HEADER TRANSFERASE 19-NOV-21 7W15 TITLE CRYSTAL STRUCTURE OF MPH-E IN COMPLEX WITH GTP AND ERYTHROMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROLIDE 2'-PHOSPHOTRANSFERASE; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: MACROLIDE 2'-PHOSPHOTRANSFERASE,MPH(E)/MPH(G) FAMILY,MPH(E) COMPND 5 FAMILY MACROLIDE 2'-PHOSPHOTRANSFERASE,MPH(E) MACROLIDE 2'- COMPND 6 PHOSPHOTRANSFERASE,MPH2,PUTATIVE AMINOGLYCOSIDE PHOSPHOTRANSFERASE; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: MPH(E); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS ANTIBOTIC RESISTANCE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.QI,L.KUANG,Y.JIANG REVDAT 2 06-SEP-23 7W15 1 REMARK REVDAT 1 26-APR-23 7W15 0 JRNL AUTH Q.QI,L.KUANG,Y.JIANG JRNL TITL CRYSTAL STRUCTURE OF THE ACINETOBACTER BAUMANNII MACROLIDE JRNL TITL 2 PHOSPHOTRANSFERASES E REVEAL THE NOVEL CATALYSIS MECHANISM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 71722 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.790 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.8500 - 4.2700 0.99 5165 150 0.1640 0.1627 REMARK 3 2 4.2700 - 3.3900 1.00 5066 144 0.1617 0.1648 REMARK 3 3 3.3900 - 2.9600 1.00 5030 145 0.1817 0.1950 REMARK 3 4 2.9600 - 2.6900 1.00 5037 139 0.2032 0.2018 REMARK 3 5 2.6900 - 2.5000 1.00 4970 147 0.1989 0.2035 REMARK 3 6 2.5000 - 2.3500 1.00 5021 143 0.1998 0.2352 REMARK 3 7 2.3500 - 2.2300 1.00 4989 146 0.1991 0.2093 REMARK 3 8 2.2300 - 2.1400 1.00 4998 145 0.2004 0.2329 REMARK 3 9 2.1400 - 2.0500 0.99 4947 140 0.2015 0.2212 REMARK 3 10 2.0500 - 1.9800 0.99 4948 145 0.2034 0.2165 REMARK 3 11 1.9800 - 1.9200 0.99 4941 140 0.2144 0.2257 REMARK 3 12 1.9200 - 1.8700 0.99 4904 138 0.2157 0.2287 REMARK 3 13 1.8700 - 1.8200 0.98 4928 138 0.2183 0.2213 REMARK 3 14 1.8200 - 1.7700 0.96 4778 140 0.2246 0.2251 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.168 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 4994 REMARK 3 ANGLE : 1.355 6793 REMARK 3 CHIRALITY : 0.534 782 REMARK 3 PLANARITY : 0.010 831 REMARK 3 DIHEDRAL : 16.102 1841 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -1.9380 -13.3805 24.8057 REMARK 3 T TENSOR REMARK 3 T11: 0.1129 T22: 0.1222 REMARK 3 T33: 0.1019 T12: 0.0188 REMARK 3 T13: 0.0159 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.1232 L22: 0.3008 REMARK 3 L33: 0.2433 L12: -0.0927 REMARK 3 L13: 0.1038 L23: -0.0043 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: -0.0319 S13: -0.0072 REMARK 3 S21: 0.0460 S22: 0.0160 S23: 0.0316 REMARK 3 S31: -0.0250 S32: -0.0476 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 1 through 293 or REMARK 3 resid 301 through 302)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "B" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7W15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1300025768. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.973 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72216 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: O.O8 M MGGNESIUM ACETATE TETRAHYDRATE; REMARK 280 0.05 M SODIUM CACODYLATE PH6.5; 25% PEG3350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.13900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE B 294 REMARK 465 LEU B 295 REMARK 465 GLU B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 465 HIS B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 LEU A 295 REMARK 465 GLU A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 HIS A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 116 O HOH B 501 1.76 REMARK 500 O HOH A 683 O HOH A 719 1.94 REMARK 500 OE1 GLU A 258 O HOH A 501 1.98 REMARK 500 NH2 ARG A 150 O HOH A 502 1.99 REMARK 500 O HOH B 605 O HOH B 870 2.00 REMARK 500 O HOH A 633 O HOH A 732 2.00 REMARK 500 O HOH B 501 O HOH B 823 2.02 REMARK 500 O HOH A 588 O HOH A 724 2.03 REMARK 500 OE1 GLN B 4 O HOH B 502 2.03 REMARK 500 O HOH A 753 O HOH A 755 2.04 REMARK 500 O HOH B 773 O HOH B 867 2.05 REMARK 500 OE1 GLU A 236 O HOH A 503 2.05 REMARK 500 OE1 GLU B 246 O HOH B 503 2.05 REMARK 500 O HOH B 860 O HOH B 973 2.06 REMARK 500 O HOH B 654 O HOH B 799 2.07 REMARK 500 OD1 ASN A 254 O HOH A 504 2.07 REMARK 500 O HOH B 555 O HOH B 840 2.07 REMARK 500 O HOH A 670 O HOH A 784 2.08 REMARK 500 O HOH A 734 O HOH A 827 2.11 REMARK 500 O HOH A 501 O HOH A 515 2.12 REMARK 500 O HOH B 673 O HOH B 888 2.13 REMARK 500 OE1 GLU B 84 O HOH B 504 2.13 REMARK 500 O HOH A 744 O HOH A 747 2.13 REMARK 500 O HOH B 901 O HOH B 924 2.13 REMARK 500 O HOH B 819 O HOH B 835 2.14 REMARK 500 O HOH B 513 O HOH B 767 2.15 REMARK 500 O HOH A 657 O HOH A 735 2.16 REMARK 500 O HOH B 592 O HOH B 631 2.17 REMARK 500 O HOH A 572 O HOH A 770 2.18 REMARK 500 O HOH A 601 O HOH A 777 2.19 REMARK 500 OD1 ASP A 100 N THR A 103 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 168 O HOH B 658 2546 1.72 REMARK 500 OE2 GLU A 102 NH2 ARG A 137 1545 1.79 REMARK 500 OD1 ASP A 113 ND2 ASN A 254 2546 2.14 REMARK 500 O HOH B 774 O HOH B 914 2646 2.16 REMARK 500 O HOH B 834 O HOH A 762 2556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 81 44.31 -156.14 REMARK 500 ASP B 194 41.16 -145.43 REMARK 500 ILE B 212 -60.07 -107.58 REMARK 500 ASP B 220 -169.48 -166.95 REMARK 500 ASP A 194 41.31 -143.58 REMARK 500 ILE A 212 -63.05 -106.27 REMARK 500 ASP A 220 -169.21 -166.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 980 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 981 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B 982 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 983 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B 984 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH B 985 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 986 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 987 DISTANCE = 6.88 ANGSTROMS REMARK 525 HOH A 843 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 844 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 845 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH A 846 DISTANCE = 8.25 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 213 OD2 REMARK 620 2 GTP B 402 O1G 86.9 REMARK 620 3 GTP B 402 O3B 84.3 69.7 REMARK 620 4 GTP B 402 O2A 90.4 161.0 91.3 REMARK 620 5 HOH B 675 O 176.0 90.8 91.8 90.