA5 9 GLY A 528 TRP A 532 1 O GLY A 528 N VAL A 432 SHEET 9 AA5 9 VAL A 152 VAL A 158 1 N VAL A 152 O LEU A 529 SHEET 1 AA6 3 GLY A 459 PRO A 460 0 SHEET 2 AA6 3 TYR A 437 THR A 442 -1 N THR A 442 O GLY A 459 SHEET 3 AA6 3 VAL A 469 ASP A 471 -1 O VAL A 470 N GLY A 438 SHEET 1 AA7 5 GLY A 459 PRO A 460 0 SHEET 2 AA7 5 TYR A 437 THR A 442 -1 N THR A 442 O GLY A 459 SHEET 3 AA7 5 ASP A 504 THR A 507 -1 O THR A 507 N ARG A 439 SHEET 4 AA7 5 ALA A 494 ARG A 499 -1 N VAL A 497 O ILE A 506 SHEET 5 AA7 5 GLU A 485 ASP A 489 -1 N HIS A 487 O TYR A 496 SHEET 1 AA8 3 SER B 24 GLY B 26 0 SHEET 2 AA8 3 ALA B 54 ASN B 61 -1 O THR B 59 N GLY B 26 SHEET 3 AA8 3 ALA B 88 VAL B 95 -1 O GLY B 89 N TRP B 60 SHEET 1 AA9 5 THR B 31 ALA B 33 0 SHEET 2 AA9 5 THR B 119 ALA B 124 1 O ALA B 124 N PHE B 32 SHEET 3 AA9 5 GLY B 99 CYS B 108 -1 N MET B 103 O THR B 119 SHEET 4 AA9 5 LYS B 70 LEU B 75 -1 N ARG B 72 O GLU B 106 SHEET 5 AA9 5 LYS B 78 GLY B 83 -1 O PHE B 80 N VAL B 73 SHEET 1 AB1 4 THR B 31 ALA B 33 0 SHEET 2 AB1 4 THR B 119 ALA B 124 1 O ALA B 124 N PHE B 32 SHEET 3 AB1 4 GLY B 99 CYS B 108 -1 N MET B 103 O THR B 119 SHEET 4 AB1 4 CYS B 113 GLN B 115 -1 O SER B 114 N LEU B 107 SHEET 1 AB2 2 VAL B 35 VAL B 37 0 SHEET 2 AB2 2 VAL B 48 LYS B 50 -1 O THR B 49 N GLU B 36 SHEET 1 AB3 9 VAL B 152 VAL B 158 0 SHEET 2 AB3 9 HIS B 179 ILE B 185 1 O LEU B 181 N PHE B 157 SHEET 3 AB3 9 LYS B 260 GLY B 266 1 O SER B 264 N ILE B 185 SHEET 4 AB3 9 GLY B 302 ASP B 306 1 O ASP B 306 N ILE B 265 SHEET 5 AB3 9 GLU B 351 SER B 357 1 O THR B 353 N ILE B 305 SHEET 6 AB3 9 HIS B 377 MET B 381 1 O MET B 381 N ILE B 356 SHEET 7 AB3 9 ILE B 430 ALA B 435 1 O VAL B 431 N ILE B 378 SHEET 8 AB3 9 GLY B 528 TRP B 532 1 O GLY B 528 N VAL B 432 SHEET 9 AB3 9 VAL B 152 VAL B 158 1 N GLY B 154 O LEU B 529 SHEET 1 AB4 3 GLY B 459 PRO B 460 0 SHEET 2 AB4 3 TYR B 437 THR B 442 -1 N THR B 442 O GLY B 459 SHEET 3 AB4 3 VAL B 469 ASP B 471 -1 O VAL B 470 N GLY B 438 SHEET 1 AB5 5 GLY B 459 PRO B 460 0 SHEET 2 AB5 5 TYR B 437 THR B 442 -1 N THR B 442 O GLY B 459 SHEET 3 AB5 5 ASP B 504 THR B 507 -1 O THR B 507 N ARG B 439 SHEET 4 AB5 5 ALA B 494 ARG B 499 -1 N ARG B 499 O ASP B 504 SHEET 5 AB5 5 GLU B 485 ASP B 489 -1 N HIS B 487 O TYR B 496 SSBOND 1 CYS A 188 CYS A 211 1555 1555 2.07 SSBOND 2 CYS B 188 CYS B 211 1555 1555 2.05 LINK ND2 ASN A 391 C1 NAG L 1 1555 1555 1.38 LINK ND2 ASN A 456 C1 NAG A 602 1555 1555 1.44 LINK ND2 ASN B 391 C1 NAG C 1 1555 1555 1.42 LINK ND2 ASN B 456 C1 NAG B 602 1555 1555 1.45 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.42 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 CISPEP 1 GLY A 183 PHE A 184 0 -2.21 CISPEP 2 GLU A 308 PHE A 309 0 -2.30 CISPEP 3 TRP A 532 GLU A 533 0 -5.78 CISPEP 4 GLY B 183 PHE B 184 0 -2.23 CISPEP 5 GLU B 308 PHE B 309 0 -2.87 CISPEP 6 TRP B 532 GLU B 533 0 -5.70 CRYST1 70.908 77.859 81.972 113.63 109.90 95.00 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014103 0.001234 0.006388 0.00000 SCALE2 0.000000 0.012893 0.006673 0.00000 SCALE3 0.000000 0.000000 0.014609 0.00000