HEADER TOXIN/ANTITOXIN 11-NOV-21 7VWO TITLE TA COMPLEX FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE VAPC43; COMPND 3 CHAIN: A, B, E, K, I, G; COMPND 4 SYNONYM: RNASE VAPC43,TOXIN VAPC43; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTITOXIN VAPB43; COMPND 9 CHAIN: H, D, J; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: VAPC43, RV2872, MTCY274.03; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3)PLYSS; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 11 ORGANISM_TAXID: 83332; SOURCE 12 STRAIN: ATCC 25618 / H37RV; SOURCE 13 GENE: VAPB43, RV2871, MTCY274.02; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3)PLYSS KEYWDS TOXIN-ANTITOXIN COMPLEX RIBONUCLEASE, TOXIN, TOXIN-ANTITOXIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.-J.EUN,B.-J.LEE,J.-Y.LEE REVDAT 1 16-NOV-22 7VWO 0 JRNL AUTH H.-J.EUN,B.-J.LEE,J.-Y.LEE JRNL TITL TA COMPLEX FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 59128 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2962 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4309 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 198 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7388 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 618 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : -0.80000 REMARK 3 B33 (A**2) : 0.56000 REMARK 3 B12 (A**2) : 0.68000 REMARK 3 B13 (A**2) : -1.23000 REMARK 3 B23 (A**2) : 0.20000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.226 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.166 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.045 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7563 ; 0.017 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 7089 ; 0.001 ; 0.014 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10290 ; 1.936 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16098 ; 1.469 ; 1.586 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 927 ; 6.023 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 516 ;26.512 ;19.593 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1146 ;15.050 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 108 ;20.681 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 924 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8793 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1995 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3735 ; 2.858 ; 3.007 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3734 ; 2.858 ; 3.008 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4653 ; 3.676 ; 4.494 