HEADER VIRUS 13-NOV-21 7VY5 TITLE COXSACKIEVIRUS B3 (VP3-234Q) INCUBATION WITH CD55 AT PH7.4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: P1B,VIRION PROTEIN 2; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: P1C,VIRION PROTEIN 3; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: GENOME POLYPROTEIN; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: COMPLEMENT DECAY-ACCELERATING FACTOR; COMPND 22 CHAIN: E; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3; SOURCE 3 ORGANISM_TAXID: 12072; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: RHABDOMYOSARCOMA CELLS; SOURCE 7 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-136; SOURCE 8 EXPRESSION_SYSTEM_TISSUE: MUSCLE; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3; SOURCE 11 ORGANISM_TAXID: 12072; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: RHABDOMYOSARCOMA CELLS; SOURCE 15 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-136; SOURCE 16 EXPRESSION_SYSTEM_TISSUE: MUSCLE; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3; SOURCE 19 ORGANISM_TAXID: 12072; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM_CELL_LINE: RHABDOMYOSARCOMA CELLS; SOURCE 23 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-136; SOURCE 24 EXPRESSION_SYSTEM_TISSUE: MUSCLE; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3; SOURCE 27 ORGANISM_TAXID: 12072; SOURCE 28 STRAIN: NANCY; SOURCE 29 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 31 EXPRESSION_SYSTEM_CELL_LINE: RHABDOMYOSARCOMA CELLS; SOURCE 32 EXPRESSION_SYSTEM_ATCC_NUMBER: CCL-136; SOURCE 33 EXPRESSION_SYSTEM_TISSUE: MUSCLE; SOURCE 34 MOL_ID: 5; SOURCE 35 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 36 ORGANISM_COMMON: HUMAN; SOURCE 37 ORGANISM_TAXID: 9606; SOURCE 38 GENE: CD55; SOURCE 39 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 40 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 41 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 42 EXPRESSION_SYSTEM_VECTOR_TYPE: PCMV3 KEYWDS CVB3, VP3-234Q, CD55, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR Q.L.WANG,C.C.LIU REVDAT 3 10-AUG-22 7VY5 1 JRNL REVDAT 2 03-AUG-22 7VY5 1 JRNL REMARK REVDAT 1 19-JAN-22 7VY5 0 JRNL AUTH Q.WANG,Q.YANG,C.LIU,G.WANG,H.SONG,G.SHANG,R.PENG,X.QU,S.LIU, JRNL AUTH 2 Y.CUI,P.WANG,W.XU,X.ZHAO,J.QI,M.YANG,G.F.GAO JRNL TITL MOLECULAR BASIS OF DIFFERENTIAL RECEPTOR USAGE FOR NATURALLY JRNL TITL 2 OCCURRING CD55-BINDING AND -NONBINDING COXSACKIEVIRUS B3 JRNL TITL 3 STRAINS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35046043 JRNL DOI 10.1073/PNAS.2118590119 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CTFFIND, UCSF CHIMERA, PHENIX, REMARK 3 RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1COV REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.150 REMARK 3 NUMBER OF PARTICLES : 12178 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7VY5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025623. