data_7VZF # _entry.id 7VZF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7VZF pdb_00007vzf 10.2210/pdb7vzf/pdb WWPDB D_1300025698 ? ? EMDB EMD-32227 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-29 2 'Structure model' 1 1 2024-06-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' em_admin 4 2 'Structure model' pdbx_contact_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_em_admin.last_update' 2 2 'Structure model' '_pdbx_contact_author.address_1' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7VZF _pdbx_database_status.recvd_initial_deposition_date 2021-11-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of amyloid fibril formed by full-length human SOD1' _pdbx_database_related.db_id EMD-32227 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 liangyi@whu.edu.cn Yi Liang ? 'principal investigator/group leader' 0000-0002-7349-8300 4 liulab@sioc.ac.cn Cong Liu ? 'principal investigator/group leader' 0000-0003-3425-6672 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, L.Q.' 1 ? 'Ma, Y.Y.' 2 ? 'Yuan, H.Y.' 3 ? 'Zhao, K.' 4 ? 'Zhang, M.Y.' 5 ? 'Wang, Q.' 6 ? 'Huang, X.' 7 ? 'Xu, W.C.' 8 ? 'Chen, J.' 9 ? 'Li, D.' 10 ? 'Zhang, D.L.' 11 ? 'Zou, L.Y.' 12 ? 'Yin, P.' 13 ? 'Liu, C.' 14 ? 'Liang, Y.' 15 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 3491 _citation.page_last 3491 _citation.title 'Cryo-EM structure of an amyloid fibril formed by full-length human SOD1 reveals its conformational conversion.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-31240-4 _citation.pdbx_database_id_PubMed 35715417 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, L.Q.' 1 0000-0002-5377-3168 primary 'Ma, Y.' 2 0000-0002-7498-110X primary 'Yuan, H.Y.' 3 0000-0003-1658-5130 primary 'Zhao, K.' 4 0000-0002-6524-8715 primary 'Zhang, M.Y.' 5 0000-0002-4901-3860 primary 'Wang, Q.' 6 0000-0002-7048-638X primary 'Huang, X.' 7 0000-0001-6321-3124 primary 'Xu, W.C.' 8 ? primary 'Dai, B.' 9 ? primary 'Chen, J.' 10 ? primary 'Li, D.' 11 0000-0002-1609-1539 primary 'Zhang, D.' 12 0000-0002-5299-0718 primary 'Wang, Z.' 13 0000-0001-5699-8330 primary 'Zou, L.' 14 0000-0001-8066-8892 primary 'Yin, P.' 15 0000-0001-8001-221X primary 'Liu, C.' 16 0000-0003-3425-6672 primary 'Liang, Y.' 17 0000-0002-7349-8300 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Superoxide dismutase [Cu-Zn]' _entity.formula_weight 15958.757 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec 1.15.1.1 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Superoxide dismutase 1,hSod1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEER HVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEER HVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 LYS n 1 5 ALA n 1 6 VAL n 1 7 CYS n 1 8 VAL n 1 9 LEU n 1 10 LYS n 1 11 GLY n 1 12 ASP n 1 13 GLY n 1 14 PRO n 1 15 VAL n 1 16 GLN n 1 17 GLY n 1 18 ILE n 1 19 ILE n 1 20 ASN n 1 21 PHE n 1 22 GLU n 1 23 GLN n 1 24 LYS n 1 25 GLU n 1 26 SER n 1 27 ASN n 1 28 GLY n 1 29 PRO n 1 30 VAL n 1 31 LYS n 1 32 VAL n 1 33 TRP n 1 34 GLY n 1 35 SER n 1 36 ILE n 1 37 LYS n 1 38 GLY n 1 39 LEU n 1 40 THR n 1 41 GLU n 1 42 GLY n 1 43 LEU n 1 44 HIS n 1 45 GLY n 1 46 PHE n 1 47 HIS n 1 48 VAL n 1 49 HIS n 1 50 GLU n 1 51 PHE n 1 52 GLY n 1 53 ASP n 1 54 ASN n 1 55 THR n 1 56 ALA n 1 57 GLY n 1 58 CYS n 1 59 THR n 1 60 SER n 1 61 ALA n 1 62 GLY n 1 63 PRO n 1 64 HIS n 1 65 PHE n 1 66 ASN n 1 67 PRO n 1 68 LEU n 1 69 SER n 1 70 ARG n 1 71 LYS n 1 72 HIS n 1 73 GLY n 1 74 GLY n 1 75 PRO n 1 76 LYS n 1 77 ASP n 1 78 GLU n 1 79 GLU n 1 80 ARG n 1 81 HIS n 1 82 VAL n 1 83 GLY n 1 84 ASP n 1 85 LEU n 1 86 GLY n 1 87 ASN n 1 