HEADER HYDROLASE 12-NOV-21 7VX3 TITLE OXA-58 CRYSTAL STRUCTURE OF ACYLATED MEROPENEM COMPLEX 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: BLAOXA-58, BLA-OXA-58, BLA-OXA58; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS OXA, MULTI-DRUG RESISTANCE, COMPLEX, DEGRADATION, ANTIBIOTIC, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SAINO,T.SUGIYABU,M.MIYANO REVDAT 2 29-NOV-23 7VX3 1 REMARK REVDAT 1 23-NOV-22 7VX3 0 JRNL AUTH H.SAINO,T.SUGIYABU,M.MIYANO JRNL TITL OXA-58 CRYSTAL STRUCTURE OF ACYLATED MEROPENEM COMPLEX 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.SAINO,T.SUGIYABU,G.UENO,M.YAMAMOTO,Y.ISHII,M.MIYANO REMARK 1 TITL CRYSTAL STRUCTURE OF OXA-58 WITH THE SUBSTRATE-BINDING CLEFT REMARK 1 TITL 2 IN A CLOSED STATE: INSIGHTS INTO THE MOBILITY AND STABILITY REMARK 1 TITL 3 OF THE OXA-58 STRUCTURE. REMARK 1 REF PLOS ONE V. 10 45869 2015 REMARK 1 REFN ESSN 1932-6203 REMARK 1 PMID 26701320 REMARK 1 DOI 10.1371/JOURNAL.PONE.0145869 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.130 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 45862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.680 REMARK 3 FREE R VALUE TEST SET COUNT : 3982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.6200 - 4.8900 0.88 2066 185 0.1480 0.1290 REMARK 3 2 4.8700 - 3.8800 0.88 2075 198 0.1071 0.1263 REMARK 3 3 3.8700 - 3.3900 0.88 2052 194 0.1243 0.1457 REMARK 3 4 3.3800 - 3.0800 0.89 2085 200 0.1386 0.1791 REMARK 3 5 3.0800 - 2.8600 0.89 2094 196 0.1518 0.1986 REMARK 3 6 2.8600 - 2.6900 0.89 2024 193 0.1571 0.1737 REMARK 3 7 2.6900 - 2.5500 0.89 2124 206 0.1631 0.1855 REMARK 3 8 2.5500 - 2.4400 0.89 2081 192 0.1606 0.1877 REMARK 3 9 2.4400 - 2.3500 0.90 2091 194 0.1763 0.1727 REMARK 3 10 2.3500 - 2.2700 0.90 2078 187 0.1734 0.1949 REMARK 3 11 2.2700 - 2.2000 0.90 2153 195 0.1873 0.1857 REMARK 3 12 2.2000 - 2.1300 0.90 2088 197 0.1853 0.2413 REMARK 3 13 2.1300 - 2.0800 0.90 2117 196 0.1908 0.2484 REMARK 3 14 2.0800 - 2.0300 0.90 2068 189 0.2073 0.2200 REMARK 3 15 2.0300 - 1.9800 0.90 2120 197 0.2131 0.2548 REMARK 3 16 1.9800 - 1.9400 0.91 2174 198 0.2303 0.2936 REMARK 3 17 1.9400 - 1.9000 0.91 2066 193 0.2612 0.3267 REMARK 3 18 1.9000 - 1.8600 0.90 2138 204 0.2761 0.2695 REMARK 3 19 1.8600 - 1.8300 0.91 2124 197 0.3028 0.3434 REMARK 3 20 1.8300 - 1.8000 0.91 2141 192 0.3560 0.2880 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2025 REMARK 3 ANGLE : 0.924 2746 REMARK 3 CHIRALITY : 0.047 300 REMARK 3 PLANARITY : 0.005 346 REMARK 3 DIHEDRAL : 17.091 866 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VX3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025525. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI-FILTER REMARK 200 OPTICS : CONFOCAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS VII REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : IMOSFLM REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 184659 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 28.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 65.