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4654 ; 3.676 ; 4.493 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3828 ; 3.606 ; 3.497 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3829 ; 3.605 ; 3.496 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5638 ; 5.280 ; 5.071 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8873 ; 9.122 ;38.100 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8755 ; 9.083 ;37.509 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 18 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 142 B 1 142 4542 0.09 0.05 REMARK 3 2 A 1 142 E 1 142 4505 0.10 0.05 REMARK 3 3 A 1 142 K 1 142 4503 0.10 0.05 REMARK 3 4 A 1 142 I 1 142 4500 0.09 0.05 REMARK 3 5 A 1 142 G 1 142 4611 0.07 0.05 REMARK 3 6 B 1 142 E 1 142 4606 0.08 0.05 REMARK 3 7 B 1 142 K 1 142 4478 0.10 0.05 REMARK 3 8 B 1 142 I 1 142 4505 0.09 0.05 REMARK 3 9 B 1 142 G 1 142 4523 0.10 0.05 REMARK 3 10 E 1 142 K 1 142 4463 0.10 0.05 REMARK 3 11 E 1 142 I 1 142 4468 0.09 0.05 REMARK 3 12 E 1 142 G 1 142 4523 0.09 0.05 REMARK 3 13 K 1 142 I 1 142 4592 0.07 0.05 REMARK 3 14 K 1 142 G 1 142 4492 0.10 0.05 REMARK 3 15 I 1 142 G 1 142 4511 0.09 0.05 REMARK 3 16 H 1 28 D 1 28 578 0.15 0.05 REMARK 3 17 H 1 28 J 1 28 566 0.17 0.05 REMARK 3 18 D 1 28 J 1 28 565 0.16 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 142 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5520 5.7041 9.8111 REMARK 3 T TENSOR REMARK 3 T11: 0.1641 T22: 0.0113 REMARK 3 T33: 0.0698 T12: 0.0186 REMARK 3 T13: 0.0721 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.3491 L22: 2.5832 REMARK 3 L33: 1.9752 L12: -0.5923 REMARK 3 L13: 0.1669 L23: -0.0360 REMARK 3 S TENSOR REMARK 3 S11: -0.0718 S12: -0.1107 S13: 0.3172 REMARK 3 S21: 0.1741 S22: 0.1517 S23: 0.0574 REMARK 3 S31: -0.1134 S32: 0.0101 S33: -0.0799 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 142 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6948 -7.0609 -7.2889 REMARK 3 T TENSOR REMARK 3 T11: 0.1456 T22: 0.1110 REMARK 3 T33: 0.0805 T12: -0.0300 REMARK 3 T13: 0.0411 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 2.9828 L22: 2.3855 REMARK 3 L33: 2.3252 L12: -0.7989 REMARK 3 L13: 1.4015 L23: -0.0789 REMARK 3 S TENSOR REMARK 3 S11: -0.0352 S12: 0.2939 S13: -0.1043 REMARK 3 S21: -0.2268 S22: 0.1583 S23: 0.2457 REMARK 3 S31: -0.0046 S32: 0.0235 S33: -0.1231 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 142 REMARK 3 ORIGIN FOR THE GROUP (A): 19.6802 -24.0685 16.3200 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.1132 REMARK 3 T33: 0.0494 T12: 0.0537 REMARK 3 T13: 