HEADER TRANSFERASE 15-NOV-21 7VYP TITLE THE STRUCTURE OF GDMN COMPLEX WITH THE NATURAL TETRAHEDRAL TITLE 2 INTERMEDIATE, CARBAMOYLATED DERIVATIVE, AND AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDMN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES HYGROSCOPICUS; SOURCE 3 ORGANISM_TAXID: 1912; SOURCE 4 GENE: GDMN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS CARBAMOYLATION, TRANSFERASE, ANSAMYCINS ANTIBIOTICS, HOMODIMER EXPDTA X-RAY DIFFRACTION AUTHOR J.WEI,J.ZHENG,J.ZHOU,Q.KANG,L.BAI REVDAT 2 29-NOV-23 7VYP 1 REMARK REVDAT 1 16-NOV-22 7VYP 0 JRNL AUTH J.WEI,X.ZHANG,Y.ZHOU,X.CHENG,Z.LIN,M.TANG,J.ZHENG,B.WANG, JRNL AUTH 2 Q.KANG,L.BAI JRNL TITL ENDOWING HOMODIMERIC CARBAMOYLTRANSFERASE GDMN WITH JRNL TITL 2 ITERATIVE FUNCTIONS THROUGH STRUCTURAL CHARACTERIZATION AND JRNL TITL 3 MECHANISTIC STUDIES. JRNL REF NAT COMMUN V. 13 6617 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36329057 JRNL DOI 10.1038/S41467-022-34387-2 REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1845 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.7600 - 6.7400 0.99 2939 168 0.1430 0.1486 REMARK 3 2 6.7400 - 5.3700 1.00 2839 136 0.1722 0.2084 REMARK 3 3 5.3700 - 4.6900 1.00 2824 148 0.1486 0.1920 REMARK 3 4 4.6900 - 4.2600 1.00 2753 155 0.1362 0.1860 REMARK 3 5 4.2600 - 3.9600 1.00 2790 138 0.1538 0.2049 REMARK 3 6 3.9600 - 3.7300 1.00 2757 148 0.1632 0.2132 REMARK 3 7 3.7300 - 3.5400 1.00 2764 162 0.1722 0.2316 REMARK 3 8 3.5400 - 3.3900 1.00 2761 131 0.1785 0.2819 REMARK 3 9 3.3900 - 3.2600 1.00 2741 122 0.2061 0.2999 REMARK 3 10 3.2600 - 3.1400 1.00 2796 125 0.2106 0.2723 REMARK 3 11 3.1400 - 3.0500 1.00 2742 146 0.2084 0.3262 REMARK 3 12 3.0500 - 2.9600 1.00 2725 152 0.1883 0.2628 REMARK 3 13 2.9600 - 2.8800 1.00 2755 114 0.1947 0.2691 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.296 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.154 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 10778 REMARK 3 ANGLE : 1.058 14669 REMARK 3 CHIRALITY : 0.057 1618 REMARK 3 PLANARITY : 0.009 1924 REMARK 3 DIHEDRAL : 9.830 1521 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7VYP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 V716.1 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 V716.