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COXSACKIEVIRUS B3 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 75000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.499970 0.309035 0.809028 0.00182 REMARK 350 BIOMT2 2 0.308969 0.809047 -0.499982 -0.00113 REMARK 350 BIOMT3 2 -0.809054 0.499941 0.309017 0.01673 REMARK 350 BIOMT1 3 -0.309095 0.808999 0.499982 0.01592 REMARK 350 BIOMT2 3 0.808958 0.500078 -0.309047 -0.00984 REMARK 350 BIOMT3 3 -0.500048 0.308939 -0.809017 0.01986 REMARK 350 BIOMT1 4 -0.309095 0.808958 -0.500048 0.02281 REMARK 350 BIOMT2 4 0.808999 0.500078 0.308939 -0.01410 REMARK 350 BIOMT3 4 0.499982 -0.309047 -0.809017 0.00507 REMARK 350 BIOMT1 5 0.499970 0.308969 -0.809054 0.01297 REMARK 350 BIOMT2 5 0.309035 0.809047 0.499941 -0.00802 REMARK 350 BIOMT3 5 0.809028 -0.499982 0.309017 -0.00721 REMARK 350 BIOMT1 6 -1.000000 -0.000096 0.000000 0.02802 REMARK 350 BIOMT2 6 -0.000096 1.000000 -0.000132 0.00000 REMARK 350 BIOMT3 6 0.000000 -0.000132 -1.000000 0.01378 REMARK 350 BIOMT1 7 -0.500000 -0.309113 -0.808980 0.02620 REMARK 350 BIOMT2 7 0.309027 0.808951 -0.500100 -0.00113 REMARK 350 BIOMT3 7 0.809013 -0.500047 -0.308951 -0.00295 REMARK 350 BIOMT1 8 0.309017 -0.809047 -0.499952 0.01210 REMARK 350 BIOMT2 8 0.809053 0.499959 -0.308988 -0.00984 REMARK 350 BIOMT3 8 0.499941 -0.309005 0.809058 -0.00608 REMARK 350 BIOMT1 9 0.309017 -0.809006 0.500018 0.00521 REMARK 350 BIOMT2 9 0.808962 0.500041 0.309094 -0.01410 REMARK 350 BIOMT3 9 -0.500088 0.308981 0.808976 0.00871 REMARK 350 BIOMT1 10 -0.500000 -0.309047 0.809006 0.01505 REMARK 350 BIOMT2 10 0.308881 0.809083 0.499978 -0.00801 REMARK 350 BIOMT3 10 -0.809069 0.499875 -0.309083 0.02099 REMARK 350 BIOMT1 11 1.000000 0.000096 0.000080 0.00000 REMARK 350 BIOMT2 11 0.000096 -1.000000 0.000000 -0.00254 REMARK 350 BIOMT3 11 0.000080 0.000000 -1.000000 0.01378 REMARK 350 BIOMT1 12 0.499935 0.309153 0.809005 0.00182 REMARK 350 BIOMT2 12 -0.308921 -0.809017 0.500059 -0.00141 REMARK 350 BIOMT3 12 0.809094 -0.499916 -0.308952 -0.00295 REMARK 350 BIOMT1 13 -0.309057 0.809072 0.499887 0.01592 REMARK 350 BIOMT2 13 -0.808987 -0.500000 0.309095 0.00730 REMARK 350 BIOMT3 13 0.500023 -0.308874 0.809057 -0.00608 REMARK 350 BIOMT1 14 -0.308977 0.808981 -0.500083 0.02281 REMARK 350 BIOMT2 14 -0.809028 -0.500000 -0.308987 0.01156 REMARK 350 BIOMT3 14 -0.500006 0.309112 0.808977 0.00871 REMARK 350 BIOMT1 15 0.500065 0.309007 -0.808981 0.01297 REMARK 350 BIOMT2 15 -0.308987 -0.809017 -0.500018 0.00548 REMARK 350 BIOMT3 15 -0.808988 0.500006 -0.309082 0.02099 REMARK 350 BIOMT1 16 -1.000000 0.000000 -0.000080 0.02802 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000132 -0.00254 REMARK 350 BIOMT3 16 -0.000080 0.000132 1.000000 0.00000 REMARK 350 BIOMT1 17 -0.499905 -0.309076 -0.809053 0.02620 REMARK 350 BIOMT2 17 -0.309076 -0.808981 0.500022 -0.00141 REMARK 350 BIOMT3 17 -0.809053 0.500022 0.308886 0.01673 REMARK 350 BIOMT1 18 0.309135 -0.809023 -0.499917 0.01210 REMARK 350 BIOMT2 18 -0.809023 -0.500037 