0.0471 T23: 0.0525 REMARK 3 L TENSOR REMARK 3 L11: 2.9490 L22: 2.0920 REMARK 3 L33: 2.1724 L12: 0.4965 REMARK 3 L13: -0.9592 L23: -0.0115 REMARK 3 S TENSOR REMARK 3 S11: -0.0717 S12: -0.2806 S13: 0.0944 REMARK 3 S21: 0.2312 S22: 0.1943 S23: 0.1870 REMARK 3 S31: 0.0612 S32: -0.0667 S33: -0.1226 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 1 K 142 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4912 -33.8556 -32.8661 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.1517 REMARK 3 T33: 0.0787 T12: 0.0012 REMARK 3 T13: -0.0097 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.8558 L22: 3.6228 REMARK 3 L33: 2.7983 L12: -0.0485 REMARK 3 L13: 0.1034 L23: -0.8182 REMARK 3 S TENSOR REMARK 3 S11: 0.1797 S12: 0.0457 S13: -0.1697 REMARK 3 S21: -0.2490 S22: -0.1373 S23: 0.0307 REMARK 3 S31: 0.3543 S32: -0.0507 S33: -0.0425 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 142 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4010 -11.0389 -27.1354 REMARK 3 T TENSOR REMARK 3 T11: 0.1327 T22: 0.1308 REMARK 3 T33: 0.0752 T12: 0.0107 REMARK 3 T13: 0.0714 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.9918 L22: 4.0420 REMARK 3 L33: 3.2037 L12: 0.2216 REMARK 3 L13: 0.0518 L23: -0.7565 REMARK 3 S TENSOR REMARK 3 S11: 0.1534 S12: -0.0526 S13: 0.1412 REMARK 3 S21: 0.3040 S22: -0.1606 S23: -0.0487 REMARK 3 S31: -0.3784 S32: -0.0520 S33: 0.0072 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1 G 142 REMARK 3 ORIGIN FOR THE GROUP (A): 29.0549 -36.7748 -0.7294 REMARK 3 T TENSOR REMARK 3 T11: 0.1519 T22: 0.0158 REMARK 3 T33: 0.0550 T12: 0.0088 REMARK 3 T13: 0.0075 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 3.4445 L22: 2.7184 REMARK 3 L33: 1.9760 L12: 0.5895 REMARK 3 L13: -0.0952 L23: 0.1852 REMARK 3 S TENSOR REMARK 3 S11: -0.0152 S12: 0.1256 S13: -0.3206 REMARK 3 S21: -0.2093 S22: 0.1366 S23: 0.0628 REMARK 3 S31: 0.1770 S32: 0.0095 S33: -0.1213 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 28 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6704 -38.8079 6.3597 REMARK 3 T TENSOR REMARK 3 T11: 0.3035 T22: 0.1765 REMARK 3 T33: 0.2791 T12: 0.0728 REMARK 3 T13: -0.0012 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 3.5315 L22: 2.3491 REMARK 3 L33: 2.8774 L12: 0.9936 REMARK 3 L13: 0.6571 L23: -0.3140 REMARK 3 S TENSOR REMARK 3 S11: 0.0952 S12: -0.0714 S13: -0.2767 REMARK 3 S21: 0.1290 S22: 0.0180 S23: -0.3295 REMARK 3 S31: 0.1134 S32: 0.2398 S33: -0.1132 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 28 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0757 7.7330 2.7531 