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38176 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : 0.12900 REMARK 200 FOR THE DATA SET : 21.1670 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.19.2_4158 REMARK 200 STARTING MODEL: 3VEN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE MONOHYDRATE, REMARK 280 POLYETHYLENE GLYCOL 3,350, TRIS, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.09200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 154.18400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 154.18400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.09200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 675 REMARK 465 ASP A 676 REMARK 465 ASP A 677 REMARK 465 GLY A 678 REMARK 465 THR A 679 REMARK 465 ARG A 680 REMARK 465 GLY A 681 REMARK 465 HIS A 682 REMARK 465 ALA B 675 REMARK 465 ASP B 676 REMARK 465 ASP B 677 REMARK 465 GLY B 678 REMARK 465 THR B 679 REMARK 465 ARG B 680 REMARK 465 GLY B 681 REMARK 465 HIS B 682 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 433 CG CD OE1 OE2 REMARK 470 GLN B 20 CG CD OE1 NE2 REMARK 470 ARG B 353 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 356 CG CD CE NZ REMARK 470 ARG B 370 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 371 CG CD OE1 OE2 REMARK 470 ARG B 374 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 390 CG OD1 OD2 REMARK 470 LYS B 443 CG CD CE NZ REMARK 470 ARG B 445 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 446 CG CD OE1 OE2 REMARK 470 ARG B 449 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 618 CG CD CE NZ REMARK 470 LEU B 674 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 9 -158.64 -87.18 REMARK 500 PHE A 26 81.77 67.91 REMARK 500 LYS A 52 129.01 -39.44 REMARK 500 ASP A 156 -158.73 -144.24 REMARK 500 PRO A 216 0.39 -67.40 REMARK 500 HIS A 332 -162.14 -78.99 REMARK 500 VAL A 442 -80.49 -88.53 REMARK 500 LEU A 490 70.05 -104.82 REMARK 500 ASN A 535 143.72 -176.13 REMARK 500 ALA A 571 -73.59 -52.88 REMARK 500 LEU B 21 125.03 -37.71 REMARK 500 PHE B 26 72.57 69.53 REMARK 500 PRO B 58 47.44 -80.78 REMARK 500 ARG B 158 146.27 -178.15 REMARK 500 TRP B 213 3.22 -63.39 REMARK 500 ALA B 330 79.38 -114.40 REMARK 500 HIS B 332 -165.49 -77.40 REMARK 500 LEU B 348 -88.47 -91.13 REMARK 500 LYS B 356 -167.80 -109.69 REMARK 500 PHE B 388 73.92 -119.21 REMARK 500 ARG B 435 -74.79 -58.70 REMARK 500 ASN B 439 -76.68 -69.40 REMARK 500 ALA B 440 24.48 -74.31 REMARK 500 MET B 441 -74.28 -146.14 REMARK 500 LYS B 444 68.22 60.45 REMARK 500 ARG B 445 -148.31 -136.38 REMARK 500 SER B 467 -170.82 -67.12 REMARK 500 LEU B 490 78.01 -101.91 REMARK 500 GLU B 511 -70.61 -55.86 REMARK 500 PRO B 527 37.96 -83.44 REMARK 500 ASN B 535 142.29 -170.71 REMARK 500 ASP B 556 41.78 -106.51 REMARK 500 THR B 633 -52.59 -124.