0.308940 0.00730 REMARK 350 BIOMT3 18 -0.499917 0.308940 -0.809098 0.01986 REMARK 350 BIOMT1 19 0.309055 -0.808933 0.500113 0.00521 REMARK 350 BIOMT2 19 -0.808933 -0.500119 -0.309046 0.01156 REMARK 350 BIOMT3 19 0.500113 -0.309046 -0.808936 0.00507 REMARK 350 BIOMT1 20 -0.500035 -0.308929 0.809029 0.01505 REMARK 350 BIOMT2 20 -0.308929 -0.809113 -0.499900 0.00548 REMARK 350 BIOMT3 20 0.809029 -0.499900 0.309148 -0.00721 REMARK 350 BIOMT1 21 -0.000088 0.000026 1.000000 0.00712 REMARK 350 BIOMT2 21 1.000000 0.000114 0.000088 -0.01528 REMARK 350 BIOMT3 21 -0.000114 1.000000 -0.000026 0.00816 REMARK 350 BIOMT1 22 -0.809090 0.499934 0.308933 0.02385 REMARK 350 BIOMT2 22 0.499934 0.309172 0.808999 -0.01346 REMARK 350 BIOMT3 22 0.308933 0.808999 -0.500082 0.00703 REMARK 350 BIOMT1 23 -0.500000 0.308881 -0.809069 0.02698 REMARK 350 BIOMT2 23 -0.309047 0.809083 0.499875 0.00064 REMARK 350 BIOMT3 23 0.809006 0.499978 -0.309083 -0.00168 REMARK 350 BIOMT1 24 0.500030 -0.309105 -0.808965 0.01219 REMARK 350 BIOMT2 24 -0.308958 0.808987 -0.500084 0.00753 REMARK 350 BIOMT3 24 0.809021 0.499994 0.309017 -0.00594 REMARK 350 BIOMT1 25 0.808992 -0.499988 0.309101 -0.00009 REMARK 350 BIOMT2 25 0.500077 0.309017 -0.808970 -0.00231 REMARK 350 BIOMT3 25 0.308958 0.809024 0.500025 0.00014 REMARK 350 BIOMT1 26 0.000088 -0.000106 -1.000000 0.02090 REMARK 350 BIOMT2 26 -1.000000 0.000018 -0.000088 0.01274 REMARK 350 BIOMT3 26 0.000018 1.000000 -0.000106 0.00816 REMARK 350 BIOMT1 27 0.809065 -0.499999 -0.308893 0.00417 REMARK 350 BIOMT2 27 -0.499893 -0.309065 -0.809064 0.01092 REMARK 350 BIOMT3 27 0.309064 0.808999 -0.500000 0.00703 REMARK 350 BIOMT1 28 0.499935 -0.308921 0.809094 0.00104 REMARK 350 BIOMT2 28 0.309153 -0.809017 -0.499916 -0.00318 REMARK 350 BIOMT3 28 0.809005 0.500059 -0.308952 -0.00168 REMARK 350 BIOMT1 29 -0.500095 0.309065 0.808940 0.01583 REMARK 350 BIOMT2 29 0.309065 -0.808921 0.500125 -0.01007 REMARK 350 BIOMT3 29 0.808940 0.500125 0.309016 -0.00594 REMARK 350 BIOMT1 30 -0.809017 0.499923 -0.309141 0.02811 REMARK 350 BIOMT2 30 -0.500036 -0.308910 0.809035 -0.00023 REMARK 350 BIOMT3 30 0.308959 0.809105 0.499893 0.00014 REMARK 350 BIOMT1 31 -0.000008 -0.000026 -1.000000 0.02090 REMARK 350 BIOMT2 31 1.000000 -0.000018 -0.000008 -0.01528 REMARK 350 BIOMT3 31 -0.000018 -1.000000 0.000026 0.00562 REMARK 350 BIOMT1 32 0.809042 -0.499964 -0.309011 0.00417 REMARK 350 BIOMT2 32 0.499971 0.309017 0.809035 -0.01346 REMARK 350 BIOMT3 32 -0.308999 -0.809039 0.499975 0.00675 REMARK 350 BIOMT1 33 0.500030 -0.308958 0.809021 0.00104 REMARK 350 BIOMT2 33 -0.309105 0.808987 0.499994 0.00064 REMARK 350 BIOMT3 33 -0.808965 -0.500084 0.309017 0.01546 REMARK 350 BIOMT1 34 -0.500000 0.309027 0.809013 0.01583 REMARK 350 BIOMT2 34 -0.309113 0.808951 -0.500047 0.00753 REMARK 350 BIOMT3 34 -0.808980 -0.500100 -0.308951 0.01972 REMARK 350 BIOMT1 35 -0.809040 0.499958 -0.309023 0.02811 REMARK 350 BIOMT2 35 0.499958 0.308958 -0.809065 -0.00231 REMARK 350 