REMARK 3 T TENSOR REMARK 3 T11: 0.3507 T22: 0.2067 REMARK 3 T33: 0.2468 T12: -0.0232 REMARK 3 T13: 0.1262 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 3.3477 L22: 2.1263 REMARK 3 L33: 3.0416 L12: -0.3998 REMARK 3 L13: 0.2563 L23: -0.4976 REMARK 3 S TENSOR REMARK 3 S11: -0.0610 S12: 0.1464 S13: 0.5120 REMARK 3 S21: 0.0072 S22: 0.0093 S23: -0.3197 REMARK 3 S31: -0.1853 S32: 0.3345 S33: 0.0517 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 1 J 28 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4367 -8.9477 -33.1433 REMARK 3 T TENSOR REMARK 3 T11: 0.4111 T22: 0.4916 REMARK 3 T33: 0.5032 T12: 0.1178 REMARK 3 T13: 0.1339 T23: -0.0464 REMARK 3 L TENSOR REMARK 3 L11: 3.6733 L22: 1.0777 REMARK 3 L33: 1.9884 L12: -1.6480 REMARK 3 L13: 2.3282 L23: -1.1605 REMARK 3 S TENSOR REMARK 3 S11: 0.1865 S12: -0.2393 S13: 0.0271 REMARK 3 S21: -0.0504 S22: 0.0215 S23: 0.3918 REMARK 3 S31: -0.1800 S32: -0.5528 S33: -0.2080 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7VWO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025545. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59128 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 44.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CHLORIDE, 0.1 M REMARK 280 MAGNESIUM ACETATE TETRAHYDRATE 0.05 M SODIUM CACODYLATE REMARK 280 TRIHYDRATE PH 6.5 10% W/V POLYETHYLENE GLYCOL 8,000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL J 15 REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH K 307 DISTANCE = 7.05 ANGSTROMS DBREF 7VWO A 1 142 UNP P9WF55 VPC43_MYCTU 1 142 DBREF 7VWO B 1 142 UNP P9WF55 VPC43_MYCTU 1 142 DBREF 7VWO E 1 142 UNP P9WF55 VPC43_MYCTU 1 142 DBREF 7VWO K 1 142 UNP P9WF55 VPC43_MYCTU 1 142 DBREF 7VWO I 1 142 UNP P9WF55 VPC43_MYCTU 1 142 DBREF 7VWO G 1 142 UNP P9WF55 VPC43_MYCTU 1 142 DBREF 7VWO H 1 28 UNP P9WL41 VPB43_MYCTU 49 76 DBREF 7VWO D 1 28 UNP P9WL41 VPB43_MYCTU 49 76 DBREF 7VWO J 1 28 UNP P9WL41 VPB43_MYCTU 49 76 SEQRES 1 A 142 MET LEU CYS VAL ASP VAL ASN VAL LEU VAL TYR ALA HIS SEQRES 2 A 142 ARG ALA ASP LEU ARG GLU HIS ALA ASP TYR ARG GLY LEU SEQRES 3 A 142 LEU GLU ARG LEU ALA ASN ASP ASP GLU PRO LEU GLY LEU SEQRES 4 A 142 PRO ASP SER VAL LEU ALA GLY PHE ILE ARG VAL VAL THR SEQRES 5 A 142 ASN ARG ARG VAL PHE THR GLU PRO THR SER PRO GLN ASP SEQRES 6 A 142 ALA TRP GLN ALA VAL ASP ALA LEU LEU ALA ALA PRO ALA SEQRES 7 A 142 ALA MET ARG LEU ARG PRO GLY GLU ARG HIS TRP MET ALA SEQRES 8 A 142 PHE ARG GLN LEU ALA SER ASP VAL ASP ALA ASN GLY ASN SEQRES 9 A 142 ASP ILE ALA ASP ALA HIS LEU ALA ALA TYR ALA LEU GLU SEQRES 10 A 142 