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 701 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 133 NE2 REMARK 620 2 HIS A 137 NE2 95.6 REMARK 620 3 ASP A 156 OD2 88.8 126.8 REMARK 620 4 ASP A 333 OD1 80.2 82.3 150.0 REMARK 620 5 AMP A 715 O3P 118.4 132.8 88.0 73.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 702 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 133 NE2 REMARK 620 2 HIS B 137 NE2 91.5 REMARK 620 3 ASP B 156 OD2 88.5 107.7 REMARK 620 4 ASP B 333 OD1 92.2 96.8 155.5 REMARK 620 5 8CW B 701 N50 84.1 169.6 81.7 74.1 REMARK 620 6 8CW B 701 O52 164.3 91.7 105.1 72.1 90.1 REMARK 620 N 1 2 3 4 5 DBREF 7VYP A 1 682 UNP Q84G19 Q84G19_STRHY 1 682 DBREF 7VYP B 1 682 UNP Q84G19 Q84G19_STRHY 1 682 SEQRES 1 A 682 MET LEU VAL LEU GLY LEU ASN GLY ASN PHE SER ALA ALA SEQRES 2 A 682 ASP THR ASP VAL VAL PRO GLN LEU GLY GLU VAL PHE PHE SEQRES 3 A 682 HIS ASP SER ALA ALA SER LEU ILE ARG ASP GLY GLU LEU SEQRES 4 A 682 VAL ALA ALA VAL GLU GLU GLU ARG LEU ASN ARG ILE LYS SEQRES 5 A 682 LYS THR THR LYS PHE PRO LEU ASN ALA VAL ARG GLU CYS SEQRES 6 A 682 LEU ALA LEU ALA GLY ALA ARG PRO GLU ASP VAL ASP ALA SEQRES 7 A 682 VAL GLY TYR TYR PHE PRO GLU ASN HIS ILE ASP THR VAL SEQRES 8 A 682 LEU ASN HIS LEU TYR THR GLU TYR PRO ARG ALA PRO LEU SEQRES 9 A 682 ARG TYR SER ARG GLU LEU ILE ARG GLN ARG LEU LYS GLU SEQRES 10 A 682 GLY LEU GLY TRP ASP LEU PRO ASP GLU LYS LEU VAL TYR SEQRES 11 A 682 VAL PRO HIS HIS GLU ALA HIS ALA TYR SER SER TYR LEU SEQRES 12 A 682 HIS SER GLY MET ASP SER ALA LEU VAL LEU VAL LEU ASP SEQRES 13 A 682 GLY ARG GLY GLU LEU HIS SER GLY THR VAL TYR ARG ALA SEQRES 14 A 682 GLU GLY THR ARG LEU GLU LYS LEU ALA ASP TYR PRO VAL SEQRES 15 A 682 PRO LYS SER LEU GLY GLY LEU TYR LEU ASN ALA THR TYR SEQRES 16 A 682 LEU LEU GLY TYR GLY PHE GLY ASP GLU TYR LYS VAL MET SEQRES 17 A 682 GLY LEU ALA PRO TRP GLY ASN PRO GLU THR TYR ARG ASP SEQRES 18 A 682 THR PHE ALA LYS LEU TYR THR LEU GLN ASP ASN GLY GLU SEQRES 19 A 682 TYR GLU LEU HIS GLY ASN ILE MET VAL PRO ASN LEU VAL SEQRES 20 A 682 SER PRO LEU PHE TYR ALA GLU GLY PHE ARG PRO ARG ARG SEQRES 21 A 682 LYS GLY GLU PRO PHE THR GLN ALA HIS ARG ASP PHE ALA SEQRES 22 A 682 ALA ALA LEU GLN GLU THR VAL GLU LYS ILE VAL LEU HIS SEQRES 23 A 682 ILE LEU GLU TYR TRP ALA LYS THR SER GLY HIS SER ARG SEQRES 24 A 682 LEU CYS PHE GLY GLY GLY VAL ALA HIS ASN SER SER LEU SEQRES 25 A 682 ASN GLY LEU ILE LEU LYS SER GLY LEU PHE ASP GLU VAL SEQRES 26 A 682 PHE VAL HIS PRO ALA SER HIS ASP ALA GLY ALA GLY GLU SEQRES 27 A 682 GLY ALA ALA TYR ALA ALA ALA ALA SER LEU GLY THR LEU SEQRES 28 A 