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 213 OD1 REMARK 620 2 ASP B 213 OD2 62.6 REMARK 620 3 GTP B 402 O2G 156.3 93.8 REMARK 620 4 GTP B 402 O2B 90.0 87.8 91.8 REMARK 620 5 HOH B 563 O 99.4 161.9 104.3 89.8 REMARK 620 6 HOH B 571 O 91.4 92.1 86.6 178.4 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 553 O REMARK 620 2 HOH B 774 O 122.8 REMARK 620 3 HOH B 886 O 94.1 113.2 REMARK 620 4 HOH B 914 O 81.7 54.7 83.6 REMARK 620 5 HOH B 922 O 92.5 135.8 87.0 168.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 213 OD2 REMARK 620 2 GTP A 402 O3G 90.2 REMARK 620 3 GTP A 402 O3B 85.4 71.2 REMARK 620 4 GTP A 402 O2A 88.2 163.8 92.6 REMARK 620 5 HOH A 619 O 175.4 93.2 92.8 87.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 213 OD1 REMARK 620 2 ASP A 213 OD2 60.5 REMARK 620 3 GTP A 402 O1G 153.3 93.8 REMARK 620 4 GTP A 402 O1B 92.8 83.1 90.7 REMARK 620 5 HOH A 560 O 99.5 159.1 106.7 92.7 REMARK 620 6 HOH A 579 O 84.0 89.3 89.1 172.4 94.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 220 OD1 REMARK 620 2 HOH A 696 O 124.4 REMARK 620 3 HOH A 720 O 120.0 89.6 REMARK 620 N 1 2 DBREF 7W15 B 1 294 UNP A5Y459 A5Y459_ACIBA 1 294 DBREF 7W15 A 1 294 UNP A5Y459 A5Y459_ACIBA 1 294 SEQADV 7W15 LEU B 295 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 GLU B 296 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS B 297 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS B 298 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS B 299 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS B 300 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS B 301 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS B 302 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 LEU A 295 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 GLU A 296 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS A 297 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS A 298 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS A 299 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS A 300 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS A 301 UNP A5Y459 EXPRESSION TAG SEQADV 7W15 HIS A 302 UNP A5Y459 EXPRESSION TAG SEQRES 1 B 302 MET THR ILE GLN ASP ILE GLN SER LEU ALA GLU ALA HIS SEQRES 2 B 302 GLY LEU LEU LEU THR ASP LYS MET ASN PHE ASN GLU MET SEQRES 3 B 302 GLY ILE ASP PHE LYS VAL VAL PHE ALA LEU ASP THR LYS SEQRES 4 B 302 GLY GLN GLN TRP LEU LEU ARG ILE PRO ARG ARG ASP GLY SEQRES 5 B 302 MET ARG GLU GLN ILE LYS LYS GLU LYS ARG ILE LEU GLU SEQRES 6 B 302 LEU VAL LYS LYS HIS LEU SER VAL GLU VAL PRO ASP TRP SEQRES 7 B 302 ARG ILE SER SER THR GLU LEU VAL ALA TYR PRO ILE LEU SEQRES 8 B 302 LYS ASP ASN PRO VAL LEU ASN LEU ASP ALA GLU THR TYR SEQRES 9 B 302 GLU ILE ILE TRP ASN MET ASP LYS ASP SER PRO LYS TYR SEQRES 10 B 302 ILE THR SER LEU ALA LYS THR LEU PHE GLU ILE HIS SER SEQRES 11 B 302 ILE PRO GLU LYS GLU VAL ARG GLU ASN ASP LEU LYS ILE SEQRES 12 B 302 MET LYS PRO SER ASP LEU ARG PRO GLU ILE ALA ASN ASN SEQRES 13 B 302 LEU GLN LEU VAL LYS SER GLU ILE GLY ILE SER GLU GLN SEQRES 14 B 302 LEU GLU THR ARG TYR ARG LYS TRP LEU ASP ASN ASP VAL SEQRES 15 B 302 LEU TRP ALA ASP PHE THR GLN PHE ILE HIS GLY ASP LEU SEQRES 16 B 302 TYR