ASN ASN ALA THR TRP LEU SER ALA ASP ARG GLY PHE ALA SEQRES 11 A 142 ARG PHE ARG ARG LEU ARG TRP ARG HIS PRO LEU ASP SEQRES 1 B 142 MET LEU CYS VAL ASP VAL ASN VAL LEU VAL TYR ALA HIS SEQRES 2 B 142 ARG ALA ASP LEU ARG GLU HIS ALA ASP TYR ARG GLY LEU SEQRES 3 B 142 LEU GLU ARG LEU ALA ASN ASP ASP GLU PRO LEU GLY LEU SEQRES 4 B 142 PRO ASP SER VAL LEU ALA GLY PHE ILE ARG VAL VAL THR SEQRES 5 B 142 ASN ARG ARG VAL PHE THR GLU PRO THR SER PRO GLN ASP SEQRES 6 B 142 ALA TRP GLN ALA VAL ASP ALA LEU LEU ALA ALA PRO ALA SEQRES 7 B 142 ALA MET ARG LEU ARG PRO GLY GLU ARG HIS TRP MET ALA SEQRES 8 B 142 PHE ARG GLN LEU ALA SER ASP VAL ASP ALA ASN GLY ASN SEQRES 9 B 142 ASP ILE ALA ASP ALA HIS LEU ALA ALA TYR ALA LEU GLU SEQRES 10 B 142 ASN ASN ALA THR TRP LEU SER ALA ASP ARG GLY PHE ALA SEQRES 11 B 142 ARG PHE ARG ARG LEU ARG TRP ARG HIS PRO LEU ASP SEQRES 1 E 142 MET LEU CYS VAL ASP VAL ASN VAL LEU VAL TYR ALA HIS SEQRES 2 E 142 ARG ALA ASP LEU ARG GLU HIS ALA ASP TYR ARG GLY LEU SEQRES 3 E 142 LEU GLU ARG LEU ALA ASN ASP ASP GLU PRO LEU GLY LEU SEQRES 4 E 142 PRO ASP SER VAL LEU ALA GLY PHE ILE ARG VAL VAL THR SEQRES 5 E 142 ASN ARG ARG VAL PHE THR GLU PRO THR SER PRO GLN ASP SEQRES 6 E 142 ALA TRP GLN ALA VAL ASP ALA LEU LEU ALA ALA PRO ALA SEQRES 7 E 142 ALA MET ARG LEU ARG PRO GLY GLU ARG HIS TRP MET ALA SEQRES 8 E 142 PHE ARG GLN LEU ALA SER ASP VAL ASP ALA ASN GLY ASN SEQRES 9 E 142 ASP ILE ALA ASP ALA HIS LEU ALA ALA TYR ALA LEU GLU SEQRES 10 E 142 ASN ASN ALA THR TRP LEU SER ALA ASP ARG GLY PHE ALA SEQRES 11 E 142 ARG PHE ARG ARG LEU ARG TRP ARG HIS PRO LEU ASP SEQRES 1 K 142 MET LEU CYS VAL ASP VAL ASN VAL LEU VAL TYR ALA HIS SEQRES 2 K 142 ARG ALA ASP LEU ARG GLU HIS ALA ASP TYR ARG GLY LEU SEQRES 3 K 142 LEU GLU ARG LEU ALA ASN ASP ASP GLU PRO LEU GLY LEU SEQRES 4 K 142 PRO ASP SER VAL LEU ALA GLY PHE ILE ARG VAL VAL THR SEQRES 5 K 142 ASN ARG ARG VAL PHE THR GLU PRO THR SER PRO GLN ASP SEQRES 6 K 142 ALA TRP GLN ALA VAL ASP ALA LEU LEU ALA ALA PRO ALA SEQRES 7 K 142 ALA MET ARG LEU ARG PRO GLY GLU ARG HIS TRP MET ALA SEQRES 8 K 142 PHE ARG GLN LEU ALA SER ASP VAL ASP ALA ASN GLY ASN SEQRES 9 K 142 ASP ILE ALA ASP ALA HIS LEU ALA ALA TYR ALA LEU GLU SEQRES 10 K 142 ASN ASN ALA THR TRP LEU SER ALA ASP ARG GLY PHE ALA SEQRES 11 K 142 ARG PHE ARG ARG LEU ARG TRP ARG HIS PRO LEU ASP SEQRES 1 I 142 MET LEU CYS VAL ASP VAL ASN VAL LEU VAL TYR ALA HIS SEQRES 2 I 142 ARG ALA ASP LEU ARG GLU HIS ALA ASP TYR ARG GLY LEU SEQRES 3 I 142 LEU GLU ARG LEU ALA ASN ASP ASP GLU PRO LEU GLY LEU SEQRES 4 I 142 PRO ASP SER VAL LEU ALA GLY