BIOMT3 35 -0.309023 -0.809065 -0.499918 0.01364 REMARK 350 BIOMT1 36 0.000008 0.000106 1.000000 0.00712 REMARK 350 BIOMT2 36 -1.000000 -0.000114 0.000008 0.01274 REMARK 350 BIOMT3 36 0.000114 -1.000000 0.000106 0.00562 REMARK 350 BIOMT1 37 -0.809017 0.500029 0.308970 0.02385 REMARK 350 BIOMT2 37 -0.500012 -0.309124 -0.808969 0.01092 REMARK 350 BIOMT3 37 -0.308998 -0.808958 0.500107 0.00675 REMARK 350 BIOMT1 38 -0.499965 0.308999 -0.809046 0.02698 REMARK 350 BIOMT2 38 0.308999 -0.809053 -0.499953 -0.00318 REMARK 350 BIOMT3 38 -0.809046 -0.499953 0.309018 0.01546 REMARK 350 BIOMT1 39 0.500065 -0.308987 -0.808988 0.01219 REMARK 350 BIOMT2 39 0.309007 -0.809017 0.500006 -0.01007 REMARK 350 BIOMT3 39 -0.808981 -0.500018 -0.309082 0.01972 REMARK 350 BIOMT1 40 0.809065 -0.499893 0.309064 -0.00009 REMARK 350 BIOMT2 40 -0.499999 -0.309065 0.808999 -0.00023 REMARK 350 BIOMT3 40 -0.308893 -0.809064 -0.500000 0.01364 REMARK 350 BIOMT1 41 -0.000088 1.000000 -0.000114 0.01528 REMARK 350 BIOMT2 41 0.000026 0.000114 1.000000 -0.00816 REMARK 350 BIOMT3 41 1.000000 0.000088 -0.000026 -0.00712 REMARK 350 BIOMT1 42 0.309017 0.808962 -0.500088 0.01415 REMARK 350 BIOMT2 42 -0.809006 0.500041 0.308981 0.00857 REMARK 350 BIOMT3 42 0.500018 0.309094 0.808976 -0.00530 REMARK 350 BIOMT1 43 0.809042 0.499971 -0.308999 0.00544 REMARK 350 BIOMT2 43 -0.499964 0.309017 -0.809039 0.01170 REMARK 350 BIOMT3 43 -0.309011 0.809035 0.499975 0.00880 REMARK 350 BIOMT1 44 0.808969 0.500042 0.309075 0.00118 REMARK 350 BIOMT2 44 0.500066 -0.308969 -0.808995 -0.00309 REMARK 350 BIOMT3 44 -0.309036 0.809010 -0.500000 0.01569 REMARK 350 BIOMT1 45 0.308899 0.809076 0.499977 0.00726 REMARK 350 BIOMT2 45 0.809076 -0.499881 0.309053 -0.01537 REMARK 350 BIOMT3 45 0.499977 0.309053 -0.809018 0.00585 REMARK 350 BIOMT1 46 -0.000008 1.000000 -0.000018 0.01528 REMARK 350 BIOMT2 46 -0.000026 -0.000018 -1.000000 0.00562 REMARK 350 BIOMT3 46 -1.000000 -0.000008 0.000026 0.02090 REMARK 350 BIOMT1 47 0.308979 0.809035 -0.499994 0.01415 REMARK 350 BIOMT2 47 0.809035 -0.499963 -0.309029 -0.01111 REMARK 350 BIOMT3 47 -0.499994 -0.309029 -0.809016 0.01908 REMARK 350 BIOMT1 48 0.808969 0.500066 -0.309036 0.00544 REMARK 350 BIOMT2 48 0.500042 -0.308969 0.809010 -0.01424 REMARK 350 BIOMT3 48 0.309075 -0.808995 -0.500000 0.00498 REMARK 350 BIOMT1 49 0.808992 0.500077 0.308958 0.00118 REMARK 350 BIOMT2 49 -0.499988 0.309017 0.809024 0.00055 REMARK 350 BIOMT3 49 0.309101 -0.808970 0.500025 -0.00191 REMARK 350 BIOMT1 50 0.309017 0.809053 0.499941 0.00726 REMARK 350 BIOMT2 50 -0.809047 0.499959 -0.309005 0.01283 REMARK 350 BIOMT3 50 -0.499952 -0.308988 0.809058 0.00793 REMARK 350 BIOMT1 51 0.000008 -1.000000 0.000114 0.01274 REMARK 350 BIOMT2 51 0.000106 -0.000114 -1.000000 0.00562 REMARK 350 BIOMT3 51 1.000000 0.000008 0.000106 -0.00712 REMARK 350 BIOMT1 52 -0.309057 -0.808987 0.500023 0.01387 REMARK 350 BIOMT2 52 0.809072 -0.500000 -0.308874 -0.01111 REMARK 350 BIOMT3 52 0.499887 0.309095 0.809057 -0.00530 REMARK 350 BIOMT1 53 -0.809017 -0.500036 0.308959 0.02258 REMARK 350 BIOMT2 53 0.499923 -0.308910 0.809105 -0.01424 REMARK 350 BIOMT3 53 -0.309141 0.809035 0.499893 0.00880 REMARK 350 BIOMT1 54 -0.808944 -0.500107 -0.309035 0.02684 REMARK 350 BIOMT2 54 -0.500107 0.309076 0.808929 0.00056 REMARK 350 BIOMT3 54 -0.309035 0.808929 -0.500131 0.01569 REMARK 350 BIOMT1 55 -0.308939 -0.809101 -0.499912 0.02076 REMARK 350 BIOMT2 55 -0.809011 0.499922 -0.309160 0.01283 REMARK 350 BIOMT3 55 0.500059 0.308922 -0.809017 0.00585 REMARK 350 BIOMT1 56 0.000088 -1.000000 0.000018 0.01274 REMARK 350 BIOMT2 56 -0.000106 0.000018 1.000000 -0.00816 REMARK 350 BIOMT3 56 -1.000000 -0.000088 -0.000106 0.02090 REMARK 350 BIOMT1 57 -0.308939 -0.809011 0.500059 0.01387 REMARK 350 BIOMT2 57 -0.809101 0.499922 0.308922 0.00857 REMARK 350 BIOMT3 57 -0.499912 -0.309160 -0.809017 0.01908 REMARK 350 BIOMT1 58 -0.808994 -0.500001 0.309076 0.02258 REMARK 350 BIOMT2 58 -0.500001 0.308862 -0.809075 0.01170 REMARK 350 BIOMT3 58 0.309076 -0.809075 -0.499869 0.00498 REMARK 350 BIOMT1 59 -0.809017 -0.500012 -0.308998 0.02684 REMARK 350 BIOMT2 59 0.500029 -0.309124 -0.808958 -0.00309 REMARK 350 BIOMT3 59 0.308970 -0.808969 0.500107 -0.00191 REMARK 350 BIOMT1 60 -0.308977 -0.809028 -0.500006 0.02076 REMARK 350 BIOMT2 60 0.808981 -0.500000 0.309112 -0.01537 REMARK 350 BIOMT3 60 -0.500083 -0.308987 0.808977 0.00793 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU D 14 REMARK 465 THR D 15 REMARK 465 GLY D 16 REMARK 465 LEU D 17 REMARK 465 ASN D 18 REMARK 465 ALA D 19 REMARK 465 SER D 20 REMARK 465 GLY D 21 REMARK 465 ASN D 22 REMARK 465 SER D 23 REMARK 465 ILE D 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL B 108 CG1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 41 45.14 -105.97 REMARK 500 ARG A 59 56.96 -98.72 REMARK 500 ASP A 155 50.42 -93.47 REMARK 500 TRP A 159 4.20 -69.94 REMARK 500 ILE A 246 75.34 54.52 REMARK 500 GLN B 26 -52.38 75.16 REMARK 500 ASP B 57 -62.71 74.49 REMARK 500 THR B 185 26.07 -72.58 REMARK 500 ASN B 198 -8.56 -150.37 REMARK 500 ARG B 258 -149.54 -152.46 REMARK 500 SER C 16 64.80 -118.24 REMARK 500 ASN C 63 50.35 -92.12 REMARK 500 SER C 64 -169.56 -161.08 REMARK 500 VAL C 82 -61.00 -95.37 REMARK 500 ASN C 105 1.58 -65.16 REMARK 500 THR C 196 -89.86 -126.73 REMARK 500 ARG C 223 -112.34 -122.45 REMARK 500 ALA D 36 -10.02 71.15 REMARK 500 ASP D 49 88.87 -159.08 REMARK 500 PRO E 69 152.99 -48.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-32194 RELATED DB: EMDB REMARK 900 COXSACKIEVIRUS B3 (VP3-234Q) INCUBATION WITH CD55 AT PH7.4 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE GENEBANK ACCESSION NUMBER IS KJ025083 FOR REMARK 999 THIS CAPSID PROTEIN. DBREF 7VY5 A 13 280 UNP P03313 POLG_CXB3N 583 850 DBREF 7VY5 B 8 263 UNP P03313 POLG_CXB3N 77 332 DBREF 7VY5 C 1 238 UNP P03313 POLG_CXB3N 333 570 DBREF 7VY5 D 2 69 UNP P03313 POLG_CXB3N 2 69 DBREF 7VY5 E 66 188 UNP P08174 DAF_HUMAN 98 220 SEQADV 7VY5 GLU