682 GLU ARG PRO GLY LYS ARG LEU LEU SER ALA SER LEU GLY SEQRES 29 A 682 PRO ALA LEU GLY GLY ARG GLU GLN ILE ARG ALA ARG LEU SEQRES 30 A 682 ALA ASP TRP ALA PRO LEU ILE ASP VAL GLU PHE PRO ASP SEQRES 31 A 682 ASP ALA VAL GLU THR ALA ALA GLY LEU LEU ALA GLU GLY SEQRES 32 A 682 GLN VAL LEU GLY TRP ALA TYR GLY ARG SER GLU PHE GLY SEQRES 33 A 682 PRO ARG ALA LEU GLY HIS ARG SER ILE VAL ALA ASP ALA SEQRES 34 A 682 ARG PRO GLU GLU ASN ARG THR ARG ILE ASN ALA MET VAL SEQRES 35 A 682 LYS LYS ARG GLU GLY PHE ARG PRO PHE ALA PRO VAL VAL SEQRES 36 A 682 THR ALA GLU ALA ALA ARG ASP TYR PHE ASP LEU SER GLY SEQRES 37 A 682 ALA ASP GLY ASN HIS GLU PHE MET SER PHE VAL VAL PRO SEQRES 38 A 682 VAL LEU PRO GLU ARG ARG THR GLU LEU GLY ALA VAL THR SEQRES 39 A 682 HIS VAL ASP GLY THR ALA ARG VAL GLN VAL VAL SER ALA SEQRES 40 A 682 GLU SER GLY GLU ARG PHE HIS ARG LEU VAL ARG ARG PHE SEQRES 41 A 682 GLY GLU LEU THR GLY THR PRO VAL LEU LEU ASN THR SER SEQRES 42 A 682 PHE ASN ASN ASN ALA GLU PRO ILE VAL GLN SER LEU ASP SEQRES 43 A 682 ASP VAL VAL THR SER PHE LEU THR THR ASP LEU ASP VAL SEQRES 44 A 682 LEU VAL VAL GLU ASP CYS LEU VAL ARG GLY LYS ALA SER SEQRES 45 A 682 PRO ASP LEU GLY VAL LEU VAL PRO ARG PHE ARG PRO VAL SEQRES 46 A 682 THR ARG LEU VAL GLU ARG ARG THR ALA GLY PRO ASP ALA SEQRES 47 A 682 SER ALA GLY ALA LYS THR HIS GLU ILE HIS LEU ASP TYR SEQRES 48 A 682 ASP GLY GLY PRO SER ALA LYS VAL SER PRO GLU LEU TYR SEQRES 49 A 682 GLU LEU LEU GLY ALA VAL ASP GLY THR THR THR LEU GLY SEQRES 50 A 682 ASP LEU ALA LYS THR VAL GLY GLY LEU SER ASP ALA LEU SEQRES 51 A 682 ALA THR GLU VAL PHE ALA LEU TRP GLU GLN ARG PHE LEU SEQRES 52 A 682 THR LEU ALA PRO ALA GLY ASP ILE GLY PRO LEU ALA ASP SEQRES 53 A 682 ASP GLY THR ARG GLY HIS SEQRES 1 B 682 MET LEU VAL LEU GLY LEU ASN GLY ASN PHE SER ALA ALA SEQRES 2 B 682 ASP THR ASP VAL VAL PRO GLN LEU GLY GLU VAL PHE PHE SEQRES 3 B 682 HIS ASP SER ALA ALA SER LEU ILE ARG ASP GLY GLU LEU SEQRES 4 B 682 VAL ALA ALA VAL GLU GLU GLU ARG LEU ASN ARG ILE LYS SEQRES 5 B 682 LYS THR THR LYS PHE PRO LEU ASN ALA VAL ARG GLU CYS SEQRES 6 B 682 LEU ALA LEU ALA GLY ALA ARG PRO GLU ASP VAL ASP ALA SEQRES 7 B 682 VAL GLY TYR TYR PHE PRO GLU ASN HIS ILE ASP THR VAL SEQRES 8 B 682 LEU ASN HIS LEU TYR THR GLU TYR PRO ARG ALA PRO LEU SEQRES 9 B 682 ARG TYR SER ARG GLU LEU ILE ARG GLN ARG LEU LYS GLU SEQRES 10 B 682 GLY LEU GLY TRP ASP LEU PRO ASP GLU LYS LEU VAL TYR SEQRES 11 B 682 VAL PRO HIS HIS GLU ALA HIS ALA TYR SER SER TYR LEU SEQRES 12 B 682 HIS SER GLY MET ASP SER ALA LEU VAL LEU VAL LEU ASP SEQRES 