88 VAL n 1 89 THR n 1 90 ALA n 1 91 ASP n 1 92 LYS n 1 93 ASP n 1 94 GLY n 1 95 VAL n 1 96 ALA n 1 97 ASP n 1 98 VAL n 1 99 SER n 1 100 ILE n 1 101 GLU n 1 102 ASP n 1 103 SER n 1 104 VAL n 1 105 ILE n 1 106 SER n 1 107 LEU n 1 108 SER n 1 109 GLY n 1 110 ASP n 1 111 HIS n 1 112 CYS n 1 113 ILE n 1 114 ILE n 1 115 GLY n 1 116 ARG n 1 117 THR n 1 118 LEU n 1 119 VAL n 1 120 VAL n 1 121 HIS n 1 122 GLU n 1 123 LYS n 1 124 ALA n 1 125 ASP n 1 126 ASP n 1 127 LEU n 1 128 GLY n 1 129 LYS n 1 130 GLY n 1 131 GLY n 1 132 ASN n 1 133 GLU n 1 134 GLU n 1 135 SER n 1 136 THR n 1 137 LYS n 1 138 THR n 1 139 GLY n 1 140 ASN n 1 141 ALA n 1 142 GLY n 1 143 SER n 1 144 ARG n 1 145 LEU n 1 146 ALA n 1 147 CYS n 1 148 GLY n 1 149 VAL n 1 150 ILE n 1 151 GLY n 1 152 ILE n 1 153 ALA n 1 154 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 154 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SOD1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 ALA 2 1 ? ? ? A . n A 1 3 THR 3 2 ? ? ? A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 VAL 6 5 5 VAL VAL A . n A 1 7 CYS 7 6 6 CYS CYS A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 PRO 14 13 13 PRO PRO A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 ILE 18 17 17 ILE ILE A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 ASN 20 19 19 ASN ASN A . n A 1 21 PHE 21 20 20 PHE PHE A . n A 1 22 GLU 22 21 21 GLU GLU A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 LYS 24 23 23 LYS LYS A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 LYS 31 30 30 LYS LYS A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 TRP 33 32 32 TRP TRP A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 THR 40 39 39 THR THR A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 HIS 44 43 43 HIS HIS A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 PHE 46 45 45 PHE PHE A . n A 1 47 HIS 47 46 46 HIS HIS A . n A 1 48 VAL 48 47 47 VAL VAL A . n A 1 49 HIS 49 48 48 HIS HIS A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 PHE 51 50 50 PHE PHE A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 ASP 53 52 52 ASP ASP A . n A 1 54 ASN 54 53 53 ASN ASN A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 GLY 57 56 ? ? ? A . n A 1 58 CYS 58 57 ? ? ? A . n A 1 59 THR 59 58 ? ? ? A . n A 1 60 SER 60 59 ? ? ? A . n A 1 61 ALA 61 60 ? ? ? A . n A 1 62 GLY 62 61 ? ? ? A . n A 1 63 PRO 63 62 ? ? ? A . n A 1 64 HIS 64 63 ? ? ? A . n A 1 65 PHE 65 64 ? ? ? A . n A 1 66 ASN 66 65 ? ? ? A . n A 1 67 PRO 67 66 ? ? ? A . n A 1 68 LEU 68 67 ? ? ? A . n A 1 69 SER 69 68 ? ? ? A . n A 1 70 ARG 70 69 ? ? ? A . n A 1 71 LYS 71 70 ? ? ? A . n A 1 72 HIS 72 71 ? ? ? A . n A 1 73 GLY 73 72 ? ? ? A . n A 1 74 GLY 74 73 ? ? ? A . n A 1 75 PRO 75 74 ? ? ? A . n A 1 76 LYS 76 75 ? ? ? A . n A 1 77 ASP 77 76 ? ? ? A . n A 1 78 GLU 78 77 ? ? ? A . n A 1 79 GLU 79 78 ? ? ? A . n A 1 80 ARG 80 79 ? ? ? A . n A 1 81 HIS 81 80 ? ? ? A . n A 1 82 VAL 82 81 ? ? ? A . n A 1 83 GLY 83 82 ? ? ? A . n A 1 84 ASP 84 83 ? ? ? A . n A 1 85 LEU 85 84 ? ? ? A . n A 1 86 GLY 86 85 ? ? ? A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 VAL 88 87 87 VAL VAL A . n A 1 89 THR 89 88 88 THR THR A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 VAL 98 97 97 VAL VAL A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 GLU 101 100 100 GLU GLU A . n A 1 102 ASP 102 101 101 ASP ASP A . n A 1 103 SER 103 102 102 SER SER A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 SER 108 107 107 SER SER A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 HIS 111 110 110 HIS HIS A . n A 1 112 CYS 112 111 111 CYS CYS A . n A 1 113 ILE 113 112 112 