A 80 UNP P03313 LYS 650 VARIANT SEQADV 7VY5 SER B 151 UNP P03313 THR 220 VARIANT SEQADV 7VY5 VAL C 155 UNP P03313 ILE 487 VARIANT SEQADV 7VY5 TYR C 178 UNP P03313 PHE 510 VARIANT SEQADV 7VY5 THR C 180 UNP P03313 ALA 512 VARIANT SEQADV 7VY5 GLY D 16 UNP P03313 ARG 16 VARIANT SEQRES 1 A 268 ARG VAL ALA ASP THR VAL GLY THR GLY PRO THR ASN SER SEQRES 2 A 268 GLU ALA ILE PRO ALA LEU THR ALA ALA GLU THR GLY HIS SEQRES 3 A 268 THR SER GLN VAL VAL PRO GLY ASP THR MET GLN THR ARG SEQRES 4 A 268 HIS VAL LYS ASN TYR HIS SER ARG SER GLU SER THR ILE SEQRES 5 A 268 GLU ASN PHE LEU CYS ARG SER ALA CYS VAL TYR PHE THR SEQRES 6 A 268 GLU TYR GLU ASN SER GLY ALA LYS ARG TYR ALA GLU TRP SEQRES 7 A 268 VAL LEU THR PRO ARG GLN ALA ALA GLN LEU ARG ARG LYS SEQRES 8 A 268 LEU GLU PHE PHE THR TYR VAL ARG PHE ASP LEU GLU LEU SEQRES 9 A 268 THR PHE VAL ILE THR SER THR GLN GLN PRO SER THR THR SEQRES 10 A 268 GLN ASN GLN ASP ALA GLN ILE LEU THR HIS GLN ILE MET SEQRES 11 A 268 TYR VAL PRO PRO GLY GLY PRO VAL PRO ASP LYS VAL ASP SEQRES 12 A 268 SER TYR VAL TRP GLN THR SER THR ASN PRO SER VAL PHE SEQRES 13 A 268 TRP THR GLU GLY ASN ALA PRO PRO ARG MET SER ILE PRO SEQRES 14 A 268 PHE LEU SER ILE GLY ASN ALA TYR SER ASN PHE TYR ASP SEQRES 15 A 268 GLY TRP SER GLU PHE SER ARG ASN GLY VAL TYR GLY ILE SEQRES 16 A 268 ASN THR LEU ASN ASN MET GLY THR LEU TYR ALA ARG HIS SEQRES 17 A 268 VAL ASN ALA GLY SER THR GLY PRO ILE LYS SER THR ILE SEQRES 18 A 268 ARG ILE TYR PHE LYS PRO LYS HIS VAL LYS ALA TRP ILE SEQRES 19 A 268 PRO ARG PRO PRO ARG LEU CYS GLN TYR GLU LYS ALA LYS SEQRES 20 A 268 ASN VAL ASN PHE GLN PRO SER GLY VAL THR THR THR ARG SEQRES 21 A 268 GLN SER ILE THR THR MET THR ASN SEQRES 1 B 256 GLY TYR SER ASP ARG ALA ARG SER ILE THR LEU GLY ASN SEQRES 2 B 256 SER THR ILE THR THR GLN GLU CYS ALA ASN VAL VAL VAL SEQRES 3 B 256 GLY TYR GLY VAL TRP PRO ASP TYR LEU LYS ASP SER GLU SEQRES 4 B 256 ALA THR ALA GLU ASP GLN PRO THR GLN PRO ASP VAL ALA SEQRES 5 B 256 THR CYS ARG PHE TYR THR LEU ASP SER VAL GLN TRP GLN SEQRES 6 B 256 LYS THR SER PRO GLY TRP TRP TRP LYS LEU PRO ASP ALA SEQRES 7 B 256 LEU SER ASN LEU GLY LEU PHE GLY GLN ASN MET GLN TYR SEQRES 8 B 256 HIS TYR LEU GLY ARG THR GLY TYR THR VAL HIS VAL GLN SEQRES 9 B 256 CYS ASN ALA SER LYS PHE HIS GLN GLY CYS LEU LEU VAL SEQRES 10 B 256 VAL CYS VAL PRO GLU ALA GLU MET GLY CYS ALA THR LEU SEQRES 11 B 256 ASP ASN THR PRO SER SER ALA GLU LEU LEU GLY GLY ASP SEQRES 12 B 256 SER ALA LYS GLU PHE ALA ASP LYS PRO VAL ALA SER GLY SEQRES 13 B 256 SER ASN LYS LEU VAL GLN ARG VAL VAL TYR ASN ALA GLY SEQRES 14 B 256 MET GLY VAL GLY VAL GLY ASN LEU THR ILE PHE PRO HIS SEQRES 15 B 256 GLN TRP ILE ASN LEU ARG THR ASN ASN SER ALA THR ILE SEQRES 16 B 256 VAL MET PRO TYR THR ASN SER VAL PRO MET ASP ASN MET SEQRES 17 B 256 PHE ARG HIS ASN ASN VAL THR LEU MET VAL ILE PRO PHE SEQRES 18 B 256 VAL PRO LEU ASP TYR CYS PRO GLY SER THR THR TYR VAL SEQRES 19 B 256 PRO ILE THR VAL THR ILE ALA PRO MET CYS ALA GLU TYR SEQRES 20 B 256 