13 B 682 GLY ARG GLY GLU LEU HIS SER GLY THR VAL TYR ARG ALA SEQRES 14 B 682 GLU GLY THR ARG LEU GLU LYS LEU ALA ASP TYR PRO VAL SEQRES 15 B 682 PRO LYS SER LEU GLY GLY LEU TYR LEU ASN ALA THR TYR SEQRES 16 B 682 LEU LEU GLY TYR GLY PHE GLY ASP GLU TYR LYS VAL MET SEQRES 17 B 682 GLY LEU ALA PRO TRP GLY ASN PRO GLU THR TYR ARG ASP SEQRES 18 B 682 THR PHE ALA LYS LEU TYR THR LEU GLN ASP ASN GLY GLU SEQRES 19 B 682 TYR GLU LEU HIS GLY ASN ILE MET VAL PRO ASN LEU VAL SEQRES 20 B 682 SER PRO LEU PHE TYR ALA GLU GLY PHE ARG PRO ARG ARG SEQRES 21 B 682 LYS GLY GLU PRO PHE THR GLN ALA HIS ARG ASP PHE ALA SEQRES 22 B 682 ALA ALA LEU GLN GLU THR VAL GLU LYS ILE VAL LEU HIS SEQRES 23 B 682 ILE LEU GLU TYR TRP ALA LYS THR SER GLY HIS SER ARG SEQRES 24 B 682 LEU CYS PHE GLY GLY GLY VAL ALA HIS ASN SER SER LEU SEQRES 25 B 682 ASN GLY LEU ILE LEU LYS SER GLY LEU PHE ASP GLU VAL SEQRES 26 B 682 PHE VAL HIS PRO ALA SER HIS ASP ALA GLY ALA GLY GLU SEQRES 27 B 682 GLY ALA ALA TYR ALA ALA ALA ALA SER LEU GLY THR LEU SEQRES 28 B 682 GLU ARG PRO GLY LYS ARG LEU LEU SER ALA SER LEU GLY SEQRES 29 B 682 PRO ALA LEU GLY GLY ARG GLU GLN ILE ARG ALA ARG LEU SEQRES 30 B 682 ALA ASP TRP ALA PRO LEU ILE ASP VAL GLU PHE PRO ASP SEQRES 31 B 682 ASP ALA VAL GLU THR ALA ALA GLY LEU LEU ALA GLU GLY SEQRES 32 B 682 GLN VAL LEU GLY TRP ALA TYR GLY ARG SER GLU PHE GLY SEQRES 33 B 682 PRO ARG ALA LEU GLY HIS ARG SER ILE VAL ALA ASP ALA SEQRES 34 B 682 ARG PRO GLU GLU ASN ARG THR ARG ILE ASN ALA MET VAL SEQRES 35 B 682 LYS LYS ARG GLU GLY PHE ARG PRO PHE ALA PRO VAL VAL SEQRES 36 B 682 THR ALA GLU ALA ALA ARG ASP TYR PHE ASP LEU SER GLY SEQRES 37 B 682 ALA ASP GLY ASN HIS GLU PHE MET SER PHE VAL VAL PRO SEQRES 38 B 682 VAL LEU PRO GLU ARG ARG THR GLU LEU GLY ALA VAL THR SEQRES 39 B 682 HIS VAL ASP GLY THR ALA ARG VAL GLN VAL VAL SER ALA SEQRES 40 B 682 GLU SER GLY GLU ARG PHE HIS ARG LEU VAL ARG ARG PHE SEQRES 41 B 682 GLY GLU LEU THR GLY THR PRO VAL LEU LEU ASN THR SER SEQRES 42 B 682 PHE ASN ASN ASN ALA GLU PRO ILE VAL GLN SER LEU ASP SEQRES 43 B 682 ASP VAL VAL THR SER PHE LEU THR THR ASP LEU ASP VAL SEQRES 44 B 682 LEU VAL VAL GLU ASP CYS LEU VAL ARG GLY LYS ALA SER SEQRES 45 B 682 PRO ASP LEU GLY VAL LEU VAL PRO ARG PHE ARG PRO VAL SEQRES 46 B 682 THR ARG LEU VAL GLU ARG ARG THR ALA GLY PRO ASP ALA SEQRES 47 B 682 SER ALA GLY ALA LYS THR HIS GLU ILE HIS LEU ASP TYR SEQRES 48 B 682 ASP GLY GLY PRO SER ALA LYS VAL SER PRO GLU LEU TYR SEQRES 49 B 682 GLU LEU LEU GLY ALA VAL ASP GLY THR THR THR LEU GLY SEQRES 50 B 682 ASP LEU ALA LYS