ILE ILE A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 GLY 115 114 114 GLY GLY A . n A 1 116 ARG 116 115 115 ARG ARG A . n A 1 117 THR 117 116 116 THR THR A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 VAL 119 118 118 VAL VAL A . n A 1 120 VAL 120 119 119 VAL VAL A . n A 1 121 HIS 121 120 120 HIS HIS A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 ASP 126 125 125 ASP ASP A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 GLY 128 127 127 GLY GLY A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 GLY 130 129 129 GLY GLY A . n A 1 131 GLY 131 130 130 GLY GLY A . n A 1 132 ASN 132 131 131 ASN ASN A . n A 1 133 GLU 133 132 132 GLU GLU A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 SER 135 134 134 SER SER A . n A 1 136 THR 136 135 135 THR THR A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 ASN 140 139 139 ASN ASN A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 GLY 142 141 141 GLY GLY A . n A 1 143 SER 143 142 142 SER SER A . n A 1 144 ARG 144 143 143 ARG ARG A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 CYS 147 146 146 CYS CYS A . n A 1 148 GLY 148 147 147 GLY GLY A . n A 1 149 VAL 149 148 148 VAL VAL A . n A 1 150 ILE 150 149 149 ILE ILE A . n A 1 151 GLY 151 150 150 GLY GLY A . n A 1 152 ILE 152 151 151 ILE ILE A . n A 1 153 ALA 153 152 152 ALA ALA A . n A 1 154 GLN 154 153 153 GLN GLN A . n B 1 1 MET 1 0 ? ? ? B . n B 1 2 ALA 2 1 ? ? ? B . n B 1 3 THR 3 2 ? ? ? B . n B 1 4 LYS 4 3 3 LYS LYS B . n B 1 5 ALA 5 4 4 ALA ALA B . n B 1 6 VAL 6 5 5 VAL VAL B . n B 1 7 CYS 7 6 6 CYS CYS B . n B 1 8 VAL 8 7 7 VAL VAL B . n B 1 9 LEU 9 8 8 LEU LEU B . n B 1 10 LYS 10 9 9 LYS LYS B . n B 1 11 GLY 11 10 10 GLY GLY B . n B 1 12 ASP 12 11 11 ASP ASP B . n B 1 13 GLY 13 12 12 GLY GLY B . n B 1 14 PRO 14 13 13 PRO PRO B . n B 1 15 VAL 15 14 14 VAL VAL B . n B 1 16 GLN 16 15 15 GLN GLN B . n B 1 17 GLY 17 16 16 GLY GLY B . n B 1 18 ILE 18 17 17 ILE ILE B . n B 1 19 ILE 19 18 18 ILE ILE B . n B 1 20 ASN 20 19 19 ASN ASN B . n B 1 21 PHE 21 20 20 PHE PHE B . n B 1 22 GLU 22 21 21 GLU GLU B . n B 1 23 GLN 23 22 22 GLN GLN B . n B 1 24 LYS 24 23 23 LYS LYS B . n B 1 25 GLU 25 24 24 GLU GLU B . n B 1 26 SER 26 25 25 SER SER B . n B 1 27 ASN 27 26 26 ASN ASN B . n B 1 28 GLY 28 27 27 GLY GLY B . n B 1 29 PRO 29 28 28 PRO PRO B . n B 1 30 VAL 30 29 29 VAL VAL B . n B 1 31 LYS 31 30 30 LYS LYS B . n B 1 32 VAL 32 31 31 VAL VAL B . n B 1 33 TRP 33 32 32 TRP TRP B . n B 1 34 GLY 34 33 33 GLY GLY B . n B 1 35 SER 35 34 34 SER SER B . n B 1 36 ILE 36 35 35 ILE ILE B . n B 1 37 LYS 37 36 36 LYS LYS B . n B 1 38 GLY 38 37 37 GLY GLY B . n B 1 39 LEU 39 38 38 LEU LEU B . n B 1 40 THR 40 39 39 THR THR B . n B 1 41 GLU 41 40 40 GLU GLU B . n B 1 42 GLY 42 41 41 GLY GLY B . n B 1 43 LEU 43 42 42 LEU LEU B . n B 1 44 HIS 44 43 43 HIS HIS B . n B 1 45 GLY 45 44 44 GLY GLY B . n B 1 46 PHE 46 45 45 PHE PHE B . n B 1 47 HIS 47 46 46 HIS HIS B . n B 1 48 VAL 48 47 47 VAL VAL B . n B 1 49 HIS 49 48 48 HIS HIS B . n B 1 50 GLU 50 49 49 GLU GLU B . n B 1 51 PHE 51 50 50 PHE PHE B . n B 1 52 GLY 52 51 51 GLY GLY B . n B 1 53 ASP 53 52 52 ASP ASP B . n B 1 54 ASN 54 53 53 ASN ASN B . n B 1 55 THR 55 54 54 THR THR B . n B 1 56 ALA 56 55 55 ALA ALA B . n B 1 57 GLY 57 56 ? ? ? B . n B 1 58 CYS 58 57 ? ? ? B . n B 1 59 THR 59 58 ? ? ? B . n B 1 60 SER 60 59 ? ? ? B . n B 1 61 ALA 61 60 ? ? ? B . n B 1 62 GLY 62 61 ? ? ? B . n B 1 63 PRO 63 62 ? ? ? B . n B 1 64 HIS 64 63 ? ? ? B . n B 1 65 PHE 65 64 ? ? ? B . n B 1 66 ASN 66 65 ? ? ? B . n B 1 67 PRO 67 66 ? ? ? B . n B 1 68 LEU 68 67 ? ? ? B . n B 1 69 SER 69 68 ? ? ? B . n B 1 70 