ASN GLY LEU ARG LEU ALA GLY HIS GLN SEQRES 1 C 238 GLY LEU PRO THR MET ASN THR PRO GLY SER CYS GLN PHE SEQRES 2 C 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 C 238 GLN TYR ASP VAL THR PRO GLU MET ARG ILE PRO GLY GLU SEQRES 4 C 238 VAL LYS ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 C 238 VAL PRO VAL GLN ASN VAL GLY GLU LYS VAL ASN SER MET SEQRES 6 C 238 GLU ALA TYR GLN ILE PRO VAL ARG SER ASN GLU GLY SER SEQRES 7 C 238 GLY THR GLN VAL PHE GLY PHE PRO LEU GLN PRO GLY TYR SEQRES 8 C 238 SER SER VAL PHE SER ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR THR HIS TRP SER GLY SER ILE LYS LEU THR SEQRES 10 C 238 PHE MET PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 C 238 LEU LEU ALA TYR SER PRO PRO GLY ALA GLY ALA PRO THR SEQRES 12 C 238 LYS ARG VAL ASP ALA MET LEU GLY THR HIS VAL VAL TRP SEQRES 13 C 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS ILE PRO SEQRES 14 C 238 TRP ILE SER GLN THR HIS TYR ARG TYR VAL THR SER ASP SEQRES 15 C 238 GLU TYR THR ALA GLY GLY PHE ILE THR CYS TRP TYR GLN SEQRES 16 C 238 THR ASN ILE VAL VAL PRO ALA ASP ALA GLN SER SER CYS SEQRES 17 C 238 TYR ILE MET CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG LEU LEU LYS ASP THR PRO PHE ILE SER GLN GLN SEQRES 19 C 238 ASN PHE PHE GLN SEQRES 1 D 68 GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS GLU SEQRES 2 D 68 THR GLY LEU ASN ALA SER GLY ASN SER ILE ILE HIS TYR SEQRES 3 D 68 THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SER SEQRES 4 D 68 ALA ASN ARG GLN ASP PHE THR GLN ASP PRO GLY LYS PHE SEQRES 5 D 68 THR GLU PRO VAL LYS ASP ILE MET ILE LYS SER LEU PRO SEQRES 6 D 68 ALA LEU ASN SEQRES 1 E 123 CYS GLU VAL PRO THR ARG LEU ASN SER ALA SER LEU LYS SEQRES 2 E 123 GLN PRO TYR ILE THR GLN ASN TYR PHE PRO VAL GLY THR SEQRES 3 E 123 VAL VAL GLU TYR GLU CYS ARG PRO GLY TYR ARG ARG GLU SEQRES 4 E 123 PRO SER LEU SER PRO LYS LEU THR CYS LEU GLN ASN LEU SEQRES 5 E 123 LYS TRP SER THR ALA VAL GLU PHE CYS LYS LYS LYS SER SEQRES 6 E 123 CYS PRO ASN PRO GLY GLU ILE ARG ASN GLY GLN ILE ASP SEQRES 7 E 123 VAL PRO GLY GLY ILE LEU PHE GLY ALA THR ILE SER PHE SEQRES 8 E 123 SER CYS ASN THR GLY TYR LYS LEU PHE GLY SER THR SER SEQRES 9 E 123 SER PHE CYS LEU ILE SER GLY SER SER VAL GLN TRP SER SEQRES 10 E 123 ASP PRO LEU PRO GLU CYS HET PLM A 300 18 HETNAM PLM PALMITIC ACID FORMUL 6 PLM C16 H32 O2 HELIX 1 AA1 ALA A 33 GLY A 37 5 5 HELIX 2 AA2 VAL A 43 THR A 47 5 5 HELIX 3 AA3 THR A 63 CYS A 69 1 7 HELIX 4 AA4 ALA A 98 GLU A 105 1 8 HELIX 5 AA5 TYR A 157 THR A 161 5 5 HELIX 6 AA6 GLY A 206 LEU A 210 5 5 HELIX 7 AA7 LEU B 82 LEU B 86 1 5 HELIX 8 AA8 LEU B 89 TYR B 98 1 10 HELIX 9 AA9 SER B 142 LEU B 147 1 6 HELIX 10 AB1 GLY B 180 THR B 185 5 6 HELIX 11 AB2 ASN C 42 GLU C 48 1 7 HELIX 12 AB3 VAL C 58 SER C 64 5 7 HELIX 13 AB4 MET C 65 GLN C 69 5 5 HELIX 14 AB5 THR C 98 ASN C 105 1 8 HELIX 15 AB6 LYS C 144 LEU C 150 1 7 HELIX 16 AB7 LYS E 78 GLN E 84 1 7 SHEET 1 AA1 4 ALA A 72 GLU A 80 0 SHEET 2 AA1 4 ILE A 229 PRO