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7VVI REMARK 200 REMARK 200 REMARK: THIN PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES-NA (PH 7.5), 1.55 M LISO4, REMARK 280 NACO3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.64500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.73435 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.82333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 37.64500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 21.73435 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 39.82333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 37.64500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 21.73435 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.82333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.46870 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 79.64667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 43.46870 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 79.64667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 43.46870 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 79.64667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 ILE A 6 REMARK 465 LEU A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 VAL A 10 REMARK 465 CYS A 11 REMARK 465 LEU A 12 REMARK 465 SER A 13 REMARK 465 ILE A 14 REMARK 465 SER A 15 REMARK 465 ILE A 16 REMARK 465 GLY A 17 REMARK 465 ALA A 18 REMARK 465 CYS A 19 REMARK 465 ALA A 20 REMARK 465 GLU A 21 REMARK 465 HIS A 22 REMARK 465 SER A 23 REMARK 465 MET A 24 REMARK 465 SER A 25 REMARK 465 ARG A 26 REMARK 465 ALA A 27 REMARK 465 LYS A 28 REMARK 465 THR A 29 REMARK 465 SER A 30 REMARK 465 THR A 31 REMARK 465 ILE A 32 REMARK 465 PRO A 33 REMARK 465 GLN A 34 REMARK 465 VAL A 35 REMARK 465 ASN A 36 REMARK 465 ASN A 37 REMARK 465 SER A 38 REMARK 465 ILE A 39 REMARK 465 ILE A 40 REMARK 465 ASP A 41 REMARK 465 GLN A 42 REMARK 465 ASN A 43 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CBE DWZ A 303 O HOH A 427 1.44 REMARK 500 C26 MER A 302 O HOH A 422 1.69 REMARK 500 O HOH A 581 O HOH A 589 1.80 REMARK 500 O HOH A 514 O HOH A 558 1.87 REMARK 500 C26 MER A 302 O HOH A 422 1.98 REMARK 500 OG SER A 83 OAC DWZ A 303 2.07 REMARK 500 ND2 ASN A 64 O HOH A 401 2.09 REMARK 500 OD2 ASP A 269 O HOH A 402 2.09 REMARK 500 C25 MER A 302 O HOH A 417 2.09 REMARK 500 O HOH A 484 O HOH A 554 2.10 REMARK 500 C17 MER A 302 O HOH A 417 2.11 REMARK 500 C25 MER A 302 O HOH A 417 2.13 REMARK 500 O HOH A 413 O HOH A 538 2.14 REMARK 500 O HOH A 559 O HOH A 585 2.15 REMARK 500 O HOH A 511 O HOH A 592 2.15 REMARK 500 O HOH A 589 O HOH A 599 2.16 REMARK 500 OG SER A 83 O6 MER A 302 2.16 REMARK 500 OG SER A 83 O6 MER A 302 2.16 REMARK 500 O HOH A 481 O HOH A 532 2.16 REMARK 500 NH1 ARG A 211 O HOH A 403 2.16 REMARK 500 O TRP A 107 O HOH A 404 2.16 REMARK 500 O HOH A 408 O HOH A 431 2.16 REMARK 500 ND2 ASN A 96 O HOH A 405 2.17 REMARK 500 O HOH A 530 O HOH A 552 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C25 MER A 302 O HOH A 432 2755 1.99 REMARK 500 C25 MER A 302 O HOH A 432 2755 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 52 31.94 -91.41 REMARK 500 GLN A 63 -22.43 -140.20 REMARK 500 ALA A 82 -130.24 60.02 REMARK 500 THR A 131 94.36 -69.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 603 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 604 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A 605 DISTANCE = 7.16 ANGSTROMS REMARK 525 HOH A 606 DISTANCE = 8.74 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7VVI RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH DIFFERENT LIGAND STATUS DBREF 7VX3 A 1 280 UNP Q2TR58 Q2TR58_ACIBA 1 280 SEQRES 1 A 280 MET LYS LEU LEU LYS ILE LEU SER LEU VAL CYS LEU SER SEQRES 2 A 280 ILE SER ILE GLY ALA