ARG 70 69 ? ? ? B . n B 1 71 LYS 71 70 ? ? ? B . n B 1 72 HIS 72 71 ? ? ? B . n B 1 73 GLY 73 72 ? ? ? B . n B 1 74 GLY 74 73 ? ? ? B . n B 1 75 PRO 75 74 ? ? ? B . n B 1 76 LYS 76 75 ? ? ? B . n B 1 77 ASP 77 76 ? ? ? B . n B 1 78 GLU 78 77 ? ? ? B . n B 1 79 GLU 79 78 ? ? ? B . n B 1 80 ARG 80 79 ? ? ? B . n B 1 81 HIS 81 80 ? ? ? B . n B 1 82 VAL 82 81 ? ? ? B . n B 1 83 GLY 83 82 ? ? ? B . n B 1 84 ASP 84 83 ? ? ? B . n B 1 85 LEU 85 84 ? ? ? B . n B 1 86 GLY 86 85 ? ? ? B . n B 1 87 ASN 87 86 86 ASN ASN B . n B 1 88 VAL 88 87 87 VAL VAL B . n B 1 89 THR 89 88 88 THR THR B . n B 1 90 ALA 90 89 89 ALA ALA B . n B 1 91 ASP 91 90 90 ASP ASP B . n B 1 92 LYS 92 91 91 LYS LYS B . n B 1 93 ASP 93 92 92 ASP ASP B . n B 1 94 GLY 94 93 93 GLY GLY B . n B 1 95 VAL 95 94 94 VAL VAL B . n B 1 96 ALA 96 95 95 ALA ALA B . n B 1 97 ASP 97 96 96 ASP ASP B . n B 1 98 VAL 98 97 97 VAL VAL B . n B 1 99 SER 99 98 98 SER SER B . n B 1 100 ILE 100 99 99 ILE ILE B . n B 1 101 GLU 101 100 100 GLU GLU B . n B 1 102 ASP 102 101 101 ASP ASP B . n B 1 103 SER 103 102 102 SER SER B . n B 1 104 VAL 104 103 103 VAL VAL B . n B 1 105 ILE 105 104 104 ILE ILE B . n B 1 106 SER 106 105 105 SER SER B . n B 1 107 LEU 107 106 106 LEU LEU B . n B 1 108 SER 108 107 107 SER SER B . n B 1 109 GLY 109 108 108 GLY GLY B . n B 1 110 ASP 110 109 109 ASP ASP B . n B 1 111 HIS 111 110 110 HIS HIS B . n B 1 112 CYS 112 111 111 CYS CYS B . n B 1 113 ILE 113 112 112 ILE ILE B . n B 1 114 ILE 114 113 113 ILE ILE B . n B 1 115 GLY 115 114 114 GLY GLY B . n B 1 116 ARG 116 115 115 ARG ARG B . n B 1 117 THR 117 116 116 THR THR B . n B 1 118 LEU 118 117 117 LEU LEU B . n B 1 119 VAL 119 118 118 VAL VAL B . n B 1 120 VAL 120 119 119 VAL VAL B . n B 1 121 HIS 121 120 120 HIS HIS B . n B 1 122 GLU 122 121 121 GLU GLU B . n B 1 123 LYS 123 122 122 LYS LYS B . n B 1 124 ALA 124 123 123 ALA ALA B . n B 1 125 ASP 125 124 124 ASP ASP B . n B 1 126 ASP 126 125 125 ASP ASP B . n B 1 127 LEU 127 126 126 LEU LEU B . n B 1 128 GLY 128 127 127 GLY GLY B . n B 1 129 LYS 129 128 128 LYS LYS B . n B 1 130 GLY 130 129 129 GLY GLY B . n B 1 131 GLY 131 130 130 GLY GLY B . n B 1 132 ASN 132 131 131 ASN ASN B . n B 1 133 GLU 133 132 132 GLU GLU B . n B 1 134 GLU 134 133 133 GLU GLU B . n B 1 135 SER 135 134 134 SER SER B . n B 1 136 THR 136 135 135 THR THR B . n B 1 137 LYS 137 136 136 LYS LYS B . n B 1 138 THR 138 137 137 THR THR B . n B 1 139 GLY 139 138 138 GLY GLY B . n B 1 140 ASN 140 139 139 ASN ASN B . n B 1 141 ALA 141 140 140 ALA ALA B . n B 1 142 GLY 142 141 141 GLY GLY B . n B 1 143 SER 143 142 142 SER SER B . n B 1 144 ARG 144 143 143 ARG ARG B . n B 1 145 LEU 145 144 144 LEU LEU B . n B 1 146 ALA 146 145 145 ALA ALA B . n B 1 147 CYS 147 146 146 CYS CYS B . n B 1 148 GLY 148 147 147 GLY GLY B . n B 1 149 VAL 149 148 148 VAL VAL B . n B 1 150 ILE 150 149 149 ILE ILE B . n B 1 151 GLY 151 150 150 GLY GLY B . n B 1 152 ILE 152 151 151 ILE ILE B . n B 1 153 ALA 153 152 152 ALA ALA B . n B 1 154 GLN 154 153 153 GLN GLN B . n C 1 1 MET 1 0 ? ? ? C . n C 1 2 ALA 2 1 ? ? ? C . n C 1 3 THR 3 2 ? ? ? C . n C 1 4 LYS 4 3 3 LYS LYS C . n C 1 5 ALA 5 4 4 ALA ALA C . n C 1 6 VAL 6 5 5 VAL VAL C . n C 1 7 CYS 7 6 6 CYS CYS C . n C 1 8 VAL 8 7 7 VAL VAL C . n C 1 9 LEU 9 8 8 LEU LEU C . n C 1 10 LYS 10 9 9 LYS LYS C . n C 1 11 GLY 11 10 10 GLY GLY C . n C 1 12 ASP 12 11 11 ASP ASP C . n C 1 13 GLY 13 12 12 GLY GLY C . n C 1 14 PRO 14 13 13 PRO PRO C . n C 1 15 VAL 15 14 14 VAL VAL C . n C 1 16 GLN 16 15 15 GLN GLN C . n C 1 17 GLY 17 16 16 GLY GLY C . n C 1 18 ILE 18 17 17 ILE ILE C . n C 1 19 ILE 19 18 18 ILE ILE C . n C 