A 247 -1 O SER A 231 N TYR A 79 SHEET 3 AA1 4 PHE A 107 GLN A 124 -1 N THR A 117 O TYR A 236 SHEET 4 AA1 4 TYR A 189 SER A 190 -1 O TYR A 189 N VAL A 110 SHEET 1 AA2 4 ARG A 177 ILE A 180 0 SHEET 2 AA2 4 PHE A 107 GLN A 124 -1 N LEU A 114 O ILE A 180 SHEET 3 AA2 4 ILE A 229 PRO A 247 -1 O TYR A 236 N THR A 117 SHEET 4 AA2 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 244 SHEET 1 AA3 4 TYR A 87 VAL A 91 0 SHEET 2 AA3 4 THR A 215 HIS A 220 -1 O LEU A 216 N TRP A 90 SHEET 3 AA3 4 THR A 138 VAL A 144 -1 N MET A 142 O TYR A 217 SHEET 4 AA3 4 SER A 166 THR A 170 -1 O TRP A 169 N HIS A 139 SHEET 1 AA4 2 SER B 15 LEU B 18 0 SHEET 2 AA4 2 SER B 21 THR B 24 -1 O SER B 21 N LEU B 18 SHEET 1 AA5 5 VAL B 32 VAL B 33 0 SHEET 2 AA5 5 SER B 199 MET B 204 1 O VAL B 203 N VAL B 32 SHEET 3 AA5 5 HIS B 99 GLN B 111 -1 N VAL B 108 O ILE B 202 SHEET 4 AA5 5 PRO B 242 ILE B 247 -1 O THR B 246 N HIS B 109 SHEET 5 AA5 5 VAL B 69 GLN B 70 -1 N VAL B 69 O ILE B 243 SHEET 1 AA6 4 TYR B 64 THR B 65 0 SHEET 2 AA6 4 PRO B 242 ILE B 247 -1 O ILE B 247 N TYR B 64 SHEET 3 AA6 4 HIS B 99 GLN B 111 -1 N HIS B 109 O THR B 246 SHEET 4 AA6 4 MET B 250 LEU B 257 -1 O MET B 250 N GLY B 105 SHEET 1 AA7 5 LYS B 153 GLU B 154 0 SHEET 2 AA7 5 TRP B 78 LYS B 81 -1 N TRP B 79 O LYS B 153 SHEET 3 AA7 5 VAL B 221 ASP B 232 -1 O LEU B 223 N TRP B 80 SHEET 4 AA7 5 GLN B 119 PRO B 128 -1 N VAL B 127 O THR B 222 SHEET 5 AA7 5 HIS B 189 ASN B 193 -1 O GLN B 190 N VAL B 124 SHEET 1 AA8 3 SER C 51 VAL C 52 0 SHEET 2 AA8 3 CYS C 208 ALA C 216 -1 O VAL C 214 N SER C 51 SHEET 3 AA8 3 ILE C 70 VAL C 72 -1 N ILE C 70 O ILE C 210 SHEET 1 AA9 4 SER C 51 VAL C 52 0 SHEET 2 AA9 4 CYS C 208 ALA C 216 -1 O VAL C 214 N SER C 51 SHEET 3 AA9 4 ILE C 114 PHE C 120 -1 N LYS C 115 O SER C 215 SHEET 4 AA9 4 SER C 163 ILE C 168 -1 O LEU C 166 N LEU C 116 SHEET 1 AB1 4 GLN C 81 PRO C 86 0 SHEET 2 AB1 4 PHE C 189 TYR C 194 -1 O ILE C 190 N PHE C 85 SHEET 3 AB1 4 LYS C 129 SER C 135 -1 N ALA C 133 O THR C 191 SHEET 4 AB1 4 THR C 152 ASP C 157 -1 O THR C 152 N TYR C 134 SHEET 1 AB2 3 ARG C 177 TYR C 178 0 SHEET 2 AB2 3 HIS C 109 SER C 111 -1 N TRP C 110 O ARG C 177 SHEET 3 AB2 3 SER C 221 VAL C 222 -1 O SER C 221 N SER C 111 SHEET 1 AB3 2 GLN D 4 THR D 7 0 SHEET 2 AB3 2 HIS D 26 ASN D 29 -1 O ASN D 29 N GLN D 4 SHEET 1 AB4 3 ALA E 75 LEU E 77 0 SHEET 2 AB4 3 VAL E 92 CYS E 97 -1 O GLU E 96 N SER E 76 SHEET 3 AB4 3 LYS E 110 THR E 112 -1 O LEU E 111 N VAL E 93 SHEET 1 AB5 2 TYR E 101 ARG E 103 0 SHEET 2 AB5 2 CYS E 126 LYS E 128 -1 O LYS E 127 N ARG E 102 SHEET 1 AB6 4 GLY E 140 ILE E 142 0 SHEET 2 AB6 4 THR E 153 CYS E 158 -1 O SER E 157 N GLN E 141 SHEET 3 AB6 4 SER E 169 SER E 175 -1 O SER E 170 N ILE E 154 SHEET 4 AB6 4 SER E 178 TRP E 181 -1 O GLN E 180 N LEU E 173 SSBOND 1 CYS E 66 CYS E 113 1555 1555 2.03 SSBOND 2 CYS E 97 CYS E 126 1555 1555 2.05 SSBOND 3 CYS E 131 CYS E 172 1555 1555 2.03 SSBOND 4 CYS E 158 CYS E 188 1555 1555 2.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000