PHE ILE ARG VAL VAL THR SEQRES 5 I 142 ASN ARG ARG VAL PHE THR GLU PRO THR SER PRO GLN ASP SEQRES 6 I 142 ALA TRP GLN ALA VAL ASP ALA LEU LEU ALA ALA PRO ALA SEQRES 7 I 142 ALA MET ARG LEU ARG PRO GLY GLU ARG HIS TRP MET ALA SEQRES 8 I 142 PHE ARG GLN LEU ALA SER ASP VAL ASP ALA ASN GLY ASN SEQRES 9 I 142 ASP ILE ALA ASP ALA HIS LEU ALA ALA TYR ALA LEU GLU SEQRES 10 I 142 ASN ASN ALA THR TRP LEU SER ALA ASP ARG GLY PHE ALA SEQRES 11 I 142 ARG PHE ARG ARG LEU ARG TRP ARG HIS PRO LEU ASP SEQRES 1 G 142 MET LEU CYS VAL ASP VAL ASN VAL LEU VAL TYR ALA HIS SEQRES 2 G 142 ARG ALA ASP LEU ARG GLU HIS ALA ASP TYR ARG GLY LEU SEQRES 3 G 142 LEU GLU ARG LEU ALA ASN ASP ASP GLU PRO LEU GLY LEU SEQRES 4 G 142 PRO ASP SER VAL LEU ALA GLY PHE ILE ARG VAL VAL THR SEQRES 5 G 142 ASN ARG ARG VAL PHE THR GLU PRO THR SER PRO GLN ASP SEQRES 6 G 142 ALA TRP GLN ALA VAL ASP ALA LEU LEU ALA ALA PRO ALA SEQRES 7 G 142 ALA MET ARG LEU ARG PRO GLY GLU ARG HIS TRP MET ALA SEQRES 8 G 142 PHE ARG GLN LEU ALA SER ASP VAL ASP ALA ASN GLY ASN SEQRES 9 G 142 ASP ILE ALA ASP ALA HIS LEU ALA ALA TYR ALA LEU GLU SEQRES 10 G 142 ASN ASN ALA THR TRP LEU SER ALA ASP ARG GLY PHE ALA SEQRES 11 G 142 ARG PHE ARG ARG LEU ARG TRP ARG HIS PRO LEU ASP SEQRES 1 H 28 TYR ARG VAL GLN PRO SER GLY LYS GLY GLY LEU ARG PRO SEQRES 2 H 28 GLY VAL ASP LEU SER SER ASN ALA ALA LEU ALA GLU ALA SEQRES 3 H 28 MET ASN SEQRES 1 D 28 TYR ARG VAL GLN PRO SER GLY LYS GLY GLY LEU ARG PRO SEQRES 2 D 28 GLY VAL ASP LEU SER SER ASN ALA ALA LEU ALA GLU ALA SEQRES 3 D 28 MET ASN SEQRES 1 J 28 TYR ARG VAL GLN PRO SER GLY LYS GLY GLY LEU ARG PRO SEQRES 2 J 28 GLY VAL ASP LEU SER SER ASN ALA ALA LEU ALA GLU ALA SEQRES 3 J 28 MET ASN FORMUL 10 HOH *618(H2 O) HELIX 1 AA1 ASP A 5 ARG A 14 1 10 HELIX 2 AA2 GLU A 19 ASP A 33 1 15 HELIX 3 AA3 ASP A 41 THR A 52 1 12 HELIX 4 AA4 SER A 62 ALA A 76 1 15 HELIX 5 AA5 GLY A 85 ASP A 100 1 16 HELIX 6 AA6 ASN A 104 ASN A 118 1 15 HELIX 7 AA7 ASP A 126 PHE A 132 5 7 HELIX 8 AA8 ASP B 5 ARG B 14 1 10 HELIX 9 AA9 GLU B 19 ASP B 33 1 15 HELIX 10 AB1 ASP B 41 THR B 52 1 12 HELIX 11 AB2 SER B 62 ALA B 76 1 15 HELIX 12 AB3 ARG B 87 ASP B 100 1 14 HELIX 13 AB4 ASN B 104 ASN B 118 1 15 HELIX 14 AB5 ASP B 126 PHE B 132 5 7 HELIX 15 AB6 ASP E 5 ARG E 14 1 10 HELIX 16 AB7 GLU E 19 ASP E 33 1 15 HELIX 17 AB8 ASP E 41 THR E 52 1 12 HELIX 18 AB9 SER E 62 ALA E 76 1 15 HELIX 19 AC1 ARG E 87 ASP E 100 1 14 HELIX 20 AC2 GLY E 103 ASN E 119 1 17 HELIX 21 AC3 ASP E 126 PHE E 132 5 7 HELIX 22 AC4 ASP K 5 ARG K 14 1 10 HELIX 23 AC5 GLU K 19 ASP K 33 1 15 HELIX 24 AC6 ASP K 41 THR