1 20 ASN 20 19 19 ASN ASN C . n C 1 21 PHE 21 20 20 PHE PHE C . n C 1 22 GLU 22 21 21 GLU GLU C . n C 1 23 GLN 23 22 22 GLN GLN C . n C 1 24 LYS 24 23 23 LYS LYS C . n C 1 25 GLU 25 24 24 GLU GLU C . n C 1 26 SER 26 25 25 SER SER C . n C 1 27 ASN 27 26 26 ASN ASN C . n C 1 28 GLY 28 27 27 GLY GLY C . n C 1 29 PRO 29 28 28 PRO PRO C . n C 1 30 VAL 30 29 29 VAL VAL C . n C 1 31 LYS 31 30 30 LYS LYS C . n C 1 32 VAL 32 31 31 VAL VAL C . n C 1 33 TRP 33 32 32 TRP TRP C . n C 1 34 GLY 34 33 33 GLY GLY C . n C 1 35 SER 35 34 34 SER SER C . n C 1 36 ILE 36 35 35 ILE ILE C . n C 1 37 LYS 37 36 36 LYS LYS C . n C 1 38 GLY 38 37 37 GLY GLY C . n C 1 39 LEU 39 38 38 LEU LEU C . n C 1 40 THR 40 39 39 THR THR C . n C 1 41 GLU 41 40 40 GLU GLU C . n C 1 42 GLY 42 41 41 GLY GLY C . n C 1 43 LEU 43 42 42 LEU LEU C . n C 1 44 HIS 44 43 43 HIS HIS C . n C 1 45 GLY 45 44 44 GLY GLY C . n C 1 46 PHE 46 45 45 PHE PHE C . n C 1 47 HIS 47 46 46 HIS HIS C . n C 1 48 VAL 48 47 47 VAL VAL C . n C 1 49 HIS 49 48 48 HIS HIS C . n C 1 50 GLU 50 49 49 GLU GLU C . n C 1 51 PHE 51 50 50 PHE PHE C . n C 1 52 GLY 52 51 51 GLY GLY C . n C 1 53 ASP 53 52 52 ASP ASP C . n C 1 54 ASN 54 53 53 ASN ASN C . n C 1 55 THR 55 54 54 THR THR C . n C 1 56 ALA 56 55 55 ALA ALA C . n C 1 57 GLY 57 56 ? ? ? C . n C 1 58 CYS 58 57 ? ? ? C . n C 1 59 THR 59 58 ? ? ? C . n C 1 60 SER 60 59 ? ? ? C . n C 1 61 ALA 61 60 ? ? ? C . n C 1 62 GLY 62 61 ? ? ? C . n C 1 63 PRO 63 62 ? ? ? C . n C 1 64 HIS 64 63 ? ? ? C . n C 1 65 PHE 65 64 ? ? ? C . n C 1 66 ASN 66 65 ? ? ? C . n C 1 67 PRO 67 66 ? ? ? C . n C 1 68 LEU 68 67 ? ? ? C . n C 1 69 SER 69 68 ? ? ? C . n C 1 70 ARG 70 69 ? ? ? C . n C 1 71 LYS 71 70 ? ? ? C . n C 1 72 HIS 72 71 ? ? ? C . n C 1 73 GLY 73 72 ? ? ? C . n C 1 74 GLY 74 73 ? ? ? C . n C 1 75 PRO 75 74 ? ? ? C . n C 1 76 LYS 76 75 ? ? ? C . n C 1 77 ASP 77 76 ? ? ? C . n C 1 78 GLU 78 77 ? ? ? C . n C 1 79 GLU 79 78 ? ? ? C . n C 1 80 ARG 80 79 ? ? ? C . n C 1 81 HIS 81 80 ? ? ? C . n C 1 82 VAL 82 81 ? ? ? C . n C 1 83 GLY 83 82 ? ? ? C . n C 1 84 ASP 84 83 ? ? ? C . n C 1 85 LEU 85 84 ? ? ? C . n C 1 86 GLY 86 85 ? ? ? C . n C 1 87 ASN 87 86 86 ASN ASN C . n C 1 88 VAL 88 87 87 VAL VAL C . n C 1 89 THR 89 88 88 THR THR C . n C 1 90 ALA 90 89 89 ALA ALA C . n C 1 91 ASP 91 90 90 ASP ASP C . n C 1 92 LYS 92 91 91 LYS LYS C . n C 1 93 ASP 93 92 92 ASP ASP C . n C 1 94 GLY 94 93 93 GLY GLY C . n C 1 95 VAL 95 94 94 VAL VAL C . n C 1 96 ALA 96 95 95 ALA ALA C . n C 1 97 ASP 97 96 96 ASP ASP C . n C 1 98 VAL 98 97 97 VAL VAL C . n C 1 99 SER 99 98 98 SER SER C . n C 1 100 ILE 100 99 99 ILE ILE C . n C 1 101 GLU 101 100 100 GLU GLU C . n C 1 102 ASP 102 101 101 ASP ASP C . n C 1 103 SER 103 102 102 SER SER C . n C 1 104 VAL 104 103 103 VAL VAL C . n C 1 105 ILE 105 104 104 ILE ILE C . n C 1 106 SER 106 105 105 SER SER C . n C 1 107 LEU 107 106 106 LEU LEU C . n C 1 108 SER 108 107 107 SER SER C . n C 1 109 GLY 109 108 108 GLY GLY C . n C 1 110 ASP 110 109 109 ASP ASP C . n C 1 111 HIS 111 110 110 HIS HIS C . n C 1 112 CYS 112 111 111 CYS CYS C . n C 1 113 ILE 113 112 112 ILE ILE C . n C 1 114 ILE 114 113 113 ILE ILE C . n C 1 115 GLY 115 114 114 GLY GLY C . n C 1 116 ARG 116 115 115 ARG ARG C . n C 1 117 THR 117 116 116 THR THR C . n C 1 118 LEU 118 117 117 LEU LEU C . n C 1 119 VAL 119 118 118 VAL VAL C . n C 1 120 VAL 120 119 119 VAL VAL C . n C 1 121 HIS 121 120 120 HIS HIS C . n C 1 122 GLU 122 121 121 GLU GLU C . n C 1 123 LYS 123 122 122 LYS LYS C . n C 1 124 ALA 124 123 123 ALA ALA C . n C 1 125 ASP 125 124 124 ASP ASP C . n C 1 126 ASP 126 125 125 ASP ASP C . n C 1 127 LEU 127 126 