ALA GLY HIS VAL LEU ALA SER LYS ASP GLY ALA VAL SEQRES 17 B 302 SER GLY VAL ILE ASP TRP SER THR ALA HIS ILE ASP ASP SEQRES 18 B 302 PRO ALA ILE ASP PHE ALA GLY HIS VAL THR LEU PHE GLY SEQRES 19 B 302 GLU GLU SER LEU LYS THR LEU ILE ILE GLU TYR GLU LYS SEQRES 20 B 302 LEU GLY GLY LYS VAL TRP ASN LYS LEU TYR GLU GLN THR SEQRES 21 B 302 LEU GLU ARG ALA ALA ALA SER PRO LEU MET TYR GLY LEU SEQRES 22 B 302 PHE ALA LEU GLU THR GLN ASN GLU SER LEU ILE VAL GLY SEQRES 23 B 302 ALA LYS ALA GLN LEU GLY VAL ILE LEU GLU HIS HIS HIS SEQRES 24 B 302 HIS HIS HIS SEQRES 1 A 302 MET THR ILE GLN ASP ILE GLN SER LEU ALA GLU ALA HIS SEQRES 2 A 302 GLY LEU LEU LEU THR ASP LYS MET ASN PHE ASN GLU MET SEQRES 3 A 302 GLY ILE ASP PHE LYS VAL VAL PHE ALA LEU ASP THR LYS SEQRES 4 A 302 GLY GLN GLN TRP LEU LEU ARG ILE PRO ARG ARG ASP GLY SEQRES 5 A 302 MET ARG GLU GLN ILE LYS LYS GLU LYS ARG ILE LEU GLU SEQRES 6 A 302 LEU VAL LYS LYS HIS LEU SER VAL GLU VAL PRO ASP TRP SEQRES 7 A 302 ARG ILE SER SER THR GLU LEU VAL ALA TYR PRO ILE LEU SEQRES 8 A 302 LYS ASP ASN PRO VAL LEU ASN LEU ASP ALA GLU THR TYR SEQRES 9 A 302 GLU ILE ILE TRP ASN MET ASP LYS ASP SER PRO LYS TYR SEQRES 10 A 302 ILE THR SER LEU ALA LYS THR LEU PHE GLU ILE HIS SER SEQRES 11 A 302 ILE PRO GLU LYS GLU VAL ARG GLU ASN ASP LEU LYS ILE SEQRES 12 A 302 MET LYS PRO SER ASP LEU ARG PRO GLU ILE ALA ASN ASN SEQRES 13 A 302 LEU GLN LEU VAL LYS SER GLU ILE GLY ILE SER GLU GLN SEQRES 14 A 302 LEU GLU THR ARG TYR ARG LYS TRP LEU ASP ASN ASP VAL SEQRES 15 A 302 LEU TRP ALA ASP PHE THR GLN PHE ILE HIS GLY ASP LEU SEQRES 16 A 302 TYR ALA GLY HIS VAL LEU ALA SER LYS ASP GLY ALA VAL SEQRES 17 A 302 SER GLY VAL ILE ASP TRP SER THR ALA HIS ILE ASP ASP SEQRES 18 A 302 PRO ALA ILE ASP PHE ALA GLY HIS VAL THR LEU PHE GLY SEQRES 19 A 302 GLU GLU SER LEU LYS THR LEU ILE ILE GLU TYR GLU LYS SEQRES 20 A 302 LEU GLY GLY LYS VAL TRP ASN LYS LEU TYR GLU GLN THR SEQRES 21 A 302 LEU GLU ARG ALA ALA ALA SER PRO LEU MET TYR GLY LEU SEQRES 22 A 302 PHE ALA LEU GLU THR GLN ASN GLU SER LEU ILE VAL GLY SEQRES 23 A 302 ALA LYS ALA GLN LEU GLY VAL ILE LEU GLU HIS HIS HIS SEQRES 24 A 302 HIS HIS HIS HET ERY B 401 51 HET GTP B 402 32 HET MG B 403 1 HET MG B 404 1 HET MG B 405 1 HET GOL B 406 6 HET GOL B 407 6 HET ERY A 401 51 HET GTP A 402 32 HET MG A 403 1 HET MG A 404 1 HET MG A 405 1 HETNAM ERY ERYTHROMYCIN A HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ERY 2(C37 H67 N O13) FORMUL 4 GTP 2(C10 H16 N5 O14 P3) FORMUL 5 MG 6(MG 2+) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 15 HOH *833(H2 O) HELIX 1 AA1 THR B 2 HIS B 13 1 12 HELIX 2 AA2 MET B 53 LYS B 69 1 17 HELIX 3 AA3 SER B 114 SER B 130 1 17 HELIX 4 AA4 PRO B 132 ASN B 139 1 8 HELIX 5 AA5 LYS B 145 SER B 147 5 3 HELIX 6 AA6 ASP B 148 ILE B 164 1 17 HELIX 7 AA7 SER B 167 ASN B 180 1 14 HELIX 8 AA8 ASP B 181 TRP B 184 5 4 HELIX 9 AA9 TYR B 196 GLY B 198 5 3 HELIX 10 AB1 ALA B 223 GLY B 234 1 12 HELIX 11 AB2 GLY B 234 LEU B 248 1 15 HELIX 12 AB3 LYS B 255 ALA B 266 1 12 HELIX 13 AB4 ALA B 266 GLN B 279 1 14 HELIX 14 AB5 ASN B 280 LEU B 291 1 12 HELIX 15 AB6 THR A 2 HIS A 13 1 12 HELIX 16 AB7 MET A 53 LYS A 69 