THR VAL GLY GLY LEU SER ASP ALA LEU SEQRES 51 B 682 ALA THR GLU VAL PHE ALA LEU TRP GLU GLN ARG PHE LEU SEQRES 52 B 682 THR LEU ALA PRO ALA GLY ASP ILE GLY PRO LEU ALA ASP SEQRES 53 B 682 ASP GLY THR ARG GLY HIS HET FE A 701 1 HET SO4 A 702 5 HET SO4 A 703 5 HET SO4 A 704 5 HET SO4 A 705 5 HET SO4 A 706 5 HET CP A 707 8 HET EDO A 708 4 HET EDO A 709 4 HET EDO A 710 4 HET EDO A 711 4 HET EDO A 712 4 HET EDO A 713 4 HET 82Z A 714 37 HET AMP A 715 23 HET 8CW B 701 60 HET FE B 702 1 HET SO4 B 703 5 HET SO4 B 704 5 HET SO4 B 705 5 HET EDO B 706 4 HET EDO B 707 4 HET EDO B 708 4 HET EDO B 709 4 HETNAM FE FE (III) ION HETNAM SO4 SULFATE ION HETNAM CP PHOSPHORIC ACID MONO(FORMAMIDE)ESTER HETNAM EDO 1,2-ETHANEDIOL HETNAM 82Z [(5S,6E,8S,9S,12R,13E,15E)-21-CHLORANYL-12,20- HETNAM 2 82Z DIMETHOXY-6,8,16-TRIMETHYL-5-OXIDANYL-3,11- HETNAM 3 82Z BIS(OXIDANYLIDENE)-2-AZABICYCLO[16.3.1]DOCOSA-1(21),6, HETNAM 4 82Z 13,15,18(22),19-HEXAEN-9-YL] CARBAMATE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM 8CW [(2~{R},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-3,4- HETNAM 2 8CW BIS(OXIDANYL)OXOLAN-2-YL]METHYL [(~{S})-AZANYL- HETNAM 3 8CW [[(5~{S},6~{E},8~{S},9~{S},12~{R},13~{E},15~{E})-21- HETNAM 4 8CW CHLORANYL-12,20-DIMETHOXY-6,8,16-TRIMETHYL-5-OXIDANYL- HETNAM 5 8CW 3,11-BIS(OXIDANYLIDENE)-2-AZABICYCLO[16.3.1]DOCOSA- HETNAM 6 8CW 1(21),6,13,15,18(22),19-HEXAEN-9-YL]OXY]-OXIDANYL- HETNAM 7 8CW METHYL] HYDROGEN PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 FE 2(FE 3+) FORMUL 4 SO4 8(O4 S 2-) FORMUL 9 CP C H4 N O5 P FORMUL 10 EDO 10(C2 H6 O2) FORMUL 16 82Z C27 H35 CL N2 O7 FORMUL 17 AMP C10 H14 N5 O7 P FORMUL 18 8CW C37 H49 CL N7 O14 P FORMUL 27 HOH *70(H2 O) HELIX 1 AA1 GLU A 45 ARG A 50 1 6 HELIX 2 AA2 PRO A 58 GLY A 70 1 13 HELIX 3 AA3 ARG A 72 VAL A 76 5 5 HELIX 4 AA4 PRO A 84 TYR A 99 1 16 HELIX 5 AA5 TYR A 106 GLY A 120 1 15 HELIX 6 AA6 PRO A 124 GLU A 126 5 3 HELIX 7 AA7 PRO A 132 HIS A 144 1 13 HELIX 8 AA8 SER A 185 LEU A 197 1 13 HELIX 9 AA9 ASP A 203 ALA A 211 1 9 HELIX 10 AB1 PRO A 212 GLY A 214 5 3 HELIX 11 AB2 PRO A 216 LYS A 225 1 10 HELIX 12 AB3 VAL A 247 GLU A 254 1 8 HELIX 13 AB4 THR A 266 GLY A 296 1 31 HELIX 14 AB5 GLY A 304 HIS A 308 5 5 HELIX 15 AB6 ASN A 309 SER A 319 1 11 HELIX 16 AB7 HIS A 332 LEU A 348 1 17 HELIX 17 AB8 GLY A 369 TRP A 380 1 12 HELIX 18 AB9 ASP A 391 GLU A 402 1 12 HELIX 19 AC1 GLU A 432 MET A 441 1 10 HELIX 20 AC2 ALA A 459 TYR A 463 5 5 HELIX 21 AC3 LEU A 483 ARG A 487 5 5 HELIX 22 AC4 GLY A 510 GLY A 525 1 16 HELIX 23 AC5 SER A 544 THR A 554 1 11 