126 LEU LEU C . n C 1 128 GLY 128 127 127 GLY GLY C . n C 1 129 LYS 129 128 128 LYS LYS C . n C 1 130 GLY 130 129 129 GLY GLY C . n C 1 131 GLY 131 130 130 GLY GLY C . n C 1 132 ASN 132 131 131 ASN ASN C . n C 1 133 GLU 133 132 132 GLU GLU C . n C 1 134 GLU 134 133 133 GLU GLU C . n C 1 135 SER 135 134 134 SER SER C . n C 1 136 THR 136 135 135 THR THR C . n C 1 137 LYS 137 136 136 LYS LYS C . n C 1 138 THR 138 137 137 THR THR C . n C 1 139 GLY 139 138 138 GLY GLY C . n C 1 140 ASN 140 139 139 ASN ASN C . n C 1 141 ALA 141 140 140 ALA ALA C . n C 1 142 GLY 142 141 141 GLY GLY C . n C 1 143 SER 143 142 142 SER SER C . n C 1 144 ARG 144 143 143 ARG ARG C . n C 1 145 LEU 145 144 144 LEU LEU C . n C 1 146 ALA 146 145 145 ALA ALA C . n C 1 147 CYS 147 146 146 CYS CYS C . n C 1 148 GLY 148 147 147 GLY GLY C . n C 1 149 VAL 149 148 148 VAL VAL C . n C 1 150 ILE 150 149 149 ILE ILE C . n C 1 151 GLY 151 150 150 GLY GLY C . n C 1 152 ILE 152 151 151 ILE ILE C . n C 1 153 ALA 153 152 152 ALA ALA C . n C 1 154 GLN 154 153 153 GLN GLN C . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7VZF _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7VZF _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7VZF _struct.title 'Cryo-EM structure of amyloid fibril formed by full-length human SOD1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7VZF _struct_keywords.text 'Amyloid fibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SODC_HUMAN _struct_ref.pdbx_db_accession P00441 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEER HVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7VZF A 1 ? 154 ? P00441 1 ? 154 ? 0 153 2 1 7VZF B 1 ? 154 ? P00441 1 ? 154 ? 0 153 3 1 7VZF C 1 ? 154 ? P00441 1 ? 154 ? 0 153 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 3 ? AA6 ? 3 ? AA7 ? 3 ? AA8 ? 3 ? AA9 ? 3 ? AB1 ? 3 ? AB2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA7 1 2 ? parallel AA7 2 3 ? parallel AA8 1 2 ? parallel AA8 2 3 ? parallel AA9 1 2 ? parallel AA9 2 3 ? parallel AB1 1 2 ? parallel AB1 2 3 ? parallel AB2 1 2 ? parallel AB2 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 7 ? LEU A 9 ? CYS A 6 LEU A 8 AA1 2 CYS B 7 ? LEU B 9 ? CYS B 6 LEU B 8 AA1 3 CYS C 7 ? LEU C 9 ? CYS C 6 LEU C 8 AA2 1 ILE A 18 ? ILE A 19 ? ILE A 17 ILE A 18 AA2 2 ILE B 18 ? ILE B 19 ? ILE B 17 ILE B 18 AA2 3 ILE C 18 ? ILE C 19 ? ILE C 17 ILE C 18 AA3 1 LYS A 24 ? SER A 26 ? LYS A 23 SER A 25 AA3 2 LYS B 24 ? SER B 26 ? LYS B 23 SER B 25 AA3 3 LYS C 24 ? SER C 26 ? LYS C 23 SER C 25 AA4 1 TRP A 33 ? GLY A 42 ? TRP A 32 GLY A 41 AA4 2 TRP B 33 ? GLY B 42 ? TRP B 32 GLY B 41 AA4 3 TRP C 33 ? GLY C 42 ? TRP C 32 GLY C 41 AA5 1 ASP A 53 ? ASN A 54 ? ASP A 52 ASN A 53 AA5 2 ASP B 53 ? ASN B 54 ? ASP B 52 ASN B 53 AA5 3 ASP C 53 ? ASN C 54 ? ASP C 52 ASN C 53 AA6 1 VAL A 88 ? ALA A 90 ? VAL A 87 ALA A 89 AA6 2 VAL B 88 ? ALA B 90 ? VAL B 87 ALA B 89 AA6 3 VAL C 88 ? ALA C 90 ? VAL C 87 ALA C 89 AA7 1 ALA A 96 ? VAL A 98 ? ALA A 95 VAL A 97 AA7 2 ALA B 96 ? VAL B 98 ? ALA B 95 VAL B 97 AA7 3 ALA C 96 ? VAL C 98 ? ALA C 95 VAL C 97 AA8 1 SER A 103 ? SER A 106 ? SER A 102 SER A 105 AA8 2 SER B 103 ? SER B 106 ? SER B 102 SER B 105 AA8 3 SER C 103 ? SER C 106 ? SER C 102 SER C 105 AA9 1 ILE A 113 ? ILE A 114 ? ILE A 112 ILE A 113 AA9 2 ILE B 113 ? ILE B 114 ? ILE B 112 ILE B 113 AA9 3 ILE C 113 ? ILE C 114 ? ILE C 112 ILE C 113 AB1 1 GLU A 133 ? GLU A 134 ? GLU A 132 GLU A 133 AB1 2 GLU B 133 ? GLU B 134 ? GLU B 132 GLU B 133 AB1 3 GLU C 133 ? GLU C 134 ? GLU C 132 GLU C 133 AB2 1 ALA A 146 ? ALA A 153 ? ALA A 145 ALA A 152 AB2 2 ALA B 146 ? ALA B 153 ? ALA B 145 ALA B 