1 17 HELIX 17 AB8 SER A 114 SER A 130 1 17 HELIX 18 AB9 PRO A 132 ASN A 139 1 8 HELIX 19 AC1 LYS A 145 SER A 147 5 3 HELIX 20 AC2 ASP A 148 ILE A 164 1 17 HELIX 21 AC3 SER A 167 ASN A 180 1 14 HELIX 22 AC4 ASP A 181 TRP A 184 5 4 HELIX 23 AC5 TYR A 196 GLY A 198 5 3 HELIX 24 AC6 ALA A 223 GLY A 234 1 12 HELIX 25 AC7 GLY A 234 LEU A 248 1 15 HELIX 26 AC8 LYS A 255 ALA A 266 1 12 HELIX 27 AC9 ALA A 266 GLN A 279 1 14 HELIX 28 AD1 ASN A 280 GLY A 292 1 13 SHEET 1 AA1 5 ASN B 22 ASN B 24 0 SHEET 2 AA1 5 PHE B 30 LEU B 36 -1 O PHE B 34 N ASN B 22 SHEET 3 AA1 5 GLN B 42 PRO B 48 -1 O TRP B 43 N ALA B 35 SHEET 4 AA1 5 VAL B 86 PRO B 89 -1 O TYR B 88 N LEU B 44 SHEET 5 AA1 5 ILE B 80 SER B 81 -1 N ILE B 80 O ALA B 87 SHEET 1 AA2 2 LEU B 97 LEU B 99 0 SHEET 2 AA2 2 ILE B 106 TRP B 108 -1 O ILE B 107 N ASN B 98 SHEET 1 AA3 2 GLN B 189 ILE B 191 0 SHEET 2 AA3 2 HIS B 218 ASP B 220 -1 O HIS B 218 N ILE B 191 SHEET 1 AA4 2 VAL B 200 ALA B 202 0 SHEET 2 AA4 2 VAL B 208 VAL B 211 -1 O SER B 209 N LEU B 201 SHEET 1 AA5 5 ASN A 22 ASN A 24 0 SHEET 2 AA5 5 PHE A 30 LEU A 36 -1 O PHE A 34 N ASN A 22 SHEET 3 AA5 5 GLN A 42 PRO A 48 -1 O ILE A 47 N LYS A 31 SHEET 4 AA5 5 VAL A 86 PRO A 89 -1 O TYR A 88 N LEU A 44 SHEET 5 AA5 5 ILE A 80 SER A 81 -1 N ILE A 80 O ALA A 87 SHEET 1 AA6 2 LEU A 97 LEU A 99 0 SHEET 2 AA6 2 ILE A 106 TRP A 108 -1 O ILE A 107 N ASN A 98 SHEET 1 AA7 2 GLN A 189 ILE A 191 0 SHEET 2 AA7 2 HIS A 218 ASP A 220 -1 O HIS A 218 N ILE A 191 SHEET 1 AA8 2 VAL A 200 ALA A 202 0 SHEET 2 AA8 2 VAL A 208 VAL A 211 -1 O SER A 209 N LEU A 201 LINK OD2 ASP B 213 MG MG B 403 1555 1555 2.18 LINK OD1 ASP B 213 MG MG B 404 1555 1555 2.14 LINK OD2 ASP B 213 MG MG B 404 1555 1555 2.08 LINK O1G GTP B 402 MG MG B 403 1555 1555 2.14 LINK O3B GTP B 402 MG MG B 403 1555 1555 2.22 LINK O2A GTP B 402 MG MG B 403 1555 1555 1.94 LINK O2G GTP B 402 MG MG B 404 1555 1555 2.04 LINK O2B GTP B 402 MG MG B 404 1555 1555 2.10 LINK MG MG B 403 O HOH B 675 1555 1555 2.11 LINK MG MG B 404 O HOH B 563 1555 1555 2.04 LINK MG MG B 404 O HOH B 571 1555 1555 2.13 LINK MG MG B 405 O HOH B 553 1555 1555 2.00 LINK MG MG B 405 O HOH B 774 1555 1555 2.15 LINK MG MG B 405 O HOH B 886 1555 2646 2.19 LINK MG MG B 405 O HOH B 914 1555 2646 2.51 LINK MG MG B 405 O HOH B 922 1555 1555 1.95 LINK OD2 ASP A 213 MG MG A 403 1555 1555 2.16 LINK OD1 ASP A 213 MG MG A 404 1555 1555 2.21 LINK OD2 ASP A 213 MG MG A 404 1555 1555 2.13 LINK OD1 ASP A 220 MG MG A 405 1555 1555 2.83 LINK O3G GTP A 402 MG MG A 403 1555 1555 2.10 LINK O3B GTP A 402 MG MG A 403 1555 1555 2.18 LINK O2A GTP A 402 MG MG A 403 1555 1555 2.05 LINK O1G GTP A 402 MG MG A 404 1555 1555 2.07 LINK O1B GTP A 402 MG MG A 404 1555 1555 2.08 LINK MG MG A 403 O HOH A 619 1555 1555 2.14 LINK MG MG A 404 O HOH A 560 1555 1555 2.00 LINK MG MG A 404 O HOH A 579 1555 1555 2.17 LINK MG MG A 405 O HOH A 696 1555 1555 2.67 LINK MG MG A 405 O HOH A 720 1555 1555 2.56 CRYST1 84.620 50.278 97.396 90.00 115.41 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011818 0.000000 0.005614 0.00000 SCALE2 0.000000 0.019889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011367 0.00000