HELIX 24 AC6 ASP A 574 GLY A 576 5 3 HELIX 25 AC7 GLY A 595 SER A 599 5 5 HELIX 26 AC8 SER A 620 GLY A 628 1 9 HELIX 27 AC9 THR A 635 THR A 642 1 8 HELIX 28 AD1 SER A 647 GLN A 660 1 14 HELIX 29 AD2 GLU B 45 ARG B 50 1 6 HELIX 30 AD3 PRO B 58 ALA B 69 1 12 HELIX 31 AD4 PRO B 84 TYR B 99 1 16 HELIX 32 AD5 TYR B 106 GLY B 120 1 15 HELIX 33 AD6 PRO B 124 GLU B 126 5 3 HELIX 34 AD7 PRO B 132 HIS B 144 1 13 HELIX 35 AD8 SER B 185 LEU B 196 1 12 HELIX 36 AD9 ASP B 203 ALA B 211 1 9 HELIX 37 AE1 PRO B 212 GLY B 214 5 3 HELIX 38 AE2 TYR B 219 ALA B 224 1 6 HELIX 39 AE3 VAL B 247 GLU B 254 1 8 HELIX 40 AE4 THR B 266 GLY B 296 1 31 HELIX 41 AE5 GLY B 304 HIS B 308 5 5 HELIX 42 AE6 ASN B 309 SER B 319 1 11 HELIX 43 AE7 HIS B 332 GLY B 349 1 18 HELIX 44 AE8 GLY B 369 TRP B 380 1 12 HELIX 45 AE9 ASP B 391 GLY B 403 1 13 HELIX 46 AF1 GLU B 433 ASN B 439 1 7 HELIX 47 AF2 ALA B 459 PHE B 464 1 6 HELIX 48 AF3 LEU B 483 ARG B 487 5 5 HELIX 49 AF4 GLY B 510 GLY B 525 1 16 HELIX 50 AF5 SER B 544 THR B 554 1 11 HELIX 51 AF6 ASP B 574 LEU B 578 5 5 HELIX 52 AF7 PRO B 596 ALA B 598 5 3 HELIX 53 AF8 SER B 620 GLY B 628 1 9 HELIX 54 AF9 THR B 635 LYS B 641 1 7 HELIX 55 AG1 THR B 642 GLY B 644 5 3 HELIX 56 AG2 SER B 647 GLN B 660 1 14 SHEET 1 AA1 5 GLU A 38 GLU A 44 0 SHEET 2 AA1 5 ALA A 30 ARG A 35 -1 N ARG A 35 O GLU A 38 SHEET 3 AA1 5 LEU A 2 ASN A 7 -1 N GLY A 5 O SER A 32 SHEET 4 AA1 5 ALA A 78 TYR A 81 1 O GLY A 80 N LEU A 4 SHEET 5 AA1 5 LEU A 128 TYR A 130 1 O VAL A 129 N VAL A 79 SHEET 1 AA2 6 ARG A 173 PRO A 181 0 SHEET 2 AA2 6 HIS A 162 GLU A 170 -1 N ARG A 168 O GLU A 175 SHEET 3 AA2 6 SER A 149 LEU A 155 -1 N VAL A 152 O TYR A 167 SHEET 4 AA2 6 ARG A 299 GLY A 303 1 O CYS A 301 N LEU A 153 SHEET 5 AA2 6 GLU A 324 VAL A 327 1 O PHE A 326 N LEU A 300 SHEET 6 AA2 6 ASP A 470 GLY A 471 1 O ASP A 470 N VAL A 325 SHEET 1 AA3 2 TYR A 227 LEU A 229 0 SHEET 2 AA3 2 TYR A 235 LEU A 237 -1 O GLU A 236 N THR A 228 SHEET 1 AA4 8 ILE A 384 GLU A 387 0 SHEET 2 AA4 8 CYS A 565 GLY A 569 -1 O LEU A 566 N GLU A 387 SHEET 3 AA4 8 VAL A 559 VAL A 562 -1 N LEU A 560 O VAL A 567 SHEET 4 AA4 8 LEU A 406 ALA A 409 1 N GLY A 407 O VAL A 561 SHEET 5 AA4 8 ARG A 423 ASP A 428 -1 O SER A 424 N TRP A 408 SHEET 6 AA4 8 VAL A 528 SER A 533 -1 O THR A 532 N ILE A 425 SHEET 7 AA4 8 PRO A 453 THR A 456 -1 N VAL A 454 O LEU A 529 SHEET 8 AA4 8 GLN A 503 VAL A 505 1 O GLN A 503 N VAL A 455 SHEET 1 AA5 2 VAL A 479 PRO A 481 0 SHEET 2 AA5 2 THR A 499 ARG A 501 -1 O ALA A 500 N VAL A 480 SHEET 1 AA6 2 LEU A 578 PHE A 582 0 SHEET 2 AA6 2 LEU A 663 