152 AB2 3 ALA C 146 ? ALA C 153 ? ALA C 145 ALA C 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 8 ? N VAL A 7 O LEU B 9 ? O LEU B 8 AA1 2 3 N VAL B 8 ? N VAL B 7 O LEU C 9 ? O LEU C 8 AA2 1 2 N ILE A 19 ? N ILE A 18 O ILE B 18 ? O ILE B 17 AA2 2 3 N ILE B 19 ? N ILE B 18 O ILE C 18 ? O ILE C 17 AA3 1 2 N GLU A 25 ? N GLU A 24 O LYS B 24 ? O LYS B 23 AA3 2 3 N GLU B 25 ? N GLU B 24 O LYS C 24 ? O LYS C 23 AA4 1 2 N LEU A 39 ? N LEU A 38 O GLY B 38 ? O GLY B 37 AA4 2 3 N LEU B 39 ? N LEU B 38 O GLY C 38 ? O GLY C 37 AA5 1 2 N ASN A 54 ? N ASN A 53 O ASP B 53 ? O ASP B 52 AA5 2 3 N ASN B 54 ? N ASN B 53 O ASP C 53 ? O ASP C 52 AA6 1 2 N THR A 89 ? N THR A 88 O VAL B 88 ? O VAL B 87 AA6 2 3 N THR B 89 ? N THR B 88 O VAL C 88 ? O VAL C 87 AA7 1 2 N ASP A 97 ? N ASP A 96 O ASP B 97 ? O ASP B 96 AA7 2 3 N ASP B 97 ? N ASP B 96 O ASP C 97 ? O ASP C 96 AA8 1 2 N ILE A 105 ? N ILE A 104 O SER B 106 ? O SER B 105 AA8 2 3 N ILE B 105 ? N ILE B 104 O SER C 106 ? O SER C 105 AA9 1 2 N ILE A 114 ? N ILE A 113 O ILE B 113 ? O ILE B 112 AA9 2 3 N ILE B 114 ? N ILE B 113 O ILE C 113 ? O ILE C 112 AB1 1 2 N GLU A 134 ? N GLU A 133 O GLU B 133 ? O GLU B 132 AB1 2 3 N GLU B 134 ? N GLU B 133 O GLU C 133 ? O GLU C 132 AB2 1 2 N GLY A 148 ? N GLY A 147 O VAL B 149 ? O VAL B 148 AB2 2 3 N GLY B 148 ? N GLY B 147 O VAL C 149 ? O VAL C 148 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 53 ? ? O C VAL 14 ? ? 1.97 2 1 OG1 A THR 137 ? ? O B THR 137 ? ? 2.13 3 1 OG1 B THR 137 ? ? O C THR 137 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 15 ? ? -145.97 -157.94 2 1 GLU A 21 ? ? -108.89 -65.04 3 1 ASN A 26 ? ? -78.42 -165.64 4 1 LYS A 30 ? ? 59.74 70.68 5 1 HIS A 43 ? ? -165.03 109.33 6 1 PHE A 45 ? ? -162.34 100.21 7 1 ASP A 90 ? ? -93.90 -63.13 8 1 ASP A 92 ? ? 62.85 -2.22 9 1 LEU A 106 ? ? -142.97 47.18 10 1 ASP A 124 ? ? 34.55 59.32 11 1 THR A 135 ? ? 35.32 58.11 12 1 ILE A 149 ? ? -120.68 -60.90 13 1 GLN B 15 ? ? -146.04 -157.99 14 1 GLU B 21 ? ? -108.94 -65.01 15 1 ASN B 26 ? ? -78.43 -165.69 16 1 LYS B 30 ? ? 59.75 70.69 17 1 HIS B 43 ? ? -165.00 109.37 18 1 PHE B 45 ? ? -162.36 100.25 19 1 ASP B 90 ? ? -93.88 -63.10 20 1 ASP B 92 ? ? 62.80 -2.17 21 1 LEU B 106 ? ? -143.00 47.20 22 1 ASP B 124 ? ? 34.57 59.36 23 1 THR B 135 ? ? 35.42 58.04 24 1 ILE B 149 ? ? -120.66 -60.97 25 1 GLN C 15 ? ? -146.05 -158.01 26 1 GLU C 21 ? ? -108.94 -65.02 27 1 ASN C 26 ? ? -78.46 -165.65 28 1 LYS C 30 ? ? 59.75 70.69 29 1 HIS C 43 ? ? -164.99 109.34 30 1 PHE C 45 ? ? -162.39 100.16 31 1 ASP C 90 ? ? -93.92 -63.19 32 1 ASP C 92 ? ? 62.77 -2.18 33 1 LEU C 106 ? ? -143.03 47.21 34 1 ASP C 124 ? ? 34.58 59.32 35 1 THR C 135 ? ? 35.43 58.04 36 1 ILE C 149 ? ? -120.65 -61.02 # _em_3d_fitting.entry_id 7VZF _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7VZF _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 70067 _em_3d_reconstruction.resolution 2.95 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Human SOD1 amyloid fibril' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7VZF _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2000 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7VZF _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7VZF _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A ALA 1 ? A ALA 2 3 1 Y 1 A THR 2 ? A THR 3 4 1 Y 1 A GLY 56 ? A GLY 57 5 1 Y 1 A CYS 57 ? A CYS 58 6 1 Y 1 A THR 58 ? A THR 59 7 1 Y 1 A SER 59 ? A SER 60 8 1 Y 1 A ALA 60 ? A ALA 61 9 1 Y 1 A GLY 61 ? A GLY 62 10 1 Y 1 A PRO 62 ? A PRO 63 11 1 Y 1 A HIS 63 ? A HIS 64 12 1 Y 1 A PHE 64 ? A PHE 65 13 1 Y 1 A ASN 65 ? A ASN 66 14 1 Y 1 A PRO 66 ? A PRO 67 