CYS ALA GLU HIS SER MET SER ARG SEQRES 3 A 280 ALA LYS THR SER THR ILE PRO GLN VAL ASN ASN SER ILE SEQRES 4 A 280 ILE ASP GLN ASN VAL GLN ALA LEU PHE ASN GLU ILE SER SEQRES 5 A 280 ALA ASP ALA VAL PHE VAL THR TYR ASP GLY GLN ASN ILE SEQRES 6 A 280 LYS LYS TYR GLY THR HIS LEU ASP ARG ALA LYS THR ALA SEQRES 7 A 280 TYR ILE PRO ALA SER THR PHE KCX ILE ALA ASN ALA LEU SEQRES 8 A 280 ILE GLY LEU GLU ASN HIS LYS ALA THR SER THR GLU ILE SEQRES 9 A 280 PHE LYS TRP ASP GLY LYS PRO ARG PHE PHE LYS ALA TRP SEQRES 10 A 280 ASP LYS ASP PHE THR LEU GLY GLU ALA MET GLN ALA SER SEQRES 11 A 280 THR VAL PRO VAL TYR GLN GLU LEU ALA ARG ARG ILE GLY SEQRES 12 A 280 PRO SER LEU MET GLN SER GLU LEU GLN ARG ILE GLY TYR SEQRES 13 A 280 GLY ASN MET GLN ILE GLY THR GLU VAL ASP GLN PHE TRP SEQRES 14 A 280 LEU LYS GLY PRO LEU THR ILE THR PRO ILE GLN GLU VAL SEQRES 15 A 280 LYS PHE VAL TYR ASP LEU ALA GLN GLY GLN LEU PRO PHE SEQRES 16 A 280 LYS PRO GLU VAL GLN GLN GLN VAL LYS GLU MET LEU TYR SEQRES 17 A 280 VAL GLU ARG ARG GLY GLU ASN ARG LEU TYR ALA LYS SER SEQRES 18 A 280 GLY TRP GLY MET ALA VAL ASP PRO GLN VAL GLY TRP TYR SEQRES 19 A 280 VAL GLY PHE VAL GLU LYS ALA ASP GLY GLN VAL VAL ALA SEQRES 20 A 280 PHE ALA LEU ASN MET GLN MET LYS ALA GLY ASP ASP ILE SEQRES 21 A 280 ALA LEU ARG LYS GLN LEU SER LEU ASP VAL LEU ASP LYS SEQRES 22 A 280 LEU GLY VAL PHE HIS TYR LEU MODRES 7VX3 KCX A 86 LYS MODIFIED RESIDUE HET KCX A 86 12 HET SO4 A 301 5 HET MER A 302 52 HET DWZ A 303 26 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM SO4 SULFATE ION HETNAM MER (4R,5S)-3-{[(3S,5S)-5-(DIMETHYLCARBAMOYL)PYRROLIDIN-3- HETNAM 2 MER YL]SULFANYL}-5-[(2S,3R)-3-HYDROXY-1-OXOBUTAN-2-YL]-4- HETNAM 3 MER METHYL-4,5-D IHYDRO-1H-PYRROLE-2-CARBOXYLIC ACID HETNAM DWZ (2S,3R,4S)-4-{[(3S,5S)-5-(DIMETHYLCARBAMOYL)PYRROLIDIN- HETNAM 2 DWZ 3-YL]SULFANYL}-2-[(2S,3R)-3-HYDROXY-1-OXOBUTAN-2-YL]- HETNAM 3 DWZ 3-METHYL-3,4-DIHYDRO-2H-PYRROLE-5-CARBOXYLIC ACID HETSYN MER MEROPENEM, BOUND FORM HETSYN DWZ MEROPENEM, BOUND FORM FORMUL 1 KCX C7 H14 N2 O4 FORMUL 2 SO4 O4 S 2- FORMUL 3 MER C17 H27 N3 O5 S FORMUL 4 DWZ C17 H27 N3 O5 S FORMUL 5 HOH *206(H2 O) HELIX 1 AA1 VAL A 44 ASN A 49 1 6 HELIX 2 AA2 HIS A 71 THR A 77 5 7 HELIX 3 AA3 PRO A 81 THR A 84 5 4 HELIX 4 AA4 PHE A 85 ASN A 96 1 12 HELIX 5 AA5 PHE A 114 ASP A 118 5 5 HELIX 6 AA6 THR A 122 SER A 130 1 9 HELIX 7 AA7 THR A 131 GLY A 143 1 13 HELIX 8 AA8 GLY A 143 ILE A 154 1 12 HELIX 9 AA9 GLN A 167 GLY A 172 1 6 HELIX 10 AB1 THR A 177 GLN A 190 1 14 HELIX 11 AB2 LYS A 196 LEU A 207 1 12 HELIX 12 AB3 ALA A 261 LEU A 274 1 14 SHEET 1 AA1 6 ILE A 65 GLY A 69 0 SHEET 2 AA1 6 ALA A 55 TYR A 60 -1 N PHE A 57 O TYR A 68 SHEET 3 AA1 6 VAL A 245 MET A 254 -1 O ALA A 247 N TYR A 60 SHEET 4 AA1 6 GLN A 230 GLU A 239 -1 N TYR A 234 O LEU A 250 SHEET 5 AA1 6 ASN A 215 GLY A 224 -1 N GLY A 222 O TRP A 233 SHEET 6 AA1 6 TYR A 208 ARG A 212 -1 N GLU A 210 O LEU A 217 LINK OG SER A 83 C1 AMER A 302 1555 1555 1.23 LINK OG SER A 83 C1 BMER A 302 1555 1555 1.23 LINK OG SER A 83 CAACDWZ A 303 1555 1555 1.19 LINK C PHE A 85 N KCX A 86 1555 1555 1.33 LINK C KCX A 86 N ILE A 87 1555 1555 1.33 CISPEP 1 GLY A 172 PRO A 173 0 4.40 CISPEP 2 ASP A 228 PRO A 229 0 1.58 CRYST1 75.290 75.290 119.470 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013282 0.007668 0.000000 0.00000 SCALE2 0.000000 0.015337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008370 0.00000