PRO A 667 -1 O ALA A 666 N VAL A 579 SHEET 1 AA7 6 SER A 616 LYS A 618 0 SHEET 2 AA7 6 THR A 604 LEU A 609 -1 N ILE A 607 O ALA A 617 SHEET 3 AA7 6 THR A 586 ARG A 592 -1 N VAL A 589 O GLU A 606 SHEET 4 AA7 6 THR B 586 ALA B 594 -1 O ARG B 592 N LEU A 588 SHEET 5 AA7 6 ALA B 600 LEU B 609 -1 O GLY B 601 N THR B 593 SHEET 6 AA7 6 SER B 616 VAL B 619 -1 O ALA B 617 N ILE B 607 SHEET 1 AA8 5 GLU B 38 GLU B 44 0 SHEET 2 AA8 5 ALA B 30 ARG B 35 -1 N LEU B 33 O ALA B 41 SHEET 3 AA8 5 LEU B 2 ASN B 7 -1 N GLY B 5 O SER B 32 SHEET 4 AA8 5 ALA B 78 TYR B 81 1 O GLY B 80 N LEU B 6 SHEET 5 AA8 5 LEU B 128 TYR B 130 1 O VAL B 129 N VAL B 79 SHEET 1 AA9 6 ARG B 173 PRO B 181 0 SHEET 2 AA9 6 HIS B 162 GLU B 170 -1 N VAL B 166 O LEU B 177 SHEET 3 AA9 6 SER B 149 LEU B 155 -1 N VAL B 152 O TYR B 167 SHEET 4 AA9 6 ARG B 299 GLY B 303 1 O ARG B 299 N LEU B 151 SHEET 5 AA9 6 GLU B 324 VAL B 327 1 O PHE B 326 N LEU B 300 SHEET 6 AA9 6 ASP B 470 GLY B 471 1 O ASP B 470 N VAL B 325 SHEET 1 AB1 2 TYR B 227 GLN B 230 0 SHEET 2 AB1 2 GLU B 234 LEU B 237 -1 O GLU B 234 N GLN B 230 SHEET 1 AB2 2 SER B 362 ALA B 366 0 SHEET 2 AB2 2 ARG B 412 GLU B 414 -1 O SER B 413 N GLY B 364 SHEET 1 AB3 8 ILE B 384 GLU B 387 0 SHEET 2 AB3 8 LEU B 566 GLY B 569 -1 O LEU B 566 N GLU B 387 SHEET 3 AB3 8 VAL B 559 VAL B 562 -1 N LEU B 560 O VAL B 567 SHEET 4 AB3 8 LEU B 406 ALA B 409 1 N GLY B 407 O VAL B 561 SHEET 5 AB3 8 ARG B 423 ASP B 428 -1 O VAL B 426 N LEU B 406 SHEET 6 AB3 8 VAL B 528 SER B 533 -1 O LEU B 530 N ALA B 427 SHEET 7 AB3 8 ALA B 452 THR B 456 -1 N ALA B 452 O ASN B 531 SHEET 8 AB3 8 GLN B 503 VAL B 505 1 O GLN B 503 N VAL B 455 SHEET 1 AB4 2 VAL B 479 PRO B 481 0 SHEET 2 AB4 2 THR B 499 ARG B 501 -1 O ALA B 500 N VAL B 480 SHEET 1 AB5 2 VAL B 579 PHE B 582 0 SHEET 2 AB5 2 LEU B 663 ALA B 666 -1 O ALA B 666 N VAL B 579 LINK NE2 HIS A 133 FE FE A 701 1555 1555 2.31 LINK NE2 HIS A 137 FE FE A 701 1555 1555 2.36 LINK OD2 ASP A 156 FE FE A 701 1555 1555 2.35 LINK OD1 ASP A 333 FE FE A 701 1555 1555 2.38 LINK FE FE A 701 O3P AMP A 715 1555 1555 2.42 LINK NE2 HIS B 133 FE FE B 702 1555 1555 2.32 LINK NE2 HIS B 137 FE FE B 702 1555 1555 2.37 LINK OD2 ASP B 156 FE FE B 702 1555 1555 2.35 LINK OD1 ASP B 333 FE FE B 702 1555 1555 2.27 LINK N50 8CW B 701 FE FE B 702 1555 1555 2.75 LINK O52 8CW B 701 FE FE B 702 1555 1555 2.35 CRYST1 111.029 111.029 231.276 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009007 0.005200 0.000000 0.00000 SCALE2 0.000000 0.010400 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004324 0.00000