K 52 1 12 HELIX 25 AC7 SER K 62 ALA K 76 1 15 HELIX 26 AC8 ARG K 87 ASP K 100 1 14 HELIX 27 AC9 GLY K 103 ASN K 118 1 16 HELIX 28 AD1 ASP K 126 PHE K 132 5 7 HELIX 29 AD2 ASP I 5 ARG I 14 1 10 HELIX 30 AD3 GLU I 19 ASP I 33 1 15 HELIX 31 AD4 ASP I 41 THR I 52 1 12 HELIX 32 AD5 SER I 62 ALA I 76 1 15 HELIX 33 AD6 ARG I 87 ASP I 100 1 14 HELIX 34 AD7 ASN I 104 ASN I 118 1 15 HELIX 35 AD8 ASP I 126 PHE I 132 5 7 HELIX 36 AD9 ASP G 5 ARG G 14 1 10 HELIX 37 AE1 GLU G 19 ASP G 33 1 15 HELIX 38 AE2 ASP G 41 THR G 52 1 12 HELIX 39 AE3 SER G 62 ALA G 76 1 15 HELIX 40 AE4 GLY G 85 ASP G 100 1 16 HELIX 41 AE5 ASN G 104 ASN G 118 1 15 HELIX 42 AE6 ASP G 126 PHE G 132 5 7 HELIX 43 AE7 SER H 19 ASN H 28 1 10 HELIX 44 AE8 SER D 19 ASN D 28 1 10 HELIX 45 AE9 SER J 19 ASN J 28 1 10 SHEET 1 AA1 5 ALA A 79 LEU A 82 0 SHEET 2 AA1 5 LEU A 37 PRO A 40 1 N LEU A 39 O MET A 80 SHEET 3 AA1 5 LEU A 2 VAL A 4 1 N LEU A 2 O GLY A 38 SHEET 4 AA1 5 THR A 121 LEU A 123 1 O THR A 121 N CYS A 3 SHEET 5 AA1 5 TRP A 137 ARG A 138 1 O ARG A 138 N TRP A 122 SHEET 1 AA2 5 ALA B 79 LEU B 82 0 SHEET 2 AA2 5 LEU B 37 PRO B 40 1 N LEU B 39 O LEU B 82 SHEET 3 AA2 5 LEU B 2 VAL B 4 1 N LEU B 2 O GLY B 38 SHEET 4 AA2 5 THR B 121 LEU B 123 1 O THR B 121 N CYS B 3 SHEET 5 AA2 5 ARG B 136 ARG B 138 1 O ARG B 136 N TRP B 122 SHEET 1 AA3 5 ALA E 79 LEU E 82 0 SHEET 2 AA3 5 LEU E 37 PRO E 40 1 N LEU E 37 O MET E 80 SHEET 3 AA3 5 LEU E 2 VAL E 4 1 N LEU E 2 O GLY E 38 SHEET 4 AA3 5 THR E 121 LEU E 123 1 O LEU E 123 N CYS E 3 SHEET 5 AA3 5 ARG E 136 ARG E 138 1 O ARG E 136 N TRP E 122 SHEET 1 AA4 5 ALA K 79 LEU K 82 0 SHEET 2 AA4 5 LEU K 37 PRO K 40 1 N LEU K 39 O MET K 80 SHEET 3 AA4 5 LEU K 2 VAL K 4 1 N LEU K 2 O GLY K 38 SHEET 4 AA4 5 THR K 121 LEU K 123 1 O THR K 121 N CYS K 3 SHEET 5 AA4 5 TRP K 137 ARG K 138 1 O ARG K 138 N TRP K 122 SHEET 1 AA5 5 ALA I 79 LEU I 82 0 SHEET 2 AA5 5 LEU I 37 PRO I 40 1 N LEU I 39 O LEU I 82 SHEET 3 AA5 5 LEU I 2 VAL I 4 1 N LEU I 2 O GLY I 38 SHEET 4 AA5 5 THR I 121 LEU I 123 1 O THR I 121 N CYS I 3 SHEET 5 AA5 5 TRP I 137 ARG I 138 1 O ARG I 138 N TRP I 122 SHEET 1 AA6 5 ALA G 79 LEU G 82 0 SHEET 2 AA6 5 LEU G 37 PRO G 40 1 N LEU G 39 O MET G 80 SHEET 3 AA6 5 LEU G 2 VAL G 4 1 N LEU G 2 O GLY G 38 SHEET 4 AA6 5 THR G 121 LEU G 123 1 O THR G 121 N CYS G 3 SHEET 5 AA6 5 TRP G 137 ARG G 138 1 O ARG G 138 N TRP G 122 CRYST1 50.847 74.501 74.882 73.16 70.24 70.03 P 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019667 -0.007148 -0.005769 0.00000 SCALE2 0.000000 0.014282 -0.002868 0.00000 SCALE3 0.000000 0.000000 0.014473 0.00000