15 1 Y 1 A LEU 67 ? A LEU 68 16 1 Y 1 A SER 68 ? A SER 69 17 1 Y 1 A ARG 69 ? A ARG 70 18 1 Y 1 A LYS 70 ? A LYS 71 19 1 Y 1 A HIS 71 ? A HIS 72 20 1 Y 1 A GLY 72 ? A GLY 73 21 1 Y 1 A GLY 73 ? A GLY 74 22 1 Y 1 A PRO 74 ? A PRO 75 23 1 Y 1 A LYS 75 ? A LYS 76 24 1 Y 1 A ASP 76 ? A ASP 77 25 1 Y 1 A GLU 77 ? A GLU 78 26 1 Y 1 A GLU 78 ? A GLU 79 27 1 Y 1 A ARG 79 ? A ARG 80 28 1 Y 1 A HIS 80 ? A HIS 81 29 1 Y 1 A VAL 81 ? A VAL 82 30 1 Y 1 A GLY 82 ? A GLY 83 31 1 Y 1 A ASP 83 ? A ASP 84 32 1 Y 1 A LEU 84 ? A LEU 85 33 1 Y 1 A GLY 85 ? A GLY 86 34 1 Y 1 B MET 0 ? B MET 1 35 1 Y 1 B ALA 1 ? B ALA 2 36 1 Y 1 B THR 2 ? B THR 3 37 1 Y 1 B GLY 56 ? B GLY 57 38 1 Y 1 B CYS 57 ? B CYS 58 39 1 Y 1 B THR 58 ? B THR 59 40 1 Y 1 B SER 59 ? B SER 60 41 1 Y 1 B ALA 60 ? B ALA 61 42 1 Y 1 B GLY 61 ? B GLY 62 43 1 Y 1 B PRO 62 ? B PRO 63 44 1 Y 1 B HIS 63 ? B HIS 64 45 1 Y 1 B PHE 64 ? B PHE 65 46 1 Y 1 B ASN 65 ? B ASN 66 47 1 Y 1 B PRO 66 ? B PRO 67 48 1 Y 1 B LEU 67 ? B LEU 68 49 1 Y 1 B SER 68 ? B SER 69 50 1 Y 1 B ARG 69 ? B ARG 70 51 1 Y 1 B LYS 70 ? B LYS 71 52 1 Y 1 B HIS 71 ? B HIS 72 53 1 Y 1 B GLY 72 ? B GLY 73 54 1 Y 1 B GLY 73 ? B GLY 74 55 1 Y 1 B PRO 74 ? B PRO 75 56 1 Y 1 B LYS 75 ? B LYS 76 57 1 Y 1 B ASP 76 ? B ASP 77 58 1 Y 1 B GLU 77 ? B GLU 78 59 1 Y 1 B GLU 78 ? B GLU 79 60 1 Y 1 B ARG 79 ? B ARG 80 61 1 Y 1 B HIS 80 ? B HIS 81 62 1 Y 1 B VAL 81 ? B VAL 82 63 1 Y 1 B GLY 82 ? B GLY 83 64 1 Y 1 B ASP 83 ? B ASP 84 65 1 Y 1 B LEU 84 ? B LEU 85 66 1 Y 1 B GLY 85 ? B GLY 86 67 1 Y 1 C MET 0 ? C MET 1 68 1 Y 1 C ALA 1 ? C ALA 2 69 1 Y 1 C THR 2 ? C THR 3 70 1 Y 1 C GLY 56 ? C GLY 57 71 1 Y 1 C CYS 57 ? C CYS 58 72 1 Y 1 C THR 58 ? C THR 59 73 1 Y 1 C SER 59 ? C SER 60 74 1 Y 1 C ALA 60 ? C ALA 61 75 1 Y 1 C GLY 61 ? C GLY 62 76 1 Y 1 C PRO 62 ? C PRO 63 77 1 Y 1 C HIS 63 ? C HIS 64 78 1 Y 1 C PHE 64 ? C PHE 65 79 1 Y 1 C ASN 65 ? C ASN 66 80 1 Y 1 C PRO 66 ? C PRO 67 81 1 Y 1 C LEU 67 ? C LEU 68 82 1 Y 1 C SER 68 ? C SER 69 83 1 Y 1 C ARG 69 ? C ARG 70 84 1 Y 1 C LYS 70 ? C LYS 71 85 1 Y 1 C HIS 71 ? C HIS 72 86 1 Y 1 C GLY 72 ? C GLY 73 87 1 Y 1 C GLY 73 ? C GLY 74 88 1 Y 1 C PRO 74 ? C PRO 75 89 1 Y 1 C LYS 75 ? C LYS 76 90 1 Y 1 C ASP 76 ? C ASP 77 91 1 Y 1 C GLU 77 ? C GLU 78 92 1 Y 1 C GLU 78 ? C GLU 79 93 1 Y 1 C ARG 79 ? C ARG 80 94 1 Y 1 C HIS 80 ? C HIS 81 95 1 Y 1 C VAL 81 ? C VAL 82 96 1 Y 1 C GLY 82 ? C GLY 83 97 1 Y 1 C ASP 83 ? C ASP 84 98 1 Y 1 C LEU 84 ? C LEU 85 99 1 Y 1 C GLY 85 ? C GLY 86 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 VAL N CA sing N N 332 VAL N H sing N N 333 VAL N H2 sing N N 334 VAL CA C sing N N 335 VAL CA CB sing N N 336 VAL CA HA sing N N 337 VAL C O doub N N 338 VAL C OXT sing N N 339 VAL CB CG1 sing N N 340 VAL CB CG2 sing N N 341 VAL CB HB sing N N 342 VAL CG1 HG11 sing N N 343 VAL CG1 HG12 sing N N 344 VAL CG1 HG13 sing N N 345 VAL CG2 HG21 sing N N 346 VAL CG2 HG22 sing N N 347 VAL CG2 HG23 sing N N 348 VAL OXT HXT sing N N 349 # _em_admin.entry_id 7VZF _em_admin.current_status REL _em_admin.deposition_date 2021-11-16 _em_admin.deposition_site PDBJ _em_admin.last_update 2024-06-26 _em_admin.map_release_date 2022-06-29 _em_admin.title 'Cryo-EM structure of amyloid fibril formed by full-length human SOD1' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -1.187 _em_helical_entity.axial_rise_per_subunit 4.82 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 31770833 1 'National Natural Science Foundation of China (NSFC)' China 32071212 2 'National Natural Science Foundation of China (NSFC)' China 31570779 3 # _atom_sites.entry_id 7VZF _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_